Biotic degradation at night,abiotic degradation at day: positive feedbacks on litter decomposition in drylands

The arid and semi‐arid drylands of the world are increasingly recognized for their role in the terrestrial net carbon dioxide (CO₂) uptake, which depends largely on plant litter decomposition and the subsequent release of CO₂ back to the atmosphere. Observed decomposition rates in drylands are higher than predictions by biogeochemical models, which are traditionally based on microbial (biotic) degradation enabled by precipitation as the main mechanism of litter decomposition. Consequently, recent research in drylands has focused on abiotic mechanisms, mainly photochemical and thermal degradation, but they only partly explain litter decomposition under dry conditions, suggesting the operation of an additional mechanism. Here we show that in the absence of precipitation, absorption of dew and water vapor by litter in the field enables microbial degradation at night. By experimentally manipulating solar irradiance and nighttime air humidity, we estimated that most of the litter CO₂ efflux and decay occurring in the dry season was due to nighttime microbial degradation, with considerable additional contributions from photochemical and thermal degradation during the daytime. In a complementary study, at three sites across the Mediterranean Basin, litter CO₂ efflux was largely explained by litter moisture driving microbial degradation and ultraviolet radiation driving photodegradation. We further observed mutual enhancement of microbial activity and photodegradation at a daily scale. Identifying the interplay of decay mechanisms enhances our understanding of carbon turnover in drylands, which should improve the predictions of the long‐term trend of global carbon sequestration.     

Lignin decomposition along an Alpine elevation gradient in relation to physicochemical and soil microbial parameters

Lignin is an aromatic plant compound that decomposes more slowly than other organic matter compounds; however, it was recently shown that lignin could decompose as fast as litter bulk carbon in minerals soils. In alpine Histosols, where organic matter dynamics is largely unaffected by mineral constituents, lignin may be an important part of soil organic matter (SOM). These soils are expected to experience alterations in temperature and/or physicochemical parameters as a result of global climate change. The effect of these changes on lignin dynamics remains to be examined and the importance of lignin as SOM compound in these soils evaluated. Here, we investigated the decomposition of individual lignin phenols of maize litter incubated for 2 years in‐situ in Histosols on an Alpine elevation gradient (900, 1300, and 1900 m above sea level); to this end, we used the cupric oxide oxidation method and determined the phenols’ ¹³C signature. Maize lignin decomposed faster than bulk maize carbon in the first year (86 vs. 78% decomposed); however, after the second year, lignin and bulk C decomposition did not differ significantly. Lignin mass loss did not correlate with soil temperature after the first year, and even correlated negatively at the end of the second year. Lignin mass loss also correlated negatively with the remaining maize N at the end of the second year, and we interpreted this result as a possible negative influence of nitrogen on lignin degradation, although other factors (notably the depletion of easily degradable carbon sources) may also have played a role at this stage of decomposition. Microbial community composition did not correlate with lignin mass loss, but it did so with the lignin degradation indicators (Ac/Al)s and S/V after 2 years of decomposition. Progressing substrate decomposition toward the final stages thus appears to be linked with microbial community differentiation.     

凋落物多样性及组成对凋落物分解及土壤微生物群落的影响——二氧化碳倍增条件下

受全球变化的影响生物多样性的丧失日益严重,及时了解凋落物物种多样性及其组成如何直接或者通过调节微生物群落来间接影响凋落物分解已经成为生态学领域的热点问题之一。在呼伦贝尔典型草原区,羊草（Leymus chinensis）为原生群落建群种,茵陈蒿（Artemisia capillaris）、麻花头（Serratula centauroides）、二裂委陵菜（Potentilla bifurca）在退化及恢复群落中的多度均较大,本研究以此4种植物的凋落物为研究对象,在两倍于当前大气CO₂浓度（800 μmol/mol）条件下,通过嵌套实验设计来研究凋落物多样性（凋落物组成）对凋落物质量、C、N残余率和残余C/N的影响,并深入分析凋落物初始性质以及土壤革兰氏阳性菌（G⁺）、革兰氏阴性菌（G^-）、细菌（B）、真菌（F）及土壤总微生物磷脂脂肪酸（Phospholipid Fatty Acid,PLFA）含量和F/B对凋落物分解的影响。结果表明：（1）凋落物多样性及组成对凋落物质量、C、N残余率以及残余C/N均具有显著影响;凋落物组成对G⁺ PLFAs含量具有显著影响;（2）冗余分析（Redundancy Analysis,RDA）结果表明凋落物组成对凋落物分解和土壤微生物群落相关指标的影响高于凋落物多样性;（3）结构方程模型（Structural Equation Model,SEM）结果表明凋落物初始木质素含量和初始C/N均对凋落物分解具有显著影响,其中凋落物初始木质素含量起主导作用,其还可通过对土壤真菌PLFAs含量的影响来间接影响凋落物N残余率和残余C/N。所得结果可为大气CO₂浓度升高条件下退化草原生态系统的物质循环特征的预测乃至草原生态系统功能的合理评估提供数据支持。     

Paradoxical effects of temperature and solar irradiance on the photodegradation state of killed phytoplankton

The aim of this paper was to study the effects of temperature and irradiance on the photodegradation state of killed phytoplankton cells. For this purpose, killed cells of the diatom Chaetoceros neogracilis RCC2022 were irradiated (photosynthetically active radiation) at 36 and 446 J · s^?1 · m^?2 (for the same cumulative dose of irradiation energy) and at two temperatures (7°C and 17°C). Analyses of specific lipid tracers (fatty acids and sterols) revealed that low temperatures and irradiances increased photooxidative damages of monounsaturated lipids (i.e., palmitoleic acid, cholesterol and campesterol). The high efficiency of type II photosensitized degradation processes was attributed to: (i) the relative preservation of the sensitizer (chlorophyll) at low irradiances allowing a longer production of singlet oxygen and (ii) the slow diffusion rate of singlet oxygen through membranes at low temperatures inducing more damages. Conversely, high temperatures and irradiances induced (i) a rapid degradation of the photosensitizer and a loss of singlet oxygen by diffusion outside the membranes (limiting type II photosensitized oxidation), and (ii) intense autoxidation processes degrading unsaturated cell lipids and oxidation products used as photodegradation tracers. Our results may explain the paradoxical relationship observed in situ between latitude and photodegradation state of phytoplankton cells.     

High nitrogen deposition alters the decomposition of bog plant litter and reduces carbon accumulation

Bogs are globally important sinks of atmospheric carbon (C) due to the accumulation of partially decomposed litter that forms peat. Because bogs receive their nutrients from the atmosphere, the world‐wide increase of nitrogen (N) deposition is expected to affect litter decomposition and, ultimately, the rate of C accumulation. However, the mechanism of such biogeochemical alteration remains unclear and quantification of the effect of N addition on litter accumulation has yet to be done. Here, we show that 7 years of N addition to a bog decreased the C : N ratio, increased the bacterial biomass and stimulated the activity of hydrolytic and oxidative enzymes in surface peat. Furthermore, N addition modified nutrient limitation of microbes during litter decomposition so that phosphorus became a primary limiting nutrient. Alteration of N release from decomposing litter affected bog water chemistry and the competitive balance between peat‐forming mosses and vascular plants. We estimate that deposition of about 4 g N m^?2 yr^?1 will cause a mean annual reduction of fresh litter C accumulation of about 40 g m^?2 primarily as a consequence of decreased litter production from peat‐forming mosses. Our findings show that N deposition interacts with both above and below ground components of biodiversity to threaten the ability of bogs to act as N‐sinks, which may offset the positive effects of N on C accumulation seen in other ecosystems.     

马尾松人工林林窗内凋落叶微生物生物量碳和氮的动态变化

目前,人工林普遍存在土壤退化、生物多样性降低等生态问题.人工抚育间伐,营造混交林是人们经营和管理人工林的主要方式之一.为了了解这种经营方式对人工林生态系统中养分循环的影响,本文研究了位于长江上游低山丘陵区的42年生马尾松人工林7种林窗(G₁: 100 m²、G₂: 225 m²、G₃: 400 m²、G₄: 625 m²、G₅: 900 m²、G₆: 1225 m²、G₇: 1600 m²)中马尾松和红椿凋落叶分解过程中微生物生物量碳和氮的动态变化.结果表明: 中小型林窗(G₁～G₅)有利于凋落叶分解过程中微生物生物量碳(MBC)和生物量氮(MBN)的增加.马尾松凋落叶中的MBC和MBN以及红椿凋落叶中的MBN,在分解期(360 d)内呈现出先增加后降低的变化,在180 d时三者达到最大值,其最高含量分别达到9.87、0.22和0.80 g·kg^-1.而红椿凋落叶中的MBC在分解90 d时即达到最大值44.40 g·kg^-1.红椿凋落叶中的MBC和MBN显著高于马尾松凋落叶.凋落叶中的微生物生物量碳和氮与日均温和凋落物的含水率显著相关,与凋落物的特性也密切相关.这说明对人工林进行抚育间伐时可将林窗控制在100～900 m²的范围内,有利于凋落叶分解过程中微生物生物量碳和氮的增加,加快凋落叶的分解,提高人工林林地的土壤肥力.     

Atmospheric water vapor as driver of litter decomposition in Mediterranean shrubland and grassland during rainless seasons

Litter production in many drought‐affected ecosystems coincides with the beginning of an extended season of no or limited rainfall. Because of lack of moisture litter decomposition during such periods has been largely ignored so far, despite potential importance for the overall decay process in such ecosystems. To determine drivers and extent of litter decay in rainless periods, a litterbag study was conducted in Mediterranean shrublands, dwarf shrublands and grasslands. Heterogeneous local and common straw litter was left to decompose in open and shaded patches of various field sites in two study regions. Fresh local litter lost 4–18% of its initial mass over about 4 months without rainfall, which amounted to 15–50% of total annual decomposition. Lab incubations and changes in chemical composition suggested that litter was degraded by microbial activity, enabled by absorption of water vapor from the atmosphere. High mean relative humidity of 85% was measured during 8–9 h of most nights, but the possibility of fog deposition or dew formation at the soil surface was excluded. Over 95% of the variation in mass loss and changes in litter nitrogen were explained by characteristics of water‐vapor uptake by litter. Photodegradation induced by the intense solar radiation was an additional mechanism of litter decomposition as indicated by lignin dynamics. Lignin loss from litter increased with exposure to ultraviolet radiation and with initial lignin concentration, together explaining 90%–97% of the variation in lignin mass change. Our results indicate that water vapor, solar radiation and litter quality controlled decomposition and changes in litter chemistry during rainless seasons. Many regions worldwide experience transient periods without rainfall, and more land area is expected to undergo reductions in rainfall as a consequence of climate change. Therefore, absorption of water vapor might play a role in decomposition and nutrient cycling in an increasing number of ecosystems.     

不同地下水位灰化薹草分解过程中木质素降解与碳、氮、磷释放的关系

为研究湿地植物分解过程中木质素分解与碳、氮、磷元素释放之间的关系及其对不同地下水位环境梯度的响应,在鄱阳湖典型碟形湖泊-白沙湖设置了200 m×300 m分解试验样地,沿地下水位梯度划分4个试验样带(从湖岸到湖心依次为GT-A, GT-B, GT-C, GT-D),采用分解袋法模拟了典型湿地植物灰化薹草在不同地下水位环境的分解过程。结果表明,分解15 d后,地下水位的升高促进了木质素的分解和碳、氮、磷元素的释放;在分解第60—90天,碳、氮、磷元素的相对归还指数随着木质素分解速率的升高而显著增大,并且相关性程度随着分解时间先增强,后减弱;分解过程中土壤pH、含水量和微生物量碳、氮对木质素的分解和碳、氮、磷元素的归还具有显著的促进作用。研究结果将有助于深化对湿地植物分解和生物地球化学循环过程的认识,为湿地自然保护区的科学有效管理提供理论依据。     

Effects of ultraviolet radiation on litter decomposition depend on precipitation and litter chemistry in a shortgrass steppe ecosystem

We examined the effect of altered levels of ultraviolet (UV) radiation (280–400 nm) and different amounts of precipitation on the decomposition rates of litter of contrasting carbon to nitrogen ratio (C : N) in a 3-year field experiment in a shortgrass steppe (SGS) ecosystem. UV radiation was either blocked or passed under clear plastic tents where precipitation was applied to simulate a very dry or very wet year. These treatments minimized or maximized the abiotic component (UV) or the biotic component (biological activity of decomposer organisms) of decomposition to assess potential interactions between the two. Initial litter chemistry varied in response to having been grown under ambient or elevated atmospheric CO₂ concentrations. While precipitation and litter chemistry were the most important drivers in decomposition in this system, UV radiation increased decomposition rates under dry conditions in litter with higher C : N ratios. Exposure to UV radiation slightly increased the amount of holocellulose that was lost from the litter. UV exposure did not affect the decomposition of the lignin fraction. Increased decomposition with UV radiation was accompanied by a decrease in N immobilization over the summer months. These results suggest that the effects of UV radiation on decomposition rates may be primarily abiotic, caused by direct photochemical degradation of the litter. Our results demonstrate that the role of UV radiation in litter decomposition in semiarid systems depends on the aridity of the system and the chemistry of the litter.     

Climate and litter quality differently modulate the effects of soil fauna on litter decomposition across biomes

Climate and litter quality have been identified as major drivers of litter decomposition at large spatial scales. However, the role played by soil fauna remains largely unknown, despite its importance for litter fragmentation and microbial activity. We synthesised litterbag studies to quantify the effect sizes of soil fauna on litter decomposition rates at the global and biome scales, and to assess how climate, litter quality and soil fauna interact to determine such rates. Soil fauna consistently enhanced litter decomposition at both global and biome scales (average increment ~ 27%). However, climate and litter quality differently modulated the effects of soil fauna on decomposition rates between biomes, from climate‐driven biomes to those where climate effects were mediated by changes in litter quality. Our results advocate for the inclusion of biome‐specific soil fauna effects on litter decomposition as a mean to reduce the unexplained variation in large‐scale decomposition models.     

Strong specificity in the interaction between parasitoids and symbiont‐protected hosts

Coevolution between hosts and parasites may promote the maintenance of genetic variation in both antagonists by negative frequency‐dependence if the host–parasite interaction is genotype‐specific. Here we tested for specificity in the interaction between parasitoids (Lysiphlebus fabarum) and aphid hosts (Aphis fabae) that are protected by a heritable defensive endosymbiont, the γ‐proteobacterium Hamiltonella defensa. Previous studies reported a lack of genotype specificity between unprotected aphids and parasitoids, but suggested that symbiont‐conferred resistance might exhibit a higher degree of specificity. Indeed, in addition to ample variation in host resistance as well as parasitoid infectivity, we found a strong aphid clone‐by‐parasitoid line interaction on the rates of successful parasitism. This genotype specificity appears to be mediated by H. defensa, highlighting the important role that endosymbionts can play in host–parasite coevolution.     

Mismatch in microbial food webs: predators but not prey perform better in their local biotic and abiotic conditions

Understanding how trophic levels respond to changes in abiotic and biotic conditions is key for predicting how food webs will react to environmental perturbations. Different trophic levels may respond disproportionately to change, with lower levels more likely to react faster, as they typically consist of smaller‐bodied species with higher reproductive rates. This response could cause a mismatch between trophic levels, in which predators and prey will respond differently to changing abiotic or biotic conditions. This mismatch between trophic levels could result in altered top‐down and bottom‐up control and changes in interaction strength. To determine the possibility of a mismatch, we conducted a reciprocal‐transplant experiment involving Sarracenia purpurea food webs consisting of bacterial communities as prey and a subset of six morphologically similar protozoans as predators. We used a factorial design with four temperatures, four bacteria and protozoan biogeographic origins, replicated four times. This design allowed us to determine how predator and prey dynamics were altered by abiotic (temperature) conditions and biotic (predators paired with prey from either their local or non‐local biogeographic origin) conditions. We found that prey reached higher densities in warmer temperature regardless of their temperature of origin. Conversely, predators achieved higher densities in the temperature condition and with the prey from their origin. These results confirm that predators perform better in abiotic and biotic conditions of their origin while their prey do not. This mismatch between trophic levels may be especially significant under climate change, potentially disrupting ecosystem functioning by disproportionately affecting top‐down and bottom‐up control.     

Genotypic trait variation modifies effects of climate warming and nitrogen deposition on litter mass loss and microbial respiration

Intraspecific variation in genotypically determined traits can influence ecosystem processes. Therefore, the impact of climate change on ecosystems may depend, in part, on the distribution of plant genotypes. Here we experimentally assess effects of climate warming and excess nitrogen supply on litter decomposition using 12 genotypes of a cosmopolitan foundation species collected across a 2100 km latitudinal gradient and grown in a common garden. Genotypically determined litter‐chemistry traits varied substantially within and among geographic regions, which strongly affected decomposition and the magnitude of warming effects, as warming accelerated litter mass loss of high‐nutrient, but not low‐nutrient, genotypes. Although increased nitrogen supply alone had no effect on decomposition, it strongly accelerated litter mass loss of all genotypes when combined with warming. Rates of microbial respiration associated with the leaf litter showed nearly identical responses as litter mass loss. These results highlight the importance of interactive effects of environmental factors and suggest that loss or gain of genetic variation associated with key phenotypic traits can buffer, or exacerbate, the impact of global change on ecosystem process rates in the future.     

Associations between invasive eucalyptus psyllids and arthropod litter communities under tree canopies in southern California

Honeydew‐producing psyllids are an important pest of eucalyptus (Myrtaceae) in California, USA, and may influence surrounding litter arthropod communities. In particular, the introduced Australian psyllids Glycaspis brimblecombei Moore and Eucalyptolyma maideni Froggatt (both Hemiptera: Psyllidae) may facilitate the prevalence of invasive ant species. We examined ground‐dwelling arthropod communities under eucalyptus trees infested by psyllids. We used a model comparison approach to examine the association of psyllid infestation, ant abundance, and environmental factors with ground arthropod abundance and richness. We found a significant positive association between ant activity on eucalyptus trees and psyllid abundance. Higher psyllid abundance and higher Argentine ant abundance were associated with increased arthropod richness. Irrigation was also associated with increased arthropod richness and abundance. Regardless of location collected, arthropod communities collected in pitfall traps under trees with high psyllid abundance had high similarity to arthropod communities under trees with high ant activity. Abundance of isopods was positively associated with both ant and psyllid abundance. Other arthropod groups differed in their association with ants and psyllids. Argentine ants may exacerbate pest impacts and may also decrease the effectiveness of biological control programs for eucalyptus lerp psyllids.     

Helicobacter Pylori infection of the gallbladder and the risk of chronic cholecystitis and cholelithiasis: A systematic review and meta‐analysis

Background

Helicobacter pylori is coexisted with various diseases, including chronic gastritis, ulcer, and gastric cancer. Besides, chronic cholecystitis and cholelithiasis are extremely widespread over the world, which are considered as high health‐care cost burdens of digestive diseases. Epidemiologic evidence on Helicobacter pylori infection in gallbladder increasing the risk of biliary diseases has been contradictory.

Aim

Conduct a meta‐analysis of overall studies and investigate an association between Helicobacter pylori infection of the gallbladder with chronic cholecystitis/cholelithiasis.

Methods

We used PubMed, EMBASE, and Cochrane library databases to identify all published studies before August 2017. Pooled odds ratios (OR) and corresponding 95% confidence intervals (CIs) were obtained using the random effects model. Heterogeneity, sensitivity, and stratified analyses were also performed.

Results

Eighteen studies involving 1544 participants and 1061 biliary cases with chronic cholecystitis/cholelithiasis were included. Helicobacter pylori infection of the gallbladder was significantly associated with an increased risk of chronic cholecystitis and cholecystitis (OR = 3.022; 95% CI, 1.897‐4.815; I² = 20.1%). In addition, country‐based subgroup analysis also showed a positive association between Helicobacter pylori positivity and chronic cholecystitis/cholelithiasis risk. The ORs (95% CIs) for Asian and non‐Asian region studies were 3.75 (1.83‐7.71) and 2.25 (1.29‐3.89), respectively.

Conclusion

This meta‐analysis suggests that infection of the gallbladder with Helicobacter pylori is closely related to an increased risk of chronic cholecystitis and cholelithiasis.     

Evolution and characterisation of the AhRAF4 NB‐ARC gene family induced by Aspergillus flavus inoculation and abiotic stresses in peanut

• Aflatoxin contamination in peanut is a serious food safety issue to human health around the world. Finding disease resistance genes is a key strategy for genetic improvement in breeding to deal with this issue.
• We identified an Aspergillus flavus‐induced NBS‐LRR gene, AhRAF4, using a microarray‐based approach. By comparison of 23 sequences from three species using phytogenetics, protein secondary structure and three‐dimensional structural analyses, AhRAF4 was revealed to be derived from Arachis duranensis by recombination, and has newly evolved into a family of several members, characterised by duplications and point mutations. However, the members of the family descended from A. ipaensis were lost following tetraploidisation.
• AhRAF4 was slightly up‐regulated by low temperature, drought, salicylic acid and ethylene, but down‐regulated by methyl jasmonate. The distinct responses upon As. flavus inoculation and the differential reactions between resistant and susceptible varieties indicate that AhRAF4 might play a role in defence responses. Temporal and spatial expression and the phenotype of transformed protoplasts suggest that AhRAF4 may also be associated with pericarp development.
• Because tetraploid cultivated peanuts are vulnerable to many pathogens, an exploration of R‐genes may provide an effective method for genetic improvement of peanut cultivars.