Urban influences on the nitrogen cycle in Puerto Rico

Anthropogenic actions are altering fluxes of nitrogen (N) in the biosphere at unprecedented rates. Efforts to study these impacts have concentrated in the Northern hemisphere, where experimental data are available. In tropical developing countries, however, experimental studies are lacking. This paper summarizes available data and assesses the impacts of human activities on N fluxes in Puerto Rico, a densely populated Caribbean island that has experienced drastic landscape transformations over the last century associated with rapid socioeconomic changes. N yield calculations conducted in several watersheds of different anthropogenic influences revealed that disturbed watersheds export more N per unit area than undisturbed forested watersheds. Export of N from urban watersheds ranged from 4.8 kg ha^?1 year^?1 in the Río Bayamón watershed to 32.9 kg ha^?1 year^?1 in the highly urbanized Río Piedras watershed and 33.3 kg ha^?1 year^?1 in the rural-agricultural Río Grande de Añasco watershed. Along with land use, mean annual runoff explained most of the variance in fluvial N yield. Wastewater generated in the San Juan Metropolitan Area receives primary treatment before it is discharged into the Atlantic Ocean. These discharges are N-rich and export large amounts of N to the ocean at a rate of about 140 kg ha^?1 year^?1. Data on wet deposition of inorganic N ( $\hbox{NH}_{4}^{+}+\hbox{NO}_{3}^{-}Anthropogenic actions are altering fluxes of nitrogen (N) in the biosphere at unprecedented rates. Efforts to study these impacts have concentrated in the Northern hemisphere, where experimental data are available. In tropical developing countries, however, experimental studies are lacking. This paper summarizes available data and assesses the impacts of human activities on N fluxes in Puerto Rico, a densely populated Caribbean island that has experienced drastic landscape transformations over the last century associated with rapid socioeconomic changes. N yield calculations conducted in several watersheds of different anthropogenic influences revealed that disturbed watersheds export more N per unit area than undisturbed forested watersheds. Export of N from urban watersheds ranged from 4.8 kg ha⁻¹ year⁻¹ in the Río Bayamón watershed to 32.9 kg ha⁻¹ year⁻¹ in the highly urbanized Río Piedras watershed and 33.3 kg ha⁻¹ year⁻¹ in the rural-agricultural Río Grande de A?asco watershed. Along with land use, mean annual runoff explained most of the variance in fluvial N yield. Wastewater generated in the San Juan Metropolitan Area receives primary treatment before it is discharged into the Atlantic Ocean. These discharges are N-rich and export large amounts of N to the ocean at a rate of about 140 kg ha⁻¹ year⁻¹. Data on wet deposition of inorganic N () suggest that rates of atmospheric N deposition are increasing in the pristine forests of Puerto Rico. Stationary and mobile sources of NO _x (NO+NO₂) and N₂O generated in the large urban centers may be responsible for this trend. Comprehensive measurements are required in Puerto Rico to quantitatively characterize the local N cycle. More research is required to assess rates of atmospheric N deposition, N fixation in natural and human-dominated landscapes, N-balance associated with food and feed trade, and denitrification.     

Mediterranean warming triggers seagrass (Posidonia oceanica) shoot mortality

Rapid warming of the Mediterranean Sea threatens marine biodiversity, particularly key ecosystems already stressed by other impacts such as Posidonia oceanica meadows. A 6‐year monitoring of seawater temperature and annual P. oceanica shoot demography at Cabrera Archipelago National Park (Balearic Islands, Western Mediterranean) allowed us to determine if warming influenced shoot mortality and recruitment rates of seagrasses growing in relative pristine environments. The average annual maximum temperature for 2002–2006 was 1 °C above temperatures recorded in 1988–1999 (26.6 °C), two heat waves impacted the region (with seawater warming up to 28.83 °C in 2003 and to 28.54 °C in 2006) and the cumulative temperature anomaly, above the 1988–1999 mean annual maximum temperature, during the growing season (i.e. degree‐days) ranged between 0 °C in 2002 and 70 °C in 2003. Median annual P. oceanica shoot mortality rates varied from 0.067 year^?1 in 2002 to 0.123 year^?1 in 2003, and exceeded recruitment rates in all stations and years except in shallow stations for year 2004. Interannual fluctuations in shoot recruitment were independent of seawater warming (P>0.05). P. oceanica meadows experienced a decline throughout the study period at an average rate of ?0.050±0.020 year^?1. Interannual variability in P. oceanica shoot mortality was coupled (R²>0.40) to seawater warming variability and increasing water depth: shoot mortality rates increased by 0.022 year^?1 (i.e. an additional 2% year^?1) for each additional degree of annual maximum temperature and by 0.001 year^?1 (i.e. 0.1% year^?1) for each accumulated degree water temperature remained above 26.6 °C during the growing season. These results demonstrate that P. oceanica meadows are highly vulnerable to warming, which can induce steep declines in shoot abundance as well indicating that climate change poses a significant threat to this important habitat.     

Screening Perennial Warm-Season Bioenergy Crops as an Alternative for Phytoremediation of Excess Soil P

A recent alternative strategy to reduce environmental problems associated with P transport from agricultural soils is the use of bioenergy crops to remediate excess soil P. In addition to the positive impacts associated with P mitigation, harvested biomass used as a renewable energy source can also offset the cost associated with plant-based P remediation strategies. The objective of this study was to identify potential crop species that can be used for remediation of soil P and as a cellulosic feedstock for production of renewable energy in South Florida. Fifteen crop entries were investigated for their potential to remove P from a P-enriched soil. Dry matter (DM) yield varied among crop species with greatest yield observed for elephantgrass (Pennisetum purpureum Schum.) and sugarcane (Saccharum spp.) (43 and 39 Mg?ha^?1 year^?1, respectively). Similarly, greater P removal rates were observed for elephantgrass (up to 126 kg?P?ha^?1 year^?1 in 2008) followed by sugarcane (62 kg?P?ha^?1 year^?1 in 2008). Although there was no effect (P?=?0.45) of crop species on P reduction in the soil, soil P concentrations decreased linearly during the 3-year study. Because of its relatively greater DM yield and P removal rates, elephantgrass was shown to be a good candidate for remediation of excess soil P in South Florida Spodosols.     

<Emphasis Type="Italic">Sargassum muticum</Emphasis> (Yendo) Fensholt in Ireland: an invasive species on the move

The invasive marine macroalga Sargassum muticum was recorded from Kilmore Quay, Co. Waterford, for the first time in the Republic of Ireland in 2001. It was found at several other places in that year and in subsequent years. An intensive survey was carried out from April 2003 to November 2003 to map the geographical distribution and spread of this invasive brown macroalga, and data on distribution were collected in subsequent years through 2006. This study indicated that S. muticum most probably arrived in the early or mid 1990s and has spread all around the Irish coastline colonising Co. Donegal for the first time in 2006. The results indicate that spreading is facilitated by boating and perhaps via shellfish transport. A rough rate of spread of 2–3 km year⁻¹ has been calculated within one bay and for the Irish coastline of about 54 km year⁻¹. Observations showed that S. muticum has been found growing in seagrass beds and in rock pools, which might have serious consequences for the biodiversity in rock pools and for the protective status of seagrass habitats. It is recommended that monitoring of S. muticum should continue, especially in areas of high amenity value and economic importance in order to observe possible effects on local flora and fauna, aquaculture, the seaweed industry and tourism.     

Harmonia axyridis in Great Britain: analysis of the spread and distribution of a non-native coccinellid

Harmonia axyridis (Pallas) (Coleoptera: Coccinellidae) is native to Asia, and was widely introduced as a biocontrol agent of aphids and coccids in Europe and North America. In Europe H. axyridis is considered to be an invasive alien species. Although not known to have been deliberately introduced to Great Britain, it was first recorded there in 2004, in south-east England. Harmonia axyridis arrived in Great Britain by various means, primarily from mainland Europe, but also from Canada. Extensive national and local media coverage, and a dedicated website (), facilitated public involvement in recording H. axyridis in Great Britain; in excess of 4,000 verified records of the species were received between 2004 and 2006. Through detailed mapping, the objective of our study was to quantify and analyse the spread of H. axyridis in its early stages of invasion in Great Britain. Our data shows that between 2004 and 2006, the species spread north through Great Britain at the rate of 58 km year^-1 and west at the rate of 144.5 km year^-1. In England H. axyridis spread north to Yorkshire and west to Cornwall by the end of 2006, and also reached Wales. Recorded occurrence (of one or more H. axyridis individuals at larval, pupal and/or adult stage) in 10 km squares in Great Britain was: 2004—51; 2005—149; 2006—447. Records of juvenile H. axyridis extend through most of the recorded British range of the species, and we present evidence of bi-voltinism in the population in 2006.     

Are corals coming to a reef near you? Projected extension of suitable thermal conditions for hard coral communities along the east Australian coast

Climate change is driving the poleward redistribution of coral species, but the rate and magnitude of future range extensions within temperate regions are rarely quantified. A better understanding of the likely future distribution of corals is needed to anticipate the resulting social, economic and environmental implications. Here, we project the rate and magnitude of extensions of suitable thermal conditions for hard coral communities along the east Australian coastline, using data on coral community presence, in conjunction with historical and projected ocean temperatures. Our projections indicate that temperatures will be suitable for coral communities dominated by the subtropical coral Pocillopora aliciae, currently found off Sydney, to extend their range poleward by 80 (RCP 2.6) to 450 km (RCP 8.5) by 2100, corresponding to a rate of 0.9–5.0 km year⁻¹. Similarly, thermal conditions will be such that diverse coral communities, such as those currently occurring in the Solitary Islands, may extend their range by 130 (RCP 2.6) to 580 km (RCP 8.5) by 2100, at a rate of 1.4–6.4 km year⁻¹. These projections are similar to those forecast for coral species in other parts of the world. Newly establishing coral communities in temperate regions may provide a range of novel local economic opportunities, particularly for marine tourism.     

Innocent invaders? A preliminary assessment of Cecropia,an American tree,in Java

Background: Invasive alien species receive little attention in many tropical countries.

Aims: We examine the Neotropical tree genus Cecropia in West Java and ask how eradication decisions should be judged given limited resources.

Methods: The distribution was determined based on field searches. The history, impacts and perceptions of Cecropia were examined through official records, observations, interviews and published literature.

Results : At least four Cecropia species were planted in the Bogor Botanic Gardens, West Java Province, Indonesia, during the twentieth century but only C. peltata appears to have naturalised extensively. Since 1943 Cecropia has spread over 1290 km². Implied mean rates of spread range from 0.13 km year^?1 to 0.68 km year^?1, with the fastest rates occurring down-slope and along river valleys. It has reached Jakarta to the north and the Mount Gede-Pangrango National Park to the south. It occurs only in open and disturbed locations. Local farmers consider Cecropia only a minor nuisance. We review 15 other reports of Cecropia naturalised outside the Neotropics.

Conclusions: Without control, Cecropia may eventually become common throughout Java. There is no evidence that any serious problem will, or will not result. We call for the development and implementation of low-cost and decisive assessment procedures for evaluating the control and management of naturalised organisms.     

Dynamic patch mosaics and channel movement in an unconfined river valley of the Olympic Mountains

1. River valleys resemble dynamic mosaics, composed of patches which are natural, transient features of the land surface produced by the joint action of a river and successional processes over years to centuries. They simultaneously regulate and reflect the distribution of stream energy and exchanges of sediment, wood and particulate organic matter between riparian and aquatic environments. 2. We determined the structure, composition, dynamics and origin of seven patch types at the reach scale in the Queets River valley in the temperate coastal forests of the Olympic Mountains, Washington (U.S.A.). Patch types included: (1) primary and (2) secondary channels; (3) pioneer bars; (4) developing and (5) established floodplains; and (6) transitional and (7) mature fluvial terraces. 3. Lateral channel movements strongly shape patch distribution, structure and dynamics. The primary channel moved laterally 13 m year^?1, on average from 1939 to 2002, but was highly variable among locations and over time. Mean lateral movement rates ranged from 1 to 59 m year^?1 and moving averages (2 km) ranged from 3 to 28 m year^?1 throughout the valley. 4. Each patch type exhibited characteristic vegetation, soil and accumulations of large wood. Pioneer bars contained peak stem density (69 778 stems ha^?1) and volume of large wood (289 m³ ha^?1). Mature fluvial terraces contained the highest mean stem (1739 m³ ha^?1) and canopy volume (158 587 m³ ha^?1). These patches also contained the most soil nitrogen (537 kg ha^?1) and carbon (5972 kg ha^?1). 5. Patch half‐life (the time required for half of the existing patches to be eroded) ranged from 21 to 401 years among forested patch types. Erosion rates were highest in pioneer bars (2.3% year^?1) and developing floodplains (3.3% year^?1), compared with only 0.17% year^?1 in mature fluvial terraces. New forests formed continually, as pioneering vegetation colonised 50% of the channel system within 18 years, often unsuccessfully. 6. In the Queets River, the structure, composition, and dynamics of the patchy riparian forest depends on the interplay between channel movements and biophysical feedbacks between large wood, living vegetation and geomorphic processes. The cycle of patch development perpetuates a shifting‐mosaic of habitats within the river valley capable of supporting diverse biotic assemblages.     

Modelling the spread of Fagus sylvatica and Picea abies in southern Scandinavia during the late Holocene

Aim To test the hypothesis that dispersal characteristics alone can explain the past migration patterns of Fagus sylvatica and Picea abies observed in southern Scandinavia. Location Scandinavia, Europe. Methods The spreading dynamics of both species were analysed using a quantitative data–model comparison approach. Pollen data recording the arrival of the two species at 24 small forest‐hollow sites distributed across the study area were compared with simulated arrival times. The simulations were based on diffusive spread combined with long‐distance dispersal events. By systematically applying different parameter combinations yielding the desired colonization speeds we could identify values for the long‐distance dispersal component that minimized deviations from the observed arrival times. Results According to the minimization process, the optimal spreading rates were 100 m year^?1 for F. sylvatica and 250 m year^?1 for P. abies. Simulated dispersal alone could adequately explain the wave‐like spread of P. abies but failed to explain the scattered establishment pattern observed for F. sylvatica in Scandinavia. At the fine scale of stand establishment, local microclimatic conditions or site disturbance might be more important. The estimated spreading rates are high because the species colonized Scandinavia from different geographic directions and the rates slowed when their ranges overlapped. We present new estimates for the distance and frequency of long‐distance dispersal events for our modelled species. Main conclusions Our analyses suggest that the late Holocene spread of P. abies in Scandinavia was fairly rapid and was limited only by biological processes of dispersal, while that of F. sylvatica was limited by other factors probably controlled by site properties. Picea abies has maintained a rapid and constant rate of spread throughout at least the last 4000 years, despite significant changes in climate. There is uncertainty about the precise relationship between P. abies and climate in Scandinavia, so future distributions are not easy to forecast. For F. sylvatica in Scandinavia, site quality appears to have been a limiting factor, so future land use is likely to dictate its future distribution dynamics in combination with climatic factors.     

Recent Increases in Sediment and Nutrient Accumulation in Bear Lake, Utah/Idaho, USA

This study examines historical changes in sediment and nutrient accumulation rates in Bear Lake along the northeastern Utah/Idaho border, USA. Two sediment cores were dated by measuring excess ²¹⁰Pb activities and applying the constant rate of supply (CRS) dating model. Historical rates of bulk sediment accumulation were calculated based on the ages within the sediment cores. Bulk sediment accumulation rates increased throughout the last 100 years. According to the CRS model, bulk sediment accumulation rates were <25mgcm^?2year^?1 prior to 1935. Between 1935 and 1980, bulk sediment accumulation rates increased to approximately 40mgcm^?2year^?1. This increase in sediment accumulation probably resulted from the re-connection of Bear River to Bear Lake. Bulk sediment accumulation rates accelerated again after 1980. Accumulation rates of total phosphorus (TP), total nitrogen (TN), total inorganic carbon (TIC), and total organic carbon (TOC) were calculated by multiplying bulk sediment accumulation rates times the concentrations of these nutrients in the sediment. Accumulation rates of TP, TN, TIC, and TOC increased as a consequence of increased bulk sediment accumulation rates after the re-connection of Bear River with Bear Lake.     

Role of coral reefs in global ocean production

Coral reefs cover some 600 thousand square kilometres of the earth's surface (0.17% of the ocean surface). First order estimates show coral reefs to contribute about 0.05% of the estimated net CO₂ fixation rate of the global oceans. Gross CO₂ fixation is relatively high (of the order 700×10¹² g C year^-1), but most of this material is recycled within the reefs. Excess (net) production of organic material (E) is much smaller, of the order 20×10¹² g C year^-1. We estimate that 3×10¹² g C year^-1 (15% ofE) is buried in reef structure, 2×10¹² g C year^-1 (10% ofE) is available for sustained human harvest, and the remaining 75% ofE is available for export from coral reefs to adjacent areas. Comparison of estimates for net production by reefs and their surrounding oceans indicates that the excess production by coral reefs is similar to new production in the photic zone of oligotrophic oceans. Consequently, estimates for global ocean production should as a first approximation include reefal areas with the surrounding ocean when assigning average net production rates. While there are significant uncertainties in these numbers, it can be concluded that organic production by reefs plays a relatively minor role in the global scale of fluxes and storage of elements. In comparison, the companion process of biologically-mediated inorganic carbon precipitation represents a major role for reefs. While reef production does respond on local scales to variation in ocean climate, neither the absolute rates nor the amount accumulated into organic pools appear to be either sensitive indicators or accurate recorders of climatic change in most reef systems. Similarly, the productivity of most reefs should be little affected by currently predicted environmental changes resulting from the Greenhouse effect.Authorship sequence does not imply seniority, it is deliberately alphabetical     

Partitioning of river metabolism identifies phytoplankton as a major contributor in the regulated Murray River (Australia)

1. River metabolism was measured over an annual cycle at three sites distributed along a 1000 km length of the lowland Murray River, Australia. 2. Whole system metabolism was measured using water column changes in dissolved oxygen concentrations while planktonic and benthic metabolism were partitioned using light‐dark bottles and benthic chambers. 3. Annual gross primary production (GPP) ranged from 775 to 1126 g O₂ m^?2 year^?1 which in comparison with rivers of similar physical characteristics is moderately productive. 4. Community respiration (CR) ranged from 872 to 1284 g O₂ m^?2 year^?1 so that annual net ecosystem production (NEP) was near zero, suggesting photosynthesis and respiration were balanced and that allochthonous organic carbon played a minor role in fuelling metabolism. 5. Planktonic rates of gross photosynthesis and respiration were similar to those of the total channel, indicating that plankton were responsible for much of the observed metabolism. 6. Respiration rates correlated with phytoplankton standing crop (estimated as the sum of GPP plus the chlorophyll concentration in carbon units), yielding a specific respiration rate of ?1.1 g O₂ g C^?1 day^?1. The respiration rate was equivalent to 19% of the maximum rate of phytoplankton photosynthesis, which is typical of diatoms. 7. The daily GPP per unit phytoplankton biomass correlated with the mean irradiance of the water column giving a constant carbon specific photon fixation rate of 0.35 gO₂ g Chl a^?1 day^?1 per μmole photons m^?2 s^?1 (ca. 0.08 per mole photons m^?2 on a carbon basis) indicating that light availability determined daily primary production. 8. Annual phytoplankton net production (NP) estimates at two sites indicated 25 and 36 g C m^?2 year^?1 were available to support riverine food webs, equivalent to 6% and 11% of annual GPP. 9. Metabolised organic carbon was predominantly derived from phytoplankton and was fully utilised, suggesting that food‐web production was restricted by the energy supply.     

Survival and movement patterns of central California coast native steelhead trout (Oncorhynchus mykiss) in the Napa River

Drawing on acoustic telemetry this study identifies and describes local and regional scale survival and movement patterns of Central California Coast steelhead (Oncorhynchus mykiss), including their potential utilization of newly restored tidal marsh habitats in the Napa River system. Between April 8th and May 5th of 2010, 20 steelhead smolts ranging in fork length from 164 to 305 mm were collected, tagged with acoustic transmitters, and released in the upper Napa River (above tidal influence). We found no effect of release date (P?<?0.001) or size (P?<?0.005) on survival estimates based on model likelihoods. Cumulative survival from smolt release location to the Golden Gate Bridge over approximately 77 river kilometers (RKM) was 0.60 (SE?=?0.16). Reach-specific survival was lowest in the initial 30 km reach (0.70 SE?=?0.1). Survival was higher in San Pablo Bay (0.89 SE?=?0.1) and San Francisco Bay (0.96 SE?=?0.2). Sixty percent of the fish that entered the ocean were detected on a line of acoustic monitors at Point Reyes approximately 60 km north of the Golden Gate. Average movement rates of smolts were highest in San Pablo Bay (36.6 km?d^-1 SE?=?3.3) and San Francisco Bay (28.9 km?d^-1 SE?=?6.6). Smolts migrated more slowly in the river (9.0 km?d^-1 SE?=?0.9) and ocean (4.1 km?d^-1 SE?=?1.2). However, smolt movement rates in the river were dependent on location. Average movement rates of smolts were greatest shortly before their exit from the Napa River (83 km?d^-1 SE?=?13.2). Fish were not detected within the recently reconnected former salt production ponds (North, Central, and South units) adjacent to the Napa River. Based on the detection patterns of fish throughout the study area, it appears that most fish were moving at relatively high rates and were not exploring off-channel habitat.     

Secondary spread of invasive species: historic patterns and underlying mechanisms of the continuing invasion of the European rockweed Fucus serratus in eastern North America

Post-establishment spread of invasive species is a major determinant of their impact, but the spatial pattern and temporal rhythm of secondary spread are often poorly known or understood. Here we examine the spread of the European rockweed Fucus serratus over 1,500 km of shoreline after its initial discovery in Pictou, Nova Scotia (Canada) in 1868. Building upon earlier periodic surveys, we document the current distribution of this invader and provide a historic analysis of the invasion, including the integration of the recently-detected multiple introductions from Europe. The initial spread was rapid in the southern Gulf of St. Lawrence (6.0 km year⁻¹), likely due to both natural spread in a favorable environment and the extensive regional shipping traffic at the time which linked Pictou to several key ports in eastern Canada and northeast USA. Later spread, especially along the Atlantic coast of Nova Scotia, was slower (recently 0.9 km year⁻¹), but included several major jumps (~50–500 km), undoubtedly due to human-mediated transport. Although the spatial extent of the invasion has increased over the past 140 years, it has experienced several remarkable events: apparent local extinctions of northern satellite populations, a major retraction (100–150 km) along the northwestern limits of its continuous range, and stalled invasions at several points and times during its southward progression. Distributional data suggest that this invader is excluding congeners in shallow zones and possibly kelp species in deeper zones. Genetic data from one contact zone showed hybridization with native F. distichus but no evidence for introgression in migrating F. serratus. Hybridization and several other reproductive traits likely contribute to the competitive dominance of the invader in this environment.     

Evapotranspiration at the land/water interface in a semi-arid drainage basin

1. Evapotranspiration (ET) is a major source of water depletion from riverine systems in arid and semiarid climates. Water budgets have produced estimates of total depletions from riparian vegetation ET for a 320‐km reach of the Middle Rio Grande, New Mexico, U.S.A., that have ranged from 20 to 50% of total depletions from the river. 2. Tower‐based micrometeorological measurements of riparian zone ET throughout the growing season using three‐dimensional eddy covariance provided high quality estimates of ET at the stand scale. 3. A dense stand of salt cedar (111–122 cm year^–1) and a mature cottonwood (Populus deltoides ssp. wislizenia Eckenwelder) stand with an extensive understory of salt cedar (Tamaria ramosissima Ledeb) and Russian olive (Eleagnus angustifolia L.) (123 cm year^–1) had the highest rates of annual ET. A mature cottonwood stand with a closed canopy had intermediate rates of ET (98 cm year^–1). A less dense salt cedar stand had the lowest rates of ET (74–76 cm year^–1). 4. Summer leaf area index (LAI) measurements within the four stands were positively correlated with daily ET rates. LAI measurements throughout the growing season coupled to riparian vegetation classification is a promising method for improving riverine corridor estimates of total annual riparian zone ET along a reach of river. 5. Combining recent estimates of the extent of riparian vegetation along the 320 km length of the Middle Rio Grande, from Landsat 7 imagery with annual growing season measurements of ET at the four riparian stands yields a first‐order riverine corridor estimate of total riparian zone ET of 150–250 × 10⁶ m³ year^–1. This is approximately 20–33% of total estimated depletions along this reach of river.     

Linking Belowground Carbon Allocation to Anaerobic CH4 and CO2 Production in a Forested Peatland,New York State

Heterotrophic soil microorganisms rely on carbon (C) allocated belowground in plant production, but belowground C allocation (BCA) by plants is a poorly quantified part of ecosystem C cycling, especially, in peat soil. We applied a C balance approach to quantify BCA in a mixed conifer-red maple (Acer rubrum) forest on deep peat soil. Direct measurements of CH₄ and CO₂ fluxes across the soil surface (soil respiration), production of fine and small plant roots, and aboveground litterfall were used to estimate respiration by roots, by mycorrhizae and by free-living soil microorganisms. Measurements occurred in two consecutive years. Soil respiration rates averaged 1.2 bm μmol m^{? 2} s^{? 1} for CO₂ and 0.58 nmol m^{? 2} s^{? 1} for CH₄ (371 to 403 g C m^{? 2} year^{? 1}). Carbon in aboveground litter (144 g C m^{? 2} year^{? 1}) was 84% greater than C in root production (78 g C m^{? 2} year^{? 1}). Complementary in vitro assays located high rates of anaerobic microbial activity, including methanogenesis, in a dense layer of roots overlying the peat soil and in large-sized fragments within the peat matrix. Large-sized fragments were decomposing roots and aboveground leaf and twig litter, indicating that relatively fresh plant production supported most of the anaerobic microbial activity. Respiration by free-living soil microorganisms in deep peat accounted for, at most, 29 to 38 g C m^{? 2} year^{? 1}. These data emphasize the close coupling between plant production, ecosystem-level C cycling and soil microbial ecology, which BCA can help reveal.     

Tree species impact the terrestrial cycle of silicon through various uptakes

The quantification of silicon (Si) uptake by tree species is a mandatory step to study the role of forest vegetations in the global cycle of Si. Forest tree species can impact the hydrological output of dissolved Si (DSi) through root induced weathering of silicates but also through Si uptake and restitution via litterfall. Here, monospecific stands of Douglas fir, Norway spruce, Black pine, European beech and oak established in identical soil and climate conditions were used to quantify Si uptake, immobilization and restitution. We measured the Si contents in various compartments of the soil–tree system and we further studied the impact of the recycling of Si by forest trees on the DSi pool. Si is mainly accumulated in leaves and needles in comparison with other tree compartments (branches, stembark and stemwood). The immobilization of Si in tree biomass represents less than 15% of the total Si uptake. Annual Si uptake by oak and European beech stands is 18.5 and 23.3 kg ha^?1 year^?1, respectively. Black pine has a very low annual Si uptake (2.3 kg ha^?1 year^?1) in comparison with Douglas fir (30.6 kg ha^?1 year^?1) and Norway spruce (43.5 kg ha^?1 year^?1). The recycling of Si by forest trees plays a major role in the continental Si cycle since tree species greatly influence the uptake and restitution of Si. Moreover, we remark that the annual tree uptake is negatively correlated with the annual DSi output at 60 cm depth. The land–ocean fluxes of DSi are certainly influenced by geochemical processes such as weathering of primary minerals and formation of secondary minerals but also by biological processes such as root uptake.     

Bacterial production in the carbon flow of a central European stream, the Breitenbach

1. Over the last 30 years, many investigations have been performed on the dynamics of bacteria and organic matter in the Breitenbach, a first‐order stream in central Germany. The data now available allow a synthesis of the role of bacteria in the carbon budget, as an example of the general importance of bacteria in stream ecosystems. 2. Comparing measured and estimated inputs and outputs to the ecosystem, the organic matter budget of the Breitenbach is fairly balanced: 1.84 kg C m^?2 year^?1 (sum of inputs) versus 1.88 kg C m^?2 year^?1 (sum of outputs). No major missing link remains. 3. The basis of the food web in the Breitenbach is mainly allochthonous organic matter (dissolved and particulate 1.02 and 0.42 kg C m^?2 year^?1, respectively). Autochthonous gross primary production is 0.4 kg C m^?2 year^?1. Most of the organic matter leaves the stream via transport to the River Fulda (dissolved and particulate 0.74 and 0.34 kg C m^?2 year^?1, respectively), the rest by respiration (0.80 kg C m^?2 year^?1 or 43% of total outputs). 4. Bacteria constitute an important part (36%) of heterotrophic biomass (average: 0.004 kg m^?2 bacterial C of 0.011 kg m^?2 total heterotrophic C). Bacteria also account for the major fraction (71%) of heterotrophic production: 0.20 of 0.28 kg C m^?2 year^?1 total heterotrophic production. Bacterial production in the Breitenbach is similar in magnitude to the estimate of photoautotrophic net primary production: both approximately 0.20 kg C m^?2 year^?1. 5. Protozoa, the main consumers of bacteria in the Breitenbach, consume approximately one‐third of bacterial production (0.07 kg C m^?2 year^?1). Small metazoa (meiofauna, <0.5 mm) play a lesser role in the consumption of bacteria, consuming <0.01 kg bacterial C m^?2 year^?1. Larger metazoa (macrofauna, >0.5 mm) consume approximately 10% of bacterial production. Although this is a considerable amount of the carbon resources needed by the macrofauna (0.02 kg C m^?2 year^?1 of bacterial production versus 0.06 kg C m^?2 year^?1 macrofauna production plus respiration), the carbon demand of the macrofaunal community is met to a larger extent by particulate organic matter than by bacteria. 6. Bacteria are the main decomposers in the Breitenbach. They account for 78% of heterotrophic respiration (0.47 of 0.60 kg C m^?2 year^?1) and 59% of total respiration (0.47 of 0.80 kg C m^?2 year^?1).     

Carbon cycling and net ecosystem production at an early stage of secondary succession in an abandoned coppice forest

Secondary mixed forests are one of the dominant forest cover types in human-dominated temperate regions. However, our understanding of how secondary succession affects carbon cycling and carbon sequestration in these ecosystems is limited. We studied carbon cycling and net ecosystem production (NEP) over 4 years (2004–2008) in a cool-temperate deciduous forest at an early stage of secondary succession (18 years after clear-cutting). Net primary production of the 18-year-old forest in this study was 5.2 tC ha^?1 year^?1, including below-ground coarse roots; this was partitioned into 2.5 tC ha^?1 year^?1 biomass increment, 1.6 tC ha^?1 year^?1 foliage litter, and 1.0 tC ha^?1 year^?1 other woody detritus. The total amount of annual soil surface CO₂ efflux was 6.8 tC ha^?1 year^?1, which included root respiration (1.9 tC ha^?1 year^?1) and heterotrophic respiration (RH) from soils (4.9 tC ha^?1 year^?1). The 18-year forest at this study site exhibited a great increase in biomass pool as a result of considerable total tree growth and low mortality of tree stems. In contrast, the soil organic matter (SOM) pool decreased markedly (?1.6 tC ha^?1 year^?1), although further study of below-ground detritus production and RH of SOM decomposition is needed. This young 18-year forest was a weak carbon sink (0.9 tC ha^?1 year^?1) at this stage of secondary succession. The NEP of this 18-year forest is likely to increase gradually because biomass increases with tree growth and with the improvement of the SOM pool through increasing litter and dead wood production with stand development.     

Saltcedar (Tamarix ramosissima) invasion alters organic matter dynamics in a desert stream

1. We investigated the impacts of saltcedar invasion on organic matter dynamics in a spring‐fed stream (Jackrabbit Spring) in the Mojave Desert of southern Nevada, U.S.A., by experimentally manipulating saltcedar abundance. 2. Saltcedar heavily shaded Jackrabbit Spring and shifted the dominant organic matter inputs from autochthonous production that was available throughout the year to allochthonous saltcedar leaf litter that was strongly pulsed in the autumn. Specifically, reaches dominated by saltcedar had allochthonous litter inputs of 299 g ash free dry mass (AFDM) m^?2 year^?1, macrophyte production of 15 g AFDM m^?2 year^?1 and algal production of 400 g AFDM m^?2 year^?1, while reaches dominated by native riparian vegetation or where saltcedar had been experimentally removed had allochthonous litter inputs of 7–34 g AFDM m^?2 year^?1, macrophyte production of 118–425 g AFDM m^?2 year^?1 and algal production of 640–900 g AFDM m^?2 year^?1. 3. A leaf litter breakdown study indicated that saltcedar also altered decomposition in Jackrabbit Spring, mainly through its influence on litter quality rather than by altering the environment for decomposition. Decomposition rates for saltcedar were lower than for ash (Fraxinus velutina), the dominant native allochthonous litter type, but faster than for bulrush (Scirpus americanus), the dominant macrophyte in this system.