Danian cold‐water corals from the Baunekule facies,Faxe Formation,Denmark: a rare taphonomic window of a coral mound flank habitat

Well‐preserved cold‐water corals are comparatively rare in the fossil record. This is partly due to the very low fossilization potential of the predominantly aragonitic corals but also due to the fact that coral ecosystems of deep water are a geologically young development. A Middle Danian cold‐water coral mound complex is well exposed in Faxe Quarry, Denmark. The coral mounds are intercalated with bryozoan mounds of various sizes and form the Faxe Formation. The coral limestone displays large variations in diagenesis, and this complicates the palaeoecological reconstructions. However, the Baunekule facies from the Faxe Formation contain a well‐preserved originally aragonitic and calcitic fauna. The aragonitic skeletons have been recrystallized to calcite during early diagenesis and the excellent preservation makes taxonomic identifications straightforward. A diverse fauna of ten scleractinian coral species, nine stylasterine coral species and seven octocoral species has been described from the Baunekule facies. The fossil fauna represents an ecological niche between the dead coral framework and coral rubble on a flank of a growing Dendrophyllia coral mound with multiple colonization events. The diversity and relative abundance of the fossil scleractinian corals are comparable to the modern settings in the NE Atlantic and Mediterranean. The distribution and diversity of the octocorals and the stylasterine corals are suggested to represent coral gardens as described from modern setting in the NE Pacific. The presence of a diverse and abundant stylasterine fauna suggests a stable palaeoenvironment, probably in a bathymetric depth range of 200–400 metre.     

Comparison of deep-water coral reefs and lithoherms off southeastern USA

Two types of deep-water coral bioherms occur off the coast of southeastern United States: Oculina and Lophelia/Enallopsammia. The deep-water Oculina bioherms form an extensive reef system at depths of 70–100 m along the shelf edge off central eastern Florida. These reefs are comprised of numerous pinnacles and ridges, 3–35 m in height. Each pinnacle is a bank of unconsolidated sediment and coral debris that is capped on the slopes and crest with living and dead colonies of Oculina varicosa, the ivory tree coral. In comparison, deep-water reefs of Lophelia pertusa and Enallopsammia profunda corals occur at depths of 500–850 m (maximum 150-m relief) along the base of the Florida-Hatteras slope in the Straits of Florida. On the western edge of the Blake Plateau off South Carolina and Georgia, 54-m high banks of Enallopsammia and Lophelia occur at depths of 490–550 m, whereas on the eastern edge of the plateau the reefs form structures 146 m in height and at depths of 640–869 m. The geomorphology and functional structure of both the Oculina and Lophelia reefs are similar. North of Little Bahama Bank, at depths of 1000–1300 m, a region of bioherms is dominated by the coral Solenosmilia sp.; Lophelia is reportedly absent. This paper summarizes 25 years of submersible studies on the deep-water Oculina reefs, describes submersible reconnaissance of deep-water Lophelia reefs off the southeastern United States, and contrasts these types of bioherms with the deep-water lithoherms in the Straits of Florida west of the Bahamas.     

The deep-water coral Lophelia pertusa in Norwegian waters: distribution and fishery impacts

The paper presents documentation on the distribution of, and damages to, deep-water reefs of the coral Lophelia pertusa in Norwegian waters. The reef areas have traditionally been rich fishing grounds for long-line and gillnet fisheries, and the coral habitat is known to support a high diversity of benthic species. Anecdotal reports claim that trawlers often use the gear, wires, chains and trawl doors to crush the corals and clear the area before fishing starts. To get an overview of the situation, information about the distribution and damage were collected from the literature, fishermen, and our own investigations. The results show that the corals are abundant particularly on the mid Norwegian continental shelf between 200 and 400 m depth. In general it seems that the largest densities are distributed along the continental break and at ridges of morainic origin. The reports from fishermen suggested severe damage to the corals and in situ observations using ROV confirmed the presence of mechanically damaged corals located on trawling grounds. A first estimate of the fishery impact indicates that between 30 and 50% of the reef areas are damaged or impacted. Fishermen claim that catches are significantly lowered in areas where the reefs are damaged. Potential ecological consequences of the destruction are discussed.     

Chronic parrotfish grazing impedes coral recovery after bleaching

Coral bleaching, in which corals become visibly pale and typically lose their endosymbiotic zooxanthellae (Symbiodinium spp.), increasingly threatens coral reefs worldwide. While the proximal environmental triggers of bleaching are reasonably well understood, considerably less is known concerning physiological and ecological factors that might exacerbate coral bleaching or delay recovery. We report a bleaching event in Belize during September 2004 in which Montastraea spp. corals that had been previously grazed by corallivorous parrotfishes showed a persistent reduction in symbiont density compared to intact colonies. Additionally, grazed corals exhibited greater diversity in the genetic composition of their symbiont communities, changing from uniform ITS2 type C7 Symbiodinium prior to bleaching to mixed assemblages of Symbiodinium types post-bleaching. These results suggest that chronic predation may exacerbate the influence of environmental stressors and, by altering the coral-zooxanthellae symbiosis, such abiotic-biotic interactions may contribute to spatial variation in bleaching processes.     

Beta diversity of cold-water coral reef communities off western Scotland

Spatial heterogeneity in coral reef communities is well documented. This “species turnover” (beta diversity) on shallow warm-water reefs strongly conforms to spatial gradients in the environment as well as spatially autocorrelated biotic processes such as dispersal and competition. But the extent to which the environment and spatial autocorrelation create beta diversity on deep cold-water coral reefs such as those formed by Lophelia pertusa (Scleractinia) is unknown. The effects of remotely sensed and ground-truthed data were tested on the community composition of sessile suspension-feeding communities from the Mingulay Reef Complex, a landscape of inshore Lophelia reefs off the Scottish west coast. Canonical correspondence analysis determined that a statistically significant proportion (68%) of the variance in community composition could be explained by remotely sensed environmental variables (northerly and easterly aspect, seabed rugosity, depth), ground-truthed environmental variables (species richness and reef macrohabitat) and geospatial location. This variation was further partitioned into fractions explained by pure effects of the environment (51%), spatially structured environmental variables (12%) and spatial autocorrelation (5%). Beta diversity in these communities reflected the effects of both measured and unmeasured and spatially dependent environmental variables that vary across the reef complex, i.e., hydrography. Future work will quantify the significance and relative contributions of these variables in creating beta diversity in these rich communities.     

Franken Mound: facies and biocoenoses on a newly-discovered “carbonate mound” on the western Rockall Bank,NE Atlantic

Cold-water coral carbonate mounds are widespread along the Irish continental margin. Whereas the Porcupine Seabight and the Rockall Trough are relatively well studied with regard to mound topography, coral coverage, and benthic life diversity, the situation on the western Rockall Bank is rather unknown. Detailed facies and biocoenoses mapping based on video footage analyses was conducted on the newly-discovered Franken Mound. Facies were identified ranging between cliff-like to planar hardgrounds and soft sediments that are partly rippled. A variety of biocoenoses are associated with these facies comprising discrete live coral colonies, dense live and dead coral framework coverage, abundant to scattered coral debris, and a soft sediment faunal community, whereas the latter is three times less speciose as biocoenoses containing live framework-building corals. The facies and biocoenosis classes are supplemented by exposed dropstones, lost fishery nets, and rubbish. The distribution of the classes clearly indicates a close relationship with local current effects and current intensification. Due to the dominance of dead coral framework and the partially exposed internal sediment sequences on the mound flanks, it is assumed that Franken Mound is approaching the “mound retirement” mound growth state.     

Long-term coral community records from Lugger Shoal on the terrigenous inner-shelf of the central Great Barrier Reef,Australia

Long-term (millennial timescale) records of coral community structure can be developed from the analysis of corals preserved in radiometrically dated reef cores. Here, we present such a record (based on six cores) from Lugger Shoal, a turbid zone, nearshore reef on the inner-shelf of the central Great Barrier Reef. Lugger Shoal initiated growth ~800 cal yBP. It is constructed of large in situ Porites bommies, between which a framework of coral rubble (dominated by Acropora pulchra, Montipora mollis, Galaxea fascicularis and Cyphastrea serailia) has accumulated. Reef accretion occurred under conditions of net long-term fine-grained, terrigenous sediment accumulation, and with a coral community dominated throughout by a consistent, but low diversity, suite of coral taxa. This dataset supports recent suggestions that nearshore coral communities that establish themselves under conditions that are already close to the thresholds for coral survival may be resilient to water quality deteriorations associated with human activities.     

Bacterial profiling of White Plague Disease in a comparative coral species framework

Coral reefs are threatened throughout the world. A major factor contributing to their decline is outbreaks and propagation of coral diseases. Due to the complexity of coral-associated microbe communities, little is understood in terms of disease agents, hosts and vectors. It is known that compromised health in corals is correlated with shifts in bacterial assemblages colonizing coral mucus and tissue. However, general disease patterns remain, to a large extent, ambiguous as comparative studies over species, regions, or diseases are scarce. Here, we compare bacterial assemblages of samples from healthy (HH) colonies and such displaying signs of White Plague Disease (WPD) of two different coral species (Pavona duerdeni and Porites lutea) from the same reef in Koh Tao, Thailand, using 16S rRNA gene microarrays. In line with other studies, we found an increase of bacterial diversity in diseased (DD) corals, and a higher abundance of taxa from the families that include known coral pathogens (Alteromonadaceae, Rhodobacteraceae, Vibrionaceae). In our comparative framework analysis, we found differences in microbial assemblages between coral species and coral health states. Notably, patterns of bacterial community structures from HH and DD corals were maintained over species boundaries. Moreover, microbes that differentiated the two coral species did not overlap with microbes that were indicative of HH and DD corals. This suggests that while corals harbor distinct species-specific microbial assemblages, disease-specific bacterial abundance patterns exist that are maintained over coral species boundaries.     

Parrotfish abundance and selective corallivory on a Belizean coral reef

Parrotfish are important members of coral reef communities because they consume macroalgae that would otherwise outcompete reef-building corals for space. However, some Caribbean parrotfish species also feed directly on live corals, and thus have the potential to negatively impact coral fitness and survival. This study investigates selective grazing by parrotfish on particular coral species, differences in grazing incidence among reef habitats and intraspecific discrimination among colonies of several coral species. We also investigate spatial and temporal patterns of parrotfish species abundance across habitats on the Belize barrier reef, and examine correlations between parrotfish abundance and grazing intensity across reef habitats. We found that members of the Montastraea annularis species complex, major builders of Caribbean reefs, were preferred targets of parrotfish grazing across all reef habitats, while M. cavernosa, Agaricia agaricites, Diploria strigosa, Porites astreoides and Porites porites were not preferred; Siderastrea siderea was preferentially grazed only in the spur and groove habitats. Parrotfish grazing preferences varied across habitats; M. annularis was grazed most often in shallow habitats, whereas M. franksi was consumed more at depth. Although it was not possible to directly observe parrotfish grazing on corals, we did find a positive correlation between Sparisoma aurofrenatum abundance and M. franksi grazing incidence across habitats. Finally, when we compared our results to parrotfish abundances measured by a previous study, we found that Sparisoma viride and Sp. aurofrenatum, two species known to be corallivorous, had increased abundances between 1982 and 2004. In light of escalating threats on Caribbean reef corals, it would be important for future studies to evaluate the impact of parrotfish corallivory on coral survival.     

Acoustic mapping using a multibeam echosounder reveals cold-water coral reefs and surrounding habitats

Multibeam surveys were carried out in four areas to the west of Scotland where the coral Lophelia pertusa had previously been recorded. Distinctive seabed mounds were found in one area; video images from the mounds showed coral reef formation, and grab samples recovered L. pertusa reef framework and rubble. Skeleton samples were dated to 3,800 years BP. Grab samples contained 123 species of fauna. The reef structures, termed the Mingulay Reef Complex, were identified as topographic mound-like structures from the bathymetric data and were also visible on the backscatter images. The location of the reefs coincides with Atlantic bottom waters, close to a primary productivity centre and mixing zone, in an area where currents are likely to be accelerated by rocky seafloor ridges. This study shows that multibeam echosounders are powerful tools to locate and map deep-water coral reefs irrespective of water depth. Electronic Supplementary Material Supplementary material is available for this article at and is accessible for authorized users.     

Changes in coral assemblages during an outbreak of Acanthaster planci at Lizard Island, northern Great Barrier Reef (1995–1999)

Population outbreaks of crown-of-thorns starfish (Acanthaster planci L.) represent one of the most significant biological disturbances on tropical coral reefs and have the potential to devastate coral communities, thereby altering the biological and physical structure of reef habitats. This study reports on changes in area cover, species diversity and taxonomic composition of corals during an outbreak of A. planci at Lizard Island, in the northern Great Barrier Reef, Australia. Mean coral cover declined by 28.8% across ten locations studied. However, densities of A. planci, and their effects on local coral assemblages, were very patchy. Declines in coral cover were mostly due to the selective removal of certain coral taxa (mainly Acropora and Pocilloporidae corals); such that the greatest coral loss occurred at locations with highest initial cover of preferred coral prey. Most notably, coral assemblages in back-reef locations were transformed from topographically complex staghorn Acropora-dominated habitats, to relatively depauperate assemblages dominated by alcyonacean soft corals. Although coral loss was greatest among formerly dominant taxa (especially Acropora), effects were sufficiently widespread across different coral taxa, such that overall coral diversity tended to decline. Clearly, moderate outbreaks of A. planci have the potential to greatly alter community structure of coral communities even if they do not devastate live corals. Recovery in this instance is expected to be very rapid given that all coral taxa persisted, and effects were greatest among fast growing corals.     

Sub-rubble communities of Curaçao and Bonaire coral reefs

The distribution and abundance of sessile organisms under coral rubble has been studied at Bonaire and Curaçao, Netherlands Antilles. Species richness under rubble is extremely high with at least 367 species of which sponges, tunicates and bryozoans are the most important. Shallow sub-rubble communities can be considered refuges as the majority of these species are crypt-obligate. Sub-rubble communities may also have a preserve function for sponges, but do not harbour enough corals to ensure a quick coral recolonization of the reef surface after a major disaster. Cryptic community composition is affected by depth and pollution, and differs substantially between the two neighbouring islands, possibly as a result of different bottom characteristics. Biomass of the sub-rubble communities may contribute considerably to total reef biomass. Diversity varies inversely with increased depth and increased rubble size, possibly indicating abiotic control (e.g. physical disturbance by wave action and reef slope substrate collapse).     

Species richness of motile cryptofauna across a gradient of reef framework erosion

Coral reef ecosystems contain exceptionally high concentrations of marine biodiversity, potentially encompassing millions of species. Similar to tropical rainforests and their insects, the majority of reef animal species are small and cryptic, living in the cracks and crevices of structural taxa (trees and corals). Although the cryptofauna make up the majority of a reef??s metazoan biodiversity, we know little about their basic ecology. We sampled motile cryptofaunal communities from both live corals and dead carbonate reef framework across a gradient of increasing erosion on a reef in Pacific Panamá. A total of 289 Operational Taxonomic Units (OTUs) from six phyla were identified. We used species-accumulation models fitted to individual- and sample-based rarefaction curves, as well as seven nonparametric richness estimators to estimate species richness among the different framework types. All procedures predicted the same trends in species richness across the differing framework types. Estimated species richness was higher in dead framework (261?C370 OTUs) than in live coral substrates (112?C219 OTUs). Surprisingly, richness increased as framework structure was eroded: coral rubble contained the greatest number of species (227?C320 OTUs) and the lowest estimated richness of 47?C115 OTUs was found in the zone where the reef framework had the greatest vertical relief. This contradicts the paradigm that abundant live coral indicates the apex of reef diversity.     

Community involvement in management for maintaining coral reef resilience and biodiversity in southern Caribbean marine protected areas

Climate change is posing new challenges to conservation because management policies on protected coral reefs are less effective than they were before the current ecosystem degradation. Coral reefs, the most diverse and complex marine ecosystem provide economic services for millions, but are seriously threatened worldwide because reef-building corals are experiencing bleaching phenomena and a steady decline in abundance. The resources of a Marine Protected Area (MPA) in Cartagena, Colombia, are in constant decline, despite a current management plan and on-site staff, urging new conservation actions. A multidisciplinary team gathered to evaluate management effectiveness including biophysical, socioeconomic and governance indicators. Coral cover and fish diversity and abundance were low both inside and outside the MPA, which suggests a limited efficiency of management. Currently, the MPA is a reef with low coral cover and high algae cover as well as large dead coral areas, which are generally signs of highly degraded reef habitats. Live coral cover in the MPA was represented by pioneer coral species such as Agaricia tenuifolia and Porites astreoides. Nonetheless, 35% of the scleractinian species sampled in the area harbored more than one zooxanthellae symbiont, which suggests potential resistance and resilience against coral bleaching. Maintenance of trophic structure and functional diversity is an important endeavor that should be a priority for management in order to allow ecosystem resilience. Social and governance indicators showed low-income levels and few opportunities for communities living in and around the park, low governability, weak communication among stakeholders and with authorities at different levels. As a result, problems related to over exploitation of resources were commonplace in the MPA. These results reflect low adaptive capacity of communities to comply with restrictive conservation rules, showing that establishment of a protected area is a necessary but insufficient condition to guarantee conservation goals. Ignoring the role of local communities only will exacerbate the problems associated with natural resources. Involvement of communities in strategic ecosystems management appears to be a requisite to improve effectiveness of protected areas, and participatory strategies, such as co-management, offer opportunities to improve governability while letting communities adapt to MPA needs.     

Near‐term impacts of coral restoration on target species,coral reef community structure,and ecological processes

The global decline of corals has created an urgent need for effective, science‐based methods to augment coral populations and restore important ecosystem functions. To meet this challenge, the field of coral restoration has rapidly evolved over the past decade. However, despite widespread efforts to outplant corals and monitor survivorship, there is a shortage of information on the effects of coral restoration on reef communities or important ecosystem functions. To fill this knowledge gap, we examined the effects of restoration on three major criteria: diversity, community structure, and ecological processes. We conducted surveys of four restored sites in the Florida Keys ranging in restoration effort (500–2,300 corals outplanted) paired with surveys of nearby, unmanipulated control sites. Coral restoration successfully enhanced coral populations, increasing coral cover 4‐fold, but manifested in limited differences in coral and fish communities. Some restored sites had higher abundance of herbivorous fish, rates of herbivory, or more juvenile‐sized corals, but these effects were limited to individual reefs. Damselfish were consistently more abundant at restored compared to control sites. Despite augmenting target coral populations, 3 years of coral restoration has not facilitated many of the positive feedbacks that help reinforce coral success. In a time of increasingly frequent disturbances, it is urgent we hasten the speed at which reefs recover important ecological processes, such as herbivory and nutrient cycling, that make reefs more resistant and resilient if we are to achieve long‐term restoration success.     

Fungi populate deep-sea coral gardens as well as marine sediments in the Irish Atlantic Ocean

Fungi populate deep Oceans in extreme habitats characterized by high hydrostatic pressure, low temperature and absence of sunlight. Marine fungi are potential major contributors to biogeochemical events, critical for marine communities and food web equilibrium under climate change conditions and a valuable source of novel extremozymes and small molecules. Despite their ecophysiological and biotechnological relevance, fungal deep-sea biodiversity has not yet been thoroughly characterized. In this study, we describe the culturable mycobiota associated with the deepest margin of the European Western Continental Shelf: sediments sampled at the Porcupine Bank and deep-water corals and sponges sampled in the Whittard Canyon. Eighty-seven strains were isolated, belonging to 43 taxa and mainly Ascomycota. Ten species and four genera were detected for the first time in the marine environment and a possible new species of Arachnomyces was isolated from sediments. The genera Cladosporium and Penicillium were the most frequent and detected on both substrates, followed by Candida and Emericellopsis. Our results showed two different fungal communities: sediment-associated taxa which were predominantly saprotrophic and animal-associated taxa which were predominantly symbiotic. This survey supports selective fungal biodiversity in the deep North Atlantic, encouraging further mycological studies on cold water coral gardens, often overexploited marine habitats.     

Wave exposure shapes reef community composition and recovery trajectories at a remote coral atoll

In a time of unprecedented ecological change, understanding natural biophysical relationships between reef resilience and physical drivers is of increasing importance. This study evaluates how wave forcing structures coral reef benthic community composition and recovery trajectories after the major 2015/2016 bleaching event in the remote Chagos Archipelago, Indian Ocean. Benthic cover and substrate rugosity were quantified from digital imagery at 23 fore reef sites around a small coral atoll (Salomon) in 2020 and compared to data from a similar survey in 2006 and opportunistic surveys in intermediate years. Cluster analysis and principal component analysis show strong separation of community composition between exposed (modelled wave exposure > 1000 J m⁻³) and sheltered sites (< 1000 J m⁻³) in 2020. This difference is driven by relatively high cover of Porites sp., other massive corals, encrusting corals, soft corals, rubble and dead table corals at sheltered sites versus high cover of pavement and sponges at exposed sites. Total coral cover and rugosity were also higher at sheltered sites. Adding data from previous years shows benthic community shifts from distinct exposure-driven assemblages and high live coral cover in 2006 towards bare pavement, dead Acropora tables and rubble after the 2015/2016 bleaching event. The subsequent recovery trajectories at sheltered and exposed sites are surprisingly parallel and lead communities towards their respective pre-bleaching communities. These results demonstrate that in the absence of human stressors, community patterns on fore reefs are strongly controlled by wave exposure, even during and after widespread coral loss from bleaching events.

     

Vent and mound rugose coral associations from the Middle Devonian of Hamar Laghdad (Anti-Atlas, Morocco)

Peculiar associations of small, solitary, deep-water rugose corals are described from the Middle Devonian buildups situated in the easternmost part of Hamar Laghdad area of southern Morocco. The most of them are monospecific and consist of simplified taxon “Amplexus” florescens but one is polyspecific and composed of specimens belonging to four different species representing three families. These rugosan associations form isolated nest-like aggregations where numerous densely packed specimens are arranged mostly in life position. The polyspecific and two monospecific associations are interpreted as growing in close proximity to venting fields. They reveal a unique “calice-in-calice” recolonization pattern expressed by successive settlement of juvenile specimens in the calice of dead individuals. This pattern was presumably a consequence of selective survival of coral larvae settling in extreme vent habitats. Although, the “calice-in-calice” pattern is common in both, mono- and polyspecific associations, there are differences expressed in the character of larval attachments and various types of the calice fillings. The trophic interaction between corals and ostracods is discussed. Additionally, associations of “Amplexus” florescens, not displaying “calice-in-calice” pattern of growth have been found within the mound where polyspecific association occurs. These are interpreted as growing away from venting fields. Comparisons of Amplexus-type coral faunas with the other North African and European corals allow the classification of these ampleximorph rugosan taxa as characteristic biotic components of the Middle Devonian mound environments influenced by venting activity. Two new genera and species, Weyeraia prima and Vesiculolasma erfoudi, are introduced.     

Similar regional effects among local habitats on the structure of tropical reef fish and coral communities

Aim We examined data on corals and reef fishes to determine how particular local habitat types contribute to variation in community structure across regions covering gradients in species richness and how consistent this was over time. Location Great Barrier Reef (GBR), Australia. Methods We compared large‐scale (1300 km), long‐term (11 years) data on fishes and corals that were collected annually at fixed sites in three habitats (inshore, mid‐shelf and outer‐shelf reefs) and six regions (latitudinal sectors) along a gradient of regional species richness in both communities. We used canonical approaches to partition variation in community structure (sites × species abundance data matrices) into components associated with habitat, region and time and Procrustes analyses to assess the degree of concordance between coral and fish community structure. Results Remarkably similar patterns emerged for both fish and coral communities occupying the same sites. Reefs that had similar coral communities also had similar fish communities. The fraction of the community data that could be explained by regional effects, independent of pure habitat effects, was similar in both fish (33%) and coral (36.9%) communities. Pure habitat effects were slightly greater in the fish (31.3%) than in the coral (20.1%) community. Time explained relatively little variation (fish = 7.9%, corals = 9.6%) compared with these two spatial factors. Conclusions Our results indicate either that fish and coral communities were structured in similar ways by processes associated with region, habitat and time, or that the variation in fish community structure tracked variation associated with the coral communities at these sites and thereby reflects an indirect link between the environment and the structure of fish communities mediated by corals. Irrespective of the causes of such commonality, we demonstrate that community structure, not just species richness, can be related to both habitat differences and regional setting simultaneously.