Oligonucleotides With Purine Nitrogen-7 as Glycosylation Site

Abstract

The synthesis of phosphoramidites (2 and 3) derived from hypoxanthine and isoguanine N⁷-2¹-deoxyribonucleosides is described. Solid-phase synthesis furnishes oligonucleotides containing N⁷-glycosylated purines. New base pairs between purine N⁷- and N9-nucleosides are proposed.     

Asymmetric Synthesis of Cyclopropyl Carbocyclic Nucleosides

Abstract

A number of nucleosides have been synthesized as potential antiviral and antitumor agents.¹ More recently, various dideoxynucleosides have been synthesized and found to be potent anti-HIV agents.² As a part of our drug discovery program for the treatment of HIV and HBV, we have initiated to synthesize cyclopropyl carbocyclic nucleosides as potential antiviral agents. Several papers regarding the synthesis of cyclopropyl carbocyclic nucleosides have appeared in the literature.^3–5 However, they are all reported as racemic mixtures. In this abstract, we wish to report the asymmetric synthesis of cylopropyl carbocyclic nucleosides from optically active common intermediates, 6 and 11.     

Large Scale Synthesis of the Cap Part in Messenger RNA Using a New Type of Bifunctional Phosphorylating Reagent

Abstract

Bifunctional phosphorylating reagents 1 and 2 were employed for the synthesis of the cap part, m⁷G⁷ pppG, from guanosine 5′-phosphates on a large scale without any protecting groups.     

Selective Metalation of 6-Methylpurines: Synthesis of 6-Fluoromethylpurines and Related Nucleosides

Abstract

A selective metalation at the 6-CH3 over C-8 of 6-methylpurine derivative 6 was observed with softer counter cation (Na⁺ or K⁺) of the base, while the harder Li⁺ showed no selectivity. In the presence of N-fluorobenzenesulfonamide (NFSI), this property was utilized for the synthesis of 6-fluoromethylpurine derivatives 4 and 5 as potential toxins for suicide gene therapy.     

The Synthesis Of Epr Differentiable Spinlabels And Their Coupling To Uridine

For EPR measurements of RNA, DNA, or proteins, the occurrence of the paramagnetic species is necessary. The aim of this work is to improve the synthesis of two different EPR spinlabels 2,2,6,6-tetra methyl-3,4-dehydro-piperidin-N-oxyl-4-acetylene (TEMPA) 6 and ¹⁵N-labeled TEMPA 6* and their coupling to uridine. The yield of the synthesis of TEMPA could be increased to 40% and the second nitroxide 2,2,6,6-tetramethyl-3,4-dehydro-piperidin-¹⁵N-oxyl-4-acetylene 6* could be synthesized with a yield of 11%.     

An Improved Post-Synthetic Substitution Approach for Synthesis of Oligodeoxynucleotides Containing Labile 4-Substituted Thymines

Abstract

A simple procedure is described for the preparation of a versatile oligodeoxynucleotide which contains 4-phenylthiothymidine. This versatile oligomer has been successfully used for synthesis of oligonucleotides containing labile 5-methyl-N⁴, N⁴-ethanocytosine (7) or 4-azido-5-methyl-2-pyrimidinone-1-β-(2′-deoxyriboside) (8).     

Analogues of both Leu- and Met-enkephalin containing a constrained dipeptide isostere prepared from a Baylis-Hillman adduct

An efficient route was developed for the synthesis of the Fmoc-protected dipeptide 4, isostere of Gly-Gly containing an α-methylene β-amino acid; the conformationally restricted analogues of Leu-enkephalin, 3a, and Met-enkephalin, 3b, respectively, were prepared by changing 4 for Gly²-Gly³ in the native compounds 3a and 3b whose biological activities were significantly lower than the parent compounds.     

Novel Phytotoxins Produced by the Causal Fungus of the Shoot Blight of Larches

Theaspirane has been found as a naturally occurring substance in raspberry, yellow passion fruit and tea.¹⁾ The synthesis of theaspirane has been reported by some investigators.²⁾ We now report a new synthesis of theaspirane from β-ionone through dihydro-β-ionol.

When two equivalents of aluminium chloride hexahyd-rate (A1C1₃-6H₂0) is present in sodium-ammonia reduction, β-ionone (1) can be efficiently reduced to dihydro-β-iaonol (2). The bromination of 2 using cupric bromide, followed by dehydrobromination in the presence of calcium carbonate, affords a mixture of (E)-theaspirane and (Z)-theaspirane. The process of synthesis is outlined in Scheme 1.     

A Convenient Method for the Synthesis of 2-(β-D-Glycopyranosylthio) Pyridines

Abstract

Treatment of piperidinium salts of dihydropyridinethiolates 3 with glycosyl bromides 4 in dry acetone provides a convenient and high yielding synthesis of 1,4-dihydro-3-cyanopyridine thioglycosides 5. The structures of 5 were confirmed by oxidation as well as by ¹H NMR and ¹³C NMR spectral analysis.     

Synthesis of 3, N4-Dimethylcytidine

Abstract

Two procedures are described for the synthesis of 3, N⁴-dimethylcytidine, a compound usually obtained in only trace quantities.     

Synthesis of O2- and O4-Ethylthymidine 5'-Triphosphates

Abstract

This paper describes the microscale synthesis of O² - and O⁴ -ethylthymidine 5'-triphosphates.     

HM-chromanone,a component of Portulaca oleracea L., stimulates glucose uptake and glycogen synthesis in skeletal muscle cell

BackgroundDiabetes mellitus is a chronic metabolic disease characterized by increased blood glucose levels. In order to lower blood glucose, it is important to stimulate glucose uptake and glycogen synthesis in the muscle. (E)-5-hydroxy-7-methoxy-3-(2′-hydroxybenzyl)-4-chromanone (HM-chromanone), a constituent isolated from Portulaca oleracea L., exhibits anti-diabetic effects; however, its mechanisms are not yet clearly understood on glucose uptake and glycogen synthesis in muscle cells.PurposeIn the present study, we examined the effects of HM-chromanone on glucose uptake into L6 skeletal muscle cells and elucidated the underlying mechanisms.MethodsThe effects of HM-chromanone on glucose uptake into L6 skeletal muscle cells were assessed by 2-Deoxyglucose uptake assay. Western blot analysis was carried out to elucidate the underlying molecular mechanisms.ResultsWe found that HM-chromanone promoted glucose uptake into L6 skeletal muscle cells in a dose-dependent manner. Moreover, HM-chromanone induced the phosphorylation of IRS-1^Tyr612 and AKT^Ser473, and the activation of PI3K. HM-chromanone also stimulated the phosphorylation of AMPK^Thr172, AS160^Thr642, TBC1D1^Ser237, and ACC via the CaMKKβ pathway. Furthermore, HM-chromanone increased glycogen synthesis through the inactivation of glycogen synthase kinase 3 α/β.ConclusionThe results of this study indicate that HM-chromanone stimulates glucose uptake through the activation of the PI3K/AKT and CaMKKβ-AMPK pathways and glycogen synthesis via the GSK3 α/β pathway in L6 skeletal muscle cells.     

Preparation of an unprotected phosphotyrosine building block and its application in solid-phase synthesis of phosphopeptides

Summary A new and facile synthesis of tyrosine phosphorylated peptides has been developed.N ^α-Fmoc-Tyr(tBu)-OPfp was treated with TFA, phosphorylated with phosphorous oxychloride and the resulting phosphoric acid dichloride was hydrolysed to giveN ^α-Fmoc-Tyr(PO₃H₂)-OPfp1 in an overall yield of 98%. Compound1 was used in solid-phase peptide synthesis of phosphopeptides2, 3 and4, which are fragments of murine adipocyte lipid binding protein. The advantage of using the Pfp ester was the absence of pyrophosphates and other byproducts.     

REGIOSELECTIVE SYNTHESIS OF 1,3,5-13C3 AND 2,4-13C2-LABELED 2-DEOXYRIBONOLACTONES

The synthesis of 1,3,5-¹³C₃- and 2,4-¹³C₂-labeled 5-O-bromobenzyl-2-deoxyribonolactones 2, precursors to ¹³C-enriched nucleoside phosphoramidites for solid-phase synthesis of DNA oligonucletides, is described. An equimolar combination of these two multiply labeled lactones affords a “population-labeled” mixture of isotopomers which exhibits an approximately 50-fold increase in the sensitivity of ¹³C-NMR compared to natural abundance measurements. The ¹³C-¹³C 2-bond and 4-bond coupling constants are reported for the lactones; all are < 2 Hz, confirming that this labeling scheme should be especially useful for NMR-relaxation measurements.     

Ultrafast Cleavage and Deprotection of Oligonucleotides Synthesis and Use of CAc Derivatives

Abstract

We have investigated the use of alkylamines as fast cleavage and deprotection reagents for the solid phase synthesis of oligonucleotides and found methylamine/ammonium hydroxide (or methylamine) as an efficient reagent. The transamination side product formed with the commonly used dC^bz has been eliminated by the use of dC^Ac phosphoramidite. This system has successfully been used in the synthesis of oligonucleotides and oligonucleoside phosphorothioates. DMT dC^Ac hydrogen phosphonate and DMT ribo C^Ac-2′-O Me phosphoramidite also have been prepared and used in the synthesis of oligonucleotides.     

马利亚霉菌(Mariannaeasp.) HJ合成金属硒化物及机理研究

[背景] 金属硒化物因其优异的光电和催化特性,近年来在半导体、电化学及抗癌等领域成为了研究热点。相较于传统的化学还原法,生物合成金属硒化物具有环境友好、耗能较低等优势。然而,目前有关生物合成金属硒化合物的微生物资源较少且相关合成机理尚不明晰。[目的] 利用马利亚霉菌（Mariannaea sp.） HJ合成了3种金属硒化物并对其合成机理进行了初步探索。[方法] 利用X射线衍射（X-Ray Diffraction,XRD）和傅里叶转换红外线光谱（Fourier Transform Infrared Spectroscopy,FTIR）对菌株HJ合成的金属硒化物进行了初步的表征,考察了纳米材料合成过程中总巯基含量、总抗氧化性能及自由基含量变化,并且验证了转运蛋白DMT1在金属硒化物合成中所起的关键性作用。[结果] XRD结果表明菌株HJ能够在Bi³⁺、Pb²⁺、Co²⁺与SeO₃^2-作用下分别合成Bi₄Se₃、PbSe和CoSe₂纳米颗粒,其合成的最优pH条件分别为6.0、7.0、8.0。FTIR结果表明,合成的金属硒化物表面含有氨基、羧基、羟基等官能团。3种金属硒化物的合成反应体系与空白对照组相比,总巯基含量明显下降,而总抗氧化性能却有所提高,这表明巯基等酶促体系或氨基酸金属蛋白类的非酶促体系可能参与了SeO₃^2-的还原过程。苄基异硫脲盐酸盐屏蔽实验表明,转运蛋白DMT1在SeO₃^2-转运和金属硒化物分泌过程中起到关键作用。此外,Bi³⁺、Pb²⁺和Co²⁺的加入使得菌株HJ产生氧化应激反应,在胞外分泌了大量的过氧化氢、羟基自由基和超氧自由基,而上述自由基可通过诱导热激效应的方式增强金属离子或纳米颗粒的转运过程。[结论] 利用马利亚霉菌（Mariannaeasp.） HJ合成了Bi₄Se₃、PbSe和CoSe₂纳米颗粒,为研究金属硒化物的生物合成及机理提供了一定的理论参考。     

Synthesis,quality control and determination of metallic impurities in 18F-fludeoxyglucose production process

AimThe aim of this study was to synthesize ¹⁸FDG in some consecutive runs and check the quality of manufactured radiopharmaceuticals and to determine the distribution of metallic impurities in the synthesis process.BackgroundFor radiopharmaceuticals the general requirements are listed in European Pharmacopeia and these parameters have to be checked before application for human use.Materials and methodsStandard methods for the determination of basic characteristics of radiopharmaceuticals were used. Additionally, high resolution γ spectrometry was used for the assessment of nuclidic purity and inductively coupled plasma with mass spectrometry to evaluate metallic content.ResultsResults showed sources and distribution of metallic and radiometallic impurities in the production process. Main part is trapped in the initial separation column of the synthesis unit and is not distributed to the final product in significant amounts.ConclusionsProduced ¹⁸FDG filled requirements of Ph.Eur. and the content of radionuclidic and metallic impurities was in the acceptable range.     

A Simple and Regioselective Synthesis of 13C-Methyl-Labeled Thymedine

Abstract

A convenient and efficient procedure for the synthesis of ¹³C methyl-labeled thymidine by way of lithiation of t-butyldimethylsilyl protected 2′-deoxyuridine is described.     

Synthesis of 2′-Deoxy[5′-13C]Ribonucleotides and HMQC-Noesy NMR Study of the Dickerson's Dodecamer with 13C-Labeling at the 5′ Positions

Abstract

In addition to the synthesis of 2′-deoxy[5′-¹³C]ribonucleosides (6) via the D-[5-¹³C]ribose derivative (4), the construction of the corresponding dodecanucleotide with the Dickerson's sequence and its HMQC-NOESY NMR analysis are described.     

Synthesis,characterization and biological evaluation of C5′-N-cyclopropylcarboxamido-C6-amino-C2-alkynylated purine nucleoside analogues

In an effort to develop potent antibacterial and anticancer agents, a series of C5′-N-cyclopropylcarboxamido-C6-amino-C2-alkynylated purine nucleoside analogues 11a-g were synthesized through a Sonogashira cross-coupling reaction. The nine-step synthesis is easy to perform, and employs commercially available reagents. 2-Iodo-5′-N-cyclopropylcarboxamidoadenosine (9) was used as the starting intermediate for the synthesis of title derivatives 11a-g. Synthetic intermediates (2–9) and final products (11a-g) were appropriately characterized by IR, ¹H NMR, ¹³C NMR and mass spectroscopy. The synthesized purine nucleoside analogues (11a-g) were evaluated for their in vitro antibacterial activity against two gram-positive and two gram-negative bacteria. They were then tested for cytotoxicity against MDA-MB-231 and Caco-2 cancer cell lines to determine their anti-cancer activity. Among the tested compounds, compounds 11c and 11g showed most potent antibacterial activity against S.aureus and P.aeruginosa bacterial strains. Compounds 11b and 11e displayed considerable IC₅₀^s of 7.9 and 6.8 µg/mL, respectively, vs MDA-MB-231 cell lines of 7.5 and 8.3 µg/mL, respectively, against the Caco-2 cell lines.