The ecological causes of individual specialisation

Many generalist populations are composed of specialised individuals, whose niches are small subsets of the population niche. This 'individual specialisation' is a widespread phenomenon in natural populations, but until recently few studies quantified the magnitude of individual specialisation and how this magnitude varies among populations or contexts. Such quantitative approaches are necessary for us to understand how ecological interactions influence the amount of among-individual variation, and how the amount of variation might affect ecological dynamics. Herein, we review recent studies of individual specialisation, emphasising the novel insights arising from quantitative measures of diet variation. Experimental and comparative studies have confirmed long-standing theoretical expectations that the magnitude of among-individual diet variation depends on the level of intra and interspecific competition, ecological opportunity and predation. In contrast, there is little empirical information as to how individual specialisation affects community dynamics. We discuss some emerging methodological issues as guidelines for researchers studying individual specialisation, and make specific recommendations regarding avenues for future research.     

Understanding soaring bird migration through interactions and decisions at the individual level

Many soaring bird species migrate southwards in autumn from their breeding grounds in Europe and Central Asia towards their wintering grounds. Our knowledge about interactions between migrating birds, thermal selection during migration and mechanisms that lead to flocking or convergent travel networks is still very limited. To start investigating these aspects we developed an individual-based simulation model that describes the local interactions between birds and their environment during their migratory flight, leading to emergent patterns at larger scales. The aim of our model is to identify likely decision rules with respect to thermal selection and navigation. After explaining the model, it is applied to analyse the migration of white storks (Ciconia ciconia) over part of its migration domain. A model base-run is accompanied by a sensitivity analysis. It appears that social interactions lead to the use of fewer thermals and slight increases in distance travelled. Possibilities for different model extensions and further model application are discussed.     

Seasonal and individual variation in gregarine parasite levels in the field crickets Gryllus veletis and G.pennsylvanicus

ABSTRACT. 1. Gregarines, debilitating protozoan gut parasites, were monitored in two species of field cricket, Gryllus veletis (Alexander and Bigelow) and G.pennsylvanicus Burmeister, in northern Michigan in 1983 and 1984.
2. Gregarines were found in 31–51% of G.veletis individuals and 50–70% of G.pennsylvanicus.
3. Males were more heavily infected than females in G. veleris , but G.pennsylvanicus males and females had nearly equal infection levels; this disparity resulted in an overall lower infection rate for G. veletis.
4. Both species had fewer gregarines in 1983 than in 1984, possibly due to the adverse effect of drier conditions in 1983 on development of parasite cysts in the soil.
5. Levels of infection were not constant throughout the breeding season for either cricket species.
6. Body size was not correlated with parasite load in either G. veletis or G.pennsylvanicus.
7. Adult age was unrelated to gregarine level in G. veferis , whereas G.pennsylvanicus showed a positive correlation between adult age and parasite load during two non-consecutive weeks of the breeding season.     

Cowpox virus infection in natural field vole Microtus agrestis populations: delayed density dependence and individual risk

1. Little is known about the dynamics of pathogen (microparasite) infection in wildlife populations, and less still about sources of variation in the risk of infection. Here we present the first detailed analysis of such variation. 2. Cowpox virus is an endemic sublethal pathogen circulating in populations of wild rodents. Cowpox prevalence was monitored longitudinally for 2 years, in populations of field voles exhibiting multiannual cycles of density in Kielder Forest, UK. 3. The probability that available susceptible animals seroconverted in a given trap session was significantly positively related to host density with a 3-month time lag. 4. Males were significantly more likely to seroconvert than females. 5. Despite most infection being found in young animals (because transmission rates were generally high) mature individuals were more likely to seroconvert than immature ones, suggesting that behavioural or physiological changes associated with maturity contribute to variation in infection risk. 6. Hence, these analyses confirm that there is a delayed numerical response of cowpox infection to vole density, supporting the hypothesis that endemic pathogens may play some part in shaping vole cycles.     

Interplay of individual interactions and turbidity affects the functional response of three-spined sticklebacks Gasterosteus aculeatus

The effects of turbidity, size and the presence of conspecifics on the functional response, feeding latency and activity in the three-spined stickleback Gasterosteus aculeatus were examined. A significant interaction between standard length and presence of conspecifics demonstrated an increase in attack rates of larger individuals in the presence of conspecifics. Attack rate was also higher in turbid water. Feeding latency decreased with prey concentration and presence of conspecifics, but was not affected by turbidity. Activity level did not change with prey levels, but increased with turbidity. These results can help to better understand how individual flexibility in the functional response can affect prey mortality according to environmental perturbation and social interaction at the level of the predator.     

Focusing on individual plants to understand community scale biodiversity effects: the case of root distribution in grasslands

Spatial resource partitioning between species via differences in rooting depth is one of the main explanations for the positive biodiversity–productivity relationship. However, evidence for the importance of this mechanism is limited. This may be due to the community scale at which these interactions are often investigated. Community measures represent net outcomes of species interactions and may obscure the mechanisms underlying belowground interactions. Here, we assess the performance of ~1700 individual plants and their heterospecific neighbours over three growing seasons in experimental grassland plots containing one, four or sixteen different plant species and tested whether their performance in mixtures compared to monocultures was related to their own rooting depth versus the rooting depth of their heterospecific neighbours. Overall, individuals of deep-rooting species performed better in mixtures and this effect significantly increased when surrounded by more shallow-rooting species. This effect was not apparent for the shallow rooting species. Together, including both deep and shallow rooting species increased mixture performance. Our results show that taking the perspective of the individual rather than the community can elucidate the interactions between species that contribute to positive biodiversity effects, emphasizing the need for studies at different scales to disentangle the myriad interactions that take place in diverse communities.     

Nephrotoxicity of simultaneous exposure to mercury and uranium in comparison to individual effects of these metals in rats

Both inorganic mercury and uranium are known nephrotoxicants in mammals. In this study, the renal toxicity of a concurrent exposure to inorganic mercury and uranium was compared with the nephrotoxic effects of the individual metals in a rat model. Eight groups of rats, 10 animals per group, were subcutaneously given a single administration of mercuric chloride (HgCl₂, 0.34 mg/kg and 0.68 mg/kg), uranyl acetate dihydrate (UAD, 2.5 mg/kg and 5 mg/kg), or combinations of both compounds at the same doses. A ninth group of rats received sc injections of 0.9% saline and was designated as the control group. Necrosis of proximal tubules, which was observed in all experimental groups, was the most relevant morphologic abnormality. Marked changes, which were remarkably greater than those induced by the individual elements, were noted in some urinary parameters in the groups concurrently exposed to HgCl₂ and UAD. It could be an indicator of a synergistic interaction between mercury and uranium. In contrast, compared with the urinary levels found after individual administration of the highest doses of mercury and uranium, significant reductions in the urinary concentrations of these elements were noted following simultaneous exposure to both metals. At these doses, the reduction in the urinary metal excretion was also accompanied by significant decreases in the renal content of mercury and uranium. Whereas the results of some parameters pointed out a possible synergistic interaction between mercury and uranium, other measures hinted that an antagonistic interaction between these elements is also present.     

Plant traits shape soil legacy effects on individual plant–insect interactions

Plant-mediated soil legacy effects can be important determinants of the performance of plants and their aboveground insect herbivores, but, soil legacy effects on plant–insect interactions have been tested for only a limited number of host plant species and soils. Here, we tested the performance of a polyphagous aboveground herbivore, caterpillars of the cabbage moth Mamestra brassicae, on twelve host plant species that were grown on a set of soils conditioned by each of these twelve species. We tested how growth rate (fast- or slow-growing) and functional type (grass or forb) of the plant species that conditioned the soil and of the responding host plant species growing in those soils affect the response of insect herbivores to conditioned soils. Our results show that plants and insect herbivores had lower biomass in soils that were conditioned by fast-growing forbs than in soils conditioned by slow-growing forbs. In soils conditioned by grasses, growth rate of the conditioning plant had the opposite effect, i.e. plants and herbivores had higher biomass in soils conditioned by fast-growing grasses, than in soils conditioned by slow-growing grasses. We show that the response of aboveground insects to soil legacy effects is strongly positively correlated with the response of the host plant species, indicating that plant vigour may explain these relationships. We provide evidence that soil communities can play an important role in shaping plant–insect interactions aboveground. Our results further emphasize the important and interactive role of the conditioning and the response plant in mediating soil–plant–insect interactions.     

Host behaviour and physiology underpin individual variation in avian influenza virus infection in migratory Bewick's swans

Individual variation in infection modulates both the dynamics of pathogens and their impact on host populations. It is therefore crucial to identify differential patterns of infection and understand the mechanisms responsible. Yet our understanding of infection heterogeneity in wildlife is limited, even for important zoonotic host-pathogen systems, owing to the intractability of host status prior to infection. Using novel applications of stable isotope ecology and eco-immunology, we distinguish antecedent behavioural and physiological traits associated with avian influenza virus (AIV) infection in free-living Bewick's swans (Cygnus columbianus bewickii). Swans infected with AIV exhibited higher serum δ13C (-25.3±0.4) than their non-infected counterparts (-26.3±0.2). Thus, individuals preferentially foraging in aquatic rather than terrestrial habitats experienced a higher risk of infection, suggesting that the abiotic requirements of AIV give rise to heterogeneity in pathogen exposure. Juveniles were more likely to be infected (30.8% compared with 11.3% for adults), shed approximately 15-fold higher quantity of virus and exhibited a lower specific immune response than adults. Together, these results demonstrate the potential for heterogeneity in infection to have a profound influence on the dynamics of pathogens, with concomitant impacts on host habitat selection and fitness.     

Dissecting contact potentials for proteins: relative contributions of individual amino acids

Mimotopes mimic the three-dimensional topology of an antigen epitope, and are frequently recognized by antibodies with affinities comparable to those obtained for the original antibody-antigen interaction. Peptides and anti-idiotypic antibodies are two classes of protein mimotopes that mimic the topology (but not necessarily the sequence) of the parental antigen. In this study, we combine these two classes by selecting mimotopes based on single domain IgNAR antibodies, which display exceptionally long CDR3 loop regions (analogous to a constrained peptide library) presented in the context of an immunoglobulin framework with adjacent and supporting CDR1 loops. By screening an in vitro phage-display library of IgNAR variable domains (V(NAR)s) against the target antigen monoclonal antibody MAb5G8, we obtained four potential mimotopes. MAb5G8 targets a linear tripeptide epitope (AYP) in the flexible signal sequence of the Plasmodium falciparum Apical Membrane Antigen-1 (AMA1), and this or similar motifs were detected in the CDR loops of all four V(NAR)s. The V(NAR)s, 1-A-2, -7, -11, and -14, were demonstrated to bind specifically to this paratope by competition studies with an artificial peptide and all showed enhanced affinities (3-46 nM) compared to the parental antigen (175 nM). Crystallographic studies of recombinant proteins 1-A-7 and 1-A-11 showed that the SYP motifs on these V(NAR)s presented at the tip of the exposed CDR3 loops, ideally positioned within bulge-like structures to make contact with the MAb5G8 antibody. These loops, in particular in 1-A-11, were further stabilized by inter- and intra- loop disulphide bridges, hydrogen bonds, electrostatic interactions, and aromatic residue packing. We rationalize the higher affinity of the V(NAR)s compared to the parental antigen by suggesting that adjacent CDR1 and framework residues contribute to binding affinity, through interactions with other CDR regions on the antibody, though of course definitive support of this hypothesis will rely on co-crystallographic studies. Alternatively, the selection of mimotopes from a large (<4 x 10(8)) constrained library may have allowed selection of variants with even more favorable epitope topologies than present in the original antigenic structure, illustrating the power of in vivo selection of mimotopes from phage-displayed molecular libraries.     

Role of the individual domains of translation termination factor eRF1 in GTP binding to eRF3

Eukaryotic translational termination is triggered by polypeptide release factors eRF1, eRF3, and one of the three stop codons at the ribosomal A-site. Isothermal titration calorimetry shows that (i) the separated MC, M, and C domains of human eRF1 bind to eRF3; (ii) GTP binding to eRF3 requires complex formation with either the MC or M + C domains; (iii) the M domain interacts with the N and C domains; (iv) the MC domain and Mg2+ induce GTPase activity of eRF3 in the ribosome. We suggest that GDP binding site of eRF3 acquires an ability to bind gamma-phosphate of GTP if altered by cooperative action of the M and C domains of eRF1. Thus, the stop-codon decoding is associated with the N domain of eRF1 while the GTPase activity of eRF3 is controlled by the MC domain of eRF1 demonstrating a substantial structural uncoupling of these two activities though functionally they are interrelated.     

Nutritional ecology beyond the individual: a conceptual framework for integrating nutrition and social interactions

Over recent years, modelling approaches from nutritional ecology (known as Nutritional Geometry) have been increasingly used to describe how animals and some other organisms select foods and eat them in appropriate amounts in order to maintain a balanced nutritional state maximising fitness. These nutritional strategies profoundly affect the physiology, behaviour and performance of individuals, which in turn impact their social interactions within groups and societies. Here, we present a conceptual framework to study the role of nutrition as a major ecological factor influencing the development and maintenance of social life. We first illustrate some of the mechanisms by which nutritional differences among individuals mediate social interactions in a broad range of species and ecological contexts. We then explain how studying individual‐ and collective‐level nutrition in a common conceptual framework derived from Nutritional Geometry can bring new fundamental insights into the mechanisms and evolution of social interactions, using a combination of simulation models and manipulative experiments.     

When things don't add up: quantifying impacts of multiple stressors from individual metabolism to ecosystem processing

Ecosystems are exposed to multiple stressors which can compromise functioning and service delivery. These stressors often co‐occur and interact in different ways which are not yet fully understood. Here, we applied a population model representing a freshwater amphipod feeding on leaf litter in forested streams. We simulated impacts of hypothetical stressors, individually and in pairwise combinations that target the individuals' feeding, maintenance, growth and reproduction. Impacts were quantified by examining responses at three levels of biological organisation: individual‐level body sizes and cumulative reproduction, population‐level abundance and biomass and ecosystem‐level leaf litter decomposition. Interactive effects of multiple stressors at the individual level were mostly antagonistic, that is, less negative than expected. Most population‐ and ecosystem‐level responses to multiple stressors were stronger than expected from an additive model, that is, synergistic. Our results suggest that across levels of biological organisation responses to multiple stressors are rarely only additive. We suggest methods for efficiently quantifying impacts of multiple stressors at different levels of biological organisation.     

鼎湖山南亚热带常绿阔叶林植物功能性状变异与不同垂直层次个体生长的关联

建立植物功能性状与群落动态之间的关联是功能生态学的核心问题之一。本文基于鼎湖山1.44 ha塔吊样地的两次调查数据, 通过采集样地内所有4,142株个体的6种植物功能性状, 对比分析了个体水平植物功能性状和物种水平功能性状均值对不同垂直层次(灌木层、亚冠层和林冠层)个体生长的影响差异。首先, 分析了不同垂直层次下各植物功能性状的变化趋势; 其次, 计算了不同垂直层次下各植物功能性状的种内和种间变异水平; 最后, 运用结构方程模型探讨了植物功能性状、光竞争以及地下竞争对不同垂直层次树木生长的影响。结果表明: (1)不同垂直层次下的植物功能性状表现出明显的分异, 由灌木层至林冠层, 叶面积、比叶面积和能量供求关系指数显著降低, 而叶片厚度和叶片干物质含量显著升高; (2)不同垂直层次下植物功能性状的种间变异均大于种内变异, 且林冠层的种内功能性状变异均大于灌木层和亚冠层; (3)基于个体水平植物功能性状的结构方程模型较物种水平功能性状均值对生长具有更高的解释程度, 且个体水平植物功能性状的引入更有利于提高对灌木层个体生长的预测能力; (4)光竞争和地下竞争主要通过影响功能性状间接影响植物生长。由灌木层至林冠层, 同种间的相互作用逐渐减弱, 异种间的相互作用逐渐增强。综上, 将个体水平植物功能性状纳入分析有助于更好地理解群落的结构和动态。     

Temporal resource partitioning varies with individual competitive ability: a test with Arctic charr Salvelinus alpinus visiting a feeding site from a refuge

The relationship among relative size, growth rate and diel visits into a feeding compartment were studied in Arctic charr Salvelinus alpinus , a species known for its flexible activity patterns. Individual swimming activity from a refuge compartment into an uncovered feeding compartment was studied using an automated passive integrated transponder system. Approximately half of the individuals in four groups of S. alpinus spent 70–80% of their time in the feeding compartment, regardless of the time of day. The remaining individuals spent nearly as much time (70–80%) in the feeding compartment during the night, but only spent c. 20% of their time in the feeding compartment during the day. These individuals had a lower mean ± s . d . masses (13·17 ± 4·34 g) and growth rate (daily growth coefficient, G = 0·80 ± 1·19) than those individuals that spent most of their time in the feeding compartment during the day (mass = 16·65 ± 5·73 g and G = 2·04 ± 0·81). This indicated that some smaller fish were absent from the feeding compartment during daytime, possibly to avoid aggression from larger conspecifics. In the open compartment, the aggressive interactions were more frequent in daylight than during night and always low in the covered compartment.     

Host-associated fitness trade-offs do not limit the evolution of diet breadth in the small milkweed bug Lygaeus kalmii (Hemiptera: Lygaeidae)

Theoretical models of evolution in a temporally variable environment predict that genotypes with low variance in fitness across generations will be favored. When host use varies temporally and fitness trade-offs exist among hosts, such that an increase in performance on one host results in a correlated decrease on the other, selection for low variance in fitness across generations will favor genotypes which are generalists. Before predictions such as this can be extended to natural herbivore populations, however, it is necessary to understand the extent to which performance trade-offs limit simultaneous adaptation to multiple hosts. The experiment reported here compares two populations of the common milkweed bug, Lygaeus kalmii (Hemiptera: Lygaeidae) which differ in patterns of host usage. One population is largely restricted to milkweed (Asclepias spp.) when milkweed seeds are available, but becomes a scavenger on a large assortment of available seeds when milkweed seeds are unavailable. The second population is restricted largely to dandelion (Taraxacum officinale), without access to milkweed. We examine these populations to test for host-associated genetic trade-offs between specialization on dandelion (Taraxacum) and two species of milkweed, Asclepias fascicularis, which is low in cardiac glycoside content, and A. speciosa, which is high in cardiac glycoside content. Despite the difference in patterns of host use of the two L. kalmii populations, the populations did not differ in their performance on any of the host plants. Within each population, bugs performed nearly as well on each host, except that bugs had significantly lower survivorship on dandelion than on either milkweed species. Trade-offs in performance among hosts were not present in either population: estimated genetic correlations across hosts were strongly positive. The inability of this study to detect host-associated fitness trade-offs is consistent with most published data on this topic.     

Animal behaviour shapes the ecological effects of ocean acidification and warming: moving from individual to community‐level responses

Biological communities are shaped by complex interactions between organisms and their environment as well as interactions with other species. Humans are rapidly changing the marine environment through increasing greenhouse gas emissions, resulting in ocean warming and acidification. The first response by animals to environmental change is predominantly through modification of their behaviour, which in turn affects species interactions and ecological processes. Yet, many climate change studies ignore animal behaviour. Furthermore, our current knowledge of how global change alters animal behaviour is mostly restricted to single species, life phases and stressors, leading to an incomplete view of how coinciding climate stressors can affect the ecological interactions that structure biological communities. Here, we first review studies on the effects of warming and acidification on the behaviour of marine animals. We demonstrate how pervasive the effects of global change are on a wide range of critical behaviours that determine the persistence of species and their success in ecological communities. We then evaluate several approaches to studying the ecological effects of warming and acidification, and identify knowledge gaps that need to be filled, to better understand how global change will affect marine populations and communities through altered animal behaviours. Our review provides a synthesis of the far‐reaching consequences that behavioural changes could have for marine ecosystems in a rapidly changing environment. Without considering the pervasive effects of climate change on animal behaviour we will limit our ability to forecast the impacts of ocean change and provide insights that can aid management strategies.