Barrier function of the cell wall during uptake of nickel ions

Cell walls were isolated from roots of six plant species to study their ion-exchange capacity for nickel ions (S _Ni) at Ni²⁺ concentration of 10⁻³ M. The S _Ni values varied depending on the plant species from 50 to 150 μmol Ni²⁺ per gram dry wt; the sorption capacity increased in a row: Poaceae < Chenopodiaceae < Fabaceae. At pH 5 the sorption capacity of cell walls for nickel ions was determined by the presence of carboxyl groups of polygalacturonic acid in the polymeric cell-wall matrix. In all cases the ion-exchange capacity of cell walls was higher at pH 8 than at pH 5, indicating that Ni²⁺ binds also to a carboxyl group different from that of polygalacturonic acid. Irrespective of plant species, the presence of EDTA in the solution diminished drastically the absorption capacity of cell walls for Ni²⁺. It is concluded that the presence of 10⁻³ M EDTA weakens the defense properties of cell walls. The sequestration of Ni²⁺ in the cell wall can be considered as an effective means of plant cell defense against elevated concentrations of nickel ions in the external medium.     

Evaluation of fermentation waste (Corynebacterium glutamicum) as a biosorbent for the treatment of nickel(II)-bearing solutions

This research highlights the possibility of employing a fermentation industry waste (Corynebacterium glutamicum) for the removal of nickel(II) ions from aqueous solution. Furthermore, it necessitates the importance of detailed examinations on the possible differences in the biosorption performance, even for the same biomass, but from different origins. Two types of C. glutamicum, obtained from different industrial sources, were used in this study. With respect to nickel speciation and biosorption performance, pH 6 was identified as an optimal condition. Of the two types of C. glutamicum used, the biomass with excess negatively charged groups performed well in the binding of Ni²⁺ ions. To enhance the feasibility of using the biomass in column mode, as well as its reuse for multiple cycles, C. glutamicum was immobilized in a polysulfone matrix. Both the free and immobilized biomasses performed relatively well, with maximum experimental uptakes of 111.4 and 102.4 mg g⁻¹, respectively. An up-flow packed column loaded with immobilized biomass was employed for the removal of Ni²⁺ ions. The column performed well in the biosorption of nickel(II), and exhibited a delayed and favorable breakthrough curve, with Ni²⁺ uptake and percentage removal of 48.1 mg g⁻¹ biomass and 60.4%, respectively.     

Effect of nickel,copper, and zinc on emulsifier production and saturation of cellular fatty acids in the filamentous fungus Curvularia lunata

In the first step of this investigation the toxicity of Ni²⁺, Cu²⁺, and Zn²⁺ ions to the emulsifier producing strain of Curvularia lunata was assessed. Among all the heavy metals studied, Ni²⁺ ions were found to be the most toxic to C. lunata, whereas Zn²⁺ ions exhibited the lowest toxicity. Moreover, only Ni²⁺, when used at sublethal concentration (5 mM) caused lysis of some hyphal tip cells after a short-term exposure (5 h). In the next step, emulsifier production, accumulation of heavy metals by mycelia and emulsifier as well as saturation of cellular fatty acids were examined in 48-h-old cultures where fungal growth intensity was not inhibited by heavy metals (in the presence of Ni²⁺, Cu²⁺, and Zn²⁺ ions at the initial concentration of 1, 5, and 15 mM, respectively) and in cultures where approximately 50% biomass inhibition occurred (in the presence of Ni²⁺, Cu²⁺, and Zn²⁺ ions at the initial concentrations of 3, 10, and 17.5 mM, respectively). Among all the heavy metals studied only Ni²⁺ ions did not induce emulsifier production. As compared with the control, only biomass treated with Ni²⁺ ions displayed an increase in total lipid saturation. This effect resulted mainly from the decrease in linoleic acid (18:2) content correlated with the increase in the amount of stearic acid (18:0). The possible mechanisms by which Ni²⁺ ions could alter the fatty acid profile of C. lunata and the protective role of the emulsifier were also discussed.     

Nickel binding properties of Helicobacter pylori UreF,an accessory protein in the nickel-based activation of urease

Helicobacter pylori UreF (HpUreF) is involved in the insertion of Ni²⁺ in the urease active site. The recombinant protein in solution is a dimer characterized by an extensive α-helical structure and a well-folded tertiary structure. HpUreF binds two Ni²⁺ ions per dimer, with a micromolar dissociation constant, as shown by calorimetry. X-ray absorption spectroscopy indicated that the Ni²⁺ ions reside in a five-coordinate pyramidal geometry comprising exclusively N/O-donor ligands derived from the protein, including one or two histidine imidazole and carboxylate ligands. Binding of Ni²⁺ does not affect the solution properties of the protein. Mutation to alanine of His229 and/or Cys231, a pair of residues located on the protein surface that interact with H. pylori UreD, altered the affinity of the protein for Ni²⁺. This result, complemented by the findings from X-ray absorption spectroscopy, indicates that the Ni²⁺ binding site involves His229, and that Cys231 has an indirect structural role in metal binding. An in vivo assay of urease activation demonstrated that H229A HpUreF, C231A HpUreF, and H229/C231 HpUreF are significantly less competent in this process, suggesting a role for a Ni²⁺ complex with UreF in urease maturation. This hypothesis was supported by calculations revealing the presence of a tunnel that joins the Cys-Pro-His metal binding site on UreG and an opening on the UreD surface, passing through UreF close to His229 and Cys231, in the structure of the H. pylori UreDFG complex. This tunnel could be used to transfer nickel into the urease active site during apoenzyme-to-holoenzyme activation.     

A spin-label assay for metal ion chelation and complex formation.

The electron spin resonance (ESR) lines of nitroxide spin labels are broadened by electron spin exchange reactions that take place during collisions with paramagnetic ions. The degree of line broadening is greatly reduced when the paramagnetic ion forms a coordination bond with certain functional groups on organic molecules. These observations form the basis for a spin-label assay for metal ion chelation and complex formation. This paper describes the characteristics of such an assay for divalent nickel ions and the spin label TEMPONE (2,2,6,6-tetramethylpiperidone-N-oxyl). The chelation of Ni²⁺ by cysteine and the interaction of Ni²⁺ with sodium dodecyl sulfate micelles and phospholipid vesicles are demonstrated. In addition to monitoring interactions of paramagnetic ions, the assay also allows the detection of interactions of nonparamagnetic ions that compete with the paramagnetic ions for binding sites. A kinetic analysis of competition between Ni²⁺ and Zn²⁺ ions for binding sites on phospholipid vesicles is presented. There are several advantages of the spin-label line-broadening assay compared to other conventional assays for metal chelation and complex formation. The line-broadening assay does not require that the sample be optically clear or chemically defined, it requires only very small quantities of material, it can detect as little as 0.4 to 1 μmol of complexing agent, and it may be utilized in complex biological systems including subcellular organelles and macromolecules.     

Nickel is a specific antagonist for the catabolism of activated α2-macroglobulin

The multifunctional low density lipoprotein receptor-related protein/α₂-macroglobulin receptor (LRP) binds and degrades several ligands involved in protease and lipoprotein metabolism. We previously reported that nickel (Ni²⁺) specifically inhibits the binding of activated α₂-macroglobulin (α₂M^*) at 4°C to LRP and had no effect on the binding of other ligands to the receptor (Hussain et al. (1995) Biochem. 34, 16074–16081). In the current investigation, we have examined the effect of Ni²⁺ on the catabolism of ¹²⁵I-labeled α₂M^*, receptor-associated protein (RAP) and lactoferrin at physiologic temperatures by fibroblasts. Nickel completely inhibited the degradation of α₂M^* over a wide range of concentrations (0.3–2.4 nM); 50% inhibition for the degradation of 1.2 nM α₂M^* was observed at 0.5 mM Ni²⁺. Furthermore, nickel inhibited the binding, internalization and degradation of ¹²⁵I-α₂M^* in a dose- and time- dependent manner. In contrast, the degradation of several concentrations of ¹²⁵I-RAP by fibroblasts was not affected by different amounts of Ni²⁺ for various times. Similarly, Ni²⁺ did not inhibit the degradation of lactoferrin either before or after treating the cells with heparitinase to remove cell-surface proteoglycans. The degradation of lactoferrin was, however, inhibited by the RAP indicating that lactoferrin degradation was mediated by the LRP. These data suggest that Ni²⁺ is a specific inhibitor for the degradation of α₂M^*.     

The Effects of Manganese (II) But Not Nickel (II) Ions on Enterococcus hirae Cell Growth, Redox Potential Decrease, and Proton-Coupled Membrane Transport

Enterococcus hirae grow well under anaerobic conditions by fermenting glucose, accompanied with the decrease of oxidation–reduction potential (E _h) from positive values to negative ones. It was shown that heavy metals—copper and iron ions—affect E. hirae growth and alter E _h and proton-potassium ions fluxes through the cell membrane. The aim of this study was to establish the effects of manganese (II) ions on bacterial growth within the concentration range of 0.01–1 mM and compare with nickel (II) ions’ effect. The presence of Mn²⁺ during E. hirae ATCC9790 growth had significant effects: The lag phase duration decreased while the specific growth rate was increased; decrease in E _h was shifted. In contrast, no visible changes in bacterial growth and E _h were observed in the case of Ni²⁺. The effects of these ions on proton-potassium ions fluxes through the cell membrane were estimated in the presence and absence of N,N′-dicyclohexylcarbodiimide (DCCD), inhibitor of the F_oF₁ ATPase. Stronger effect of Mn²⁺ on H⁺–K⁺ exchange was detected in the presence of DCCD that can be explained by a possible complex formation between these substances and its direct influence on membrane transport proteins.     

The regulation of ionic nickel uptake and cytotoxicity by specific amino acids and serum components

The effects of serum components and amino acids on the uptake and cytotoxicity of NiCl₂ were examined in cultured Chinese hamster ovary (CHO) cells. CHO cells maintained in a minimal salts/glucose medium accumulated 10-fold more⁶³Ni than did cells maintained in complete medium supplemented with 10% fetal bovine serum. Cell-surface binding of⁶³Ni appeared to account for the majority of this increased accumulation of cell-associated nickel observed in the simple maintenance medium since such increases were reduced 70% by trypsin treatment. The addition of the Ni²⁺-binding amino acids cysteine or histidine to the salts/glucose medium markedly decreased⁶³Ni accumulations, an effect not observed following addition of any of several amino acids that do not bind Ni²⁺. Supplementation of the salts/glucose medium with fetal bovine serum decreased in a concentration dependent fashion both the⁶³Ni²⁺ uptake and cell detachment caused by Ni²⁺, while dialyzed (amino acid-free) serum was 3–5-fold less effective than undialyzed serum at reducing⁶³Ni²⁺ uptake and similarly exhibited only a slight protective effect against nickel-induced cytotoxicity. Supplementation of dialyzed serum with cysteine at levels approximating those in whole serum partially restored its inhibitory activity toward nickel uptake by cells and restored completely its inhibition of nickel's cytotoxicity, indicating the predominant role of specific amino acids over serum proteins in regulating the uptake and subsequent cytotoxicity of Ni²⁺. Addition of cysteine to the salts/glucose medium during a 2 h exposure of cells to either 100 μM HgCl₂ or 1 mM NiCl₂ masked the cytotoxic effects of these metal ions. These results demonstrate the importance of extracellular small molecular weight metal ion chelators in altering the biological effects of metal ions at the level of metal uptake.     

Influence of metal ions on bioremediation activity of protocatechuate 3,4-dioxygenase from Stenotrophomonas maltophilia KB2

The aim of this paper was to describe the effect of various metal ions on the activity of protocatechuate 3,4-dioxygenase from Stenotrophomonas maltophilia KB2. We also compared activity of different dioxygenases isolated from this strain, in the presence of metal ions, after induction by various aromatic compounds. S. maltophilia KB2 degraded 13 mM 3,4-dihydroxybenzoate, 10 mM benzoic acid and 12 mM phenol within 24 h of incubation. In the presence of dihydroxybenzoate and benzoate, the activity of protocatechuate 3,4-dioxygenase and catechol 1,2-dioxygenase was observed. Although Fe³⁺, Cu²⁺, Zn²⁺, Co²⁺, Al³⁺, Cd²⁺, Ni²⁺ and Mn²⁺ ions caused 20–80 % inhibition of protocatechuate 3,4-dioxygenase activity, the above-mentioned metal ions (with the exception of Ni²⁺) inhibited catechol 1,2-dioxygenase to a lesser extent or even activate the enzyme. Retaining activity of at least one of three dioxygenases from strain KB2 in the presence of metal ions makes it an ideal bacterium for bioremediation of contaminated areas.     

Cytokinin-like growth regulators mitigate toxic action of zinc and nickel ions on maize seedlings

Maize (Zea mays L.) seedlings grown in water culture in the presence of zinc and nickel ions were used with an effort to alleviate heavy metal toxicity by treating seeds with thidiazuron and kinetin (synthetic growth regulators with cytokinin-like activity). Heavy metals were shown to decrease germinability of seeds, suppress seedling growth, alter membrane permeability, and inhibit the activity of ascorbate peroxidase. Synthetic cytokinin-like agents alleviated deteriorative effects of heavy metals; the extent of alleviation depended on toxicant species and its concentration. The toxic effect of Zn²⁺ was effectively relieved by kinetin, whereas the Ni²⁺ toxicity was preferentially alleviated by thidiazuron.     

Inducible nickel resistance in a river isolate of India phylogenetically ascertained as a novel strain of Acinetobacter junii

Summary A gram negative, motile, short rod-shaped, and nickel resistant (tolerating 6.5 mM Ni²⁺) bacterium, strain BB1A, was isolated from the waters of the River Torsa in Hashimara, Jalpaiguri district, West Bengal, India. The isolate BB1A was identified as a strain of Acinetobacter junii following detailed analysis of morphological, physio-biochemical and 16S rRNA gene sequence. The expression of nickel resistance in BB1A was inducible by exposure to nickel chloride at a concentration as low as 50 μM Ni²⁺. The other metal ions, Cu²⁺, Zn²⁺, or Pb²⁺ at a concentration range of 20–30 μM, also induced the nickel resistance system in this bacterium. Southern hybridizations of BB1A genomic DNA with digoxigenin-dUTP labeled DNA probes specific for well known nickel resistance determinants, cnr, ncc or nre, resulted in no detectable signal, but nir specific probe yielded weak hybridization signal with restricted genomic DNA of BB1A. The isolate BB1A, therefore, carries out a novel induction phenomenon of nickel resistance and presumably with a nickel resistance genetic system different from that previously characterized in other bacteria.     

Heterologous Expression and Metal-Binding Characterization of a Type 1 Metallothionein Isoform (OsMTI-1b) from Rice (Oryza sativa)

Metallothioneins (MTs) are ubiquitous, low molecular mass and cysteine-rich proteins that play important roles in maintaining intracellular metal homeostasis, eliminating metal toxification and protecting the cells against oxidative damages. MTs are able to bind metal ions through the thiol groups of their cysteine residues. Plants have several MT isoforms which are classified into four types based on the arrangement of cysteine residues. In the present study, a rice (Oryza sativa) gene encoding type 1 MT isoform, OsMTI-1b, was inserted in vector pET41a and overexpressed in Escherichia coli as carboxy-terminal extensions of glutathione-S-transferase (GST). The recombinant protein GST-OsMTI-1b was purified using affinity chromatography and its ability to bind with Ni²⁺, Cd²⁺, Zn²⁺ and Cu²⁺ ions was analyzed. The results demonstrated that this isoform has ability to bind Ni²⁺, Cd²⁺ and Zn²⁺ ions in vitro, whereas it has no substantial ability to bind Cu²⁺ ions. From competitive reaction with 5,5′-dithiobis(2-nitrobenzoic acid), DTNB, the affinity of metal ions for recombinant form of GST-OsMTI-1b was as follows: Ni²⁺/Cd²⁺ > Zn²⁺ > Cu²⁺     

Studies on copper toxicity in nickel-resistant strains ofNeurospora crassa

Copper toxicity has been studied in three nickel-resistant strains ofNeurospora crassa (Ni^R1, Ni^R2, and Ni^R3). Ni^R1 and Ni^R2, but not Ni^R3, were two-to threefold more sensitive than the parent wild strain (N. crassa EM 5297a) to Cu²⁺ on a normal N medium. On a nitrate N medium, Cu²⁺ was 16-fold more toxic to Ni^R3 because of reduced synthesis of nitrite reductase; Ni^R1 and Ni^R2 were only fivefold more sensitive to Cu²⁺, and nitrite reductase synthesis was unaffected. Mn²⁺ reversed Cu²⁺ toxicity on normal N medium only, in all strains. Fe³⁺ counteracted Cu²⁺ toxicity on nitrate N medium also. It was shown that Cu²⁺ affected Fe³⁺ utilization for nitrite reductase synthesis in Ni^R3 only and that in these Ni²⁺-resistant strains, Fe³⁺ antagonized effects of Cu²⁺, but not of other toxic metal ions.     

Activation of Leishmania (Leishmania) amazonensis arginase at low temperature by binuclear Mn center formation of the immobilized enzyme on a Ni resin

In Leishmania, arginase is responsible for the production of ornithine, a precursor of polyamines required for proliferation of the parasite. In this work, the activation kinetics of immobilized arginase enzyme from L. (L.) amazonensis were studied by varying the concentration of Mn²⁺ applied to the nickel column at 23 °C. The intensity of the binding of the enzyme to the Ni²⁺ resin was directly proportional to the concentration of Mn²⁺. Conformational changes of the enzyme may occur when the enzyme interacts with immobilized Ni²⁺, allowing the following to occur: (1) entrance of Mn²⁺ and formation of the metal bridge; (2) stabilization and activation of the enzyme at 23 °C; and (3) an increase in the affinity of the enzyme to Ni²⁺ after the Mn²⁺ activation step. The conformational alterations can be summarized as follows: the interaction with the Ni²⁺ simulates thermal heating in the artificial activation by opening a channel for Mn²⁺ to enter.     

Planar substrate-binding site dictates the specificity of ECF-type nickel/cobalt transporters

The energy-coupling factor (ECF) transporters are multi-subunit protein complexes that mediate uptake of transition-metal ions and vitamins in about 50% of the prokaryotes, including bacteria and archaea. Biological and structural studies have been focused on ECF transporters for vitamins, but the molecular mechanism by which ECF systems transport metal ions from the environment remains unknown. Here we report the first crystal structure of a NikM, TtNikM2, the substrate-binding component (S component) of an ECF-type nickel transporter from Thermoanaerobacter tengcongensis. In contrast to the structures of the vitamin-specific S proteins with six transmembrane segments (TSs), TtNikM2 possesses an additional TS at its N-terminal region, resulting in an extracellular N-terminus. The highly conserved N-terminal loop inserts into the center of TtNikM2 and occludes a region corresponding to the substrate-binding sites of the vitamin-specific S components. Nickel binds to NikM via its coordination to four nitrogen atoms, which are derived from Met1, His2 and His67 residues. These nitrogen atoms form an approximately square-planar geometry, similar to that of the metal ion-binding sites in the amino-terminal Cu²⁺- and Ni²⁺-binding (ATCUN) motif. Replacements of residues in NikM contributing to nickel coordination compromised the Ni-transport activity. Furthermore, systematic quantum chemical investigation indicated that this geometry enables NikM to also selectively recognize Co²⁺. Indeed, the structure of TtNikM2 containing a bound Co²⁺ ion has almost no conformational change compared to the structure that contains a nickel ion. Together, our data reveal an evolutionarily conserved mechanism underlying the metal selectivity of EcfS proteins, and provide insights into the ion-translocation process mediated by ECF transporters.     

Competitive binding of Fe<Superscript>3+</Superscript>, Cr<Superscript>3+</Superscript>, and Ni<Superscript>2+</Superscript> to transferrin

Competitive binding of Fe³⁺, Cr³⁺, and Ni²⁺ to transferrin (Tf) was investigated at various physiological iron to Tf concentration ratios. Loading percentages for these metal ions are based on a two M ⁿ⁺ to one Tf (i.e., 100% loading) stoichiometry and were determined using a particle beam/hollow cathode–optical emission spectroscopy (PB/HC-OES) method. Serum iron concentrations typically found in normal, iron-deficient, iron-deficient from chronic disease, iron-deficient from inflammation, and iron-overload conditions were used to determine the effects of iron concentration on iron loading into Tf. The PB/HC-OES method allows the monitoring of metal ions in competition with Fe³⁺ for Tf binding. Iron-overload concentrations impeded the ability of chromium (15.0 μM) or nickel (10.3 μM) to load completely into Tf. Low Fe³⁺ uptake by Tf under iron-deficient or chronic disease iron concentrations limited Ni²⁺ loading into Tf. Competitive binding kinetic studies were performed with Fe³⁺, Cr³⁺, and Ni²⁺ to determine percentages of metal ion uptake into Tf as a function of time. The initial rates of Fe³⁺ loading increased in the presence of nickel or chromium, with maximal Fe³⁺ loading into Tf in all cases reaching approximately 24%. Addition of Cr³⁺ to 50% preloaded Fe³⁺–Tf showed that excess chromium (15.0 μM) displaced roughly 13% of Fe³⁺ from Tf, resulting in 7.6 ± 1.3% Cr³⁺ loading of Tf. The PB/HC-OES method provides the ability to monitor multiple metal ions competing for Tf binding and will help to understand metal competition for Tf binding.     

Response of the carotenoidless mutant Rhodobacter sphaeroides growing cells to cobalt and nickel exposure

The interaction of cobalt (Co²⁺) and nickel (Ni²⁺) ions with whole cells of the photosynthetic purple bacterium Rhodobacter sphaeroides strain R26 was investigated. Active and passive uptakes were examined in cells grown in the presence of increasing amounts of Co²⁺ and Ni²⁺. Inductively coupled plasma atomic emission spectroscopy (ICP-AES), pH titration, and attenuated total reflection Fourier transform infrared (ATR-FTIR) spectroscopy were used to assess the role of cell envelope and metabolism in accumulating the two heavy metals. The chosen microorganism was able to uptake cobalt and nickel up to 2.2 and 0.25 mg per gram of dried cells respectively, with the largest part found bound to the cell surface. Carboxylate groups lying on the cell wall of this Gram-negative bacterium proved to be the major candidates for binding protons and metal cations. Co²⁺ was found to interfere with Mg²⁺ extracellular immobilization and transport across the membrane, indicating that these ions share binding sites on the cell envelope and ion transport systems. According to the presence of a competition mechanism, bacterial growth experiments showed that high Mg²⁺ concentrations are able to rescue R. sphaeroides from Co²⁺ toxicity.     

Inhibition of Urease from Seeds of Water-melon (Citrullus vulgaris) by Heavy Metal Ions

Urease from the seeds of water melon was found to be inhibited by heavy metal ions like copper, lead, nickel and cobalt. The order of effectiveness of these metals as inhibitors was Cu²⁺ > Pb²⁺ > Ni²⁺ > Co²⁺. The inhibition by these ions was noncompetitive. Time — dependent interaction of urease with nickel and cobalt exhibited a biphasic inhibition behaviour in which approximately half of the initial activity was lost rapidly (within 2 min) and remainder in a slow phase. The inhibition was largely irreversible, hence could not be reversed by dialysis. These observations are suggestive of half-and-half distribution of — SH groups on the native enzyme resulting urease into asymmetric oligomeric molecule.