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1.
The structural properties of four gelatin fractions in mixture with sucrose and glucose syrup have been investigated extensively using small deformation dynamic oscillation. The total level of solids was 80%, the number average molecular weight of the protein ranged from 29.2 to 68 kD, and the temperatures were between 60 and -60 degrees C. Remarkably, the nature of the time and temperature dependence on the viscoelastic functions of all samples could be reduced to master curves using horizontal shift factors. The construction of master curves indicates a common mechanism of structure formation, which, in accordance with the synthetic polymer literature, comprises the rubbery zone, glass transition region, and glassy state. Application of Ferry's free-volume formalism and Rouse theory suggests that there is no change in the thermodynamic state of materials during vitrification, with changes in molecular weight simply introducing shifts in the time scale and temperature range of contributions to viscoelasticity. The thermorheological simplicity allowed development of the concept of \"rheological\" Tg. This was defined as the point between free-volume phenomena of the polymeric backbone occurring in the glass transition region and an energetic barrier to rotation required for local chain rearrangements in the glassy state. Mechanical relaxation and retardation distribution functions were calculated, thus obtaining values for the effective friction coefficient per monomer unit of the protein. It appears that the local friction coefficient is governed by a linear relationship between fractional free volume and the decreasing molecular weight of the protein, which introduces additional voids due to molecular ends. 相似文献
2.
《Molecular simulation》2012,38(8-9):762-771
Vinyl polymers offer the particularity that small modifications in their microscopic structures can lead to drastic effects at the macroscopic level. Full-atomistic simulations are thus genuinely invaluable for probing the results of such variations in backbone architectures, alternations of side chains and so on. However, the link between the microscale and the macroscale is not straightforward, and as a consequence, establishing multi-scale relationships requires great care. In this article, we review our atomistic simulation studies of vinyl polymers by focusing on the approach that we have developed in recent years in order to justify any ensuing analyses and interpretations. We first examine how to achieve mechanical equilibrium and cubic symmetry for the initial amorphous configurations of polymers. The reproducibility of the simulation results and their linear correlations with experimental data are two essential criteria for corroborating the validity of our method. Different vinyl architectures are then explored, and we demonstrate correlations of the simulation outcomes with existing theories. The crystalline contribution was also similarly studied, and the data provided evidence for the appropriateness of our approach. Our methods have validated their power to capture the effects of any local phenomena and their potential consequences in the macroscopic realm of these materials. 相似文献
3.
Pierre Ronceray 《Molecular simulation》2016,42(13):1149-1156
The expression of the free energy of a liquid in terms of an explicit decomposition of the particle configurations into local coordination clusters is examined. We argue that the major contribution to the entropy associated with structural fluctuations arises from the local athermal constraints imposed by the overlap of adjacent coordination shells. In the context of the recently developed Favoured Local Structure model [Soft Matt. 11, 3322 (2015)], we derive explicit expressions for the structural energy and entropy in the high-temperature limit, compare this approximation with simulation data and consider the extension of this free energy to the case of spatial inhomogeneity in the distribution of local structures. 相似文献
4.
Electrospinning of natural polymer nanofibers useful for biomedical applications often requires the use of cytotoxic organic solvents. In this study, gelatin nanofibers are electrospun from phosphate buffer saline/ethanol binary mixtures as a benign solvent at ambient temperature. The influences of ionic strength, ethanol concentration, and gelatin concentration on the electrospinnability of gelatin solutions and the fiber microarchitectures are analyzed. The electrospun scaffolds retain their morphologies during vapor‐phase crosslinking with glutaraldehyde in ethanol and the subsequent removal of salts contained in the nanofibers via water rinsing. When fully hydrated, the mechanically preconditioned scaffolds display a Young's modulus of 25.5 ± 5.3 kPa, tensile strength of 55.5 ± 13.9 kPa, deformability of 160 ± 15%, and resilience of 89.9 ± 1.8%. When cultured on the gelatin scaffolds, 3T3 fibroblasts displayed spindle‐like morphology, similar to the cell's normal morphology in a 3D extracellular matrix. © 2012 Wiley Periodicals, Inc. Biopolymers 97:1026–1036, 2012. 相似文献
5.
M. Weik G. Kryger A. M. M. Schreurs B. Bouma I. Silman J. L. Sussman P. Gros J. Kroon 《Acta Crystallographica. Section D, Structural Biology》2001,57(4):566-573
The solvent behaviour of flash‐cooled protein crystals was studied in the range 100–180 K by X‐ray diffraction. If the solvent is within large channels it crystallizes at 155 K, as identified by a sharp change in the increase of unit‐cell volume upon temperature increase. In contrast, if a similar amount of solvent is confined to narrow channels and/or individual cavities it does not crystallize in the studied temperature range. It is concluded that the solvent in large channels behaves similarly to bulk water, whereas when confined to narrow channels it is mainly protein‐associated. The analogy with the behaviour of pure bulk water provides circumstantial evidence that only solvent in large channels undergoes a glass transition in the 100–180 K temperature range. These studies reveal that flash‐cooled protein crystals are arrested in a metastable state up to at least 155 K, thus providing an upper temperature limit for their storage and handling. The results are pertinent to the development of rational crystal annealing procedures and to the study of temperature‐dependent radiation damage to proteins. Furthermore, they suggest an experimental paradigm for studying the correlation between solvent behaviour, protein dynamics and protein function. 相似文献
6.
Sally Adel 《Journal of liposome research》2014,24(2):136-149
Context: Drotaverine hydrochloride (DRT) is used to treat gastrointestinal spasms accompanied with diarrhoea. Hence, the drug suffers from brief residence in the highly moving intestine during diarrhoea which leads to poor bioavailability and frequent dosing.Objective: This study aimed to extend DRT residence in the stomach.Methods: Calcium alginate floating beads were prepared using sodium alginate, isopropylmyristate (oil), and Gelucire® 43/01 (lipid) adopting emulsion gelation technique. The beads were evaluated for their floating ability, DRT entrapment efficiency and in-vitro release. Gelucire® 43/01 /oil-based beads of the selected formula were coated using ethylcellulose and different plasticizers as polyethylene glycol 400 and triethyl citrate to retard the drug release. The coated beads were re-characterized. Finally, the best formulae were investigated for their in-vivo floating ability in dogs besides their delivery to the systemic circulation compared to drug powder in human volunteers.Results: Incorporation of Gelucire® 43/01 to oil-based beads enhanced the in-vitro performance of the beads. Coated beads prepared using drug:sodium alginate ratio of 1:3 (w/w), 20% (w/v) isopropylmyristate, 20% (w/v) Gelucire® 43/01 showed promising in-vitro performance. The beads floated for 12?h in the dogs’ stomach and produced three-fold increase of the total amount of DRT absorbed within 24?h compared to that of DRT powder.Conclusions: Gelucire® 43/01 /isopropylmyristate-based calcium alginate floating beads coated with ethylcellulose using either PEG 400 or TEC as plasticizers proved to be a successful dosage form in extending DRT release. 相似文献
7.
Near-infrared (NIR) spectroscopic analysis of noncrystalline polyols and saccharides (e.g., glycerol, sorbitol, maltitol,
glucose, sucrose, maltose) was performed at different temperatures (30–80°C) to elucidate the effect of glass transition on
molecular interaction. Transmission NIR spectra (4,000–12,000 cm−1) of the liquids and cooled-melt amorphous solids showed broad absorption bands that indicate random configuration of molecules.
Heating of the samples decreased an intermolecular hydrogen-bonding OH vibration band intensity (6,200–6,500 cm−1) with a concomitant increase in a free and intramolecular hydrogen-bonding OH group band (6,600–7,100 cm−1). Large reduction of the intermolecular hydrogen-bonding band intensity at temperatures above the glass transition (T
g) of the individual solids should explain the higher molecular mobility and lower viscosity in the rubber state. Mixing of
the polyols with a high T
g saccharide (maltose) or an inorganic salt (sodium tetraborate) shifted both the glass transition and the inflection point
of the hydrogen-bonding band intensity to higher temperatures. The implications of these results for pharmaceutical formulation
design and process monitoring (PAT) are discussed. 相似文献
8.
Abstract The glass transition of a disparate-size binary liquid and the delocalization of small particles in a glassy matrix are studied within a mode-coupling theory. The density-relaxation functions together with their long-time limits are investigated by solving space- and time-dependent mode-coupling equations numerically. We focus our attention on the effective-potential fluctuations produced by the glassy matrix, which the small particles will experience when they move through the matrix. It is found that in a strongly localized state the spatial correlations of effective-potential fluctuations are well represented by a Gaussian function. For the small particles with a long localization length, on the other hand, the effective potential is no longer Gaussian, reflecting the structure of the glassy matrix established by the big particles. The time-dependence of the effective potential is also investigated. 相似文献
9.
为探究明胶(G)、海藻酸钠(SA),沙蒿胶(ASKG)对复合水凝胶的力学性能、溶胀和保湿性能的影响,采用共混-离子交联法制备海藻酸钠/明胶/沙蒿胶复合水凝胶,并对制得的水凝胶进行结构表征和溶血率测试。结果表明:当G质量分数为2.5%,SA为1.5%,ASKG为0.7%时,复合水凝胶压缩强度达到427.2 kPa,拉伸强度达到563.449 kPa,断裂伸长率为117%,溶胀率为744%,且具有较好的保湿性能。红外光谱表明,由于沙蒿胶中存在大量羟基,因此加入沙蒿胶后在3 300 cm-1~3 600 cm-1羟基峰形变宽。G/SA/ASKG复合水凝胶溶血率低于5%,具有较好的网络孔结构和血液相容性,为复合水凝胶在医用敷料方面的应用提供一定的参考价值。 相似文献
10.
阿胶,新阿胶,黄明胶,马皮胶,杂皮胶的质量对比研究:Ⅰ.氨基酸分析 总被引:1,自引:0,他引:1
本文用835-50型氨基酸自动分析仪测定了阿胶、新阿胶、黄明胶、马皮胶和杂皮胶中游离氨基酸和总氨基酸的含量,并计算出游离氨基酸、总氨基酸按侧链基团分类和按医药用途分类的相对含量。结果表明,各种氨基酸含量一般以驴皮胶为较高,但与其他几种胶比较并无显著差异,似可以猪皮马皮、牛皮代替驴皮。这也说明,单从氨基酸的含量来鉴别胶的种类和质量似乎不可行。 相似文献
11.
Matthew Warkentin Robert E. Thorne 《Acta Crystallographica. Section D, Structural Biology》2010,66(10):1092-1100
The temperature‐dependence of radiation damage to thaumatin crystals between T = 300 and 100 K is reported. The amount of damage for a given dose decreases sharply as the temperature decreases from 300 to 220 K and then decreases more gradually on further cooling below the protein‐solvent glass transition. Two regimes of temperature‐activated behavior were observed. At temperatures above ∼200 K the activation energy of 18.0 kJ mol−1 indicates that radiation damage is dominated by diffusive motions in the protein and solvent. At temperatures below ∼200 K the activation energy is only 1.00 kJ mol−1, which is of the order of the thermal energy. Similar activation energies describe the temperature‐dependence of radiation damage to a variety of solvent‐free small‐molecule organic crystals over the temperature range T = 300–80 K. It is suggested that radiation damage in this regime is vibrationally assisted and that the freezing‐out of amino‐acid scale vibrations contributes to the very weak temperature‐dependence of radiation damage below ∼80 K. Analysis using the radiation‐damage model of Blake and Phillips [Blake & Phillips (1962), Biological Effects of Ionizing Radiation at the Molecular Level, pp. 183–191] indicates that large‐scale conformational and molecular motions are frozen out below T = 200 K but become increasingly prevalent and make an increasing contribution to damage at higher temperatures. Possible alternative mechanisms for radiation damage involving the formation of hydrogen‐gas bubbles are discussed and discounted. These results have implications for mechanistic studies of proteins and for studies of the protein glass transition. They also suggest that data collection at T ≃ 220 K may provide a viable alternative for structure determination when cooling‐induced disorder at T = 100 is excessive. 相似文献
12.
13.
Stewart CM Cole MB Legan JD Slade L Schaffner DW 《Journal of applied microbiology》2005,98(1):193-202
AIM: To determine if cell death from osmotic stress is because of lack of sufficient energy to maintain cell metabolism. Additionally, the solute-specific effect of five humectants on bacterial osmoregulation and cell survival was examined. METHODS AND RESULTS: Staphylococcus aureus was placed into 84% relative humidity (RH) broth (five humectants used individually). ATP, ADP and cell viability measurements were determined over time. The results indicate that ATP is not the limiting factor for cell survival under excessive osmotic stress. Although the same RH was achieved with various humectants, the rates of cell death varied greatly as did the sensitivities of the cell populations to osmotic stress. CONCLUSIONS: The results from this study provide strong evidence that mechanisms of osmotic inactivation depend on the solute. The molecular mobility of the system may be an important means to explain these differences. SIGNIFICANCE AND IMPACT OF THE STUDY: By bringing together an understanding of solute-specific effects, microbial physiology and genetics, the mechanisms of inactivation of micro-organisms by solute-specific osmotic stress may be elucidated, and this knowledge may then be exploited to ensure the production of high quality, safe foods. 相似文献
14.
Vitrification has been used to successfully cryopreserve cells and tissues for over 60 years. Glass transition temperature (T g) of the vitrification is a critical parameter, which has been investigated experimentally. In this study, an isothermal–isobaric molecular simulation (NPT-MD) is proposed to investigate the glass transition and T g of such vitrification solution. The cohesive energy density, solubility parameter (δ) and bulk modulus of the solution during the process of the glass transition are investigated as well. The results indicate that these properties as functions of temperature can give a definite inflexion; thus, these properties can be used to predict T g more accurately than the heat capacity (C p ), density (ρ), volume (V) and radial distribution function (rdf). At the same time, the predicted values of T g agree well with the experimental results. Therefore, molecular dynamics simulation is a potential method for investigating the glass transition and T g of the vitrification solutions. 相似文献
15.
Molecular dynamics simulations (NPT ensembles, 1 atm) using the all atom force field AMB99C (F. A. Momany and J. L. Willett, Carbohydrate Research, Vol. 326, pp 194-209 and 210-226), are applied to a periodic cell containing ten maltodecaose fragments and TIP3P water molecules. Simulations were carried out at 25 K intervals over a range of temperatures above and below the expected glass transition temperature, T(g), for different water concentrations. The amorphous cell was constructed through successive dynamic equilibration steps at temperatures above T(g) and the temperature lowered until several points of reduced slope (1/T vs volume) were obtained. This procedure was carried out at each hydration level. Each dynamics simulation was continued until the volume remained constant without up or down drift for at least the last 100 ps. For a given temperature, most simulations required 400-600 ps to reach an equilibrium state, but longer times were necessary as the amount of water in the cell was reduced. A total of more than 30 ns of simulations were required for the complete study. The T(g) for each hydrated cell was taken as that point at which a discontinuity in slope of the volume (V), potential energy (PE), or density (rho) vs 1/T was observed. The average calculated T(g) values were 311, 337, 386, and 477 K for hydration levels of 15.8, 10, 5, and 1%, respectively, in generally good agreement with experimental values. The T(g) for anhydrous amylose is above the decomposition temperature for carbohydrates and so cannot be easily measured. However, it has also been difficult to obtain a value of T(g) for anhydrous amylose using simulation methods. Other molecular parameters such as end-to-end distances, mean square distributions, and pair distributions are discussed. 相似文献
16.
S. Khodadadi A. MalkovskiyA. Kisliuk A.P. Sokolov 《Biochimica et Biophysica Acta - Proteins and Proteomics》2010,1804(1):15-19
We performed Raman and Brillouin scattering measurements to estimate glass transition temperature, Tg, of hydrated protein. The measurements reveal very broad glass transition in hydrated lysozyme with approximate Tg ∼ 180 ± 15 K. This result agrees with a broad range of Tg ∼ 160–200 K reported in literature for hydrated globular proteins and stresses the difference between behavior of hydrated biomolecules and simple glass-forming systems. Moreover, the main structural relaxation of the hydrated protein system that freezes at Tg ∼ 180 K remains unknown. We emphasize the difference between the “dynamic transition”, known as a sharp rise in mean-squared atomic displacement <r2> at temperatures around TD ∼ 200–230 K, and the glass transition. They have different physical origin and should not be confused. 相似文献
17.
Abstract Molecular dynamics simulation of some alkali metasilicates (M2SiO3, M = Li, Na, K) was performed to compare glass transition temperatures, Tg , defined in various ways. The potential parameters derived from ab initio MO calculations were used and found to reproduce the inflection of V-T relation on cooling the system. The Tg defined by the inflection point corresponds well to that defined by geometrical changes of coordination polyhedra found in previous work. The self-diffusion coefficients of the alkali ions in higher temperature regions were shown to be related to the amount of free volume in these systems. 相似文献
18.
The phase transition of bilayers of 1,2-dibehenoyl-sn-glycero-3-phosphocholine (DBPC) induced by ice (H2O and D2O) melting has been investigated by infrared and Raman spectroscopy. Spectral changes observed at this transition are smaller at lower water content. These spectral changes are interpreted in terms of increased molecular mobility. Slightly different temperature dependencies are observed for various spectral parameters between samples dispersed in H2O and D2O. 相似文献
19.
The relaxation kinetics of aqueous lipid dispersions after a pressure jump (p-jump) were investigated using time-resolved
FTIR spectroscopy. The methylene stretching vibrational band and the carbonyl band were analyzed to detect changes in conformational
order of the hydrocarbon chains and to follow the degree of hydration of the head group, respectively. The kinetics of the
transition was found to consist of multiple processes with relaxation constants from seconds down to milliseconds. Faster
processes are also present, but could not be resolved by our instrument. This is the first investigation showing directly
the time resolved change in chain order in lipid bilayers induced by a p-jump. The results obtained with this IR detection
method support previous results that the change in chain order after a perturbation is a multi-step process with the initial
molecular events occurring with time constants shorter than milliseconds. 相似文献
20.
本文用电感耦合等离子体发射光谱法测定了对人体具有营养、生理及临床意义的27种微量元素。结果表明,各类胶中这些元素的含量均有一个比较狭小的变动范围,可供质量鉴别时参考。除杂皮胶有多种元素含量超出各自的变动范围之外,阿胶、新阿胶、黄明胶中各元素含量比较相近,似可用猪皮、牛皮代用驴皮。阿胶的补血作用可能与其含铁量较高有关,阿胶的止血作用可能与其含钙有关。 相似文献