Structure of root nodules and nitrogen fixation in Egyptian wild herb legumes

Five wild herb legumes (Trifolium resupinatum, Melilotus indica, Medicago intertexta, Trigonella hamosa, and Alhagi murarum) were collected from cultivated lands of the Nile Valley, and compared with clover (Trifolium alexandrinum), a cultivated forage legume. The wild herb legumes exhibited great variation in nodulation percentage, nodule number, nodule mass and acetylene reduction activity with regard to locality. Nodulation of T. resupinatum and M. indica ranged between 50 - 100% and 33 - 100%, respectively, compared to 50 - 100% for T. alexandrinum. The number of nodules formed on T. resupinatum was 9 - 128 and that of M. indica 6 - 39, compared to 13 - 122 nodule per plant for T. alexandrinum. Nodule mass was correlated with nodule number. In M. indica, a small number of nodules was compensated with high specific nitrogenase activity. The herb legumes formed nodules of small size, varying shape (globose, cylindrical, branched, etc.), and of different types (crotalaroid and astragaloid). Microscopic examination of root-nodules from T. resupinatum, M. indica and M. intertexta, showed that these legumes formed indeterminate and effective nodules, containing apical meristems, central symbiotic tissue with characteristic zonation and peripheral vascular bundles. The nodules harboured bacteroids with pleiomorphic morphology. This revised version was published online in July 2006 with corrections to the Cover Date.     

Calcium-oxalate crystals and crystal cells in determinate root nodules of legumes

Early reports of the presence of calciumoxalate crystals in the cortices ofPhaseolus vulgaris root nodules have been confirmed. Crystals were found in all six genera examined (Cajanus, Desmodium, Glycine, Lespedeza, Phaseolus, Vigna) that have determinate nodules and export ureides. They were absent from six genera examined that have indeterminate nodules and export amides. The possible physiological significance of these structures is discussed.     

Nitrate and nitrite reduction in the plant fraction of alfalfa root nodules

The plant fraction of alfalfa ( Medicago sativa L. cv. Aragon) nodules contained both nitrate reductase (NR) and nitrite reductase (NiR). Specific activity of NADH-NR from the cytosol of nodules not treated with NO₃- was about 30 nmol (mg protein)^-1-h^-1 and was not basically affected by NO₃ addition. In contrast, typical specific activity for cytosolic NiR was 1.5 umol (mg protein)^-1h^-1 using methyl viologen as electron donor. This activity strongly increased with NO₃ concentration, probably due to substrate induction. Maximal activity was 3.5 μmol (mg protein)^-1h^-1 at 50 to 200 mM NO₃.
Estimates indicate that the contribution of cytosol to the overall NR and NiR activities of alfalfa nodules is distinctly different: less than 10% and about 70%, respectively. The increasing amounts of NO₂ accumulating in the cytosol upon NO₃, supply, and the different response to NO₃ of bacteroid and cytosolic NRs support the concept that most of this NO₂ comes from the bacteroids.     

Trehalose and trehalase in root nodules from various legumes

Nitrogen-fixing (effective) nodules from various legume- Rhizobium combinations were analyzed for trehalose and other soluble carbohydrates using gas chromatography and for trehalase activity using biochemical assays. Whereas the bacterial disaccharide trehalose was present only in the minority of the nodules, trehalase activity was found in all of them. Extracts from determinate nodules had a higher trehalase activity than extracts from indeterminate nodules. More detailed studies were done on soybean nodules formed in interactions with two effective and 5 ineffective Bradyrhizobium japonicum strains. Only in effective soybean nodules colonized by the strain 61-A-101 was trehalose a major soluble carbohydrate. Irrespective of the wildtype strains used. effective soybean nodules contained about 10 nkat trehalase g⁻¹ fresh weight, whereas the ineffective nodules colonized by mutant strains derived from these wildtype strains contained 2 to 30 times less trehalase. However, a clear correlation between trehalose content and trehalase activity could not be established.     

不同花生品种根瘤固氮特点及其与产量的关系

花生根系着生根瘤,能够直接利用大气中的氮气作为氮源,在花生氮素供应中占有举足轻重的地位.而有关根瘤高效固氮的机理研究甚少.本研究在盆栽条件下,利用¹⁵N示踪技术,研究了19个花生品种根瘤固氮特点及其与产量的关系.结果表明: 不同品种根瘤数量、鲜质量、内含物质和固氮量等指标品种间存在显著差异.根瘤数量和鲜质量变异幅度分别为每盆170.59～696.15个和0.83～3.74 g,变异系数分别为36.1%和41.1%;豆血红蛋白含量和固氮酶活性变异幅度分别为每盆15.51～23.23 mg和2.75～20.46 μmol C₂H₄·h^-1,变异系数分别为13.1%和57.2%,后者明显高于前者,表明固氮酶活性除受豆血红蛋白含量影响外,同时受到其他因素的影响.根瘤固氮和全氮积累量变异幅度分别为每盆0.71～1.82和2.16～3.72 g,变异系数分别为21.6%和12.9%,前者明显高于后者,表明花生根瘤固氮不足时,其他氮源在一定程度上能自动补偿根瘤留下的匮缺.花生以根瘤固氮为主,供氮比例平均占总氮量的2/5以上,最高可达50%,培育高供氮比例的品种,可作为花生减氮栽培的途径之一.上述指标中,除根瘤数量外,其余指标间以及这些指标与产量均呈极显著正相关,表明根瘤固氮生理指标与根瘤供氮能力及最终产量密切相关,提高这些指标有助于同时实现高产和化肥减施.     

Denitrification in lucerne nodules and bacteroids supplied with nitrate

Nodulated lucerne plants ( Medicago sativa L. cv. Aragón) were supplied with 20 m M nitrate. Anaerobically isolated bacteroids of Rhizobium meliloti from these plants were able to denitrify after 48 h treatment. R. meliloti bacteroids behave as total denitrifiers, reducing nitrate to dinitrogen: when acetylene was omitted from the assay medium very little nitrous oxide was recovered. The onset of denitrification activity was coincident with the induction of nitrite reductase activity (EC 1.7.99.3) whereas nitrate reductase activity (EC 1.7.99.4) was constitutive. Whole nodules from plants receiving several doses of nitrate were assayed, in a nitrate-free medium, to monitor denitrification activity dependent on nitrate within the nodules. Denitrification activity was detected after 2 days of 20 m M nitrate supply or after 3 days in the presence of 10 or 5 m M nitrate. These results are discussed in relation to current controversy about nitrate entry into the infection region of nodules. It is concluded that this process occurs more rapidly than suggested in recent research.     

Soybean root and nodule nitrate reductase

Nitrate reductase (NR) activity was followed in root and nodule from Glycine max (L.) Merr. (Cv. Tracy) inoculated with Rhizobium japonicum . Initially, a plus NO^3- in vivo assay was used. When chlorate-resistant mutants were used as inoculum, nodule NR activity was reduced by about 90%. indicating that the bacteroid accounts for much of the normal nodule's NR. With plants 3 to 15 weeks of age nodule NR activity (g fresh weight)^-1 was highest in young plants and root activity highest in old plants. Root and nodule total NR activity increased with plant age and were often not greatly different. Root NR activity correlated with plant NO^3- supply and increased from 0.8 to 11.4 μmol plant^-1 h^-1 as NO^3- was increased from 0 to 3 m M . In contrast, nodule NR activity was high in plants grown without NO^3- and did not appear to increase as nitrate supply to the plant was increased. Nodule activity was 6 to 14 μmol NO^2- plant^-1 h^-1. Use of a minus NO^3- in vivo assay had little affect on root NR activity, but greatly reduced nodule activity. Root tissue was found to have 5 to 38 times more NO^3- than nodule tissue. It is concluded that low nitrate levels within the nodule limit NR activity and that it is improbable that the nodule is a major site of plant nitrate reduction.     

Role of oxygen limitation and nitrate metabolism in the nitrate inhibition of nitrogen fixation by pea

The impact of nitrate (5–15 m M , 2 to 7 days) on nitrogenase activity and nodule-oxygen limitation was investigated in nodulated, 21-day-old plants of a near-isogenic nitrate reductase-deficient pea mutant (A3171) and its wild-type parent ( Pisum sativum L. cv. Juneau). Within 2 days, 10 or 15 m M nitrate, but not 5 m M nitrate, inhibited the apparent nitrogenase activity (measured as in situ hydrogen evolution from nodules of intact plants) of wild-type plants; none of these nitrate levels inhibited the apparent nitrogenase activity of A3171 plants. Nodule-oxygen limitation, measured as the ratio of total nitrogenase activity to potential nitrogenase activity, was increased in both wild-type and A3171 plants by all nitrate treatments. By 3 to 4 days the apparent nitrogenase activity of A3171 and wild-type plants supplied with 5 m M nitrate declined to 53 to 69% of control plants not receiving nitrate. By 6 to 7 days the apparent nitrogenase activity of A3171 plants was similar to the control value whereas that of the wild-type plants continued to decline. From 3 to 7 days, no significant differences in nodule-oxygen limitation were observed between the nitrate (5 m M ) and control treatments. The results are interpreted as evidence for separate mechanisms in the initial (O₂ limitation) and longer-term (nitrate metabolism) effects of nitrate on nitrogen fixation by effectively nodulated pea.     

Distribution of nitrate assimilation between the root and shoot of legumes and a comparison with wheat

Legumes of the Phaseoleae ( Glycine max L. Merr., Phaseolus coccineus L., P. vulgaris L., Vigna radiata L. Wilczek and V. unguiculata L. Walp.), when grown on 10 m M nitrate, had a low in vitro nitrate reductase (NR) activity in the root compared to the shoot (<15%). In legumes of the Vicieae ( Cicer aerietinum L., Pisum sativum L. and Vicia faba L.), Genisteae ( Lupinus albus L.) and Trifolieae ( Medicago sativa L. and M. truncatula Gaertn.), 30–60% of their total NR activity was in the root. The Phaseoleae had a higher nitrate content in the shoot. Decreasing the nitrate supply increased the relative proportion of NR activity in the root of garden pea ( Pisum sativum ) and wheat but did not alter the predominantly leaf-based assimilation of nitrate in Phaseolus vulgaris. When in vitro NR activity of the pea shoot was compared with the in vivo NR activity and the rate of accumulation of reduced N by this tissue, similar values were obtained. In vitro NR activity of the wheat shoot was 5 times its in vivo NR activity and 12 times its rate of accumulation of reduced N.     

The partitioning of nitrate assimilation between root and shoot of higher plants

Abstract The partitioning of nitrate assimilation between root and shoot of higher plant species is indicated by the relative proportions of total plant nitrate reductase activity (NRA) in the two plant parts and the relative concentrations of nitrate and reduced N in the xylem sap. These have been collated here from the literature and temperate and tropical species compared. Both the distribution of NRA and xylem sap nitrate: reduced N indicate that the following four generalizations can be made.

• 1 Temperate, perennial species growing in low external nitrate concentrations (about 1 mol m^?3) carry out most of their nitrate assimilation in the root. As external nitrate concentration increases (in the range found in agricultural soils, 1–20 mol m^?3), shoot nitrate assimilation becomes increasingly important.
• 2 Temperate, annual legume species growing in low external nitrate concentrations carry out most of their nitrate assimilation in the root. Shoot nitrate assimilation increases in importance as external nitrate concentration is increased.
• 3 Temperate, annual non-legume species vary greatly in their partitioning of nitrate assimilation between root and shoot when growing in low external nitrate concentrations. Regardless of the proportion carried out in the root at low external nitrate concentrations, nitrate assimilation in the shoot becomes increasingly important as external nitrate concentration is increased.
• 4 Tropical and subtropical species, annual and perennial, carry out a substantial proportion of their nitrate assimilation in the shoot when growing in low external nitrate concentrations. The partitioning of nitrate assimilation between root and shoot remains constant as external nitrate concentration increases.

It is proposed that a greater proportion of nitrate assimilation occurs in the shoot when an increase in the rate of nitrate uptake does not induce an increase in NR level in the root. Thus, a greater proportion of the nitrate taken up remains unassimilated and is passed into the xylem. A constant partitioning of nitrate assimilation between root and shoot is achieved by balancing NR levels in the root with rates of nitrate uptake. The advantages and disadvantages of assimilating nitrate in either the root or shoot are discussed in relation to temperate and tropical habitats.     

Nitrate reductase and nitrate accumulation in relation to nitrate toxicity in Boronia megastigma

Moderate levels of N were toxic to the native Australian plant boronia (Boronia megastigma Nees). As NO^-₃ is the major N form available for plants under cultivated conditions, NO^-₃ reduction and accumulation patterns in boronia were examined following the supply of various levels of NO^-₃ to understand the physiological basis of this toxicity. At a low level of supplied NO^-₃ [15 mmol (plant)^-1], NO^-₃ was reduced without any detectable accumulation and without nitrate reductase activity (NRA) reaching its maximum capacity. When higher NO^-₃ levels [≥25 mmol (plant)^-1] were supplied, both NRA and NO^-₃ accumulation increased further. However, NRA increased to a maximum of ca 500 nmol NO^-₃ (g fresh weight)^-1 h^-1, both in the roots and leaves, irrespective of a 4-fold difference in the levels of supplied NO^-₃, whereas NO^-₃ continued to accumulate in proportion to the level of supplied NO^-₃. Chlorotic toxicity symptoms appeared on the leaves at an accumulation of ca 32 μmol NO^-₃ (g fresh weight)^-1. High endogenous NO^-₃ concentrations inhibited NRA. The low level of NRA in boronia was not limited by NO^-₃ or electron donor availability. It is concluded that the low NR enzyme activity is a genetic adaptation to the low NO^-₃ availability in the native soils of boronia. Thus, when NO^-₃ supply is high, the plat cannot reduce it at high rates, leading to large and toxic accumulations of the ion in the leaf tissues.     

Nitrate reductase and its role in nitrate assimilation in plants

Nitrate reductase (EC 1.6.6.1) is an enzyme found in most higher plants and appears to be a key regulator of nitrate assimilation as a result of enzyme induction by nitrate. The biochemistry of nitrate reductase has been elucidated to a great extent and the role that nitrate reductase plays in regulation of nitrate assimilation is becoming understood.     

Regulation of the assimilation of nitrate in Chlamydomonas reinhardii

In Chlamydomonas, The assimilation of ammonia proceeds through the glutamine synthetaseglutamate synthase pathway. The primary target in the regula     

Sulfide-induced dissimilatory nitrate reduction to ammonia in anaerobic freshwater sediments

Abstract: Different reduced sulfur compounds (H₂S, FeS, S₂O₃²⁻) were tested as electron donors for dissimilatory nitrate reduction in nitrate-amended sediment slurries. Only in the free sulfide-enriched slurries was nitrate appreciably reduced to ammonia (     ), with concomitant oxidation of sulfide to S⁰ (     ). The initial concentration of free sulfide appears as a factor determining the type of nitrate reduction. At extremely low concentrations of free S²⁻ (metal sulfides) nitrate was reduced via denitrification whereas at higher S²⁻ concentrations, dissimilatory nitrate reduction to ammonia (DNRA) and incomplete denitrification to gaseous nitrogen oxides took place. Sulfide inhibition of NO- and N₂O- reductases is proposed as being responsible for the driving part of the electron flow from S²⁻ to NH₄⁺.     

Enzymes of ammonia assimilation in root nodules of Trigonella foenum-graecum

The main pathway of ammonia assimilation in the root nodules of Trigonella foenum-graecum is via nodule cytosol glutamine synthetase-glutamate synthase.     

Nitrogen fixation and nitrate utilization by marine and freshwater Beggiatoa

Four newly isolated marine strains of Beggiatoa and five freshwater strains were tested for nitrogen fixation in slush agar medium. All strains reduced acetylene when grown microaerobically in media containing a reduced sulfur source and lacking added combined nitrogen. The addition of 2 mmol N, as nitrate or ammonium salts, completely inhibited this reduction. Although not optimized for temperature or cell density, acetylene reduction rates ranged from 3.2 to 12 nmol·mg prot^-1 min^-1. Two freshwater strains did not grow well or reduce acetylene in medium lacking combined nitrogen if sulfide was replaced by thiosulfate. Two other strains grew well in liquid media lacking both combined nitrogen and reduced sulfur compounds but only under lowered concentrations of air. All freshwater strains grew well in medium containing nitrate as the combined nitrogen source. Since they did not reduce acetylene under these conditions, we infer that they can assimilate nitrate.