Review of the Dual-Clock Control of Tidal Rhythms and the Hypothesis that the Same Clock Governs Both Circatidal and Circadian Rhythms

Discoveries first published in 1986 did not fit the de rigueur working hypothesis that the clocks governing tide-associated rhythms had a fundamental period of 12.4 h, a value equal to the average interval between successive tides on most coastlines of the world. To explain the results a dual-clock schema was fashioned that envisioned two clocks, strongly coupled together 180° antiphase, each running at a basic rate of 24.8 h (the interval of a lunar day), as the driving agents of tide-associated rhythms (details are given in the text). This elaboration has been named the circalunidian-clock hypothesis, a hypocorism used in some armchair ruminations back in 1973. In the decade since 1986, a goodly amount of evidence has been garnered that is consistent with this hypothesis—suggesting that first-call divination appears to have been visionary. Acceptance of this hypothesis leads to further cerebration that a 24.8-h clock, its circa periods in constant conditions, and other properties—which fully overlap with our perception of the circadian clock that drives daily rhythms—may indicate that circadian and circalunidan timepieces are not different entities. The known properties of both daily and lunar clock-types are compared and contrasted, and, with the exception of one feature (for which there is at least a philosophical explanation), it is concluded that the same clock that drives tidal rhythms could also motor daily rhythms, i.e., there may be no such thing as a 12.4-h horologue.     

Bibliometrical study method on tidal freshwater marshes loss and research orientation

Many studies concerning wetland loss have been conducted in the last two decades. However, tidal freshwater marsh’s research topics, mirroring hot points, vary in scientific community and change over time. A bibliometrical analysis method is demonstrated in this paper to describe tidal freshwater marsh research and changes in the research over time. For example, habitat restoration, soil composition, plantation pattern and coastal wetland have drawn increasing attention since 2005. The bibliographic methods described in this paper involved the use of 54 case studies to find critical paths regarding how tidal freshwater wetland loss has been induced by different causes. From case studies, it has been concluded that urbanization is the most important cause of tidal freshwater marsh loss. Critical paths of tidal freshwater marsh loss driving forces have been also demonstrated in this paper.     

Review of the Dual-Clock Control of Tidal Rhythms and the Hypothesis that the Same Clock Governs Both Circatidal and Circadian Rhythms

Discoveries first published in 1986 did not fit the de rigueur working hypothesis that the clocks governing tide-associated rhythms had a fundamental period of 12.4 h, a value equal to the average interval between successive tides on most coastlines of the world. To explain the results a dual-clock schema was fashioned that envisioned two clocks, strongly coupled together 180° antiphase, each running at a basic rate of 24.8 h (the interval of a lunar day), as the driving agents of tide-associated rhythms (details are given in the text). This elaboration has been named the circalunidian-clock hypothesis, a hypocorism used in some armchair ruminations back in 1973. In the decade since 1986, a goodly amount of evidence has been garnered that is consistent with this hypothesis—suggesting that first-call divination appears to have been visionary. Acceptance of this hypothesis leads to further cerebration that a 24.8-h clock, its circa periods in constant conditions, and other properties—which fully overlap with our perception of the circadian clock that drives daily rhythms—may indicate that circadian and circalunidan timepieces are not different entities. The known properties of both daily and lunar clock-types are compared and contrasted, and, with the exception of one feature (for which there is at least a philosophical explanation), it is concluded that the same clock that drives tidal rhythms could also motor daily rhythms, i.e., there may be no such thing as a 12.4-h horologue.     

Fluxes of bacterioplankton between a tidal estuary and the sea: returning to the “Outwelling Hypothesis”

The tidal dynamics of bacterioplankton communities at the outer part ofa shallow estuary (Ria de Aveiro, Portugal) were studied during 6 tidal cyclesat a fixed sampling site. Bacterial numbers (0.2–8.1 ×10⁹ cells l^–1), aminopeptidase activity(189–1662 nmol l^–1 h^–1),-glucosidase activity (1.7–67.0 nmoll^–1 h^–1) and potential glucoseincorporation (0.48–3.99 nmoll^–1 h^–1) followed a consistent patternof increase during ebb and decrease during flood.Fluxes of bacterioplankton populations and associated heterotrophic activitiesbetween the estuary and the coastal area during a tidal cycle were estimatedfrom the water flux as derived from a two-dimensional vertically-integratednumerical model. The net fluxes estimated for a tidal cycle ranged from–26.0 to –2.5 to × 10¹⁶ bacterial cells. The nettidal fluxes of potential heterotrophic activities ranged from –10 to–80 mol h^–1 for aminopeptidase, –0.33to –1.10 mol h^–1 for -glucosidase and–0.18 to +0.03 mol h^–1 for glucoseincorporation. Net fluxes were generally negative in sign indicating thetransfer of phyto- and bacterioplankton, as well as potential capacities for thedegradation and recycling of organic matter, from the outer estuarinecompartment to the sea.     

Predation on barnacles of intertidal and subtidal mussel beds in the Wadden Sea

Balanids are the numerically dominant epibionts on mussel beds in the Wadden Sea. Near the island of Sylt (German Bight, North Sea), Semibalanus balanoides dominated intertidally and Balanus crenatus subtidally. Field experiments were conducted to test the effects of predation on the density of barnacle recruits. Subtidally, predator exclusion resulted in significantly increased abundances of B. crenatus, while predator exclusion had no significant effects on the density of S. balanoides intertidally. It is suggested that recruitment of B. crenatus to subtidal mussel beds is strongly affected by adult shore crabs (Carcinus maenas) and juvenile starfish (Asterias rubens), whereas recruits of S. balanoides in the intertidal zone are mainly influenced by grazing and bulldozing of the very abundant periwinkle Littorina littorea, which is rare subtidally. Thus, not only do the barnacle species differ between intertidal and subtidal mussel beds, but the biotic control factors do so as well. Electronic Publication     

Habitat use and growth of age-0 whitefish,Coregonus lavaretus,and cisco,C. albula

Synopsis Local American eel stocks were studied by mark-recapture methods along 600m of tidal creeks in Great Sippewisset Marsh, Falmouth, Massachusetts, during summer 1979. The estimated stock density was 350 eels, equivalent to 875 fish ha^-1, and movement of individual American eels over the five week study was usually less than 100 m. Large American eels were found to predominate in the wide marsh creeks whereas smaller American eels predominated in narrower creeks at the landward side of the marsh. Territoriality is suggested as a mechanism for maintaining differences in distribution of size classes and a limited home range.Senior author     

Subtidal and intertidal mussel beds (Mytilus edulis L.) in the Wadden Sea: diversity differences of associated epifauna

In 1997 and 1998, surveys were performed to compare species composition, abundance and diversity of non-attached epifauna (>1 mm) in low intertidal and adjacent shallow subtidal zones of three mussel beds (Mytilus edulis L.) near the island of Sylt in the North Sea. The community structure was similar when compared within tidal zones: no significant differences in species numbers and abundances were recorded between locations and between years. A comparison between tidal zones, however, revealed higher diversity, species densities and total species numbers in the subtidal (per 1,000 cm²: H ′=2.0±0.16; 12 ±1 species density; 22 species) than the intertidal zone (per 1,000 cm²: H ′=0.7±0.27; 6±2 species density; 19 species). Abundances significantly dropped with increasing submergence from 2,052 (±468) m^–2 to 1,184 (±475) m^–2. This was mainly due to significantly higher densities of both juvenile periwinkles, Littorina littorea, and crabs, Carcinus maenas, in intertidal mussel beds. However, many less dominant species were significantly more abundant in subtidal mussel beds. This study revealed that in the non-attached epifaunal community of mussel beds the tidal level effect within metres was strong, whilst the spatial variability in a much wider (kilometre) range but the same tidal level was negligible. The high epifaunal diversity in the subtidal zone suggests that the protective measures for mussel beds against the effects of mussel fishery should be extended from the intertidal to the subtidal zone, if the integrity of the mussel bed community in the Wadden Sea National Park is to be maintained. Electronic Publication     

Laboratory spawning cues in Menidia beryllina,and M. peninsulae (Pisces,Atherinidae) with notes on survival and growth of larvae at different salinities

Synopsis Spawning patterns of inland silversides, Menidia beryllina, and tidewater silversides, Menidia peninsulae, were examined in the laboratory under several combinations of ‘tidal’ and diel light cycle cues. M. beryllina showed a high frequency of spawning throughout the day when held under constant conditions (24L: OD, current velocity 8 cm sec⁻¹) and when ‘tidal’ and diel light cycles were presented singly or in combination. In contrast, M. peninsulae demonstrated a high frequency of spawning only when presented a combination of ‘tidal’ and diel light cycle cues and spawned predominantly at night. Menidia beryllina embryos were euryhaline. Hatching ranged from 73 to 78% at salinities of 5,15 and 30‰ M. peninsulae embryos showed an inverse relationship between the percentage hatch and the incubation salinity, 90% at 5‰ and only 65% at 30‰ Survival and growth of larval M. beryllina from the day of hatching through 16 days old was optimal at 15‰ Although survival of M. peninsulae larvae was optimal at 30%, no trend was apparent in growth of larvae held for 16 days at 5, 15 or 30‰ salinity. Contribution No. 508 from the Gulf Breeze Environmental Research Laboratory     

Ichnodiversity and ichnodisparity: significance and caveats

Ichnodiversity has been used as a proxy for environmental stress and stability in facies interpretations and to reconstruct evolutionary radiations and colonization histories in evolutionary palaeoecology. The three components of global diversity are exported from ecology and adapted for ichnology. Alpha ichnodiversity is used for palaeoenvironmental characterization, being assessed for individual facies. Beta ichnodiversity is commonly overlooked, although it may provide information about degree of similarity between ichnofaunas formed along environmental gradients. Gamma ichnodiversity may provide clues to detect ichnofossil provincialism. The concept of disparity may also prove to be significant in ichnological studies. Whereas ichnodiversity refers to ichnotaxonomic richness, ichnodisparity provides a measure of the variability of morphological plans in biogenic structures. Changes in global ichnodiversity do not necessarily parallel changes in ichnodisparity. For example, while the Cambrian explosion involved a dramatic increase in both, the Ordovician radiation essentially reflects an increase only in the former. Ichnodiversity and ichnodisparity should be used with caution because they are both affected by taphonomic processes. High diversity of superficial to shallow‐tier trace fossils may result from enhanced preservation due a poorly developed mixed layer, rather than a true reflection of ecosystem performance, as shown by underexploited infaunal ecospace after biotic crises (e.g. end‐Permian mass extinction).     

Tidal flows and sediment budgets for a salt-marsh system,Essex, England

Studies of tidal flows in salt-marsh creeks in Essex, England, show large variations in water velocity during different tidal cycles, particularly between tides below, at, and above marsh level. Water level, velocity and suspended sediment concentration have been monitored at 5-min intervals during 700 tidal cycles during the year March 1982–March 1983, and the data are being used to calculate sediment budgets for the creek system studied. Completed analyses for two of the tidal cycles show a large positive sediment flux. Because of the importance of velocity in controlling total discharge through a creek cross-section, and hence its effect on total sediment movement, we cannot extrapolate from these two below-marsh tides to any general conclusions about marsh erosion or accretion. We use these preliminary data both to demonstrate our methods and to indicate some of the complexities involved in the analysis.Acknowledgements: This work has been supported by the Natural Environment Research Council. We thank the Philip Lake Fund for financial assistance and the Department of Geography, Cambridge University, for much material support. Mr D. J. Fisher kindly gave access to his land, and Mr W. Bailey helped us greatly. We also thank Mr A. St Joseph for his help, Mr M. Diver for practical support, and Dr J. S. Pethick for discussion.     

Short-term variations in the fluxes and composition of seston in near-bottom traps in the southern North Sea

In this study we attempted to measure the potential food availability for macrobenthic interface feeders using a new device (sediment recorder) which traps bed load particles at a height of 10 cm above the sea floor. The recorder is positioned flat on the seabed and alternately exposes a shallow collector mounted in a smooth surface mimicking the sediment surface. The samples were analyzed for their content of chlorophyll a (Chl) and dry weight (DM). We compared the sediment recorder data with the results obtained with a sediment trap suspended 3.2 m above the sea floor. Measurements were carried out in spring and fall at two stations in the southern North Sea with different sediment type, maximum current velocities and biomass (sand, station B vs silty sand, station F). The recorder deployments in November yielded higher Chl fluxes and a higher quality of particles (Chl:DM ratio) than the trap at both stations. Unlike the trap samples, in which Chl and DM were always positively and strongly correlated, maximum Chl and DM fluxes in the recorder samples were out of phase, particularly at station B, pointing to a highly variable quality during the tidal cycle. Unexpectedly, Chl fluxes and Chl:DM ratios in the recorder samples at station B were higher than at station F in both seasons, although the benthic biomass at the latter station was five times higher. The highest Chl fluxes and particle quality (Chl:DM) at station B were measured during slack tides when interface feeding would be least hampered by drag forces. Station B is nevertheless characterized by a low macrobenthic biomass and a scarcity of interface feeders, specifically of suspension-feeding bivalves. Possible reasons for this apparent discrepancy are discussed. Electronic Publication     

Nutrient limitation and algal blooms in urbanizing tidal creeks

Tidal creeks are commonly found in low energy systems on the East and Gulf Coasts of the United States, and are often subject to intense watershed human development. Many of these creeks are receiving urban and suburban runoff containing nutrients, among other pollutants. During the period 1993-2001, we studied three tidal creeks located in southeastern North Carolina, a rapidly urbanizing area. All three creeks received anthropogenic nutrient loading. Oligohaline to mesohaline stations in upper tidal creek regions had much higher nutrient (especially nitrate-N) concentrations than lower creek areas, and hosted spring and summer phytoplankton blooms that at times exceeded 200 μg chlorophyll a l⁻¹. Phytoplankton biomass during winter was low at all stations in all three creeks. Spring and summer nutrient addition bioassay experiments were conducted to characterize the nutrients limiting phytoplankton growth. Water from high salinity stations in all three creeks always showed significant positive responses to nitrate-N inputs, even at concentrations as low as 50 μg N l⁻¹. Low salinity stations in upper creek areas often showed significant responses to nitrate-N inputs, but on occasion showed sensitivity to phosphorus inputs as well, indicating the influence of anthropogenic nitrate loading. During several experiments, one of the upper stations showed no positive response to nutrient inputs, indicating that these stretches were nutrient replete, and further phytoplankton growth appeared to be light-limited either by phytoplankton self-shading or turbidity. Water from upper creek areas yielded much higher chlorophyll a concentrations in bioassay experiments than did lower creek water. In general, these urbanizing tidal creeks were shown to be very sensitive to nitrogen loading, and provide a physical environment conducive to phytoplankton bloom formation in nutrient-enriched areas. Tidal creeks are important ecological resources in that they are considered to be nursery areas for many species of fish and shellfish. To protect the ecological function of these small, but very abundant estuarine systems, management efforts should recognize their susceptibility to algal blooms and focus on control of nonpoint source nutrient inputs, especially nitrogen.     

Consolidation and volumetric soil-water content of salt marsh soils following habitat modification for mosquito control

The runnelling form of habitat modification for mosquito control in saltmarsh increases tidal frequency, and may affect soil properties such as volumetric soil-water content and consolidation. The effects of habitat modification on soil properties are in turn likely to affect ecological processes. Runnels constructed mechanically to a depth of no more than 0.3 m with smooth, spoon shaped edges linked isolated mosquito-breeding pools in the high marsh to the tidal source at the saltmarsh/mangrove interface. The physical design of runnels may result in a significant increase in the frequency of flooding tidal events that flush isolated mosquito-breeding pools. Impacts of the runnelling technique were determined at three marshes using two sampling protocols: (a) comparisons between modified and unmodified shores and (b) comparisons with lateral distance from a runnel. At one marsh, volumetric water content was significantly higher at runnelled than at unrunnelled sites after tides that only partly inundated the marsh, but this pattern was not found at the other marshes. Soil consolidation was greater further from the shore, but was not different between runnelled and unrunnelled shores. Measurements at different lateral distances from runnels demonstrated higher water content levels and lower consolidation up to 5 m from runnels and no effect further away. The varied responses to runnelling at different marshes may reflect specific site characteristics such as slope and hydraulic tidal forces. Remedial strategies for similar mosquito control techniques, based on habitat modification, should include dynamic classifications of saltmarshes.     

上海市滩涂夏季底栖硅藻初步研究

报道了上海市夏季滩涂底栖硅藻的种类组成和生态分布的情况。样品于2005年8月从7个站点中采集,经处理、镜检观察,从中鉴定出硅藻98个分类单位,包括种、变种和变型,分别隶属于2纲7目10科31属。舟形藻属(Navicula)最多,共发现15个分类单位;其次为菱形藻属(Nitzschia),有10个分类单位。其中Cyclotella meneghiniana,Gyrosigma spencerii,Surirella ovata为优势种,Fragilaria capucina,Gyrosigma attenuatum,Naicula acceptata等为常见种,Melosira italica,Coscinodiscus wittianus,Navicula pygmaea等只在个别站点采到。数量分析表明,硅藻总细胞丰度变化为7.0×106-28.5×106 cells m-2,平均为17.39×106cellsm-2,在径流入海口处硅藻数量相对较多,其中淡水种比海生种多,这主要是因为长江口近岸河口水域是多种水系相混合的水体,淡水入海带来较多的淡水种类。     

VIP and CRF reduce ADAMTS expression and function in osteoarthritis synovial fibroblasts

ADAMTS (a disintegrin and metalloproteinase with thrombospondin motifs) family is known to play an important role in the pathogenesis of osteoarthritis (OA), working on aggrecan degradation or altering the integrity of extracellular matrix (ECM). Thus, the main purpose of our study was to define the role of vasoactive intestinal peptide (VIP) and corticotrophin‐releasing factor (CRF), as immunoregulatory neuropeptides, on ADAMTS production in synovial fibroblasts (SF) from OA patients and healthy donors (HD). OA‐ and HD‐SF were stimulated with pro‐inflammatory mediators and treated with VIP or CRF. Both neuropeptides decreased ADAMTS‐4, ‐5, ‐7 and ‐12 expressions, aggrecanase activity, glycosaminoglycans (GAG), and cartilage oligomeric matrix protein (COMP) degradation after stimulation with fibronectin fragments (Fn‐fs) in OA‐SF. After stimulation with interleukin‐1β, VIP reduced ADAMTS‐4 and ‐5, and both neuropeptides decreased ADAMTS‐7 production and COMP degradation. Moreover, VIP and CRF reduced Runx2 and β‐catenin activation in OA‐SF. Our data suggest that the role of VIP and CRF on ADAMTS expression and cartilage degradation could be related to the OA pathology since scarce effects were produced in HD‐SF. In addition, their effects might be greater when a degradation loop has been established, given that they were higher after stimulation with Fn‐fs. Our results point to novel OA therapies based on the use of neuropeptides, since VIP and CRF are able to stop the first critical step, the loss of cartilage aggrecan and the ECM destabilization during joint degradation.     

Zooplankton distribution and dynamics in a temperate shallow estuary

The spatial, temporal and tidal dynamics of the zooplanktonic community of the Mondego estuary was studied from January 2003 to 2004. The monthly sampling procedure included the measurement of hydrological parameters (salinity, temperature, Secchi transparency, chlorophyll a and nutrients) and the collection of zooplankton with a Bongo net of 335 μm mesh size. Zooplankton composition, distribution, density, biomass and diversity were determined. The principal component analysis (PCA) revealed the existence of a spatial gradient with the upstream sampling stations, associated to high values of nutrients, in opposition to the downstream stations characterized by higher salinity and transparency values. The Copepoda was the main dominant group and Acartia tonsa revealed to be the more abundant taxon. The spatial and temporal dynamics of zooplanktonic communities analysed by non-metric MDS showed the existence of four assemblages of species-sites, reflecting differences in zooplankton composition between both branches of the estuary. The results suggest that abundance, biomass and diversity of the zooplanktonic community are strongly influenced by the hydrological circulation pattern and by direct or indirect human impacts that occur in each branch. The northern branch is dominated by the river flow suffering from regular dredging activities and the southern branch is dominated by tidal circulation suffering from an ongoing eutrophication process.     

Role of ethylene and related gene expression in the interaction between strawberry plants and the plant growth‐promoting bacterium Azospirillum brasilense

• Induced systemic resistance (ISR) is one of the indirect mechanisms of growth promotion exerted by plant growth‐promoting bacteria, and can be mediated by ethylene (ET). We assessed ET production and the expression of related genes in the Azospirillum–strawberry plant interaction.
• Ethylene production was evaluated by gas chromatography in plants inoculated or not with A. brasilense REC3. Also, plants were treated with AgNO₃, an inhibitor of ET biosynthesis; with 1‐aminocyclopropane‐1‐carboxylic acid (ACC), a precursor of ET biosynthesis; and with indole acetic acid (IAA). Plant dry biomass and the growth index were determined to assess the growth‐promoting effect of A. brasilense REC3 in strawberry plants. Quantitative real time PCR (qRT‐PCR) was performed to analyse relative expression of the genes Faetr1, Faers1 and Faein4, which encode ET receptors; Factr1 and Faein2, involved in the ET signalling pathway; Faacs1 encoding ACC synthase; Faaco1 encoding ACC oxidase; and Faaux1 and Faami1 for IAA synthesis enzymes.
• Results showed that ET acts as a rapid and transient signal in the first 12 h post‐treatment. A. brasilense REC3‐inoculated plants had a significantly higher growth index compared to control plants. Modulation of the genes Faetr1, Faers1, Faein4, Factr1, Faein2 and Faaco1 indicated activation of ET synthesis and signalling pathways. The up‐regulation of Faaux1 and Faami1 involved in IAA synthesis suggested that inoculation with A. brasilense REC3 induces production of this auxin, modulating ET signalling.
• Ethylene production and up‐regulation of genes associated with ET signalling in strawberry plants inoculated with A. brasilense REC3 support the priming activation characteristic of ISR. This type of resistance and the activation of systemic acquired resistance previously observed in this interaction indicate that both are present in strawberry plants, could act synergistically and increase protection against pathogens.