A Record of the Cubed Snailfish, <Emphasis Type="Italic">Liparis tessellatus</Emphasis> (Pisces: Liparidae), in Peter the Great Bay,Sea of Japan

A specimen of the cubed snailfish, Liparis tessellatus was captured in Peter the Great Bay, Sea of Japan. The capture of L. tessellatus from this area a century after the first record is evidence that at present this species still inhabits Peter the Great Bay.Original Russian Text Copyright © 2005 by Biologiya Morya, Sokolovskii, Sokolovskaya.     

Gnathia gurjanovae sp. n., a new species of Gnathiids (Isopoda: Gnathiidae) from Peter the Great Bay, Sea of Japan

A new species of isopods of the suborder Gnathiidae, Gnathia gurjanovae sp. n. has been described from Peter the Great Bay, Sea of Japan. The new species is most similar to G. derzhavini Gurjanova, 1933, but differs from the latter in a series of morphological characteristics of the male: frontal margin of the head bears a well-pronounced mediofrontal process; each mandible has an unarmed carina and an obscure tooth; pereopod 6 is relatively smooth; the basis, ischium, and merus of pereopod 4 bear strong spurlike processes.     

Fauna of Sponges (Porifera) of Peter the Great Bay,Sea of Japan

A complete list of sponges of Peter the Great Bay (northwestern Sea of Japan) is presented comprising 40 species belonging to 27 genera, 19 families, 9 orders, and 2 classes. Information is presented about the biogeographical composition of sponge fauna of the bay, the depths of their habitats, and their substrates.Original Russian Text Copyright ¢ 2005 by Biologiya Morya, Khodakovskaya.     

Assessment of the state of the Japanese scallopMizuhopecten yessoensis in Alekseeva Bight (Peter the Great Bay, Sea of Japan) based on morphological and biochemical parameters

The results of an integrated examination of the state of the scallopMizuhopecten yessoensis in Alekseeva Bight (Peter the Great Bay, Sea of Japan) are presented. In mollusks of different ages, shell height was measured; in animals of commercial size (over 100 mm), some size and weight characteristics (annual increment of shell and adductor muscle and soft tissue weight) were determined. The morphology of the digestive gland and gills was studied. In the adductor muscle and digestive gland, the concentration of heavy metals (HMs) (Hg, Cu, Zn, Mn, Pb, Cd, Ni, Co, and Cr) was determined. In the digestive gland, metallothionein and reduced glutathione concentration was also determined, as was the activity of glutathione-dependent enzymes (glutathione peroxidase and glutathione reductase). In scallops collected outside Alekseeva Bight, the linear growth rate and adductor muscle weight were on average 1.3 and 1.7 times greater, respectively, than in those collected in the bight. In scallop organs, numerous histomorphological alterations were revealed: digestive cell vacuolization and hemocyte infiltration of the digestive gland, hyperplasia and vacuolization of the respiratory epithelium, and connective tissue hypertrophy in gill filaments. The biochemical parameters of scallops from Alekseeva Bight differed substantially from those of mollusks collected outside the bight. We conclude that one of the factors negatively affecting the state of theM. yessoensis population in Alekseeva Bight is the contamination of the bight with HMs, especially mercury. This is consistent with the results of chemical analysis of bottom sediments and tissues of two mytilid species,Modiolus kurilensis andCrenomytilus grayanus, specimens of which were collected in the bight together with the scallops [3].     

A Finding of the Crab Planes marinus Rathbun, 1914 (Decapoda: Grapsidae) in Peter the Great Bay,Sea of Japan

A crab Planes marinus Rathbun, 1914 was found on a drifting buoy in Peter the Great Bay (Sea of Japan). The crab probably arrived in the bay with subtropical waters penetrating into this area during the summer period.     

Paguristes ortmanni Miyake, 1978 (Decapoda: Anomura)—A new genus and species of decapods for the Russia region

Specimens of Paguristes ortmanni Miyake, 1978 were found in August 2004 in Vostok and Wrangel bays (Peter the Great Bay, Sea of Japan) during sample collection for embryological studies. This is the first record of the species Paguristes for the seas of Russia.     

Finding of the Hydromedusa Hydractinia minima (Trinci, 1903) (Cnidaria: Hydrozoa: Hydractiniidae) in Peter the Great Bay, Sea of Japan

The first finding of the hydromedusa Hydractinia minima (Trinci, 1903) in plankton of Peter the Great Bay (Sea of Japan) is reported. The hydromedusae are 0.24–0.51 mm in bell diameter and 0.25–0.53 mm in height. The size characteristics of the nematocysts of this species (desmonemes and microbasic euryteles) are given. H. minima is present in the plankton of Peter the Great Bay from June through October at water temperatures of 16.4 to 22°C with the highest mean monthly density of 151 ind./m³. The finding of H. minima in Peter the Great Bay extends the area of this species in the North Pacific to the low-boreal subzone.Original Russian Text Copyright © 2005 by Biologiya Morya, Chaplygina, Dautova.     

First Record of Tropical Crabs <Emphasis Type="Italic">Portunus sanguinolentus</Emphasis> (Herbst, 1783) and <Emphasis Type="Italic">Plagusia depressa tuberculata</Emphasis> Lamarck, 1818 in Peter the Great Bay,Sea of Japan

Crabs Portunus sanguinolentus (Herbst, 1783) and Plagusia depressa tuberculata Lamarck, 1818 were found in Peter the Great Bay (Sea of Japan) on a drifting buoy. The occurrence of the members of tropical fauna along the coast of Primorye was due, in all likelihood, to the enlargement of the amount of anthropogenic garbage transported with sea currents that serves as a substrate for settlement of different marine organisms.Original Russian Text Copyright © 2005 by Biologiya Morya, Kepel, Tsareva.     

Morphometric characteristic of sex cells and seasonal changes of female gonads of Cucumaria japonica (Semper, 1868) (Echinodermata: Holothuroidea) from Peter the Great Bay, Sea of Japan

The oocytes at different stages of development were characterized morphometrically, and seasonal changes in female gonads of the Far-eastern edible holothurian Cucumaria japonica (Semper, 1868) from the Peter the Great Bay were described. Groups of oocytes and categories of sexual tubules corresponding to different stages of development of gonads were distinguished. Free laying oocytes were divided into several groups, i.e., oocytes 3, 4 and 5. The greatest size of C. japonica oocytes was 460 μm. In various seasons of the year there was greater growth of oocytes in the gonads, which reached its maximum volume during reproduction of the holothurians. The gonads developed asynchronously. All the stages of development were observable simultaneously in the gonads of each individual of this species during the reproductive cycle, and the stage of fast growth prevailed. C. japonica spawned twice a year, in May–June and from July to October. Unreleased oocytes were subjected to resorption.     

Refugial isolation and divergence in the Narrowheaded Gartersnake species complex (Thamnophis rufipunctatus) as revealed by multilocus DNA sequence data

Glacial–interglacial cycles of the Pleistocene are hypothesized as one of the foremost contributors to biological diversification. This is especially true for cold‐adapted montane species, where range shifts have had a pronounced effect on population‐level divergence. Gartersnakes of the Thamnophis rufipunctatus species complex are restricted to cold headwater streams in the highlands of the Sierra Madre Occidental and southwestern USA. We used coalescent and multilocus phylogenetic approaches to test whether genetic diversification of this montane‐restricted species complex is consistent with two prevailing models of range fluctuation for species affected by Pleistocene climate changes. Our concatenated nuDNA and multilocus species analyses recovered evidence for the persistence of multiple lineages that are restricted geographically, despite a mtDNA signature consistent with either more recent connectivity (and introgression) or recent expansion (and incomplete lineage sorting). Divergence times estimated using a relaxed molecular clock and fossil calibrations fall within the Late Pleistocene, and zero gene flow scenarios among current geographically isolated lineages could not be rejected. These results suggest that increased climate shifts in the Late Pleistocene have driven diversification and current range retraction patterns and that the differences between markers reflect the stochasticity of gene lineages (i.e. ancestral polymorphism) rather than gene flow and introgression. These results have important implications for the conservation of T. rufipunctatus (sensu novo), which is restricted to two drainage systems in the southwestern US and has undergone a recent and dramatic decline.     

First record of a brachiopod (Brachiopoda: Terebrataliidae) in the fouling of hydrotechnical installations in Peter the Great Bay,Sea of Japan

Large mature individuals of the brachiopod Coptothyris adamsi Davidson, 1871 were found in the fouling of a pier in Koz’mina Bight (Nakhodka Bay, Peter the Great Bay, Sea of Japan) in September 2006. The population density of the brachiopod in the fouling reached 100 specimens/m² and greatly exceeded the density of this species in benthic communities (4 specimens/m²). This is the first record of a brachiopod on anthropogenic substrates in the Far-Eastern seas of Russia. It is of particular interest because (1) C. adamsi is listed in the Red Book of Russia and (2) construction of an international oil terminal is planned for Koz’mina Bight. The brachiopod population can be used to monitor environmental conditions during the construction and further functioning of the oil terminal in Koz’mina Bight.     

Host‐associated genetic differentiation in a seed parasitic weevil Rhinusa antirrhini (Coleptera: Curculionidae) revealed by mitochondrial and nuclear sequence data

Plant feeding insects and the plants they feed upon represent an ecological association that is thought to be a key factor for the diversification of many plant feeding insects, through differential adaptation to different plant selective pressures. While a number of studies have investigated diversification of plant feeding insects above the species level, relatively less attention has been given to patterns of diversification within species, particularly those that also require plants for oviposition and subsequent larval development. In the case of plant feeding insects that also require plant tissues for the completion of their reproductive cycle through larval development, the divergent selective pressure not only acts on adults, but on the full life history of the insect. Here we focus attention on Rhinusa antirrhini (Curculionidae), a species of weevil broadly distributed across Europe that both feeds on, and oviposits and develops within, species of the plant genus Linaria (Plantaginaceae). Using a combination of mtDNA (COII) and nuclear DNA (EF1‐α) sequencing and copulation experiments we assess evidence for host associated genetic differentiation within R. antirrhini. We find substantial genetic variation within this species that is best explained by ecological specialisation on different host plant taxa. This genetic differentiation is most pronounced in the mtDNA marker, with patterns of genetic variation at the nuclear marker suggesting incomplete lineage sorting and/or gene flow between different host plant forms of R. antirrhini, whose origin is estimated to date to the mid‐Pliocene (3.77 Mya; 2.91–4.80 Mya).     

Taxonomy and biogeography of Australian species of the Ropalidia stigma group and R. variegata group (Hymenoptera: Vespidae)

The taxonomy of the Australian species of two Ropalidia species groups, the R. stigma group and R. variegata group, is revised and their distribution patterns are discussed. Two species in the R. stigma group (R. darwini and R. elegantula), and four species in the R. variegata group (R. flavinoda, R. gregaria, R. mutabilis and R. revolutionalis) are recognized in Australia, with a new synonymy of R. mutabilis torresiana Richards, 1978, under R. gregaria (de Saussure, 1854). Icaria torrida Smith, 1863, from Seram Island is synonymized with R. unicolor (Smith, 1859).     

Isozyme analysis of Galaxias species (Teleostei: Galaxiidae) from the Taieri River, South Island, New Zealand: a species complex revealed

We examined genetic differentiation among 23 samples of non-migratory river galaxias from 17 streams in the Taieri River system, South Island, New Zealand. Four major genetic types were found, two of which occur in narrow sympatry in one location. These were compared with topotypical material representing Galaxias anomalus from the Clutha system (Otago) and G. vulgaris from the Waimakariri system (Canterbury) in order to establish identity. Morphological examination of these four major genetic types revealed consistent concomitant differences. The results suggest that there are at least three species of river galaxias in the Taieri system: G. anomalus, G. vulgaris and at least one previously undescribed species. We propose that the genetic structuring and subsequent speciation of this group has been promoted by the absence of the marine juvenile phase that is found in five other members of the genus native to New Zealand. This structuring may be exacerbated by population fragmentation over the last century owing to the negative influence of introduced trout. The phylogenetic diversity within the river system mirrors the diverse flora and invertebrate fauna of the region, and has conservation implications that parallel those resulting from our improved knowledge of the New Zealand herpetofauna through the application of genetic analysis.     

With eyes wide open: a revision of species within and closely related to the Pocillopora damicornis species complex (Scleractinia; Pocilloporidae) using morphology and genetics

Molecular studies have been instrumental for refining species boundaries in the coral genus Pocillopora and revealing hidden species diversity within the extensively studied global species Pocillopora damicornis. Here we formally revise the taxonomic status of species closely related to and within the P. damicornis species complex, taking into account both genetic evidence and new data on morphometrics, including fine‐scale corallite and coenosteum structure. We found that mitochondrial molecular phylogenies are congruent with groups based on gross‐morphology, therefore reflecting species‐level differentiation. However, high levels of gross morphological plasticity and shared morphological characteristics mask clear separation for some groups. Fine‐scale morphological variation, particularly the shape and type of columella, was useful for differentiating between clades and provides an excellent signature of the evolutionary relationships among genetic lineages. As introgressive hybridization and incomplete lineage sorting complicate the delineation of species within the genus on the basis of a single species concept, the Unified Species Concept may represent a suitable approach in revising Pocillopora taxonomy. Eight species are herein described (P. damicornis, P. acuta, P. aliciae, P. verrucosa, P. meandrina, P. eydouxi, P. cf. brevicornis), including a novel taxon – P ocillopora bairdi sp. nov. (Schmidt‐Roach, this study). Citation synonyms and type materials are presented. © 2014 The Linnean Society of London     

Mitochondrial DNA divergence and phylogenetic relationships in mullets (Pisces: Mugilidae) of the Sea of Japan and the Sea of Azov revealed by PCR-RFLP-analysis

Three Mugilid species: Mugil cephalus (Linnaeus, 1758) and Liza haematocheila (Temminck et Schlegel, 1845; syn. Mugil soiuy, M. haematocheilus, L. soiuy, Chelon haematocheilus) from the Sea of Japan, as well as M. cephalus and Liza aurata (Risso, 1810) from the Sea of Azov were investigated on the basis of PCR-RFLP analysis of mitochondrial DNA (mtDNA) fragments, which included 12S/16S rRNA, and ND3/ND4L/ND4 genes. Among 61 individuals of three Mugilid species thirteen different haplotypes were detected. Eight and thirteen restriction endonucleases were found to be species-specific in 12S/16SrRNA and ND3/ND4L/ND4 respectively. This method may be useful for species identification. M. cephalus showed the largest genetic divergence while L. haematocheila and L. aurata were closely related and clustered together. The level of mtDNA differentiation between the two M. cephalus samples from the Sea of Japan and the Sea of Azov, i.e., nucleotide substitutions of approximately 3%, appeared to be relatively high.     

A phylogeny for grasshoppers of the genus Chitaura (Orthoptera: Acrididae) from Sulawesi, Indonesia, based on mitochondrial DNA sequence data

The Indonesian island of Sulawesi occupies a central position within the biogeographically complex region known as Wallacea. Its fauna is characterised by a high rate of endemism and a patchwork distribution of taxa within the island. The grasshopper genus Chitaura is a good example having at least ten endemic species with predominantly parapatric distributions. It can be used as a model for determining the origins of Sulawesi taxa and the within-island evolution that has led to the present patterns of distribution. Here we present a phylogenetic hypothesis for 28 individuals within the genus, including individuals of one species from Java and two from the Moluccas, based on DNA sequences of the mitochondrial cytochrome oxidase 1 gene. Frequent sequence heteroplasmy was observed. The phylogenetic hypothesis is consistent with recent interpretations of the geological history of Sulawesi suggesting separate evolution on the island for 7–14 Myr, possibly since South Sulawesi was connected to Borneo. Within the island, the pattern of genetic divergence is dominated by a strong correlation with geographic distance, with exceptions indicating past or present barriers to dispersal. Colonisation of the Moluccas from North or Central Sulawesi is implied. Levels of genetic divergence are compared with distribution patterns of colour morphs and with possible effects of tectonic movements in the Cenozoic, or Pleistocene climatic, vegetational and sea-level changes.     

A new potentially toxic Azadinium species (Dinophyceae) from the Mediterranean Sea,A. dexteroporum sp. nov.

A new photosynthetic planktonic marine dinoflagellate, Azadinium dexteroporum sp. nov., is described from the Gulf of Naples (South Tyrrhenian Sea, Mediterranean Sea). The plate formula of the species, Po, cp, X, 4′, 3a, 6″, 6C, 5?S, 6? and 2″″, is typical for this recently described genus. Azadinium dexteroporum is the smallest rep‐resentative of the genus (8.5 μm average length, 6.2 μm average width) and shares the presence of a small antapical spine with the type species A. spinosum and with A. polongum. However, it differs from all other Azadinium species for the markedly asymmetrical Po plate and the position of the ventral pore, which is located at the right posterior end of the Po plate. Another peculiarity of A. dexteroporum is the pronounced concavity of the second intercalary plate (2a), which appears collapsed with respect to the other plates. Phylogenetic analyses based on the large subunit 28S rDNA (D1/D2) and the internal transcribed spacer (ITS rDNA) support the attribution of A. dexteroporum to the genus Azadinium and its separation from the other known species. LC/MS‐TOF analysis shows that Azadinium dex‐teroporum produces azaspiracids in low amounts. Some of them have the same molecular weight as known compounds such as azaspiracid‐3 and ‐7 and Compound 3 from Amphidoma languida, as well as similar fragmentation patterns in some cases. This is the first finding of a species producing azapiracids in the Mediterranean Sea.     

Phylogenetic affinities and species limits within the genus Megadontomys (Rodentia: Cricetidae) based on mitochondrial sequence data

The evolutionary history of the genus Megadontomys, a group of mice allopatrically distributed along the cool‐humid forest in the highlands of México, is controversial. In this study, we examined phylogenetic relationships within the genus using sequences data from the complete mitochondrial cytochrome b gene. This information also allowed us to corroborate species limits, geographic boundaries of taxonomic entities and assess genetic variation within each taxon. The results of the phylogenetic analyses based on maximum likelihood, Bayesian inference and maximum parsimony were largely congruent in that M. nelsoni and M. thomasi were more closely related relative to M. cryophilus. These results are concordant with previous studies based on morphology and allozyme variation. However, testing of the alternative hypothesis of a closer evolutionary affinity between M. nelsoni–M. cryophilus did not produce a significantly less likely tree. The lack of unambiguous support towards one of these previously proposed contending hypotheses is congruent with the alternative scenario of an almost simultaneous diversification of the three species. Application of the phylogenetic species concept and the genetic species concept supports the recognition of three distinct taxonomic entities at the specific level. M. nelsoni inhabits the Sierra Madre Oriental (Hidalgo, Veracruz, and Puebla) including the Sierra Mazateca (Oaxaca); M. cryophilus is restricted to the Sierra de Juárez (Oaxaca); and M. thomasi occurs in portions of the Sierra Madre del Sur (Guerrero) and the Sierra Mixteca (Oaxaca). Our data show that M. thomasi is formed by two genetically distinct lineages that potentially may represent distinct Evolutionary Significant Units.