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1.
Fusarium wilt is an increasingly serious disease of watermelon that reduces crop productivity. Changes in microorganism populations and bacterial and fungal community structures in rhizosphere soil of watermelon cultivars resistant or susceptible to Fusarium oxysporum f. sp. niveum were investigated using a plate culture method and PCR-DGGE analysis. Plate culture showed that populations of culturable bacteria and actinomycetes were more abundant in the rhizosphere of the resistant watermelon cultivar than the susceptible cultivar, but the fungi population had the opposite pattern. Populations of Penicillium , Fusarium , and Aspergillus were significantly lower in the resistant cultivar than the susceptible cultivar at the fruiting and uprooting stages (p?< 0.05). Pattern matching analysis generated the dendrogram of the DGGE results indicating the relatedness of the different resistant watermelon cultivars and their corresponding rhizosphere microbial communities. Further sequencing analysis of specific bands from DGGE profiles indicated that different groups of bacteria and fungi occurred in the rhizosphere of different watermelon cultivars. Our results demonstrated that plant genotype had a significant impact on soil microbial community structure, and the differences in the rhizosphere microbial community may contribute to the differences in resistance to F. oxysporum f. sp. niveum.  相似文献   

2.
Monitoring the biological processes and microbial diversity is essential for sustaining the soil health for long-term productivity. In the present study, the impact of long-term nutrient management systems on changes in Azotobacter diversity of Indian semi-arid alfisol was assessed. Three soils, i.e., unfertilized control, soils amended with organic manures (OM), and with inorganic chemical fertilizers (IC) from century-old experimental fields were evaluated for Azotobacter diversity by Amplified Ribosomal DNA Restriction Analysis (ARDRA). Bray–Curtis’s similarity index of the ARDRA data of the isolates was analyzed by non-metric multi-dimensional scaling and hierarchical cluster analysis. The results revealed that the long-term organically managed soil recorded significantly higher soil organic carbon, microbial biomass carbon, and total culturable bacterial counts, whereas the chemical fertilized and control soils remained unaffected. Though the Azotobacter population was significantly higher in OM soil than IC and control soils, the genetic diversity was unaffected due to long-term addition of either organic manures or inorganic chemical fertilizers. This result implies the importance of continuous addition of organic manures and also the optimal use of inorganic chemical fertilizers without disturbing the biological properties of the soil.  相似文献   

3.
Restoration of metals‐contaminated environments requires a functional microbial community for successful plant community establishment, soil development, and biogeochemical cycling. Our research measured microbial community structure and carbon‐utilization diversity in treatment plots from a mine waste revegetation project near Butte, Montana. Treatments included two controls (raw tailings) either (1) with or (2) without tilling, (3) shallow‐tilled lime addition, (4) deep‐tilled lime addition, (5) lime slurry injection, (6) topsoil addition, and (7) an undisturbed area near the tailings. Microbial community structural differences were assayed by plate counts of heterotrophic bacteria, actinomycetes, fungi, and bacterial endospores, and quantification of arbuscular mycorrhizae colonization. Metabolic diversity differences were assessed by carbon‐utilization profiles generated with Biolog microtiter plates. Heterotrophic bacteria counts were significantly higher in the limed and topsoil treatment plots than the control plots, and the actinomycete and fungal counts increased in the tilled control plot as well. Endospore counts were significantly higher in the topsoil addition and the undisturbed plots than the other treatment plots. Carbon‐utilization activity was very low in untreated plots, intermediate in lime‐treated plots, and very high in topsoil and undisturbed plots. Arbuscular mycorrhizae (AM) colonization levels of two grass species showed low levels of colonization on control, shallow‐limed, and lime slurry‐injected plots, and high levels on the deep‐limed and topsoil‐addition plots. Plant and soil system components increased across the treatment plots, but individual components responded differently to changing environmental conditions.  相似文献   

4.
为了解喀斯特典型物种-小蓬竹根际土壤微生物及不同部位内生真菌多样性,采用沿等高线等距离取样法采集小蓬竹根际土壤及健康植株,通过可培养对根际土微生物及内生菌进行分离,利用分子技术对其进行鉴定,根据鉴定结果构建系统发育树,并计算小蓬竹根际土壤微生物和根茎叶内生真菌多样性。结果如下:(1)共从根际土壤、根、茎、叶分离得到139个真菌菌株,隶属于27属,其中根际土壤分离得到34个真菌菌株隶属于12属,根部分离得到的63个内生真菌菌株隶属于17个属,茎部分离得到的14个内生真菌菌株隶属于8个属,叶部分离得到28个内生真菌菌株隶属于9个属;(2)根际土壤共分离得到41株细菌菌株,隶属于7个属26个种,20株放线菌菌株,隶属于1属15种;从Shannon-Wiener多样性指数、均匀度指数、Simpson指数排序来看,真菌主要表现为根 > 根际土壤 > 茎 > 叶,细菌和放线菌多样性均较低。(3)按层次聚类分析可分别将真菌、细菌、放线菌聚为3支。小蓬竹根际土壤、根、茎和叶具有丰富的微生物多样性,不同部位菌群组成存在差异性(P<0.05),且存在以假单胞菌属、芽孢杆菌属等为优势属的抗盐耐旱菌群,这有助于揭示小蓬竹对喀斯特生境的适应性,以及为微生物-植物群落之间相互关系提供一定基础数据,为后期寻找小蓬竹相关耐性功能菌奠定基础。  相似文献   

5.
黄萎病不同发生程度棉田中土壤微生物多样性   总被引:6,自引:1,他引:5  
刘海洋  姚举  张仁福  王伟  余璇  王琦 《生态学报》2018,38(5):1619-1629
作物根际土壤微生物群落对土壤生态及作物健康至关重要。以棉花黄萎病不同发生程度棉田的土壤为研究对象,采用理化分析、微生物纯培养及高通量测序技术对土壤理化性质及微生物数量、细菌丰度多样性进行综合分析。结果表明:在纯培养条件下,大丽轮枝菌无菌发酵滤液对细菌生长有明显的抑制作用;棉田接种大丽轮枝菌对土壤中细菌、真菌、放线菌的数量及细菌菌群丰度多样性未产生明显影响,不同采样时间的土壤中细菌菌群结构差异更大。土壤中大丽轮枝菌微菌核数量与棉花黄萎病的发生程度呈显著正相关。土壤肥力对土壤中微生物数量起主导作用,而水稻-棉花轮作能够使棉田有效降盐、减病、改善土壤肥力。通过生物防治、作物轮作、深翻等调控措施增加土壤中有益菌群数量、改善土壤生态、降低棉田土壤中大丽轮枝菌菌源数量是减轻棉花黄萎病危害的基础。  相似文献   

6.
为明确不同微生物菌剂对秸秆降解率及秸秆降解过程中秸秆周围微生物变化规律的影响,在温室大棚内进行不同微生物菌剂降解秸秆试验。以玉米秸秆为基质,设玉米秸秆(对照组)、玉米秸秆+哈茨木霉(Trichoderma harzianum)(处理1)、玉米秸秆+哈茨木霉+地衣芽胞杆菌(Bacillus licheniformis)(处理2)三个处理。研究结果显示,单独用哈茨木霉处理可显著提高秸秆降解率,前期作用尤其明显;在秸秆降解的前30 d,秸秆降解率与秸秆中可培养真菌、细菌、放线菌呈显著正相关。不同微生物菌剂对秸秆中可培养微生物数量变化有显著影响,单独接种哈茨木霉后,秸秆中可培养真菌、细菌、放线菌数在前30 d显著高于对照组和混合菌剂处理,不同处理可培养活菌数均在90~120 d达到峰值,然后开始下降。研究结果表明,不同微生物菌剂对秸秆降解有显著影响,单独用哈茨木霉处理可显著提高秸秆降解率;不同处理对秸秆中可培养真菌、细菌、放线菌的影响有显著差异。可为秸秆降解与微生物相关性研究提供参考。  相似文献   

7.
Aims:  To assess the impact of Bacillus amyloliquefaciens and Microbacterium oleovorans on bacterial and fungal groups associated to the roots of field-grown maize.
Methods and Results:  Identification and count of bacterial and fungal culturable populations associated to the roots of maize seedlings, changes in culturable community structure according to the richness and diversity indexes concept and shifts in microbial activity through analysis of cellulolytic, ammonification and nitrification potentials were determined, in relation to kernel treatment with biological control agents. Following the treatment of maize kernels with B. amyloliquefaciens at 107 CFU ml−1, an increase in bacterial diversity was observed at the rhizoplane of resultant seedlings. Bacterial richness was significantly increased at the root inner tissues of seedlings treated with Mic. oleovorans . Fusarium , Aspergillus , Penicillium and Trichoderma were the main fungal genera isolated and there population sizes were unequally affected by the addition of biocontrol agents.
Conclusions:  Numbers and types of isolated bacteria and fungi changed in response to the addition of biocontrol agents, while microbial activity remained unchanged with respect to control.
Significance and Impact of the Study:  This study provides an insight of the effects of proven biocontrol agents on micro-organisms naturally associated to the target crop.  相似文献   

8.
直接参与土壤养分代谢周转过程的土壤微生物群落是土壤肥力质量的重要衡量指标。本文研究了长期施肥对农田黑土细菌和真菌r-K策略菌群(生态生理功能)的影响。结果表明:施肥处理菌群生长的均匀度和丰富度有所降低,细菌和真菌生态生理指数(EP)降低幅度分别为0.019~0.106和0.023~0.185。各处理K策略菌数量均大于相应的r策略菌。施肥能增加土壤r策略细菌数量,但不利于r策略真菌生长。与CK相比,r-K策略细菌和K策略真菌数量在单施中量有机肥处理中增幅最大;有机肥与化肥配施处理r-K策略细菌和K策略真菌数量高于单施同种化肥处理。在K策略菌占优势下,施用化肥有利于r策略菌比率提高,而有机肥与化肥配施倾向于使K策略菌比率增加。相关性分析表明,K策略菌群与土壤N素呈极显著正相关(P<0.01),可能是影响土壤N素循环的关键菌群。  相似文献   

9.
番茄根际微生物种群动态变化及多样性   总被引:6,自引:1,他引:5  
采用盆栽试验的方法对番茄根际主要微生物种群在不同生育期的动态变化进行了跟踪研究.结果表明,在番茄整个生育期内,可培养细菌数量在初花期和初果期时最多;放线菌数量从苗期到末期逐渐减少;真菌数量逐渐增多.番茄对细菌根际效应明显.DGGE图谱显示不同生育期番茄根际均具有较高的细菌多样性.根际细菌种类和数量在初花期发生较为显著的变化,初果期根际群落多样性指数(H)和物种丰度(S)值都达到最高,微生物最丰富,是筛选拮抗菌的较好时期.  相似文献   

10.
The aims of the present work were (1) to determine the influence of plant growth stages on the population size of culturable bacteria and fungi associated with rhizoplane and endo-rhizosphere of maize grown in field and (2) to establish the community structure of total culturable bacteria and fungi. Density, diversity and community structure of culturable rhizoplane and endo-rhizosphere populations at different maize plant growth stages were estimated. Plant development did not have influence on total culturable microflora density but it selectively influenced some bacterial and fungal groups present in the rhizosphere. However, the microbial community structure changed markedly over time. This knowledge is relevant for exploring endophytic rhizobacteria potential in the promotion of plant-growth, protection against pathogens and to detect perturbations in natural agro ecosystems.  相似文献   

11.
转Bt基因抗虫棉根际微生物区系和细菌生理群多样性的变化   总被引:51,自引:2,他引:51  
在大田栽培条件下 ,以转 Bt基因抗虫棉 GK-12和常规棉花泗棉 3号作为材料 ,在棉花不同发育时期 ,于 2 0 0 1和 2 0 0 2连续两年测定棉花根际土壤细菌、放线菌和真菌数量的变化 ,并在 2 0 0 2年棉花的花铃期和吐絮期对根际细菌生理群的数量和多样性进行了分析 ,结果表明 :虽然不同年份和生育期棉花根际微生物数量存在差异 ,但是 ,年度间和相同的发育时期棉花根际微生物的数量变化趋势一致。在棉花的苗期和吐絮期 ,转 Bt基因抗虫棉根际微生物的数量与对照差异不显著 ;在棉花的花铃期 ,转 Bt基因抗虫棉根际细菌的数量比对照增加 ,放线菌的数量差异不显著 ,而真菌的数量变化没有规律。在棉花发育的花铃期和吐絮期 ,Bt棉根际细菌生理群的总数量比常规棉增加 ,但是根际细菌生理群的 Simpson指数、Shannon-Wiener指数和细菌生理群分布的均匀度下降  相似文献   

12.
Organic compounds and mineral nitrogen (N) usually increase nitrous oxide (N2O) emissions. Vinasse, a by‐product of bio‐ethanol production that is rich in carbon, nitrogen, and potassium, is recycled in sugarcane fields as a bio‐fertilizer. Vinasse can contribute significantly to N2O emissions when applied with N in sugarcane plantations, a common practice. However, the biological processes involved in N2O emissions under this management practice are unknown. This study investigated the roles of nitrification and denitrification in N2O emissions from straw‐covered soils amended with different vinasses (CV: concentrated and V: nonconcentrated) before or at the same time as mineral fertilizers at different time points of the sugarcane cycle in two seasons. N2O emissions were evaluated for 90 days, the period that occurs most of the N2O emission from fertilizers; the microbial genes encoding enzymes involved in N2O production (archaeal and bacterial amoA, fungal and bacterial nirK, and bacterial nirS and nosZ), total bacteria, and total fungi were quantified by real‐time PCR. The application of CV and V in conjunction with mineral N resulted in higher N2O emissions than the application of N fertilizer alone. The strategy of vinasse application 30 days before mineral N reduced N2O emissions by 65% for CV, but not for V. Independent of rainy or dry season, the microbial processes were nitrification by ammonia‐oxidizing bacteria (AOB) and archaea and denitrification by bacteria and fungi. The contributions of each process differed and depended on soil moisture, soil pH, and N sources. We concluded that amoA‐AOB was the most important gene related to N2O emissions, which indicates that nitrification by AOB is the main microbial‐driven process linked to N2O emissions in tropical soil. Interestingly, fungal nirK was also significantly correlated with N2O emissions, suggesting that denitrification by fungi contributes to N2O emission in soils receiving straw and vinasse application.  相似文献   

13.
通过在亚热带杉木(Cunninghamia lanceolata)和米老排(Mytilaria laosensis)人工林中设置互换凋落物、去除凋落物、去除凋落物+去除根系和对照处理来分析改变地上、地下碳输入对人工林土壤微生物生物量和群落组成的影响。结果显示,改变地上、地下碳输入对土壤微生物生物量碳、氮的影响因树种而异。在米老排林中,土壤微生物生物量不受碳源的限制。而在杉木林中,加入米老排凋落物、去除凋落物和去除凋落物+去除根系3种处理中土壤微生物生物量碳、氮具有明显增加的趋势。磷脂脂肪酸分析结果显示,杉木林中,添加高质量的米老排凋落物后,革兰氏阳性细菌、阴性细菌、丛枝菌根真菌、放线菌和真菌群落生物量分别显著增加了24%、24%、53%、25%、28%,革兰氏阴性细菌和丛枝菌根真菌的相对丰度均有显著增加。与对照相比,杉木林中去除凋落物后革兰氏阳性细菌、阴性细菌、丛枝菌根真菌、放线菌和真菌群落生物量分别显著增加了22%、29%、44%、25%、52%,真菌与细菌比值显著增加了21%。但是,去除凋落物+去除根系处理对两个树种人工林土壤微生物群落组成均无显著影响。米老排和杉木林土壤微生物生物量碳、氮的季节变化格局不同,土壤养分有效性可能是驱动土壤微生物生物量季节变化的主要因子。未来研究需要关注凋落物和根系在不同树种人工林中对土壤微生物群落的相对贡献。  相似文献   

14.
Microbial population dynamics on seeds during drum and steeping priming   总被引:2,自引:0,他引:2  
In the UK, seeds are primed commercially via drum or steeping priming processes to improve seed germination and seedling establishment but the microbial population dynamics occurring during these processes are unknown. Consequently, changes in culturable bacterial and fungal populations that occurred during laboratory and commercial scale drum priming of carrot, leek and parsnip seed and during laboratory scale and commercial scale steeping priming of carrot and sugar beet seed were investigated. Populations of bacteria and pseudomonads increased by 2 and 4 log10 cfu g–1 seed during priming to reach between 7 and 10 log10 cfu g–1 seed with less than 1 log10 cfu g–1 seed decrease after redrying, irrespective of seed type or priming process. Pseudomonads represented approximately 10% of the culturable bacterial population. Fungal populations also increased by between 1 and 3 log10 cfu g–1 seed during priming of carrot, leek and parsnip seed and were little affected by redrying. Addition of a tefluthrin coating (a standard commercial insecticide treatment) during the drying stage of commercial scale drum priming had little effect on microbial populations. During steeping priming, populations of bacteria and pseudomonads on sugar beet also increased by 2 and 4 log10 cfu g–1 seed with less than 1 log10 cfu g–1 seed decrease after redrying. However, fungi did not increase in the same manner on sugar beet, suggesting that the sugar beet seed itself may have an inhibitory effect on fungal growth. The presence of thiram in the steeping liquid (a standard commercial fungicide treatment) inhibited fungal proliferation on carrot and sugar beet seed. Spore forming bacteria generally occurred at low levels on all seeds (between 2 and 5 log10 cfu g–1seed) and did not exhibit any characteristic population changes during priming or redrying. Clearly some culturable populations of microorganisms can increase reproducibly during these priming processes and survive the redrying procedure, thereby demonstrating the potential for a novel method of introducing microbial inoculants onto seed.  相似文献   

15.
Seed-borne pathogens in crops reduce the seed germination rate and hamper seedling growth, leading to significant yield loss. Due to the growing concerns about environmental damage and the development of resistance to agrochemicals among pathogen populations, there is a strong demand for eco-friendly alternatives to synthetic chemicals in agriculture. It has been well established during the last few decades that plant seeds harbor diverse microbes, some of which are vertically transmitted and important for plant health and productivity. In this study, we isolated culturable endophytic bacteria and fungi from soybean seeds and evaluated their antagonistic activities against common bacterial and fungal seed-borne pathogens of soybean. A total of 87 bacterial isolates and 66 fungal isolates were obtained. Sequencing of 16S rDNA and internal transcribed spacer amplicon showed that these isolates correspond to 30 and 15 different species of bacteria and fungi, respectively. Our antibacterial and antifungal activity assay showed that four fungal species and nine bacterial species have the potential to suppress the growth of at least one seed-borne pathogen tested in the study. Among them, Pseudomonas koreensis appears to have strong antagonistic activities across all the pathogens. Our collection of soybean seed endophytes would be a valuable resource not only for studying biology and ecology of seed endophytes but also for practical deployment of seed endophytes toward crop protection.  相似文献   

16.
Soil management practices can affect the population dynamics of soil microbial communities. Cultural practices can be adequately combined to benefit natural populations of microorganisms that may have a role in biological control (actinomycetes, Trichoderma spp., and Gliocladium spp.), thus contributing to the management of peanut fungal soilborne diseases in a sustainable manner within ecological boundaries. During six agricultural cycles, rhizosphere soil samples were taken from a field subjected to crop rotation (soybean, peanut, and maize), peanut being under two tillage systems (no till, reduced tillage) with the aim of quantifying populations of soil microorganisms. The incidence of diseases caused by soilborne fungi in peanut was determined at harvest. The highest amount of actinomycetes, Trichoderma spp., and Gliocladium spp. were recorded when maize was the preceding crop. Regarding tillage systems, the populations of the three groups of microorganisms were higher in peanut under no tillage than under reduced tillage. Under these conditions, the lowest incidence of peanut blight (Sclerotinia minor) and root rot (strains of Fusarium solani) was observed, suggesting a possible natural control of peanut soilborne pathogens. The quantification of actinomycetes, Trichoderma spp., and Gliocladium spp. was used as a tool to explore the impacts of different management systems on microbial groups that may be involved in the biological control of soilborne diseases, with the aim of combining those practices that improve native populations of possible beneficial microorganisms. This manipulation can provide sustainable management strategies in the control of soilborne diseases, avoiding the use of artificial inoculations of microorganisms, and reducing agrochemical application.  相似文献   

17.
The quantitative determination of Macrophomina phaseolina population in an arid soil was carried out utilizing a selective medium. The population of the fungus increased under continuous monocropping with a susceptible host, but considerable reduction was recorded with crop rotation or a change in crop sequence. The effects of fungi, bacteria, actinomycetes, total microbial population, minimum and maximum soil temperature on the survival of M. phaseolina population were studied in the absence of a crop at different soil depths. Highest population and survival rates were recorded at 0–5 cm soil depth. Correlation and path coefficient analyses were carried out to determine the role of individual factors influencing M. phaseolina population. In winter months, low temperature and high actinomycete population were found to be the major factors governing the reduction of the population of M. phaseolina.  相似文献   

18.
The effects of pesticides on the diversity of culturable soil bacteria   总被引:3,自引:0,他引:3  
The numbers of culturable soil bacteria in plots that had received either no pesticides or the full combination (aldicarb, chlorfenvinphos, benomyl, glyphosate, plus chlorotoluron or triadimefon) over a 20 year period were compared. Differences were very small although there were consistently higher numbers on the treated plot, possibly reflecting the greater crop yields which had been reported previously. There was no significant difference in numbers of bacterial colonies with homology to a nif gene probe in soils from the two plots. Genetic fingerprinting of Pseudomonas fluorescens isolates from the plots, using ERIC-PCR, showed that the dominant strains in the two populations were not the same although there was no obvious difference in the degree of diversity. Substrate utilization by microbial populations from the two plots was compared using Biolog plates. The population from the pesticide-treated plot showed a higher rate of substrate utilization which could reflect a slightly higher inoculum of heterotrophic bacteria, but could also indicate greater metabolic diversity in the population.  相似文献   

19.
Abstract Recent emphasis on residue management in sustainable agriculture highlights the importance of elucidating the mechanisms of microbial degradation of cellulose. Cellulose decomposition and its associated microbial dynamics in soil were investigated in incubation experiments. Population dynamics of actinomycetes, bacteria, and fungi were monitored by direct counts. Populations of oligotrophic bacteria in cellulose-amended soil were determined by plate count using a low C medium containing 4 mg C liter−1 agar, and copiotrophs using a high C medium. Cumulative 14CO2 evolution from 14C-labeled cellulose was best described by a multiphasic curve in a 28-day incubation experiment. The initial phase of decomposition was attributed mainly to the activity of bacterial populations with a low oligotroph-to-copiotroph ratio, and the second phase mainly to fungal populations. An increase in oligotroph-to-copiotroph ratio coincided with the emergence of a rapid 14CO2 evolution stage. Streptomycin reduced 14CO2 evolution during the first phase and prompted earlier emergence of the second phase, compared to the control. Cycloheximide initially promoted 14CO2 evolution but subsequently had a lasting negative effect on 14CO2 evolution. Cycloheximide addition significantly increased bacterial biomass and resulted in substantially stronger oscillation of active bacterial populations, whereas it initially reduced, and then stimulated, active fungal biomass. The observed changes in 14CO2 evolution could not be explained by observed shifts in fungal and bacterial biomass, probably because functional groups of fungi and bacteria could not be distinguished. However, it was suggested that oligotrophic bacteria prompted activation of cellulolytic enzumes in fungi and played an important role in leading to fungal dominance of cellulose decomposition. Received: 2 October 1995; Accepted: 10 February 1996  相似文献   

20.
Soil-dwelling entomopathogenic nematodes (EPNs) kill arthropod hosts by injecting their symbiotic bacteria into the host hemolymph and feed on the bacteria and the tissue of the dying host for several generations cycles until the arthropod cadaver is completely depleted. The EPN–bacteria–arthropod cadaver complex represents a rich energy source for the surrounding opportunistic soil fungal biota and other competitors. We hypothesized that EPNs need to protect their food source until depletion and that the EPN symbiotic bacteria produce volatile and non-volatile exudations that deter different soil fungal groups in the soil. We isolated the symbiotic bacteria species (Alcaligenes faecalis) from the EPN Oscheius spp. and ran infectivity bioassays against entomopathogenic fungi (EPF) as well as against plant pathogenic fungi (PPF). We found that both volatile and non-volatile symbiotic bacterial exudations had negative effects on both EPF and PPF. Such deterrent function on functionally different fungal strains suggests a common mode of action of A. faecalis bacterial exudates, which has the potential to influence the structure of soil microbial communities, and could be integrated into pest management programs for increasing crop protection against fungal pathogens.  相似文献   

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