Simultaneous induction of postabscission and germination mRNAs in cultured dicotyledonous embryos

Cloned mRNAs identify three programs of gene expression in cotton (Gossypium hirsutum L.) embryos that are associated with the maturation (reserve accumulation) stage, the postabscission stage, which is marked by expression of Late-embryogenesis-abundant (Lea) mRNAs, and germination (broadly defined as including all events through early postgerminative growth). In order to test if the regulation of these programs is the same in other dicotyledonous species, their expression was studied in normal and cultured maturation-stage, postabscission-stage, and mature embryo-stage embryos or seed of oilseed rape (Brassica napus L.), soybean (Glycine max [L.] Merr.), and tobacco (Nicotiana tabacum L.) using cotton and other cDNA probes. During postabscission, Lea mRNAs accumulated in all test species and were induced in earlier maturation-stage embryos by excision and culture on basal medium. Abscisic acid often enhanced this induction in the test species. Germinationspecific mRNAs were induced in cultured maturationstage and postabscission-stage embryos of all test species. These results indicate that the regulation of embryonic and germination programs is similar in all dicotyledons tested. Because excised embryos simultaneously induced postabscission and germination programs, the effects of exogenous growth regulators and other factors on such embryos probably reflect stress responses of germinating mature embryos rather than the identity of endogenous regulators of embryogenesis.Abbreviations ABA abscisic acid - GA₃ gibberellic acid - DPA days postanthesis - Lea late embryogenesis abundant - MAT maturation stage - PA postabscission stage - ME mature embryo stage We thank J.J. Harada (Department of Botany, University of California, Davis, USA) and S.L. Berry-Lowe (Department of Biology, University of Colorado, Colorado Springs, USA) for plasmids. John E. Stacy is acknowledged for help with the Figures. This work was supported by grant GM29495 from the National Institute of Health to G.A.G and by individual research/travel grants from the Norwegian Agricultural Research Council (NLVF) to each of the authors.     

Improvements in immunostaining samples embedded in methacrylate: localization of microtubules and other antigens throughout developing organs in plants of diverse taxa

Microtubules are important in plant growth and development. Localizing microtubules in sectioned material is advantageous because it allows any tissue of interest to be studied and it permits the positional relations of the cells within the organ to be known. We describe here a method that uses semi-thin (0.5–2 m) sections of material embedded in butyl-methylmethacrylate, to which 10 mM dithiothreitol was added. After removing the embedding material and using indirect immunofluorescence staining, we obtain clear images of microtubules, actin microfilaments, callose and pulse-fed bromodeoxyuridine. This method works on the root tissues of Arabidopsis thaliana(L.) Heynh, Pinus radiataD. Don, Zamia furfuraceaAit., Azolla pinnataR. Br. and on sporophytic tissues of Funaria hygrometricaHedw. In general, most of the cells in the organs studied are successfully stained. Using this method, we find that interphase meristematic cells in all of these species have microtubules not only in the usual cortical array but also throughout their cytoplasm. The presence of the calcium chelator ethylene glycol-bis(-aminoethyl ether)N,N,N,N-tetraacetic acid EGTA in fixation buffers led to some tissue damage, and did not enhance the preservation of microtubules. The common assumption that EGTA-containing buffers stabilize plant microtubules during fixation appears unwarranted.Abbreviations BrdU 5-bromodeoxyuridine - DTT dithiothreitol - EGTA ethylene glycol-bis(-aminoethyl ether) - N,N,N,N tetraacetic acid We thank Ann Cork for technical assistance, Professor B.E.S. Gunning (Australian National University) and Drs. A.R. Hardham (A.N.U.) and R.E. Williamson (A.N.U.) for intellectual and material support, Dr D. McCurdy (A.N.U.) for the purified anti-actin antibody, and Professor B. Stone (La Trobe University, Melbourne, Australia) for generously providing the anti-callose antibody. We also thank the Electron Microscopy Unit of A.N.U. for the use of facilities. L.C.F. gratefully acknowledges financial support from the National Sciences and Engineering Research Council of Canada.     

A light and electron microscopic study of the ciliated urn of Phascolosoma agassizii (sipunculida)

Summary The free swimming ciliated urn found in the coelomic fluid of Phascolosoma agassizii has been studied by electron microscopy. The urn is a multicellular structure composed of three cell types: (a) ciliated cells which possibly function in capturing cell debris and foreign particles; (b) cupola cells which are capable of phagocytozing latex particles; and (c) lobe cells which are capable of phagocytozing carbon particles. The lobes are separated from the ciliated cells by a semilunar area, with mucoprotein staining characteristics, containing fibrils which appear to be the structural support for the urn. Ciliated cells and lobes are attached to the semilunar area by hemidesmosomes.This work is based on a thesis submitted in partial fulfillment of the requirements for the degree Master of Arts in the Department of Biology, San Francisco State University, San Francisco, California, U.S.A.I wish to thank Dr. John C. Lee, formerly of the Department of Pathology, University of California Medical Center, San Francisco, for encouragement and use of his electron microscope facilities     

Electrical spinal cord stimulation for spastic movement disorders.

Spinal cord stimulation seems today a promising method to improve spasticity. The experiences of two different clinics (Zürich and Freiburg i.Br.) are reported with long-term assessment up to 28 months. The objective data with measurement of stretch and H reflexes support the clinical results. An experimental study on animals does not permit a definitive explanation, but some hypotheses can be suggested.     

Solid-state fermentation of carob pods byAspergillus niger for protein production: effect of particle size

Two strains ofAspergillus niger were cultured in solid-state fermentation system on carob pods ground from 1.25 to 8 mm diam. A particle size of 2.5 mm gave the highest protein content of the final product (20%, w/w) and 52% of the total soluble carbohydrates were utilized. The total tannin concentration of the carob pods decreased by 83% in 4 days of fermentation.T. Smail and O. Salhi are with the Laboratory of Microbiology, U.R.B.A.F., Institute of Biology, Tizi-Ouzou University, Algeria. J.S. Knapp is with the Department of Microbiology, The University of Leeds, Leeds LS2 9JT, UK;     

Extension-growth responses and expression of flavonoid biosynthesis genes in the Arabidopsis hy4 mutant

The hy4 mutant of Arabidopsis thaliana(L.) Heynh. was previously shown to be impaired in the suppression of hypocotyl extension specifically by blue light. We report here that hy4 is altered in a range of blue-light-mediated extension-growth responses in various organs in seedlings and mature plants: it shows greater length of bolted stems, increased petiole extension and increased leaf width and area in blue light compared to the wild type. The hy4 mutant shows decreased cotyledon expansion in both red and blue light compared to the wild type. Anthocyanin formation and the expression of several flavonoid biosynthesis genes is stimulated by blue light in the wild type but to a much lower extent in hy4. The results indicate that the HY4 gene product is concerned with the perception of blue light in a range of extension-growth and gene-expression responses in Arabidopsis.Abbreviations DFR dihydroflavonol reductase - CHS chalcone synthase - CHI chalcone isomerase We thank the UK Agricultural and Food Research Council for supporting this work through the award of a research grant to G.I.J. We are grateful to Robert Brown for excellent technical assistance and Drs B.W. Shirley (Department of Biology, Virginia Polytechnic Institute and State University, Blacksburg, USA), C.D. Silflow (Department of Genetics and Cell Biology, University of Minnesota, St. Paul, USA) and I.E. Somssich (Department of Biochemistry, Max-Planck-Institut, Köln, Germany) for providing plasmid DNA.     

Analysis of higher-order neuronal interactions based on conditional inference

 Higher-order neural interactions, i.e., interactions that cannot be reduced to interactions between pairs of cells, have received increasing attention in the context of recent attempts to understand the cooperative dynamics in cortical neural networks. Typically, likelihood-ratio tests of log-linear models are being employed for statistical inference. The parameter estimation of these models for simultaneously recorded single-neuron spiking activities is a crucial ingredient of this approach. Extending a previous investigation of a two-neuron system, we present here the general formulation of an exact test suited for the detection of positive higher-order interactions between m neurons. This procedure does not require the estimation of any interaction parameters and additionally optimizes the test power of the statistical inference. We apply the approach to a three-neuron system and show how second-order and third-order interactions can be reliably distinguished. We study the performance of the method as a function of the interaction strength. Received: 18 January 2002 / Accepted in revised form: 26 November 2002 / Published online: 13 March 2003 RID="*" ID="*" Present address: Institute for Theoretical Biology, Humboldt University, 10115 Berlin, Germany Correspondence to: R. Gütig (e-mail: r.guetig@biologie.hu-berlin.de, Tel.: +49 30 2093 9112, Fax: +49 30 2093 8801) Acknowledgements. We thank Shun-ichi Amari and Hiro Nakahara for valuable discussions on the information geometry of the exponential family of probability distributions underlying the present approach. Supported in part by the Studienstiftung des deutschen Volkes, the German-Israeli Foundation for Scientific Research and Development (GIF), the Deutsche Forschungsgemeinschaft (DFG), and the Institut für Grenzgebiete der Psychologie, Freiburg.     

Permeabilization of the plasmalemma and wall of soybean root cells to macromolecules

A technique has been developed that results in the reversible permeabilization of the cell wall and plasmalemma of soybean (Glycine max (L.) Merr.) root cells grown in suspension and callus culture. Cells in culture are treated with saponin (0.1 mg/ml) for 15 min at room temperature. They are then coincubated in separate experiments with fluorescent-derivatized dextrans (20–70 kDa) or fluorescein-conjugated goat anti-rabbit immunoglobulin G to ascertain the exclusion size of macromolecules capable of diffusing across the cell wall and plasmalemma into the cytoplasm. Following an incubation period of 30 min, it was observed by conventional and confocal fluorescence microscopy that all derivatized macromolecules tested (20–140 kDa) could be incorporated into the cytoplasm, but not into the vacuole. This procedure did not appear to affect cell viability adversely. A normal doubling time was observed for these cells following the permeabilization procedure.Abbreviations FDA fluorescein diacetate - FITC-20 kDa, FITC-40 kDa, FITC-70 kDa dextrans fluorescein-derivatized 20-kDa, 40-kDa, and 70-kDa dextrans - IgG immunoglobulin G - kDa kilodalton Paramjit K. Gharyal wishes to thank the Nitrogen Availability Program at Michigan State University for financial support. We also thank Edwin de Feijter of Meridian Instruments for technical assistance in performing the confocal measurements. This work was supported by a grant from the U.S. — Israel Binational Agricultural Research and Development Fund (BARD project No. US-1384-87).     

Über Leptombündel und isolierte Siebröhren sowie deren Korrelationen zu den übrigen Leitungsbahnen in der Sprossachse

Ohne ZusammenfassungMit 13 TextabbildungenTeil einer Habilitationsschrift der naturw.-mathem. Fakultät der Universität Freiburg i. Br. (Siehe auch Planta52 121–143.)     

中国牛肝菌目的研究和增补

在研究我国川西、滇、桂、海南岛的牛肝菌目标本中,发现二新种:网盖金牛肝菌(Aureoboletus reticuloceps)和黑牛肝菌(Boletus nigricans),后者属黑牛肝菌组,新组(Boletus sect.Nigres)。并报道了婆罗洲牛肝菌、美丽牛肝菌、怪形牛肝菌、焰色牛肝菌、黑紫牛肝菌、长柄条孢牛肝菌和西藏金牛肝菌的分布型和所呈现的印度——马来西亚热带成分的相适关联。     

Narrowing of the preprophase microtubule band is not required for cell division plane determination in cultured plant cells

Summary. In most higher-plant cells, cortical microtubules form a tightly focused preprophase band (PPB) that disappears with the onset of prometaphase, but whose location defines the future location of the cell plate at the end of cytokinesis. It is unclear whether the PPB microtubules themselves designate the precise area where the cell plate will insert, or rather if these microtubules are responding to a hierarchical signal(s). Here we show that narrowing of the microtubules within the PPB zone is not necessary for proper division plane determination. In cultured tobacco BY-2 cells in which PPB microtubules are depolymerized, the phragmoplast can still accurately locate and insert at the proper site. The data do not support a role for PPB microtubule narrowing in focusing the signal that is used later by the phragmoplast to position the cell plate; rather, proper phragmoplast positioning is more likely a consequence of a non-microtubule positional element. Although the PPB microtubules do not directly mark the division site, we show that they are required for accurate spindle positioning, an activity that presets the future growth trajectory of the phragmoplast and is necessary for insuring high-fidelity cell plate positioning. Correspondence and reprints: Department of Biology, Pennsylvania State University, University Park, PA 16802, U.S.A. Present address: Winship Cancer Institute, Emory University School of Medicine, Atlanta, Georgia, U.S.A.     

Roles of microtubules and cellulose microfibril assembly in the localization of secondary-cell-wall deposition in developing tracheary elements

Summary. The roles of cellulose microfibrils and cortical microtubules in establishing and maintaining the pattern of secondary-cell-wall deposition in tracheary elements were investigated with direct dyes to inhibit cellulose microfibril assembly and amiprophosmethyl to inhibit microtubule polymerization. When direct dyes were added to xylogenic cultures of Zinnia elegans L. mesophyll cells just before the onset of differentiation, the secondary cell wall was initially secreted as bands composed of discrete masses of stained material, consistent with immobilized sites of cellulose synthesis. The masses coalesced, forming truncated, sinuous or smeared thickenings, as secondary cell wall deposition continued. The absence of ordered cellulose microfibrils was confirmed by polarization microscopy and a lack of fluorescence dichroism as determined by laser scanning microscopy. Indirect immunofluorescence showed that cortical microtubules initially subtended the masses of dye-altered secondary cell wall material but soon became disorganized and disappeared. Although most of the secondary cell wall was deposited in the absence of subtending cortical microtubules in dye-treated cells, secretion remained confined to discrete regions of the plasma membrane. Examination of non-dye-treated cultures following application of microtubule inhibitors during various stages of secondary-cell-wall deposition revealed that the pattern became fixed at an early stage such that deposition remained localized in the absence of cortical microtubules. These observations indicate that cortical microtubules are required to establish, but not to maintain, patterned secondary-cell-wall deposition. Furthermore, cellulose microfibrils play a role in maintaining microtubule arrays and the integrity of the secondary-cell-wall bands during deposition.Correspondence and reprints: Department of Biological Sciences, University of Rhode Island, Kingston, RI 02881, U.S.A.Present address: Biology Editors Co., Peacedale, Rhode Island, U.S.A.Present address: Department of Biology and Marine Biology, Roger Williams University, Bristol, Rhode Island, U.S.A.Present address: Department of Crop Science and Department of Botany, North Carolina State University, Raleigh, North Carolina, U.S.A.     

Further Readings in Geomicrobiology

The Biology of Cyanobacteria. N. G. Carr and B. A. Whitton (eds.). Botanical Monographs, Vol. 19. Blackwell Scientific Publications, Oxford, U.K., 1982 (also University of California Press), xi + 688 pp., $75.00 (U.S.); £42.00 sterling, hardcover.

Earth's Earliest Biosphere: Its Origin and Evolution. J. William Schopf (ed.). Princeton University Press, Princeton, NJ, 1983. With 67 tables, 97 figures, and 47 photographs, xxv + 543 pp. Cloth, $95.00; paper, $42.50.     

The monoclonal antibody JIM19 modulates abscisic acid action in barley aleurone protoplasts

A panel of hybridoma products generated against pea (Pisum sativum L.) guard-cell protoplasts has been assayed for anti-abscisic acid (ABA) biological activity in barley (Hordeum vulgare L.) aleurone protoplasts. The effects of the antibodies on ABA-induced accumulation of mRNA transcribed from RAB-16, a gene responsive to ABA, were determined. Most of the antibodies, and culture medium, had no effect, but five monoclonal antibodies (MAbs) were found to inhibit ABA-induced RAB-16 gene expression and one MAb enhanced it. The effects of one inhibitory MAb, JIM19, were studied in some detail. These effects were specific to ABA-induced events, as incubation with JIM19 had no effect on the expression of a constitutively-expressed gene, GAPDH, encoding glyceraldehyde-3-phosphate dehydrogenase, and only a slight effect on the production of -amylase induced by gibberellic acid. Increasing concentrations of ABA in the incubation medium partly overcame the inhibitory effect of JIM19. Immunolabelling and biological activity remained together during immuno-purification of JIM19 from hybridoma culture supernatant. Immunoblotting of JIM19 to membrane preparations from barley aleurone protoplasts revealed that JIM19 recognised a number of proteins.Abbreviations ABA abscisic acid - GA gibberellin - GA₃ gibberellic acid - GAPDH gene encoding glyceraldehyde-3-phosphate dehydrogenase - GCP guard-cell protoplast - MAb monoclonal antibody - RAB (gene) responsive to ABA We thank the Agricultural and Food Research Council and The Nuffield Foundation for financial support, Professor Keith Roberts (John Innes Institute, Norwich, UK) for advice and generous use of his laboratory and Jan Peart (John Innes Institute) for animal cell culture. S.J.N. is grateful to Professor Colin Hawkes (University of the West of England, Bristol) for his continued support of this project.     

The protein-body proteins phytohemagglutinin and tonoplast intrinsic protein are targeted to vacuoles in leaves of transgenic tobacco

To demonstrate the relationship between protein-bodies in seeds and vacuoles in other tissues, we expressed the coding sequences of two bean (Phaseolus vulgaris L.) protein-body proteins in tobacco (Nicotiana tabacum L.). We chose phytohemagglutinin-L (PHA-L) and tonoplast intrinsic protein (TIP) as representatives of the protein-body contents and protein-body membrane, respectively. The location of the two proteins in the leaves of transgenic tobacco was examined by immunocytochemistry and in preparations of isolated vacuoles. Tonoplast intrinsic protein accumulates primarily in tonoplasts in tobacco leaves, whereas PHA is found exclusively in the vacuolar sap, showing that the signals that target proteins to protein-bodies and their limiting membranes in seeds are correctly recognized in leaves. This observation provides further evidence that proteinbodies of dicotyledonous seeds should be considered as protein-storage vacuoles.Abbreviations TIP tonoplast intrinsic protein - PHA phytohemagglutinin - SDS-PAGE sodium dodecyl sulfate-polyacrylamide gel electrophoresis This work has been supported by a grant from the U.S. Department of Agriculture Competitive Research Grants Office to Maarten J. Chrispeels. Herman Höfte is a recipient of a Postdoctoral Fellow-ship from the European Molecular Biology Organization. Craig Dickinson is a recipient of a National Institutes of Health Postdoctoral Fellowship. Loîc Faye was on leave from the Centre National de la Recherche Scientifique, UA203, Université de Rouen, Mont Saint Aignan France and supported by a cooperative CNRS — National S cience Foundation grant. The mention of vendor or product in this paper does not imply that they are endorsed or recommended by the U.S. Department of Agriculture over vendors of similar products not mentioned. We thank Jürgen Denecke for providing plasmid pDE1001, Antje von Schaewen for the plant expression cassette and Marie-Theres Hauser for the modified vacuole preparation protocol.