Sesbanimide A and related tumor inhibitors from Sesbania drummondii: Structure and chemistry

Extracts of Sesbania drummondii seed have yielded three new glutarimide tumor inhibitors which are markedly active in the PS leukemia (in vivo) system and in the KB cell culture system. Structures of sesbanimide A, sesbanimide B, sesbanimide C, acetylation products of the sesbanimides and five compounds obtained by hydrogenating sesbanimide A under mild conditions have now been established using high-field ¹H NMR, ¹³C NMR and mass spectral correlations. Treatment of sesbanimide A diacetate with sodium bicarbonate in aqueous methanol gives rapid elimination of acetic acid and two subsequent products derived via solvolysis of the glutarimide ring.     

Tetraphyllin B from Adenia digitata

Tetraphyllin B has been isolated in good yield from the South African plant Adenia digitata. Its structure was established by ¹H and ¹³C NMR.     

Biosynthesis of ecdysterone from cholesterol in Taxus baccata

Biosynthesis of ecdysterone from [4-¹⁴C, 3-³H]cholesterol in Taxus baccata does not involve obligatory oxidation at C-3 during the formation of the A/B-cis ring junction.     

Furanoheliangolides from Viguiera greggii

Three furanoheliangolide sesquiterpene lactones were isolated from Viguiera greggii, including a novel compound, 1,2-dehydrozexbrevin B, and the previously characterized zexbrevin and zexbrevin B. Structures were determined by spectral methods, chiefly ¹H and ¹³C NMR. Based on present knowledge, there appear to be no major differences between the terpenoid chemistry of Viguiera and that of Helianthus, a genus believed to be very closely related to Viguiera on morphological grounds.     

FT-IR and 1H NMR spectroscopic evidence of sugar ring conformational change in NH4GpG on complexation to form cis-[Pt(NH3)2(GpG)]+

The conformational change of the ribose ring in NH₄GpG and cis-[Pt(NH₃)₂(GpG)]⁺ was confirmed by FT-IR spectroscopic evidence as being C2′-endo, C3′-endo, anti, gg sugar ring pucker in the solid state. These results were compared with ¹H NMR spectral data in aqueous solution. The FT-IR spectrum of NH₄GpG shows marker bands at 802 cm^?1 and 797 cm^?1 which are assigned to the C3′-endo, anti, gg sugar-phosphate vibrations of ribose (?pG) and ribose (Gp?), respectively. The FT-IR spectrum of cis-[Pt(NH₃)₂(GpG)]⁺ (with N7N7 chelation in the GpG sequence) shows a marker band at 800 cm^?1 which is assigned to the C3′-endo, and a new shoulder band at 820 cm^?1 related to a C2′-endo ring pucker. The ribose conformation of (?pG) moiety in NH₄-GpG, C3′-endo, anti, gg changes into C2′-endo, anti, gg when a platinum atom is chelated to N7N7 in the GpG sequence.     

Hydroxycinnamic acid esters from Polygala chamaebuxus

Three new glycosides have been isolated from the aerial parts of Polygala chamaebuxus by preparative liquid chromatography on an axially-compressed silica column. The compounds were identified as 1,3-diesters of β-D-fructofuranosyl-α-D-glucopyranoside with sinapoyl, feruloyl and acetyl ester moieties on the furanose ring. The structures were elucidated by a combination of chemical and spectroscopic methods (D/CI-MS, ¹H and ¹³C NMR).     

A quasi-elastic laser light scattering study of tubulin and microtubule protein from bovine brain

Quasi-elastic light scattering has been used to characterize the oligomeric properties of solutions of glycerol-cycled bovine microtubule protein, and the properties of the 30 S oligomeric species and 6 S tubulin heterodimer prepared by gel filtration on Sepharose 6B. It is shown that in dimer preparations, as little as 0.04% by number of 30 S rings would account for the difference between an observed mean diffusion coefficient D_{20, W} = 3.1 × 10^?7 cm² s^?1 and the value of D_{20, W} = 5.1 × 10^?7 cm² s^?1 calculated for tubulin dimer of M_rel 100,000. The 30 S ring has an observed diffusion coefficient of D_{20, W} = 0.49 × 10^?7 cm² s^?1. These values are not changed significantly by the presence of 4 m-glycerol, indicating the persistence of 6 S and 30 S forms for dimer and ring, respectively.Mixtures of ring and dimer components of this preparation behave as a non-interacting two-component system, indicating the absence of substantial re-equilibration between the species at 5 °C and pH 6.5.The effect of salt on ring and microtubule protein samples indicates partial dissociation, consistent with the formation of additional intermediate oligomeric forms.In quasi-elastic light scattering measurements adapted to kinetic studies, changes in the oligomeric composition of microtubule protein are detected in the early stages of the reversible assembly process at pH 6.5. A 25% decrease in scattered light intensity, without significant change in mean diffusion coefficient, indicates the lability of the ring oligomeric structures, which undergo partial transformation to alternative oligomeric species under these assembly conditions.     

Catabolism of 6-aminolaevulinic acid in etiolated Euglena gracilis

[4-¹⁴C]-δ-Aminolaevulinic acid (δ-ALA) was employed to study the specificity of δ-ALA incorporation into chlorophyll in etiolated Euglena gracilis. Degradation of chlorophyll a to acetate and propionate, obtained from ring B, indicated that, although some of the radioactivity was incorporated, it did not result from incorporation of intact δ-ALA.     

Isolation and identification of 2-hydroxyplectaniaxanthin from Rhodotorula aurantiaca

A new trihydroxyl carotenoid has been isolated from the yeast Rhodotorula aurantiaca (Saito) Lodder C.B.S. 317 and identified as 2-hydroxyplectaniaxanthin (3′,4′-didehydro,1′,2′-dihydro-β, ψ-caroten-2,1′,2′-triol). Its m.p., partition coefficient, _Rf, extinction coefficient, ms and NMR spectra are reported. Since the hydroxyl group at C-2 of the β-ionone ring is unusual, a possible mechanism for the biosynthesis of this carotenoid has been proposed.     

Four analogues of spiroleptosphol isolated from Leptosphaeria doliolum

Spiroleptosphol B (2), spiroleptosphol C (3), norleptosphol C (4) and hydroleptosphol (5) were isolated from ascomycete Leptosphaeria doliolum. Detailed ¹H and ¹³C NMR spectral analyses revealed these were structural analogues of spiroleptosphol (1) which we have recently isolated from the same fungi. Spiroleptosphol B (2) carried an unprecedent 5,3-dioxatricyclo[4.4.0.1^1.4]undecane framework in place of the spirobicyclo ring system of 1. Spiroleptosphol C (3) was a 17-(R)-hydroxy derivative of 1. Norleptosphol C (4) was deduced to be the monocyclic structure biosynthetically resulted by decarboxylation from 3. Although 5 gave broaden ¹H NMR spectrum, it was gradually transformed to 2 which suggested being a hydrolysate of 1.     

Selenium-containing tRNAs from Clostridium sticklandii. Cochromatography of seleno-tRNA I with l-valyl-tRNA

It has been previously shown that Clostridium sticklandii specifically synthesized three readily separable ⁷⁵Se-labeled tRNAs, designated seleno-tRNAs I, II and III, and the partially purified seleno-tRNA II cochromatographed with l-prolyl-tRNA on DEAE-Sephadex A-50 (Chen, C.S. and Stadtman, T.C. (1980) Proc. Natl. Acad. Sci. U.S.A. 77, 1403–1407). In the present study a highly purified ⁷⁵Se-labeled tRNA I was obtained by chromatography on benzoylated DEAE-cellulose, DEAE-Sephadex A-50 and Sepharose 4B. The ⁷⁵Se-labeled tRNA I cochromatographed with an l-valine-accepting species on DEAE-Sephadex A-50 and Sepharose 4B. Addition of a 285-fold molar excess of unlabeled l-valine to the l-valine acceptor activity assay mixture markedly decreased the amount of l-[¹⁴C]valine bound to seleno-tRNA I.     

Protonation of kanamycin A: Detailing of thermodynamics and protonation sites assignment

Protonation of an aminoglycoside antibiotic kanamycin A sulfate was studied by potentiometric titrations at variable ionic strength, sulfate concentration and temperature. From these results the association constants of differently protonated forms of kanamycin A with sulfate and enthalpy changes for protonation of each amino group were determined. The protonation of all amino groups of kanamycin A is exothermic, but the protonation enthalpy does not correlate with basicity as in a case of simple polyamines. The sites of stepwise protonation of kanamycin A have been assigned by analysis of ¹H-¹³C-HSQC spectra at variable pH in D₂O. Plots of chemical shifts for each H and C atom of kanamycin A vs. pH were fitted to the theoretical equation relating them to pK_a values of ionogenic groups and it was observed that changes in chemical shifts of all atoms in ring C were controlled by ionization of a single amino group with pK_a 7.98, in ring B by ionization of two amino groups with pK_a 6.61 and 8.54, but in ring A all atoms felt ionization of one group with pK_a 9.19 and some atoms felt ionization of a second group with pK_a 6.51, which therefore should belong to amino group at C3 in ring B positioned closer to the ring A while higher pK_a 8.54 can be assigned to the group at C1. This resolves the previously existed uncertainty in assignment of protonation sites in rings B and C.     

Active-Site Structure of the Thermophilic Foc-Subunit Ring in Membranes Elucidated by Solid-State NMR

F_oF₁-ATP synthase uses the electrochemical potential across membranes or ATP hydrolysis to rotate the F_oc-subunit ring. To elucidate the underlying mechanism, we carried out a structural analysis focused on the active site of the thermophilic c-subunit (TF_oc) ring in membranes with a solid-state NMR method developed for this purpose. We used stereo-array isotope labeling (SAIL) with a cell-free system to highlight the target. TF_oc oligomers were purified using a virtual ring His tag. The membrane-reconstituted TF_oc oligomer was confirmed to be a ring indistinguishable from that expressed in E. coli on the basis of the H⁺-translocation activity and high-speed atomic force microscopic images. For the analysis of the active site, 2D ¹³C-¹³C correlation spectra of TF_oc rings labeled with SAIL-Glu and -Asn were recorded. Complete signal assignment could be performed with the aid of the C^α_i+1-C^α_i correlation spectrum of specifically ¹³C,¹⁵N-labeled TF_oc rings. The C^δ chemical shift of Glu-56, which is essential for H⁺ translocation, and related crosspeaks revealed that its carboxyl group is protonated in the membrane, forming the H⁺-locked conformation with Asn-23. The chemical shift of Asp-61 C^γ of the E. coli c ring indicated an involvement of a water molecule in the H⁺ locking, in contrast to the involvement of Asn-23 in the TF_oc ring, suggesting two different means of proton storage in the c rings.     

Amphidinol C,a major polyketide from an Irish strain of the dinoflagellate Amphidinium carterae

An Irish strain of the dinoflagellate Amphidinium carterae was previously shown to produce antibacterial amphidinol derivatives of unknown masses. Inspection of the major metabolites present in a bulk culture of this strain led to the isolation and structure elucidation of a new amphidinol derivative named amphidinol C featuring an unprecedented tetrahydropyran ring between the positions C-7 and C-11. The structure was determined using extensive analyses of NMR and MS data and comparison with data of analogues. The new ring was proposed to stem from a nucleophilic substitution of the sulphate present on the side chain of Amphidinol B. The major metabolites isolated were tested for their antibacterial and antifungal activities and Amphidinol C showed moderate fungicidal activity against yeast and filamentous fungi at 8–16 µg mL⁻¹.     

Molluscicidal saponins from Gundelia tournefortii

From the roots of Gundelia tournefortii seven saponins have been isolated mainly by DCCC. The main saponins (A and B) were characterized, mainly by ¹³C and ¹H NMR spectroscopy, as oleanolic acid 3-O-(2-[α-l-arabinopyranosyl(1 → 3) -β-d-gentiotriosyl(1 → 6) -β-d-glucopyranosyl]gb-d-xylopyranoside) (saponin A) and oleanolic acid 3-O-(2-[α-l-arabinopyranosyl] (1 → 3)-β-d-gentiobiosyl (1 → 6)-β-d-glucopyranosyl β-d-xylopyranoside) (saponin B). The other saponins are also derived from oleanolic acid and contain more sugar units. The saponin mixture and the saponins A and B possess strong molluscicidal activity against the schistosomiasis transmitting snail Biomphalaria glabrata.     

Regioselective synthesis of novel 3-alkoxy (phenyl) thiophosphorylamido-2-(per-O-acetylglycosyl-1′-imino)thiazolidine-4-one derivatives from O-alkyl N-glycosyl(thiosemicarbazido)phosphonothioates

A series of 3-alkoxy(phenyl)thiophosphorylamido-2-(per-O-acetylglycosyl-1′-imino)thiazolidine-4-one derivatives were prepared by the reaction of 1-alkoxy(phenyl)thiophosphoryl-4-(per-O-acetylglycosyl) thiosemicarbazides with ethyl bromoacetate. ¹H/¹³C HMBC measurements corroborated by X-ray crystallographic results revealed the exclusive regioselectivity of these ring closures toward the N-2 position of the thiosemicarbazide moiety. The bioactivity data of 3a-k suggest that the thiazolidine-4-one ring is critical for the herbicidal and fungicidal activities.     

Biosynthesis of tropane ester alkaloids in Datura

Datura meteloides plants were fed via the roots with [1″,2′-¹⁴C]tigloyl hygroline and as a control, [2′-¹⁴C]hygrine. After a week the alkaloids were isolated and degraded. Despite hydrolysis of the putative precursor it was possible, by label ratio, to show that esterification occurs after, and not before, the tropane ring has been synthesized. Hygroline is proposed as a possible intermediate.     

New sweet diterpene glucosides from Stevia rebaudiana

From the leaves of Stevia rebaudiana, two new sweet glucosides, rebaudiosides A and B, were isolated besides the known glucosides, stevioside and steviolbioside. On the basis of IR, MS, ¹H and ¹³C NMR as well as chemical evidences, the structure of rebaudioside B was assigned as 13-O-[β-glucosyl(1-2)-β-glucosyl(1-3)]-β-glucosyl-steviol and rebaudioside A was formulated as its β-glucosyl ester.     

13C NMR spectroscopy of Pyrrolizidine alkaloids

The ¹³C NMR spectra of nine pyrrolizidine alkaloids of the macrocyclic diester type, seven of the corresponding N-oxides and of the parent base retronecine have been recorded and the signals assigned. The 13C NMR signals were found to be sensitive to structural variation in both the diester moiety and the heterocyclic ring system, providing useful information for structural elucidation, particularly when the ¹H NMR spectra may be difficult to interpret.     

Triterpenoids from walsura piscidia

A series of tirucallane (piscidinol A and B) and apotirucallane (piscidinol C–E) derivatives has been isolated from the leaves of Walsura piscidia. The fruit yielded a new tetranortriterpenoid, piscidofuran. The structures were assigned on the basis of ¹H NMR and ¹³C NMR evidence.