Limited habitat and conservation value of a young artificial reef

Loss and degradation of natural habitats and their biodiversity may, arguably, be mitigated or compensated through the creation of human-engineered habitats: the underlying conservation tenet is that these artificial habitats compensate for diminished diversity caused by human impacts at local or regional scales. This approach is widely used in the sea by purposefully scuttling ships to create artificial reefs, but its performance as a conservation tool is seldom critically examined in these situations. Here we test if the diversity of sessile invertebrate assemblages on a large, but young (3 years), artificial reef, created by sinking a 133 m long battle ship off Eastern Australia, can mimic that of nearby natural reefs. We use this system as a model to test whether this artificial reef can form compensatory habitat of comparable quality and levels of biodiversity. Our assessment is based on the abundance, species richness, and species composition of sessile invertebrate assemblages, including corals. Despite some signs that temporal trajectories of ecological metrics, such as cover, began to approach natural conditions after 3 years, the ecological structure of sessile invertebrate assemblages on this young wreck remained fundamentally different from those on nearby natural reefs. In particular, large, long-lived corals were abundant on natural rocky reefs, but were rare and covered little area on the young wreck. These data demonstrate that when trajectories to community convergence with natural habitats are prolonged, as may be the case here, any compensatory effects of artificial habitats will have a considerable time lag. Such lags have implications for appraising the conservation value of wrecks and artificial reefs, and they emphasize the need to explicitly acknowledge temporal dynamics when using artificial habitats as complementary conservation tools to augment larger conservation efforts on natural systems.     

Analysing ecological networks of species interactions

Network approaches to ecological questions have been increasingly used, particularly in recent decades. The abstraction of ecological systems – such as communities – through networks of interactions between their components indeed provides a way to summarize this information with single objects. The methodological framework derived from graph theory also provides numerous approaches and measures to analyze these objects and can offer new perspectives on established ecological theories as well as tools to address new challenges. However, prior to using these methods to test ecological hypotheses, it is necessary that we understand, adapt, and use them in ways that both allow us to deliver their full potential and account for their limitations. Here, we attempt to increase the accessibility of network approaches by providing a review of the tools that have been developed so far, with – what we believe to be – their appropriate uses and potential limitations. This is not an exhaustive review of all methods and metrics, but rather, an overview of tools that are robust, informative, and ecologically sound. After providing a brief presentation of species interaction networks and how to build them in order to summarize ecological information of different types, we then classify methods and metrics by the types of ecological questions that they can be used to answer from global to local scales, including methods for hypothesis testing and future perspectives. Specifically, we show how the organization of species interactions in a community yields different network structures (e.g., more or less dense, modular or nested), how different measures can be used to describe and quantify these emerging structures, and how to compare communities based on these differences in structures. Within networks, we illustrate metrics that can be used to describe and compare the functional and dynamic roles of species based on their position in the network and the organization of their interactions as well as associated new methods to test the significance of these results. Lastly, we describe potential fruitful avenues for new methodological developments to address novel ecological questions.     

Ecological divergence and habitat isolation between two migratory forms of Japanese threespine stickleback (Gasterosteus aculeatus)

When two closely related species migrate to divergent spawning sites, divergent use of spawning habitats can directly reduce heterospecific mating. Furthermore, adaptations to divergent spawning habitats can promote speciation as a by‐product of ecological divergence. Here, we investigated habitat isolation and ecological divergence between two anadromous forms of threespine stickleback (Gasterosteus aculeatus), the Japan Sea and Pacific Ocean forms. In several coastal regions of eastern Hokkaido, Japan, these forms migrate to the same watershed to spawn. Our field surveys in a single watershed revealed that segregation of distinct spawning sites between the two forms was maintained within the watershed across multiple years. These spawning sites diverged in salinity and predator composition. Morphological and physiological divergence between the forms also occurs in the direction predicted by ecological differences between the spawning sites. Our data indicate that migration into divergent spawning habitats can be an important mechanism contributing to speciation and phenotypic divergence in anadromous fishes.     

Are forest birds categorised as “edge species” strictly associated with edges?

In recent years, studies of bird-habitat relationships undertaken in the context of habitat fragmentation have led to the widespread use of species categorisation according to their response to edge alongside mature forest patches (edge species, interior species, interior-edge generalist species). In other research contexts, especially in less fragmented landscapes dominated by a forested land base in various age classes, bird-habitat relationships are often described in relation to their use of various successional stages (early-successional species, mature forest species, generalist species). A simple comparison of these two commonly-used classifications schemes in a close geographical range for 60 species in eastern North America as well as for 36 species in north-western Europe clearly reveals that in these two particular biomes the two classifications are not independent. We believe that this association is not only a semantic issue and has important ecological consequences. For example, almost all edge species are associated with early-successional habitats when a wide range of forest age-classes are found in a given area. Accordingly, we suggest that most species considered to prefer edge habitats in agricultural landscapes are in fact only early-successional species that could not find shrubland conditions apart from the exposed edges of mature forest fragments. To be considered a true edge species, a given species should require the simultaneous availability of more than one habitat type and consequently should be classified as a habitat generalist in its use of successional stages. However, 28 out of 30 recognised edge species were considered habitat specialists in terms of successional status. Based on these results, we conclude that "real edge species" are probably quite rare and that we should make a difference between true edge species and species which in some landscapes, happen to find their habitat requirements on edges.     

Ecological constraints on the evolutionary association between field and preferred temperatures in Tropidurinae lizards

Ectothermic body temperatures affect organismal performances and presumably fitness, and are strongly influenced by the thermal environment. Therefore, the processes of colonization of novel thermal habitats by lizards might involve changes in thermal preferences, performance curves (reaction norms) and field activity temperatures. According to theory based on optimality analysis, diverse aspects of the thermal biology of vertebrate ectotherms should co-evolve as to maximize performance at the temperature range more often experienced by animals in the field. One corollary of this premise is that derived lizard clades that experienced a significant shift in thermal ecology, in comparison with the ancestral condition, should prefer and select temperatures in a thermal gradient similar to those experienced in nature. Here we report an analysis of the premise stated before. Specifically, we verify whether or not Tropidurinae species from three major Brazilian habitats (the Rainforests, the semi-arid Caatingas and the Cerrados, a Savannah-like biome) differ in thermal ecology and thermoregulatory behavior. The Caatinga is believed to be the ancestral habitat of this sub-family, and differences are expected because species from semi-arid habitats usually exhibit high body temperatures for lizards, whereas forest specialists might be thermoconformers and active at low temperatures. We also compared selected temperatures in the laboratory by species from the two open habitats (Caatingas and Cerrados). Data were analyzed using both conventional and phylogenetic analysis tools. Although species from Caatingas exhibited higher activity temperatures in nature than those from Cerrados, mean selected temperatures were similar between ecological groups. Phylogenetic analyses confirmed these findings and evidenced large␣evolutionary divergence in field activity temperatures between sister species from different␣open habitats without coupled divergence in selected temperatures. Therefore, thermoregulatory behavior and ecological parameters did not evolve similarly during the colonization of contrasting open habitats by Tropidurinae.     

Resource-based habitat definition, niche overlap and conservation of two sympatric glacial relict butterflies

The precise knowledge of ecological resources and conditions required by species threatened by rapidly changing environmental conditions is of prime importance for conservation biology. Transferability of this knowledge between species with similar ecological requirements is often assumed, but rarely tested. This is especially the case for glacial relict populations confined to climate‐habitat traps from where they cannot move to rejoin areas with suitable environmental conditions. Using two glacial relict butterflies as model organisms, we first quantitatively define larval and adult resource‐based habitat use of each species. Secondly, we test the transferability of ecological profiles (both habitat and ecological niche) between these two species that share both the same biotope and the same host plant. Our results show that both species have markedly different ecological requirements relating to differences in life history and behavioural traits (i.e. egg‐laying strategies and mate‐locating behaviour). Although the two species share many ecological features, they use different functional habitats within our study site. The high degree of interspecific niche overlap should indicate a high interspecific competition. However, we argue that their co‐existence can be explained by the non‐limiting abundance of some resources (e.g. host plants), by the partial separation in time of adult flight periods and by the territorial behaviour of one of the species. We discuss the following general messages: (1) functional habitat of a (threatened) species should be defined in a spatial context corresponding to individual station keeping, and (2) quick diagnosis based on similar ecological requirements may be misleading for the design of reliable conservation and restoration strategies. Detailed mechanistic and quantitative ecological understanding of resource‐use and environmental tolerances across an organism's life cycle is essential for effective conservation in changing environments, like for glacial relict species.     

Trait‐based life strategies,ecological niches,and niche overlap in the nekton of the data‐poor Mediterranean Sea

Biological traits can determine species ecological niches and define species responses to environmental variation. Species have a specific functional position in the biological community, resulting in interactions like interspecific competition. In this study, we used biological traits in order to define the life strategies of 205 nektonic species of the Mediterranean Sea. Furthermore, traits related to resource use were analyzed to determine the level of trait and niche overlap and their relationship to life strategies. Focusing on habitats of importance (Posidonia beds, coralligène formations, and lagoons), we investigated strategies and niches of the species present there. Finally, we examined the life strategy of Lessepsian species and investigated the niche overlap between them and indigenous species. Archetypal analysis indicated the existence of three life histories corresponding to strategies already documented for fish (equilibrium, periodic, and opportunistic), with some species also placed in intermediate positions. Niche overlap was evaluated by multiple correspondence analysis and the generation of a single distance metric between all species pairs. This identified species occupying relatively empty (underexploited) ecological niches, like the Lessepsian species Siganus luridus and S. rivulatus, a finding that can also be associated with their establishment in the Mediterranean. Most Lessepsian species were associated with the opportunistic life history strategy, again an important aspect related to their establishment. Also, we documented that most species occurring in important habitats have a relatively high overlap of niches. No significant differences were found in the life strategies across Mediterranean habitats; however, variation in niche overlap and traits related to habitat use was detected. The findings can be useful to determine theoretical competition between species and to identify empty ecological niches. Fisheries science can also benefit from comprehending the dynamics of competing stocks or predict the responses of data‐poor stocks to anthropogenic stressors from known examples of species with shared life strategies.     

Finding answers in the dark: caves as models in ecology fifty years after Poulson and White

The use of semi‐isolated habitats such as oceanic islands, lakes and mountain summits as model systems has played a crucial role in the development of evolutionary and ecological theory. Soon after the discovery of life in caves, different pioneering authors similarly recognized the great potential of these peculiar habitats as biological model systems. In their 1969 paper in Science, ‘The cave environment’, Poulson and White discussed how caves can be used as natural laboratories in which to study the underlying principles governing the dynamics of more complex environments. Together with other seminal syntheses published at the time, this work contributed to establishing the conceptual foundation for expanding the scope and relevance of cave‐based studies. Fifty years after, the aim of this review is to show why and how caves and other subterranean habitats can be used as eco‐evolutionary laboratories. Recent advances and directions in different areas are provided, encompassing community ecology, trophic‐webs and ecological networks, conservation biology, macroecology and climate change biology. Special emphasis is given to discuss how caves are only part of the extended network of fissures and cracks that permeate most substrates and, thus, their ecological role as habitat islands is critically discussed. Numerous studies have quantified the relative contribution of abiotic, biotic and historical factors in driving species distributions and community turnovers in space and time, from local to regional scales. Conversely, knowledge of macroecological patterns of subterranean organisms at a global scale remains largely elusive, due to major geographical and taxonomical biases. Also, knowledge regarding subterranean trophic webs and the effect of anthropogenic climate change on deep subterranean ecosystems is still limited. In these research fields, the extensive use of novel molecular and statistical tools may hold promise for quickly producing relevant information not accessible hitherto.     

Species pools in cultural landscapes – niche construction,ecological opportunity and niche shifts

This paper discusses the ecology of species that were favoured by the development of the cultural landscape in central and NW Europe beginning in the Neolithic and the Bronze Age, with a focus on mechanisms behind species responses to this landscape transformation. A fraction of species may have maintained their realized niches from the pre‐ agricultural landscape and utilized similar niches created by the landscape transformation. However, I suggest that many species responded by altering their niche relationships, and a conceptual model is proposed for this response, based on niche construction, ecological opportunity and niche shifts. Human‐mediated niche construction, associated with clearing of forests and creation of pastures and fields promoted niche shifts towards open habitats, and species exploited the ecological opportunity provided by these created environments. This process was initially purely ecological, i.e. the new habitats must have been included in the original fundamental niche of the species. Two other features of human‐mediated niche construction, increased interconnectivity and increased spatial stability of open habitats, resulted in species accumulating in the habitats of the constructed landscape. As a consequence, selection processes were initiated favouring traits promoting fitness in the constructed landscape. This process implied a feed‐back to niche shifts, but now also including evolutionary changes in fundamental niches. I briefly discuss whether this model can be applied also to present‐day anthropogenic impact on landscapes. A general conclusion is that ecological and evolutionary changes in species niches should be more explicitly considered in modeling and predictions of species response to present‐day landscape and land‐use changes.     

基于物种分布的北京平原生态网络构建

高强度的城市化活动导致了生物栖息地破碎化、退化和消失,是生物多样性减少的主要原因。建立城市地区生态网络是保护生物多样性的重要途径。因其他物种数据可获得性差,以观测的典型鸟类群落为指示物种,探讨构建生态网络,可为城市生物多样性保护提供新思路。以北京市平原区为研究范围,重点基于86种鸟类分布大数据,通过Maxent模型掩膜生成栖息地源地并进行分级,在GIS技术的支撑下,以土地利用数据建立鸟类活动阻力面,采用最小累积阻力模型算法,模拟并形成了平原地区分级的生物多样性保护网络。研究结果表明,河湖湿地和城市公园组成了北京平原地区生态网络的优势景观类型,占平原区生态空间的81%。基于景观类型大小与物种数量的线性关系筛选出分级生物栖息地,其中一级生物栖息地58个,二级生物栖息地146个,通过模型模拟形成了平原地区生物多样性保护的一二级生态网络,共948条网络,长3760km。筛选出重要生态节点12处,关键生态廊道6条,是保护平原地区生物多样性的重要生态设施。该生态网络的实施对于提升首都平原区的生物多样性具有重要价值,研究结果可为国土生态空间优化提供重要科学依据和参考。     

Ecological release in White Sands lizards

Ecological opportunity is any change that allows populations to escape selection from competition and predation. After encountering ecological opportunity, populations may experience ecological release: enlarged population size, broadened resource use, and/or increased morphological variation. We identified ecological opportunity and tested for ecological release in three lizard colonists of White Sands, New Mexico (Sceloporus undulatus, Holbrookia maculata, and Aspidoscelis inornata). First, we provide evidence for ecological opportunity by demonstrating reduced species richness and abundance of potential competitors and predators at White Sands relative to nearby dark soils habitats. Second, we characterize ecological release at White Sands by demonstrating density compensation in the three White Sands lizard species and expanded resource use in White Sands S. undulatus. Contrary to predictions from ecological release models, we observed directional trait change but not increased trait variation in S. undulatus. Our results suggest that ecological opportunity and ecological release can be identified in natural populations, especially those that have recently colonized isolated ecosystems.     

A stochastic biodiversity model with overlapping niche structure

The niche is a fundamental ecological concept that underpins many explanations of patterns of biodiversity. The complexity of niche processes in ecological systems, however, means that it is difficult to capture them accurately in theoretical models of community assembly. In this study, we build upon simple neutral biodiversity models by adding the important ingredient of overlapping niche structure. Our model is spatially implicit and contains a fixed number of equal-sized habitats. Each species in the metacommunity arises through a speciation event; at which time, it is randomly assigned a fundamental niche or set of environments/habitats in which it can persist. Within each habitat, species compete with other species that have different but overlapping fundamental niches. Species abundances then change through ecological drift; each, however, is constrained by its maximum niche breadth and by the presence of other species in its habitats. Using our model, we derive analytical expressions for steady-state species abundance distributions, steady-state distributions of niche breadth across individuals and across species, and dynamic distributions of niche breadth across species. With this framework, we identify the conditions that produce the log-series species abundance distribution familiar from neutral models. We then identify how overlapping niche structure can lead to other species abundance distributions and, in particular, ask whether these new distributions differ significantly from species abundance distributions predicted by non-overlapping niche models. Finally, we extend our analysis to consider additional distributions associated with realized niche breadths. Overall, our results show that models with overlapping niches can exhibit behavior similar to neutral models, with the caveat that species with narrow fundamental niche breadths will be very rare. If narrow-niche species are common, it must be because they are in a non-overlapping niche or have countervailing advantages over broad-niche species. This result highlights the role that niches can play in establishing demographic neutrality.     

The conditions for tool use in primates: implications for the evolution of material culture

In order to identify the conditions that favored the flourishing of primate tool use into hominid technology, we examine inter- and intraspecific variation in manufacture and use of tools in extant nonhuman primates, and develop a model to account for their distribution. We focus on tools used in acquiring food, usually by extraction. Any model for the evolution of the use of feeding tools must explain why tool use is found in only a small subset of primate species, why many of these species use tools much more readily in captivity, why routine reliance on feeding tools is found in only two species of ape, and why there is strong geographic variation within these two species. Because ecological factors alone cannot explain the distribution of tool use in the wild, we develop a model that focuses on social and cognitive factors affecting the invention and transmission of tool-using skills. The model posits that tool use in the wild depends on suitable ecological niches (especially extractive foraging) and the manipulative skills that go with them, a measure of intelligence that enables rapid acquisition of complex skills (through both invention and, more importantly, observational learning), and social tolerance in a gregarious setting (which facilitates both invention and transmission). The manipulative skills component explains the distribution across species of the use of feeding tools, intelligence explains why in the wild only apes are known to make and use feeding tools routinely, and social tolerance explains variation across populations of chimpanzees and orangutans. We conclude that strong mutual tolerance was a key factor in the explosive increase in technology among hominids, probably intricately tied to a lifestyle involving food sharing and tool-based processing or the acquisition of large, shareable food packages.     

Isodars unveil asymmetric effects on habitat use caused by competition between two endangered species

In order for competing species to coexist, segregation on some ecological niche component is required and is often mediated by differential habitat use. When unequal competitors are involved, the dominant species tends to displace the subordinate one to its less preferred habitat. Here, we use habitat isodars, an approach which reflects evolutionary stable strategies of habitat selection, to evaluate whether interspecific competition between two competing species with distinct habitat preferences, the little bustard Tetrax tetrax and the great bustard Otis tarda, modulates their habitat use. Field data on these endangered species demonstrate that unequal competitors can coexist without completely segregating on their preferred habitats. The negatively sloped isodar of the subordinate little bustard unveils its competition with the dominant great bustard. Interference from great bustards in secondary cereal habitats reinforces use of preferred natural habitat by little bustards. Studies of density‐dependent habitat selection by a single‐species can thus aid in identifying the effects of competition on community composition, and guide the conservation of at‐risk species. Isodars, in particular, represent a promising method to gain clear knowledge on interspecific competition for species in which experimental manipulations are not feasible.     

Disturbance is an important factor in the evolution and distribution of root-sprouting species

We address the neglected issue of ecological and evolutionary significance of root sprouting (RS) in plants. RS has been considered a sort of morphological curiosity. However, existing data of the Central European flora show that it occurs in about 10% of species. These species are therefore independent of a stem-derived bud bank in their resprouting. As sprouting from roots has been hypothesised to help plants survive disturbance, we used a large data set (2914 species with data on presence/absence of RS from Central Europe) to perform comparative analyses of its occurrence in disturbed habitats, evolution of RS in response to disturbance, and its distribution among individual plant lineages. To address these questions, we linked the data with species-level indicator values for disturbance, data on additional functional traits and phylogenetic data. We confirmed that RS ability is more frequent in plants growing in habitats subjected to disturbance, especially in annuals and clonal species. This contrasts with clonality via stem-based organs, which does not promote occurrence in disturbed habitats. Disturbance severity is the most important factor determining RS species distribution, whereas disturbance frequency plays a smaller role. RS is phylogenetically less conservative than sprouting from the stem-based belowground bud bank and thus can be easily acquired or lost in evolution, although these rates strongly differ between individual lineages. Evolution of RS seems to be driven largely by occurrence in disturbed habitats, and has appeared/disappeared independently of the presence of a stem-derived bud bank. Importantly, the data support the scenario in which colonisation of such habitats occurs prior to acquiring the RS ability, which develops only later. RS is hence a more important ecological trait than hitherto assumed. It constitutes an independent route of response to severe disturbance and its ecological effects and evolutionary patterns differ from stem-based clonality.     

Morphological assembly mechanisms in Neotropical bat assemblages and ensembles within a landscape

Empirical studies on bat assemblages have shown that richness is not appreciably influenced by local processes such as ecological interactions. However, most of these studies have been done in large areas that include high heterogeneity, and they analyse all bat species within such areas, and thus they may be not reflecting local but supra-community conditions. We followed an ecomorphological approach to assess how bat assemblages of species from the families Phyllostomidae and Mormoopidae, and ensembles of frugivorous bats, are assembled in local habitats within a single landscape. We measured the volume of the space defined by wing morphology and quantified the average distance between species within such a volume. Then, we related these measures to local richness. Such relationships were contrasted against relationships with random assemblages to test for statistical differences. At the ensemble level of organization, we found that the frugivorous bat morphological assembly mechanism is different from random patterns, and it corresponds to the volume-increasing model. On the other hand, bat assembly mechanisms may be ubiquitous at the assemblage level, because groups of species coexisting in a local habitat and delimited only by phylogeny include more than one ecological group with no potential to interact. Assembling processes are crucial to an understanding of species diversity in local communities, and ecomorphological analyses are very promising tools that may help in their study.     

Integrating species distribution modelling into decision-making to inform conservation actions

Species distribution models (SDMs) have been widely tagged as valuable tools in a variety of conservation assessments to address pressing conservation problems. However, these solutions could be hampered by difficulties to overcome the knowledge-action boundary between conservation and modelling practice. These difficulties have been well typified in the ecological modelling sphere, but a specific conceptual framework on how to bridge this gap is still lacking. This work reports successful examples on how to use SDMs to identify the most favourable habitats for implementing conservation management actions. We use these examples to discuss about the three main topics that deserve special attention to help enhance information flow between practitioners and modellers: the decision context, the modelling framework and the spatial products. Finally, we suggest some practical solutions to improve applications of effective conservation action on the ground. We emphasize the importance of matching modelling goals and decision targets by a close collaboration of modellers with decision makers and species experts. Moreover, we highlight the key role of clear and useful spatial products to provide relevant and timely feedback to increase understanding and promote utilisation by conservation practitioners, and to inform and involve targeted audiences.     

Hybridization at an ecotone: ecological and genetic barriers between three Iberian vipers

The formation of stable genetic boundaries between emerging species is often diagnosed by reduced hybrid fitness relative to parental taxa. This reduced fitness can arise from endogenous and/or exogenous barriers to gene flow. Although detecting exogenous barriers in nature is difficult, we can estimate the role of ecological divergence in driving species boundaries by integrating molecular and ecological niche modelling tools. Here, we focus on a three‐way secondary contact zone between three viper species (Vipera aspis, V. latastei and V. seoanei) to test for the contribution of ecological divergence to the development of reproductive barriers at several species traits (morphology, nuclear DNA and mitochondrial DNA). Both the nuclear and mitochondrial data show that all taxa are genetically distinct and that the sister species V. aspis and V. latastei hybridize frequently and backcross over several generations. We find that the three taxa have diverged ecologically and meet at a hybrid zone coincident with a steep ecotone between the Atlantic and Mediterranean biogeographical provinces. Integrating landscape and genetic approaches, we show that hybridization is spatially restricted to habitats that are suboptimal for parental taxa. Together, these results suggest that niche separation and adaptation to an ecological gradient confer an important barrier to gene flow among taxa that have not achieved complete reproductive isolation.     

Exploring tree-habitat associations in a Chinese subtropical forest plot using a molecular phylogeny generated from DNA barcode loci

Elucidating the ecological mechanisms underlying community assembly in subtropical forests remains a central challenge for ecologists. The assembly of species into communities can be due to interspecific differences in habitat associations, and there is increasing evidence that these associations may have an underlying phylogenetic structure in contemporary terrestrial communities. In other words, by examining the degree to which closely related species prefer similar habitats and the degree to which they co-occur, ecologists are able to infer the mechanisms underlying community assembly. Here we implement this approach in a diverse subtropical tree community in China using a long-term forest dynamics plot and a molecular phylogeny generated from three DNA barcode loci. We find that there is phylogenetic signal in plant-habitat associations (i.e. closely related species tend to prefer similar habitats) and that patterns of co-occurrence within habitats are typically non-random with respect to phylogeny. In particular, we found phylogenetic clustering in valley and low-slope habitats in this forest, indicating a filtering of lineages plays a dominant role in structuring communities in these habitats and we found evidence of phylogenetic overdispersion in high-slope, ridge-top and high-gully habitats, indicating that distantly related species tended to co-occur in these high elevation habitats and that lineage filtering is less important in structuring these communities. Thus we infer that non-neutral niche-based processes acting upon evolutionarily conserved habitat preferences explain the assembly of local scale communities in the forest studied.     

Evaluating the ecological realism of plant species distribution models with ecological indicator values

Species distribution models (SDMs) are routinely applied to assess current as well as future species distributions, for example to assess impacts of future environmental change on biodiversity or to underpin conservation planning. It has been repeatedly emphasized that SDMs should be evaluated based not only on their goodness of fit to the data, but also on the realism of the modeled ecological responses. However, possibilities for the latter are hampered by limited knowledge on the true responses as well as a lack of quantitative evaluation methods. Here we compared modeled niche optima obtained from European-scale SDMs of 1476 terrestrial vascular plant species with empirical ecological indicator values indicating the preferences of plant species for key environmental conditions. For each plant species we first fitted an ensemble SDM including three modeling techniques (GLM, GAM and BRT) and extracted niche optima for climate, soil, land use and nitrogen deposition variables with a large explanatory power for the occurrence of that species. We then compared these SDM-derived niche optima with the ecological indicator values by means of bivariate correlation analysis. We found weak to moderate correlations in the expected direction between the SDM-derived niche optima and ecological indicator values. The strongest correlation occurred between the modeled optima for growing degree days and the ecological indicator values for temperature. Correlations were weaker for SDM-derived niche optima with a more distal relationship to ecological indicator values (notably precipitation and soil moisture). Further, correlations were consistently highest for BRT, followed by GLM and GAM. Our method gives insight into the ecological realism of modeled niche optima and projected core habitats and can be used to improve SDMs by making a more informed selection of environmental variables and modeling techniques.