节杆菌PJ3降解咔唑和联苯

菌株PJ3经16SrDNA鉴定为节杆菌(Arthrobacter sp.),同源树表明,该菌株与已报道咔唑降解菌株IC177同源关系最近,其次是联苯降解菌株K37和R04。为了明确PJ3菌株对咔唑和联苯的降解能力,在PJ3生长的最适pH值进行优化的基础上,利用分光光度法测定了该菌株在不同浓度咔唑和联苯的矿物培养基中的生长速率以及对咔唑和联苯的降解性能。结果表明,在pH为7、8、9时,PJ3菌株的生长速率一致,而且高于其他pH值的生长速率。在pH为7、咔唑浓度为0.1mg.ml-1的CNFMM培养基中,PJ3菌株生长速度较快,而且15d咔唑的降解率可达到73%。在pH为7、联苯浓度为0.5mg.ml-1的MSB培养基中PJ3菌株生长最好。在0.1和0.5mg.ml-1联苯浓度下,15d对联苯的降解率可达80%～85%。综合评价,PJ3菌株降解咔唑比较适宜的浓度范围应该为0.1～0.2mg.ml-1,降解联苯较适宜的浓度范围为0.1～0.5mg.ml-1。     

Arthrobacter sp.2PR降解2-羟基吡啶动力学及降解特性研究

从辽河口石油污染土壤中筛选到一株能够以2-羟基吡啶作为唯一碳源、氮源和能源进行生长的菌株2PR,基于形态学观察、16S rRNA基因序列分析鉴定菌株2PR属于节杆菌属(Arthrobacter)。菌株2PR生长和降解2-羟基吡啶的最适条件是30℃,pH为7.0。当2-羟基吡啶初始浓度为6.0mg/ml时,120h菌株2PR对2-羟基吡啶的降解效率为94.48%,初始2-羟基吡啶浓度为8.0mg/ml时,156h的降解效率为89.21%。对2-羟基吡啶降解动力学过程进行模拟,结果显示菌株2PR生长和降解过程符合logisitic模型,该模型为环境中2-羟基吡啶的生物降解提供了理论参考。休止细胞反应和中间代谢产物检测表明,菌株2PR在降解2-羟基吡啶的过程中生成了蓝色化合物4,5,4',5'-tetrahydroxy-3,3'-diazadiphenoquinone-(2,2')。推测该菌株降解2-羟基吡啶的途径可能是首先由双加氧酶催化生成2,3,6-三羟基吡啶,后者会自发形成蓝色中间代谢产物,2,3,6-三羟基吡啶发生开环反应,最终被完全降解。菌株2PR是已报道菌株中2-羟基吡啶耐受能力和降解能力最强的菌株,在污染物生物修复方面具有广阔的应用前景。     

节杆菌菌株LZP08X的分离鉴定及其降解苯酚特性

目的:从柳州市某钢铁公司焦化污水处理厂的活性污泥中,筛选分离出高效降解苯酚的菌株,对其进行分类鉴定和苯酚降解特性的研究。方法:采用苯酚为唯一碳源和能源的无机盐培养基,经过富集培养,平板分离,耐受性试验和苯酚降解能力测定。结果:获得一株能高效降解苯酚的菌株,命名为LZP08X,通过形态观察和生理生化特征分析,初步鉴定为节杆菌属(Ar-throbacter sp.)。该菌株降解苯酚的最适条件为:温度35℃,pH 9.0,装液量20%(v/v);其降解苯酚过程符合一级反应动力学方程,在苯酚初始浓度为400mg/L时,于12h内,降解率达99%,降解速率常数K值为0.39,半衰期为1.78h。结论:节杆菌属(Arthrobact-er sp.)菌株LZP08X苯酚降解能力较强,对该菌的继续研究,可使其在含酚工业废水处理的实际应用中起到重要作用。     

微小杆菌(Exiguobacterium sp.)对肉桂酸降解行为

【目的】为有效缓解自毒物质肉桂酸对西瓜等作物生长的危害,从宁夏中卫硒砂瓜连作土壤中分离筛选得到一株高效降解肉桂酸的菌株,研究其基本降解特性。【方法】分离筛选得到一株能有效利用肉桂酸生长的菌株,采用16S r RNA基因序列分析进行菌株鉴定,运用高效液相色谱法和西瓜幼苗生长毒性实验检测降解特性。【结果】从多年西瓜连作土壤中筛选得到一株高效降解肉桂酸的细菌R30,鉴定为Exiguobacterium sp.,其96 h内对肉桂酸的降解率可达99%以上,最适降解温度和p H分别为30°C、p H 7.0。除肉桂酸外,该菌也能够高效降解香豆酸、阿魏酸、苯甲酸等其他酚酸类物质,表现出一定的底物广谱性;检测96 h降解液对西瓜种子萌发直至幼苗生长阶段的影响表明,该菌株可有效缓解肉桂酸对西瓜幼苗的生长抑制作用。【结论】菌株R30在肉桂酸、香豆酸、阿魏酸、苯甲酸等酚酸类物质导致的农作物连作障碍治理领域具有潜在的开发应用价值。     

节杆菌环境适应性的基因组学研究进展

节杆菌分布广泛,能适应多种环境条件,而且多数节杆菌具有营养多功能性,能降解多种环境污染物,因而受到人们的广泛关注。近年来,随着多株节杆菌基因组的测序完成,人们对节杆菌环境适应性的分子机制有了全面的认识。基因组学研究结果表明,节杆菌在σ因子、氧化应激、渗透应激、饥饿应激、温度应激等胁迫应激反应相关基因方面的特点使其能够在多种环境条件下生存。本文挑选部分具有代表性的节杆菌基因组学研究,对其环境适应性的基因组学基础进行综述,以期为利用节杆菌进行环境污染修复提供理论基础,并为其它细菌的环境适应性机制研究提供参考。     

一株对硝基苯胺降解菌Microbacterium sp. PNA8的分离鉴定及其降解条件研究

从污泥中分离得到一株能以对硝基苯胺为唯一碳源、氮源和能源生长的细菌菌株PNA8。经过对其形态特征、生理生化特性、以及16S rRNA序列分析, 该菌株初步鉴定为Microbacterium sp.。进一步研究表明, 菌株PNA8利用对硝基苯胺生长和降解的最适温度和pH分别是30°C和7.0。培养基中添加定量酵母膏有利于菌株的生长及其对对硝基苯胺的降解。最适条件下, 在培养液中添加0.4 g/L酵母膏, 4 d内0.3 mmol/L对硝基苯胺降解率可达100%。     

黄杆菌(Flavobacterium sp.)几丁质酶的纯化和性质

黄杆菌(Flavobacteium sp.)在几丁质的诱导下产生几丁质酶.通过(NH_4)_2SO_4沉淀、DEAE纤维素柱层析、Sephacryl 300柱层析及Sephadex G-75柱层析,从Flavobacterium sp.培养上清液中分离纯化了几丁质酶.SDS-聚丙烯酰胺凝胶电泳(SDS-PAGE)纯度分析表明,纯化后的几丁质酶达到了均一的程度.用SDS-PAGE测得该酶的分子量约45D00道尔顿.该酶水解几丁质的最适pH为 7.0,最适温度为50℃,-20C贮存两年以上仍有活性.水解几丁质的Km值为5.0mg/ml.金属离子对几丁质酶活性影响较大,Ca~(2+) 、Co~(2+)’和Cu~(2+)对酶有激活作用.而NH_4~-、Ba~(2+)、Mg~(2+)、Mn~(2+)对酶有抑制作用.几丁质酶水解几丁质的产物是几丁质二糖.     

牧效黄杆菌对蒽菲芘的降解性能研究

采用定时、定量、逐步提高驯化所用碳源物浓度的方法,以萘为唯一碳源驯化长期被焦化废水污染的泥土浸出液,7周后,平板划线分离出两株黄杆菌FCN1及FCN2。并对这两株菌降解多环芳烃的特性及无机离子对反应的刺激作用进行了研究。结果表明,FCN1及FCN2能降解转化蒽、菲、芘。加入FCN1,反应10h后,蒽、菲、芘去除率分别为84％、69％、80％,而加入FCN2,各物质的去除率分别为76％、40％、71％。反应进行106h,FCN1对蒽、菲、芘所产生的总有机碳（TOC）的去除率分别为70％、54％、69％,而FCN2对相应物的TOC去除率分别为63％、50％、46％。Fe^3 、Mg^2 的加入对FCN1降解多环芳烃有促进作用。     

节杆菌82菌株胆固醇氧化酶的产生条件

苇轩菌82菌株不需胆固醇诱导即可产生大量胞外胆固醇氧化酶。本文比较了该菌株在不同碳源、氮源及不同葡萄糖或玉米浆浓度下的产酶情况。发现该菌株在含较丰富1有机氮培养基中生长三天,产酶活力可超过600 u／L。可提取到分泌至胞外的酶活力占总酶活力的60％。除去上清液的细胞,经Trltun X—100处理后可提出的胞内胆固醇氧化酶活力约占总酶活力的10％。考查了在不同培养条件下,细胞中胆固醇氧化酶渗出率的变化。     

Enzymatic Characterization of an Amine Oxidase from Arthrobacter sp. Used to Measure Phosphatidylethanolamine

Ethanolamine oxidase was screened with the aim of using it to establish a novel enzymatic phosphatidylethanolamine assay. Ethanolamine oxidase activity was detected in the crude extract of Arthrobacter sp., and the enzyme was purified more than 15-fold in three steps with a 54% yield. SDS–PAGE revealed the presence of only one band, which migrated, with an apparent molecular mass of 70 kDa. Biochemical characterization of the enzyme showed phenylethylamine to be the preferred substrate, with the highest kcat/Km value. The primary structure, determined by sequencing the cloned gene, showed a high degree of identity to Cu-containing phenylethylamine oxidase (64%). When heterologously overexpressed in Escherichia coli, the enzyme exhibited only a trace of amine oxidase activity, but high levels of activity emerged after exposure to Cu²⁺, as is typical of recombinant copper amine oxidases. Preliminary application of this enzyme coupled with phospholipase D for determination of phosphatidylethanolamine is also described. This is the first enzymatic method for the measurement of phosphatidylethanolamine.     

二氯喹啉酸降解菌MC-10的筛选、鉴定及其降解特性

【目的】为治理稻-烟轮作田块上茬土壤中二氯喹啉酸残留问题,筛选高效降解细菌菌株。【方法】通过富集培养和选择培养,从常年施用二氯喹啉酸的水稻田中筛选可以降解二氯喹啉酸的细菌;对其进行形态学观察、生理生化特征测定和16S r DNA序列系统发育鉴定。【结果】分离的降解菌株MC-10被鉴定为节杆属菌株(Arthrobacter sp.)。菌株MC-10在5%接种量p H 7、28℃时,对初始浓度为20 mg/L二氯喹啉酸7 d可降解90%以上。该降解菌的最佳降解条件为p H 7、30℃,二氯喹啉酸初始浓度在1-100mg/L间均有良好的降解效果;菌株MC-10在土壤中对二氯喹啉酸同样有良好的降解效果,温室内7 d对二氯喹啉酸污染土壤的修复率可达70%。【结论】菌株MC-10在二氯喹啉酸污染土壤和水质治理中具有潜在的应用前景。     

Degradation of Car Engine Base Oil by Rhodococcus sp. NDKK48 and Gordonia sp. NDKY76A

Two microorganisms (NDKK48 and NDKY76A) that degrade long-chain cyclic alkanes (c-alkanes) were isolated from soil samples. Strains NDKK48 and NDKY76A were identified as Rhodococcus sp. and Gordonia sp., respectively. Both strains used not only normal alkane (n-alkane) but also c-alkane as a sole carbon and energy source, and the strains degraded more than 27% of car engine base oil (1% addition).     

Purification and properties of an endo-inulinase from an Arthrobacter sp.

Extracellular endo-inulinase of Arthrobacter sp. S37 was purified 63-fold, giving a single band on PAGE with activity staining. The Mr was estimated as 75 kDa by SDS-PAGE. The first 31 amino acids of the N-terminal sequence was determined. The endo-inulinase hydrolyzed inulin mainly into inulo-triose (F3), inulo-tetraose (F4) and inulo-pentaose (F5) optimally at pH 7.5 and 50°C. © Rapid Science Ltd. 1998     

阿特拉津降解菌Arthrobacter sp.AG1降解基因研究

菌株Arthrobacter sp. AG1能以4000mg/L的阿特拉津(AT)为唯一碳源、氮源和能源生长。通过设计特异引物从AG1中扩增出阿特拉津氯水解酶基因trzN的全序列,该基因与已报道的trzN基因序列相似性为99%。AG1菌株中含有两个大于100kb的质粒,Southern杂交结果显示trzN和atzB基因均位于其中较大的一个质粒pAG1上。将AG1菌株在LB液体培养基中转接三代后,发现34%的细菌细胞丢失了降解活性,但却未发现丢失质粒,PCR扩增结果表明突变子丢失了trzN基因,但atzB和atzC基因未丢失,说明降解活性的缺失是trzN基因片段从质粒上丢失的结果,表明trzN基因在环境中存在水平转移现象,暗示菌株AG1中的阿特拉津降解基因是基因的水平转移重组的结果。     

Reduction of Hexavalent Chromium by Immobilized Viable Cells of Arthrobacter sp. SUK 1201

Arthrobacter sp. SUK 1201, a potent isolate reported from chromite mine overburden of Orissa, India, has been evaluated for Cr(VI) reduction with immobilized whole cells. For whole-cell immobilization, Ba-alginate was found to be most effective, and the Cr(VI) reduction potential was maximum in minimal salts (MS) medium with cells immobilized in 2% alginate. Fourier transform infrared spectra of depolymerized cells has failed to detect any sign of complexation of Cr(VI) or its reduced products with the cell mass. Reduction efficiency of the beads increased with increase in cell load, but decreased with increase in Cr(VI) concentration in the medium. Glycerol was the most potent electron donor for chromate reduction, followed by glucose and peptone. Optimum pH for Cr(VI) reduction was 7.0, and the process was inhibited by metal ions such as Ni(II), Co(II), Cd(II), Zn(II), and Mn(II) but not by Cu(II) and Fe(III). Similarly, CCCP (carbonyl cyanide-m-chlorophenylhydrazone), DCC (N,N,-dicyclohexylcarbodiimide), sodium azide, and sodium fluoride were inhibitory in nature, whereas chromate reduction was unaffected in the presence of DNP (2,4-dinitrophenol). Moreover, immobilized cells of SUK 1201 remained biologically active for four consecutive cycles, accompanied with an initial increase in cell number in the beads, although a decline in chromate reduction was recorded from the second cycle onward. Immobilized cells of Arthrobacter sp. SUK 1201, therefore, could be a potential tool for long-term uses in chromium detoxification.     

Oxidative Degradation of 4-Hydroxyacetophenone in Arthrobacter sp. TGJ4

The 4-hydroxyacetophenone assimilating bacterium Arthrobacter sp. TGJ4 was isolated from a soil sample. The resting cell reaction suggested that the strain cleaved 4-hydroxyacetophenone and its 3-methoxy derivative to the corresponding carboxylic acids and formaldehyde. Some properties of the enzyme catalyzing the cleavage reaction were examined.     

A novel S-enantioselective amidase acting on 3,3,3-trifluoro-2-hydroxy-2-methylpropanamide from Arthrobacter sp. S-2

A novel S-enantioselective amidase acting on 3,3,3-trifluoro-2-hydroxy-2-methylpropanamide was purified from Arthrobacter sp. S-2. The enzyme acted S-enantioselectively on 3,3,3-trifluoro-2-hydroxy-2-methylpropanamide to yield (S)-3,3,3-trifluoro-2-hydroxy-2-methylpropanoic acid. Based on the N-terminal amino acid sequence of this amidase, the gene coding S-amidase was cloned from the genomic DNA of Arthrobacter sp. S-2 and expressed in an Escherichia coli host. The recombinant S-amidase was purified and characterized. Furthermore, the purified recombinant S-amidase with the C-His₆-tag, which was expressed in E. coli as the C-His₆-tag fusion protein, was used in the kinetic resolution of (±)-3,3,3-trifluoro-2-hydroxy-2-methylpropanamide to obtain (S)-3,3,3-trifluoro-2-hydroxy-2-methylpropanoic acid and (R)-3,3,3-trifluoro-2-hydroxy-2-methylpropanamide.