The role of sediment organic matter composition in larval habitat selection by the polychaete Capitella sp. I

The role of sediment organic matter composition in larval habitat selection by the polychaete Capitella sp. I was investigated using a still water multiple-choice experiment. Specifically, the following question was addressed: what are the roles of sediment labile organic compounds in larval habitat selection? A replicated Latin-square design was used to test larval preferences among sediments collected from five sites (TLC—Tung Lung Chau; VHE—Victoria Harbor east; VH—Victoria Harbor; VHW—Victoria Harbor west; PC—Peng Chau) in the vicinity of Victoria Harbor, Hong Kong. Although mean grain size was not different among sites, water content and the total organic matter were higher in VH Mud but were similar among other sites. Carbohydrate, lipid, and biopolymeric fractions followed the same trend. According to protein content, sites were ranked as: VH > VHW > TLC = VHE > PC. PC Mud had the highest carbohydrate/protein ratio, due to low concentration of protein. According to larval preference, sites were ranked as: TLC = VH = VHW = VHE > PC. Our study shows a precise relationship between sediment biochemical properties and larval habitat selection. Larvae tend to choose sediments with low carbohydrate/protein ratio. Results suggest that types of sediment organic matter may play more important role in the larval habitat selection process of Capitella sp. I than concentration of organic matter alone.     

The effect of wrack composition and diversity on macrofaunal assemblages in intertidal marine sediments

Wrack (dead, washed-up seaweed and seagrass) buried in soft substrata may increase the organic content and alter the physical structure of sediments. These effects may influence the composition and structure of macrofaunal assemblages in the sediment. Such influences can be expected to vary according to the type and amount of wrack as well as the presence of invasive seaweeds in the wrack. In this study, we deliberately buried different amounts of the invasive species Sargassum muticum in isolation or mixed to the native species Ulva sp. and Fucus vesiculosus, in two intertidal sandflats to test some hypotheses about the response of macrofaunal assemblages. We tested whether (1) diversity of detritus (i.e. different mixtures), and (2) the amount of detritus of S. muticum influenced the composition and the relative abundance of macrofaunal assemblages. We also assessed whether the sediment organic carbon and the biomass of benthic microalgae varied depending on the diversity of detritus and the amount of detritus of S. muticum. Finally, we tested if these effects of wrack were consistent across sites. Results indicated that buried wrack affected the composition and structure of macrofaunal assemblages in short-term (i.e. 4 weeks), but there were no differences depending on detritus diversity or the amount of S. muticum. In addition, sediment organic matter and microalgal biomass were not affected by the addition of wrack. They instead varied greatly among small spatial scales (i.e. plots). Wrack composition or abundance of the invasive species S. muticum played thus a small role in shaping the structure of macrofaunal assemblages or the biomass of benthic microalgae in these intertidal sediments, probably because these sediments are frequently affected by various inputs of organic matter and benthic assemblages are already adapted to organically enriched sediments.     

Plant-parasitic Nematode Communities and Their Associations with Soil Factors in Organically Farmed Fields in Minnesota

A survey was conducted to determine the assemblage and abundance of plant-parasitic nematodes and their associations with soil factors in organically farmed fields in Minnesota. A total of 31 soil samples were collected from southeast (SE), 26 samples from southwest (SW), 28 from west-central (WC), and 23 from northwest (NW) Minnesota. The assemblage and abundance of plant-parasitic nematodes varied among the four regions. The soybean cyst nematode, Heterodera glycines, the most destructive pathogen of soybean, was detected in 45.2, 88.5, 10.7, and 0% of organically farmed fields with relative prominence (RP) values of 10.3, 26.5, 0.6, and 0 in the SE, SW, WC, and NW regions, respectively. Across the four regions, other common genera of plant-parasitic nematodes were Helicotylenchus (42.6, RP value, same below), Pratylenchus (26.9), Tylenchorhynchus and related genera (9.4), Xiphinema (5.6), and Paratylenchus (5.3). Aphelenchoides, Meloidogyne, Hoplolaimus, Mesocriconema, and Trichodorus were also detected at low frequencies and/or low population densities. The similarity index of plant-parasitic nematodes between two regions ranged from 0.44 to 0.71 and the similarity increased with decreasing distance between regions. The densities of most plant-parasitic nematodes did not correlate with measured soil factors (organic matter, pH, texture). However, the densities of Pratylenchus correlated negatively with % sand, and Xiphinema was correlated negatively with soil pH.     

Benthic fauna bio-irrigation effects on nutrient regeneration in fish farm sediments

Impacts of organic enrichment and a modified benthic fauna community (caused by fish farming) on benthic mineralization rates and nutrient cycling were studied in sediments at one Danish and one Cypriote fish farm. Sediment organic matter concentration and macrofauna community composition were manipulated in microcosms and changes in total benthic metabolism (oxygen consumption, TCO₂ production), anaerobic metabolism (sulfate reduction rates), nutrient fluxes and sediment parameters were followed for a period of 3 weeks. Mineralization rates were found to be highly correlated with irrigation velocities and largest fauna effects were found in the Danish sediments with the large and active irrigating climax species (Nereis diversicolor and Macoma balthica). Eastern Mediterranean climax species (Glycera rouxii and Naineris laevigata) also stimulated mineralization rates but to a smaller extent due to lower irrigation, whereas the opportunistic species (Capitella in Danish sediment and Hermodice carunculata in Cypriote sediment) showed less effect on mineralization. Ammonium and phosphate release increased with increasing irrigation velocities, but much less in Cyprus indicating higher nutrient retention at the ultra-oligotrophic location compared to eutrophic Danish site. Irrigation velocities, and thus mineralization rates, increased by organic matter loading, indicating larger fauna-induced oxidation in enriched environments. The result implies that a change in fauna structure in fish farm sediment towards smaller opportunistic polychaete species with lower irrigation will result in slower mineralization rates and potentially increase accumulation of organic waste products.     

Effects of sediment-bound Cd, Pb, and Ni on the growth, feeding, and survival of Capitella sp. I

Anthropogenic metal pollutants bioaccumulated in benthic animals by means of feeding and osmotic diffusion. These metals may affect the physiology of the benthos. In this study, we exposed Capitella sp. I to three metals (Cd, Pb, and Ni), each in eight different concentrations, to determine the effects of metals on the animals. Growth rate, ingestion rate, and percent survival were estimated in three separated experiments. The growth and feeding of the worms were sensitive to even the lowest concentrations of each metal added to the sediments. The lowest observable adverse effect levels for Cd, Ni, and Pb were 0.03, 1.59, and 0.41 μmol g^− 1 sediment, respectively. Growth rates in the elevated metal contaminant treatments decreased drastically at slightly contaminated levels, lessened detrimental effects at moderately contaminated levels, and showed incompensable intoxication at heavily contaminated levels. The trends in ingestion rates were similar to those of growth rates. No significant difference in survivorship was found among the different contaminant levels for any of the three heavy metals. Capitella sp. I was most sensitive to Cd, followed by Ni and Pb, which had similar effects. The rapid physiological responses of Capitella sp. I allowed the animals to survive metal exposure. Sediment productivity remained unchanged at different contamination levels of Ni and Pb, but was drastically reduced at 4.75 μmol g^− 1 Cd in the sediment. This further demonstrated Capitella sp. I can adjust their ingestion rates to maintain constant sediment productivities in moderate pollution conditions; however, when threshold concentration was exceeded, homeostasis collapsed.     

Degradation of cyanobacterial biomass in anoxic tidal-flat sediments: a microcosm study of metabolic processes and community changes

To follow the anaerobic degradation of organic matter in tidal-flat sediments, a stimulation experiment with ¹³C-labeled Spirulina biomass (130 mg per 21 g sediment slurry) was conducted over a period of 24 days. A combination of microcalorimetry to record process kinetics, chemical analyses of fermentation products and RNA-based stable-isotope probing (SIP) to follow community changes was applied. Different degradation phases could be identified by microcalorimetry: Within 2 days, heat output reached its maximum (55 μW), while primary fermentation products were formed (in μmol) as follows: acetate 440, ethanol 195, butyrate 128, propionate 112, H₂ 127 and smaller amounts of valerate, propanol and butanol. Sulfate was depleted within 7 days. Thereafter, methanogenesis was observed and secondary fermentation proceeded. H₂ and alcohols disappeared completely, whereas fatty acids decreased in concentration. Three main degraders were identified by RNA-based SIP and denaturant gradient gel electrophoresis. After 12 h, two phylotypes clearly enriched in ¹³C: (i) Psychrilyobacter atlanticus, a fermenter known to produce hydrogen and acetate and (ii) bacteria distantly related to Propionigenium. A Cytophaga-related bacterium was highly abundant after day 3. Sulfate reduction appeared to be performed by incompletely oxidizing species, as only sulfate-reducing bacteria related to Desulfovibrio were labeled as long as sulfate was available.     

An insight into the feeding ecology of deep-sea canyon nematodes — Results from field observations and the first in-situC feeding experiment in the Nazaré Canyon

Submarine canyon systems provide a heterogeneous habitat for deep-sea benthos in terms of topography, hydrography, and the quality and quantity of organic matter present. Enhanced meiofauna densities as found in organically enriched canyon sediments suggest that nematodes, as the dominant metazoan meiobenthic taxon, may play an important role in the benthic food web of these sediments. Very little is known about the natural diets and trophic biology of deep-sea nematodes, but enrichment experiments can shed light on nematode feeding selectivity and trophic position. An in-situ pulse-chase experiment (Feedex) was performed in the Nazaré Canyon on the Portuguese margin in summer 2007 to study nematode feeding behaviour. ¹³C-labelled diatoms and bacteria were added to sediment cores which were then sampled over a 14-day period. There was differential uptake by the nematode community of the food sources provided, indicating selective feeding processes. ¹³C isotope results revealed that selective feeding was less pronounced at the surface, compared to the sediment subsurface. This was supported by a higher trophic diversity in surface sediments (Θ⁻¹ = 3.50 ± 0.2) compared to the subsurface (2.78 ± 0.6), implying that more food items may be used by the nematode community at the sediment surface. Predatory and scavenging nematodes contributed relatively more to biomass than other feeding types and can be seen as key contributors to the nematode food web at the canyon site. Non-selective deposit feeding nematodes were the dominant trophic group in terms of abundance and contributed substantially to total nematode biomass. The high levels of ‘fresh’ (bioavailable) organic matter input and moderate hydrodynamic disturbance of the canyon environment lead to a more complex trophic structure in canyon nematode communities than that found on the open continental slope, and favours predator/scavengers and non-selective deposit feeders.     

Responses of the coastal bacterial community to viral infection of the algae Phaeocystis globosa

The release of organic material upon algal cell lyses has a key role in structuring bacterial communities and affects the cycling of biolimiting elements in the marine environment. Here we show that already before cell lysis the leakage or excretion of organic matter by infected yet intact algal cells shaped North Sea bacterial community composition and enhanced bacterial substrate assimilation. Infected algal cultures of Phaeocystis globosa grown in coastal North Sea water contained gamma- and alphaproteobacterial phylotypes that were distinct from those in the non-infected control cultures 5 h after infection. The gammaproteobacterial population at this time mainly consisted of Alteromonas sp. cells that were attached to the infected but still intact host cells. Nano-scale secondary-ion mass spectrometry (nanoSIMS) showed ∼20% transfer of organic matter derived from the infected ¹³C- and ¹⁵N-labelled P. globosa cells to Alteromonas sp. cells. Subsequent, viral lysis of P. globosa resulted in the formation of aggregates that were densely colonised by bacteria. Aggregate dissolution was observed after 2 days, which we attribute to bacteriophage-induced lysis of the attached bacteria. Isotope mass spectrometry analysis showed that 40% of the particulate ¹³C-organic carbon from the infected P. globosa culture was remineralized to dissolved inorganic carbon after 7 days. These findings reveal a novel role of viruses in the leakage or excretion of algal biomass upon infection, which provides an additional ecological niche for specific bacterial populations and potentially redirects carbon availability.     

Influence of submerged macrophytes on sediment composition and near-bed flow in lowland streams

1. Submerged macrophytes have important physical and structural effects on lowland streams. This study investigated the ability of submerged macrophytes to modify the near-bed flow and to retain mineral and organic particles in patches of four common macrophytes in shallow Danish streams during mid-summer. 2. In dense patches of Callitriche cophocarpa and Elodea canadensis, where near-bed velocity was reduced, the sediment surface was markedly raised and enriched with fine particles. In dense patches of Ranunculus peltatus, fine sediments were deposited among rooted shoots in the upstream part of the patches, while erosion and coarse sediments prevailed in the downstream part of the patches because of the strong vortices that formed at the rear and moved up under the trailing canopy. The open canopy of Sparganium emersum, with its streamlined leaves, had little effect on flow and sediment. 3. Patterns of sediment deposition and composition were closely related to the morphology and canopy structure of plant species and the presence of low velocity above the sediment among the rooted shoots. The mineral particles retained probably originate from bed-load, and the enrichment with finer particles within the patches probably results mainly from size-selective processes during erosion and transport of particles rather than during deposition. The mixed sediment composition within patches suggests that the flow-resistant shoots generate an environment conducive to deposition of all transported particles. 4. Fine sediments within macrophyte beds contained high concentrations of organic matter, carbon, nitrogen and phosphorus. The wide scatter in the relationships between mineral grain size and the content of organic matter and nutrients reflects the spatial and temporal complexity of erosion, transport and sedimentation of mineral and organic particles. 5. Enrichment of sediment within macrophyte beds relative to the surrounding substratum ranged from 780 g organic matter m^–2, 30 g N m^–2 and 25 g P m^–2 for the flow-resistant dense canopies af Callitriche cophocarpa to 150 g organic matter m^–2, 6.6 g N m^–2 and 3.4 g P m^–2 for the open canopies of Sparganium emersum. Retention of nutrient-rich particles within the macrophyte beds is probably of limited importance for plant growth in most lowland European streams, because macrophyte growth is rarely nutrient limited.     

Genomes of Alteromonas australica,a world apart

Background

Alteromonas is a genus of marine bacteria that is very easy to isolate and grow in the laboratory. There are genomes available of the species Alteromonas macleodii from different locations around the world and an Alteromonas sp. isolated from a sediment in Korea. We have analyzed the genomes of two strains classified by 16S rRNA (>99% similarity) as the recently described species Alteromonas australica, and isolated from opposite ends of the world; A. australica DE170 was isolated in the South Adriatic (Mediterranean) at 1000 m depth while A. australica H17^T was isolated from a sea water sample collected in St Kilda Beach, Tasman Sea.

Results

Although these two strains belong to a clearly different species from A. macleodii, the overall synteny is well preserved and the flexible genomic islands seem to code for equivalent functions and be located at similar positions. Actually the genomes of all the Alteromonas species known to date seem to preserve synteny quite well with the only exception of the sediment isolate SN2. Among the specific metabolic features found for the A. australica isolates there is the degradation of xylan and production of cellulose as extracellular polymeric substance by DE170 or the potential ethanol/methanol degradation by H17^T.

Conclusions

The genomes of the two A. australica isolates are not more different than those of strains of A. macleodii isolated from the same sample. Actually the recruitment from metagenomes indicates that all the available genomes are found in most tropical-temperate marine samples analyzed and that they live in consortia of several species and multiple clones within each. Overall the hydrolytic activities of the Alteromonas genus as a whole are impressive and fit with its known capabilities to exploit sudden inputs of organic matter in their environment.

Electronic supplementary material

The online version of this article (doi:10.1186/1471-2164-15-483) contains supplementary material, which is available to authorized users.     

Small-scale burial of macroalgal detritus in marine sediments: Effects of Ulva spp. on the spatial distribution of macrofauna assemblages

Patches of dead seaweeds can deposit, bury, and age into the sediment. Decomposition and release of algal-derived nutrients can influence patterns of distribution of benthic organisms. Here, I investigated how small-scale burial of Ulva spp. affected spatial variation of macrofauna in intertidal sediment. I deliberately buried Ulva detritus under the surface of 50 × 50 cm² patches of sediment in three intertidal flats of the Oosterschelde estuary (The Netherlands). Results showed that there was no accumulation of particulate organic carbon and nitrogen in the sediment at the scales examined. The biomass of microphytobenthos did not show any change and there was evidence that grazing was important all over the study area. Burial did not alter composition and diversity of macrofauna, but some animals (Corophium volutator, Eteone spp. and Scoloplos armiger) had less numbers in the plots where detritus was buried than in the controls. These findings showed that burial of macroalgal detritus does not represent a major source of variation at the scales examined. It is suggested that in these sediments, recycling of detritus is fast and it buffers the effects of excess organic matter in the system.     

Paragonimus paishuihoensis Metacercariae in Freshwater Crabs,Potamon lipkei,in Vientiane Province,Lao PDR

Among Paragonimus species, P. paishuihoensis is one of the most mysterious and poorly understood species. Metacercariae are characterized by having a unique dendritically branched excretory bladder. However, the morphology of the adult worm remains unknown. To date, metacercariae of this species have been reported only in China and Thailand. In this study, we first found P. paishuihoensis metacercariae in freshwater crabs, Potamon lipkei, in Hinheub District, Vientiane, Lao PDR, with a prevalence of 77.7% and the average intensity of 10.3 (range 1-28) metacercariae per crab. The molecular data based on ITS2 and CO1 markers indicated that P. paishuihoensis from Laos and Thailand were almost completely identical and were close to members of the Paragonimus bangkokensis/Paragonimus harinasutai complex. Attempts to infect experimental animals (cats, dogs, and rats) with P. paishuihoensis were unsuccessful, suggesting that these animals might be unsuitable definitive hosts for the species. Further studies are necessary to elucidate the taxonomic status and life cycle of P. paishuihoensis.     

Distribution Patterns of Some Criconematinae in Different Forest Associations

A total of 243 samples from Hemlock-Hardwood, Boreal Forest, and Alpine Tundra associations of New York, Vermont, New Hampshire, and Maine were analyzed for species of Bakernema, Criconema, and Criconemoides and for selected edaphic factors. The Hemlock-Hardwood formation contained 13 species of these genera, but the Boreal Forest and Alpine Tundra contained only Criconema menzeli and Criconemoides sphagni. Criconemoides axeste, C. rusticum, and C. xenoplax were associated primarily with mineral soils that have high pH, low moisture after drainage, and organic matter content of less than 15%. Criconemoides sphagni was associated with organic soils that had low pH, high moisture after drainage, and organic matter content greater than 15%.     

Effect of Crotalaria juncea Amendment on Nematode Communities in Soil with Different Agricultural Histories

Effect of sunn hemp (Crotalaria juncea) hay amendment on nematode community structure in the soil surrounding roots of yellow squash (Cucurbita pepo) infected with root-knot nematodes was examined in two greenhouse experiments. Soils were from field plots treated long-term (LT) with yard-waste compost or no yard-waste compost in LT experiment, and from a short-term (ST) agricultural site in ST experiment. Soils collected were either amended or not amended with C. juncea hay. Nematode communities were examined 2 months after squash was inoculated with Meloidogyne incognita. Amendment increased (P < 0.05) omnivorous nematodes in both experiments but increased only bacterivorous nematodes in ST experiment (P < 0.05), where the soil had relatively low organic matter (<2%). This effect of C. juncea amendment did not occur in LT experiment, in which bacterivores were already abundant. Fungivorous nematodes were not increased by C. juncea amendment in either experiment, but predatory nematodes were increased when present. Although most nematode faunal indices, including enrichment index, structure index, and channel index, were not affected by C. juncea amendment, structure index values were affected by previous soil organic matter content. Results illustrate the importance of considering soil history (organic matter, nutrient level, free-living nematode number) in anticipating changes following amendment with C. juncea hay.     

Do biogenic sulphur compounds in phytodetritus act as cues for deposit-feeder activity? Field experiments and observations on the echiuran worm Maxmuelleria lankesteri

In temperate coastal seas, phytodetritus settling from the spring phytoplankton bloom is a potential food source for benthic deposit-feeders. The ability to exploit this seasonally variable resource could be enhanced by sensitivity to chemical cues signalling its arrival at the seabed. The biogenic sulphur compound dimethylsulphide (DMS), a breakdown product of dimethylsulphonioproprionate (DMSP) produced by some phytoplankton species, is a potential candidate for this role. We investigated the behavioural response of a sedentary surface deposit-feeder, the echiuran worm Maxmuelleria lankesteri, to DMS by observations and manipulative experimentation under natural conditions in a Scottish sea loch. Experimental addition of sediment enriched with DMSP-producing phytoplankton caused no significant increase in either the frequency of feeding by M. lankesteri or the rate of sediment ejection from observed burrows. Naturally occurring (DMSP+DMS) content of surface sediment was low during the winter, then peaked in April before declining in May. There was no consistent relationship between this parameter and rate of sediment ejection from M. lankesteri burrows. The results therefore provide no evidence that M. lankesteri uses DMSP or DMS as a stimulus to increased activity. An observed imbalance between the frequency of surface deposit-feeding and sediment ejection from individual burrows remains unexplained.     

Varying responses of insect herbivores to altered plant chemistry under organic and conventional treatments

The hypothesis that plants supplied with organic fertilizers are better defended against insect herbivores than those supplied with synthetic fertilizers was tested over two field seasons. Organic and synthetic fertilizer treatments at two nitrogen concentrations were supplied to Brassica plants, and their effects on the abundance of herbivore species and plant chemistry were assessed. The organic treatments also differed in fertilizer type: a green manure was used for the low-nitrogen treatment, while the high-nitrogen treatment contained green and animal manures. Two aphid species showed different responses to fertilizers: the Brassica specialist Brevicoryne brassicae was more abundant on organically fertilized plants, while the generalist Myzus persicae had higher populations on synthetically fertilized plants. The diamondback moth Plutella xylostella (a crucifer specialist) was more abundant on synthetically fertilized plants and preferred to oviposit on these plants. Glucosinolate concentrations were up to three times greater on plants grown in the organic treatments, while foliar nitrogen was maximized on plants under the higher of the synthetic fertilizer treatments. The varying response of herbivore species to these strong differences in plant chemistry demonstrates that hypotheses on defence in organically grown crops have over-simplified the response of phytophagous insects.     

Phosphorus dynamics during decomposition of mangrove (Rhizophora apiculata) leaves in sediments

Rhizophora apiculata leaf litter decomposition and the influence of this process on phosphorus (P) dynamics were studied in mangrove and sand flat sediments at the Bangrong mangrove forest, Phuket, Thailand. The remaining P in the mangrove leaf litter increased with time of decomposition to 174% and 220% of the initial amount in the litter in sand flat and mangrove sediment, respectively, although about 50% of the dry weight had been lost. The incorporation of P into the litter was probably associated with humic acids and metal bridging, especially caused by iron (Fe), which also accumulated in considerable amounts in the litter (5-10 times initial concentration). The addition of leaves to the sediment caused increased concentrations of dissolved reactive phosphate (DRP) in the porewater, especially in sand flat sediment. The DRP probably originated from Fe-bound P in the sediment, because decomposition of buried leaf litter caused increased respiration and reduced the redox potential (E_h) in the sediments. Binding of P to refractory organic material and oxidized Fe at the sediment-water interface explains the low release of DRP from the sediment. This mechanism also explains the generally low DRP concentration in the mangrove porewater, the low nutrient content of the R. apiculata leaves, but also the higher total sediment P concentration of the mangrove sediment as compared to sediments outside the mangrove. Both the low release rates for DRP from the sediment and the accumulation of P associated with leaf litter decomposition tend to preserve P in the sediments.     

Reed clonal characteristics and response to disturbance in a semi-arid river

Clonal characteristics of Phragmites mauritianus Kunth. were studied in a semi-arid river where disturbance by flooding is a major driver of reed patch dynamics. Physical disturbance by scouring at the patch boundary restricted clonal expansion, and, contrary to our predictions, rhizomes at the boundary were not specialised for enhanced mobility. Persistence of the central part of the patch was promoted by accumulation of sediment within the patch, including fine clays. The combined effects of scouring and burial produced linear patches with a characteristic raised profile. Clonal characteristics which promoted persistence of P. mauritianus in this habitat included a large bud bank on the rhizomes, a deep, complex rhizome system, and dense, tall stems. The development of the deep, complex rhizome system was promoted by sediment accumulation within the patch. Interactions between physical processes and plant clonal characteristics deserve further attention in aquatic environments, where feedbacks among vegetation patches, flow and sediment movement are common.     

Species- and site-specific bacterial communities associated with four encrusting bryozoans from the North Sea, Germany

Epi- and endozoic bacterial communities associated with four bryozoan species from the Jade (North Sea, Germany) were investigated by the combined application of molecular tools and electron microscopic visualisation of zooids. Denaturing gradient gel electrophoresis of PCR-amplified 16S rRNA gene fragments of associated bacteria displayed specific bacterial community profiles in the examined species Aspidelectra melolontha, Conopeum reticulum, Electra monostachys and Electra pilosa. Actual bacterial epibiosis was only observed on C. reticulum whilst the other bryozoans under investigation were largely free of microbial epibionts. These observations indicated that bryozoan-associated bacteria identified by molecular methods originated from internal cavities of bryozoan zooids. Cluster analysis of DGGE band patterns revealed species-specific bacterial communities in A. melolontha, E. monostachys and E. pilosa. Bacteria associated with C. reticulum were seemingly influenced by site-specific parameters. A comparison of bacterial community profiles between reference and invertebrate surfaces allowed for an interpretation of conspicuous group-specific differences. Operational taxonomic units (OTUs) obtained from a single set of bryozoan replicates that were absent on the inorganic reference samples (mussel shells) were hypothesized to be favourable endobionts. Contrary, OTUs present in the references but absent in bryozoan samples could be assumed to stem from bryozoan-specific defenses against ubiquitous bacterial colonizers. Although there was no experimental evidence for a mutual relationship between prokaryotes and their eukaryotic bryozoan hosts, this study demonstrated that in three out of four bryozoans under investigation associated bacterial communities were characteristically shaped by host attributes.