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1.
Abstract The synthesis of phosphoramidites (2 and 3) derived from hypoxanthine and isoguanine N7-21-deoxyribonucleosides is described. Solid-phase synthesis furnishes oligonucleotides containing N7-glycosylated purines. New base pairs between purine N7- and N9-nucleosides are proposed. 相似文献
2.
3.
《Nucleosides, nucleotides & nucleic acids》2013,32(4-7):1279-1282
The 9-deazaguanine N7-2′-deoxyribofuranoside (3) as well as the bromo and iodo derivatives 4a,b were synthesized and incorporated in oligonculeotide duplexes and triplexes. Their base pairing properties were investigated and compared with those of the parent purine N7-2′-deoxyribofuanosides. 相似文献
4.
Stereoselective synthesis of antiviral synguanol (1) is described. Reaction of 6-benzyloxy-2-(dimethylaminomethyleneamino)purine (10) with ethyl (cis,trans)-2-chloro-2-(chloromethyl) cyclopropane-1-carboxylate (2c) under the conditions of alkylation-elimination gave (Z)-6- benzyloxy-2-formylamino-9-[(2-carbethoxycyclopropylidene)methyl]purine (11) but no E,N9-isomer. Minor amounts of (Z)-6-benzyloxy-2-formylamino-7-[(2-carbethoxy-cyclopropylidene)methyl]purine (13) were also obtained. Hydrolysis of compounds 11 and 13 in 80% acetic acid afforded (Z)-9-[2-(carbethoxycyclopropylidene)methyl]guanine (14) and (Z)-7-[2-(carbethoxy- cyclopropylidene)methyl]guanine (15). Reduction of 14 furnished synguanol (1). Reaction of N4-acetylcytosine (7) with ester 2c led to (Z,E)-1-(2-carbethoxycyclopropropylidenemethyl)cytosine (8, Z/E ratio 6.1:1). Basicity of purine base, lower reactivity of alkylation intermediates as well as interaction of the purine N3 or cytosine O2 atoms with the carbonyl group of ester moiety seem to be essential for the observed high stereoselectivity of the alkylation-elimination. The Z-selectivity is interpreted in terms of E1cB mechanism leading to a transitory “cyclic” cyclopropenes which undergo a cyclopropene-methylenecyclopropane rearrangement. 相似文献
5.
Aimée St. Clair Guobing Xiang Larry W. McLaughlin 《Nucleosides, nucleotides & nucleic acids》2013,32(5):925-937
Abstract A chiral acyclic nucleoside, one in which the ribose carbohydrate has been replaced with a glycerol-based linker, is prepared by glycosylating guanine at the N7-nitrogen. The stereochemically pure derivative is converted to a DMT-protected phosphoramidite for incorporation into DNA sequences. Sequence containing the acyclic N7-dG nucleoside are capable of forming DNA triplexes in which it is likely that the N1-H and N2-amino groups of the N7-dG are involved in recognition of the guanine base in G-C base pairs. 相似文献
6.
Wajdi Michel Zoghaib Shajan Mannala V. Sagar Gupta Guy Tourigny 《Nucleosides, nucleotides & nucleic acids》2013,32(4):364-376
Analogs of (E)-5-(2-bromovinyl)-2 ′-deoxycytidine (BrVdCyd) (1) by substitution at N4 were synthesized to impart resistance against deamination. The anti-HSV-1 activity and solution conformation of these analogs were determined. N4-Acetyl-BrVdCyd (2) was a potent inhibitor of HSV-1 replication whereas N4-propanoyl-BrVdCyd (3) had good activity and N4-Butanoyl-BrVdCyd (4) had only low activity against HSV-1 replication. N4-Methyl-BrVdCyd (5) was devoid of activity against HSV-1. 相似文献
7.
Treatment of neuropeptide Y (NPY,1) for 20 hr with a 20 equivalent excess of N-propionyl succinimide (2) in 10 mM phosphate buffer,pH 6.0, yields NPY and N-propionyl-NPY (3) as major products, and atpH 7.5 the major product is N, N-dipropionyl-NPY. However, acylation of NPY with one equivalent of N-(5-azido-2-nitrobenzolyloxy)-succinimide (5) is more rapid, yielding N-(5-azido-2-nitrobenzoyl)-NPY (6) in 70% conversion yield after only 5 min. Thus, in spite of its increased reactivity, the N-hydroxysuccinimide active ester shows enhanced- vs.-NH2 selectivity relative to2. The activities of3, 4, and6 as reversible, competitive ligands at rat brain NPY binding sites and of6 as an irreversible photoaffinity label are reported.Abbreviations used NPY
neuropeptide Y
- PYY
peptide YY
- DNFB
dinitrofluorobenzene
- DNP
dinitrophenyl
- LAPase
leucine aminopeptidase m
- HPLC
high-performance liquid chromatography
- RT
retention time
- FAB+MS
positive fast atom bombardment mass spectrometry
Taken in part from the Ph.D. dissertation of Longqin Hu, The University of Kansas, 1993. 相似文献
8.
Yoshimitsu Yamazaki Hideo Suzuki Akira Kamibayashi Naoharu Watanabe Nobutaka Takahashi 《Bioscience, biotechnology, and biochemistry》2013,77(9):1945-1950
Five new derivatives of adenosine, N6-[(1-methylethyl)thiomethyl]-(1), N6-methyithiomethyl-(2), N6-phenylthiomethyl-(3), N6-[(3-amino-3-carboxypropyl)thiomethyl]-(4), and N6-[(2-amino-2-carboxyethyl)thiomethyl]adenosine (5), were synthesized and their cytokinin activity was tested in the Amaranthus betacyanin assay and the soybean callus growth.1, 2, and 3 were active in the former assay and all five compounds were active in the latter assay. The activities of the compounds were, however, weaker than those of the reference derivatives, in which Sulfides were replaced by methylenes, N6-isopentyl-, N6-n-propyl-, N6-benzyl-, and N6-(5-amino-5-carboxypentyl)adenosine. This fact indicates that the sulfide structure introduced into the N6-side chains had the effect of reducing cytokinin activity. 相似文献
9.
《Nucleosides, nucleotides & nucleic acids》2013,32(5-8):1235-1237
Abstract The H-phosphonate and the phosphoramidite of N7-2′-deoxyisoguanosine (2) were prepared and incorporated into oligonucleotide duplexes. Their base pairing properties were investigated and compared with those of the parent purine nucleosides. 相似文献
10.
The chiroptical properties of the cyclic dipeptides cyclo-L -alanyl-L -histidine and cyclo-L -histidinyl-L -histidine have been investigated as a function of molecular conformation. The rotatory strengths of the n-π* transitions of the peptide chromophores and the lowest energy π-π* transitions of the imidazole chromophores have been calculated as a function of the angle of fold of the cyclic dipeptide group and the dihedral angles χ1 and χ2 of the amino acid side chains. The results of this investigation are consistent with the preferred position of the dihedral angle χ1 occurring near 60° in the free base form of cyclo-L -alanyl-L -histidine, and near 180° when the imidazole side chain is protonated. Furthermore, in the case of the free base form of the imidazole group, it is possible that the tautomeric isomer in which Nε is protonated may be more prevalent than the isomer in which Nδ is protonated. 相似文献
11.
《Nucleosides, nucleotides & nucleic acids》2013,32(4-7):577-585
The 8-aza-7-deazaadenine (pyrazolo[3,4-d]pyrimidin-4-amine) N8-(2′-deoxy-ribonucleoside) (2) and the 7-deazaguanine (pyrrolo[3,4-d]pyrimidine-2-amin-(3H)-4-one) C8-(2′-deoxyribonucleoside) (4) were synthesized and incorporated in oligonucleotides employing phosphoramidite chemistry. Oligonucleotides carrying compound 2 are able to form base pairs with the four canonical DNA constituents without significant structural discrimination. The nucleoside 4 was obtained from the corresponding ribonucleoside by deoxygenation. Oligonucleotides containing compound 4 showed similar base pairing properties as those with 2′-deoxyisoguanosine. 相似文献
12.
Shib P. Dutta Ralph J. Bernacki Alexander Bloch Girish B. Chheda 《Nucleosides, nucleotides & nucleic acids》2013,32(2):151-162
Abstract N 6 ?(1-hydroxyguanidino)purine IIa, and its 9-β-D-ribonucleoside derivative IIb were prepared by reacting at room temperature 6-hydroxyadenine Ia and 6-hydroxyadenosine Ib, with 1-guanyl-3,5-dimethylpyrazole nitrate in DMF. Refluxing IIa and IIb in 95% ethanol gave N6?(1-hydroxyureido)purine and its ribonucleoside derivative respectively; the latter compound was also obtained by refluxing Ib with 1-guanyl-3,5-dimethylpyrazole nitrate in ethanol. The two base analogs were inactive against L1210 cells in vitro, but the nucleoside derivatives inhibited the growth of these cells by 50% at 5 × 10 -6 and 6 × 10?7 M respectively. Compound IIb, at 200 mg/kg/day × 5, increased the life span of L1210-bearing DBA/2N mice by 57%. Cytofluorometric determinations showed that IIb inhibited cell growth in the G2 phase of the cell cycle. also found to inhibit adenosine deaminase activity with a Ki = 3.47 μM. 相似文献
13.
Stéphane P. Vincent Charles Mioskowski Luc Lebean 《Nucleosides, nucleotides & nucleic acids》2013,32(9):2127-2139
Abstract Under Mitsunobu reaction conditions or in the presence of eiectrophilic alkylating reagents, alkylation of guanosine derivatives protected by an N,N-dialkyl amidine at the exocyclic amino group occurs selectively on nitrogen N 1 of the purine base. 相似文献
14.
Yuji Sumita Michiyo Shirato Yoshihito Ueno Akira Matsuda Satoshi Shuto 《Nucleosides, nucleotides & nucleic acids》2013,32(1-2):175-187
Abstract The synthesis of cyclic ADP-carbocyclic-ribose (2), as a stable mimic for cyclic ADP-ribose, was investigated. Construction of the 18-membered backbone structure was successfully achieved by condensation of the two phosphate groups of 19, possibly due to restriction of the conformation of the substrate in a syn-form using an 8-chloro substituent at the adenine moiety. SN2 reactions between an optically active carbocyclic unit 8, which was constructed by a previously developed method, and 8-bromo-N 6-trichloroacetyl-2′,3′-O-isopropylideneadenosine 9c gave N-1-carbocyclic derivative, which was deprotected to give 5′,5′-diol derivatives 18. When 18 was treated with POCl3 in PO(OEt)3, the bromo group at the 8-position was replaced to give N-1-carbocyclic-8-chloroadenosine 5′,5′-diphosphate derivative 19 in 43% yield. Treatment of 19 with 1-(3-dimethylaminopropyl)-3-ethylcarbodiimide hydrochloride gave the desired intramolecular condensation product 20 in 10% yield. This is the first chemical construction of the 18-membered backbone structure containing an intramolecular pyrophosphate linkage of a cADPR-related compound with an adenine base. 相似文献
15.
Interaction of (2′ -5′) and (3′ -5′) Linked 2-Aminoadenylyl-3-aminoadenosines with Polyuridylic Acid
Masako Muraoka Seizo Takahashi Seiichi Uesugi 《Nucleosides, nucleotides & nucleic acids》2013,32(7):1503-1518
Abstract 2′-5′ and 3′-5′ linked 2-aminoadenylyl-2-aminoadenosines [(2′-5′)n2Apn2A (1) and (3′-5′)n2Apn2A (2)] were synthesized by condensation of 5′-O-monomethoxytrityl-N 2 N 6-dibenzoyl-2-aminoadenosine and N 2,N 6,2′,3′-O-tetrabenzoyl-2-aminoadenosine 5′-phosphate using dicyclohexylcarbodiimide (DCC). The conformational properties of these dimers 1 and 2 were examined by UV, NMR and CD spectroscopy. The results reveal that the 2′-5′-isomer 1 takes a stacked conformation, which contains a larger base-base overlap and is more stable against thermal perturbation with respect to the 3′-5′-isomer 2. Interactions of 1 and 2 with polyuridylic acid (Poly (U)) were also examined by Tm, mixing curves, UV and CD spectra. Both the dinucleoside isomers 1 and 2 formed a complex of 1 : 2 stoichiometry with poly(U), which was much more stable than that of the corresponding ApA isomer 相似文献
16.
《Nucleosides, nucleotides & nucleic acids》2013,32(5-8):755-758
Abstract A method for the selective introduction of the N2-(dimethylamino)methylene group into 8-thio-9-(2-hydroxyethoxymethyl)guanine (1) has been developed. The effect of the N2-amidine protection on the S-alkylation of 1 was studied. 相似文献
17.
P. Franchetti L. Messini L. Cappellacci G. Abu Sheikha M. Grifantini P. Guarracino 《Nucleosides, nucleotides & nucleic acids》2013,32(8):1739-1755
Abstract 2′,3′-Dideoxy-8-aza-1-deazaadenosine (21) and its α-anomer (20) were synthesized via glycosylation of 7-chloro-3H-1,2,3-triazolo[4,5-b]pyridi-ne with 2,3-dideoxy-5-O-[(1, 1)-dimethylethyl)diphenylsilyl]-D-glycero-o-pen-tofuranosyl chloride. The reaction gave a mixture of α- and β-anomers of N3-, N4- and N1-glycosylated regioisorners (12–15). The α- and β-anomers of the N4-glycosylated isomer 26 and 27 were also synthesized through the glycosylation of 8-aza-1-deazaadenine with 1-acetoxy-2,3-dideoxy-5-O-f(1,1-di-methylethyl)dimethylsilyl]-D-glycero-pentouranose. These dideoxynucleo-sides and a series of previously synthesized 8-aza-1-deazapurine nucleosidcs were tested for activity against several DNA and RNA viruses, HIV-1 included. The α- and β-anomers of 7-chloro-3-(2-deoxy-D-erythro-pentofuranosyl)-3H-1,2,3-triazolo[4,5-b]pyridine (3a and 4) showed activities against Sb-1 and Coxs viruses. The α- and β-anomers of 2′,3′-dideoxy-8-aza-1-deazaadenosine (20 and 21) were found active as inhibitors of adenosine deaminase. 相似文献
18.
Keiichi Aritomo Chihiro Urashima Takeshi Wada Mitsuo Sekine 《Nucleosides, nucleotides & nucleic acids》2013,32(1-3):1-16
Abstract Reaction of 2′,3′,5′-O-silylated inosine derivative 1 with 2, 3-O-isopropylidene-5-O-tritylribosyl chloride (3) in a two-phase (CH2Cl2-aq. NaOH) system in the presence of Bu4NBr gave three products, i. e., 6-O-α-, 6-O-β-, and N 1-β-isomers of glycosides 4, 5a, and 5b. A similar PTC reaction of 1 with 2, 3, 5-tri-O-benzylribosyl bromide (9) gave four regio- and stereo-isomers involving the N1-β-glycoside 10. Reaction of 1 with 2, 3, 5-tri-O-benzoylribosyl bromide (11) afforded three products involving the desired N1-β-glycoside 12b, which could be deprotected to give N 1-ribosylinosine (15b) as a useful intermediate for the synthesis of cIDPR. 相似文献
19.
Frank Seela Matthias Zulauf Georg Becher 《Nucleosides, nucleotides & nucleic acids》2013,32(3):305-314
Abstract The anion-glycosylation (KOH, MeCN, TDA-1) of 3-bromopyrazolo[3,4-d]-pyrimidines 4a and 4b with 2-deoxy-3,5-di-O-(p-toluoyl)-α-D-erythro-pentofuranosyl chloride (5) furnishes the regioisomeric N′-β-D-2′-deoxyribonucleosides 6a and 6b together with the dehalogenated N2-regioisomers 8a and 8b, stereoselectively. The dehalogenation takes place after the glycosylation and results from the sensitivity of the N-2 nucleosides toward aqueous base. An addition/elimination mechanism is suggested for the dehalogenation reaction. 相似文献
20.
Nancy Guzzo-Pernell Geoff W Tregear Jim Haralambidis John M Lawlor 《Nucleosides, nucleotides & nucleic acids》2013,32(7):1191-1207
Abstract Three modified nucleosides were designed with the aim of achieving triplet formation with the CG base pair of duplex DNA. Direct anthraniloylation of 2′-deoxycytidine, using isatoic anhydride, afforded the novel N 4-anthraniloyl-2′-deoxycytidine. Much improved preparations of N 4-carbamoyl-2′-deoxycytidine and of N 4-ureidocarbonyl-2′-deoxycytidine were accomplished. The modified nucleosides were incorporated into oligonucleotides. Thermal denaturation studies and gel mobility shift analysis suggest that these nucleosides do not form base triplets with any of the four base pairs of DNA. 相似文献