Amphibian Diversity and Threatened Species in a Severely Transformed Neotropical Region in Mexico

Many regions around the world concentrate a large number of highly endangered species that have very restricted distributions. The mountainous region of central Veracruz, Mexico, is considered a priority area for amphibian conservation because of its high level of endemism and the number of threatened species. The original tropical montane cloud forest in the region has been dramatically reduced and fragmented and is now mainly confined to ravines and hillsides. We evaluated the current situation of amphibian diversity in the cloud forest fragments of this region by analyzing species richness and abundance, comparing assemblage structure and species composition, examining the distribution and abundance of threatened species, and identifying the local and landscape variables associated with the observed amphibian diversity. From June to October 2012 we sampled ten forest fragments, investing 944 person-hours of sampling effort. A total of 895 amphibians belonging to 16 species were recorded. Notable differences in species richness, abundance, and assemblage structure between forest fragments were observed. Species composition between pairs of fragments differed by an average of 53%, with the majority (58%) resulting from species replacement and the rest (42%) explained by differences in species richness. Half of the species detected are under threat of extinction according to the International Union for Conservation of Nature, and although their distribution and abundance varied markedly, there were also ubiquitous and abundant species, along with rare species of restricted distribution. The evident heterogeneity of the ten study sites indicates that to conserve amphibians in a mountainous region such as this one it is necessary to protect groups of fragments which represent the variability of the system. Both individually and together cloud forest fragments are very important to conservation because each remnant is inhabited by several threatened species, some of them at imminent risk of extinction.     

New species of Selaginella (Selaginellaceae) from the Guayana Highland of Venezuela

Three new species of Selaginella are described from the Guayana Highland of Venezuela: S. cardiophylla, S. hemicardia and S. pruskiana. They are illustrated and the relationships of each are discussed. Another species, provisionally determined as S. terezoana, is reported for the first time from Guyana.     

Woody Species Diversity in Forest Plantations in a Mountainous Region of Beijing,China: Effects of Sampling Scale and Species Selection

The role of forest plantations in biodiversity conservation has gained more attention in recent years. However, most work on evaluating the diversity of forest plantations focuses only on one spatial scale; thus, we examined the effects of sampling scale on diversity in forest plantations. We designed a hierarchical sampling strategy to collect data on woody species diversity in planted pine (Pinus tabuliformis Carr.), planted larch (Larix principis-rupprechtii Mayr.), and natural secondary deciduous broadleaf forests in a mountainous region of Beijing, China. Additive diversity partition analysis showed that, compared to natural forests, the planted pine forests had a different woody species diversity partitioning pattern at multi-scales (except the Simpson diversity in the regeneration layer), while the larch plantations did not show multi-scale diversity partitioning patterns that were obviously different from those in the natural secondary broadleaf forest. Compare to the natural secondary broadleaf forests, the effects of planted pine forests on woody species diversity are dependent on the sampling scale and layers selected for analysis. Diversity in the planted larch forest, however, was not significantly different from that in the natural forest for all diversity components at all sampling levels. Our work demonstrated that the species selected for afforestation and the sampling scales selected for data analysis alter the conclusions on the levels of diversity supported by plantations. We suggest that a wide range of scales should be considered in the evaluation of the role of forest plantations on biodiversity conservation.     

Species Composition,Physiognomy and Plant Diversity of the Tropical Montane Evergreen Broad-leaved Forest in Southern Yunnan

Species composition, physiognomy and plant diversity of the less known tropical montane forests in southern Yunnan were studied based on the data from 15 sampling plots in three sites. These forests are mainly dominated by the families Theaceae, Fagaceae, Lauraceae and Euphorbiaceae in floristic composition, and dominated by evergreen phanerophytes with mesophyllous leaves. These forests are similar to lower montane rain forests in equatorial southeastern Asia in floristic composition and altitudinal distributions, but differ in physiognomy by having few epiphytes, but more lianas and more plants with compound leaves. These differences could be due to strongly seasonal climate and so-called mass elevation effect in southern Yunnan. They also differ from the tropical seasonal rain forests at lower altitudes in southern Yunnan by having conspicuously lower species richness, few epiphytes, fewer mega-mesophanerophytes, more abundant micro-nanophanerophytes and hemicryptophytes and more plants with microphyllous leaves. It is suggested that these forests could be termed tropical montane evergreen broad-leaved forests, and be a vegetation type from the northern margin of mainland southeastern Asia controlled by a strongly seasonal climate.     

The Bromeliad Microcosm and the Assessment of Faunal Diversity in a Neotropical Forest1

The faunas of tank bromeliads were sampled over two years in three forest types at different elevations in the Luquillo Experimental Forest, Puerto Rico, and the diversity of their animal communities compared. Bromeliad plants behaved as islands in that, within forests, the species richness and abundance of their animal communities were significantly and positively correlated with increase in plant size. The amount of canopy debris they accumulated was similarly correlated with increase in plant size. Overall diversity was lowest in the dwarf forest, where plants were uniformly small. Animal communities were stable from year to year, and could be characterised for each forest type and for compartments within the plant. They showed a pattern of high dominance, which increased with elevation (Mc-Naughton index 37, 54, and 73, respectively, for the tabonuco, palo Colorado, and dwarf forest). Alpha-diversity for sites sampled in each year reflected net primary productivity (NPP) of the forest, declining with increasing elevation when animal abundance measures were used (jackknife estimates of Simpson's diversity index 6.54 & 11.04 [tabonuco], 3.53 & 6.22 [palo Colorado], and 2.75 & 2.17 [dwarf forest]). Species richness over the two years, however, was highest in the intermediate palo Colorado forest (187 species), compared to 146 and 88 in the tabonuco and dwarf forests, respectively. These figures were close to jackknife estimates of maximum species richness. The difference in species richness between tabonuco and palo Colorado forests was significant in one year only. In addition to NPP, other factors, such as litter quality and the structural complexity of the habitat in the palo Colorado forest, may have influenced species richness. The most abundant species in individual plants were also the most widely occurring, confirming known patterns of abundance and distribution in other functional groups. Diversity within bromeliad microcosms at different elevations supported known relationships between diversity, productivity, and habitat complexity along gradients and was not related to differences in the total bromeliad habitat available for colonization.     

Phylogeography and Cryptic Species Diversity of Paramesotriton caudopunctatus Species Group(Salamandridae: Paramesotriton) in Guizhou,China

The Paramesotriton caudopunctatus species group is mainly distributed in the karst mountain ecosystems of Guizhou, China. Although some species have been included in previous phylogenetic studies, the evolutionary relationships and divergence-time of members of this species group as a whole remain unexplored. In this study, we report the sequencing of one protein coding mitochondrial gene fragment(ND2) and one nuclear gene(POMC), and use a combination of phylogenetic analyses and coalescent simulations to explore the cryptic diversity and evolutionary history of the P. caudopunctatus species group. Phylogenetic relationships revealed that the P. caudopunctatus species group is composed of two major groups, i. e., East Clade and Western-South Clade. The divergence-time and ancestral area estimation suggested that the P. caudopunctatus species group likely originated in the Doupeng Mountains in Guizhou, China at 12.34 Ma(95% HPD: 8.30–14.73), and intraspecific divergence began at about 2.17 Ma(95% HPD: 1.39–2.97). This timing coincides with the orogenesis of the Miaoling Mountains during the Late Miocene to early Pleistocene. The delimitation of species in the P. caudopunctatus species group supports the existence of the currently identified species, and consensus was confirmed across methods for the existence of least to two cryptic species within what has been traditionally considered to be P. caudopunctatus species group. This study is of significance for understanding the species formation, dispersal, and diversity of the tailed amphibians in the karst mountains ecosystem of Guizhou and the role of the Miaoling Mountains as a geographical barrier to species dispersal.     

Cyanobacteria of Rocks and Soils of the Orinoco Lowlands and the Guayana Uplands,Venezuela

The occurrence of 23 cyanobacterial species, belonging to 9 different genera and 5 cyanobacterial lichen species of 5 different genera on exposed, open rock surfaces of inselbergs and on soil in savannas of the Orinoco lowlands and the Guayana uplands is described. Their distribution patterns and frequency within the different habitats are given. The filamentous procaryotic blue-green algae/cyanobacteria Stigonema ocellatum and Scytonema crassum, together with the unicellular cyanobacterium Gloeocapsa sanguinea were the most frequent species on rocks, whereas the filamentous cyanobacterium, Schizothrix telephoroides, dominated in cyanobacterial mats on the savanna soil. All species showed intensively coloured sheaths, either brown or yellow in the case of Stigonema ocellatum and Scytonema crassum, or red in Gloeocapsa sanguinea and Schizothrix telephoroides. In addition, a number of cyanobacterial lichens occurred.     

High Levels of Diversity Uncovered in a Widespread Nominal Taxon: Continental Phylogeography of the Neotropical Tree Frog Dendropsophus minutus

Species distributed across vast continental areas and across major biomes provide unique model systems for studies of biotic diversification, yet also constitute daunting financial, logistic and political challenges for data collection across such regions. The tree frog Dendropsophus minutus (Anura: Hylidae) is a nominal species, continentally distributed in South America, that may represent a complex of multiple species, each with a more limited distribution. To understand the spatial pattern of molecular diversity throughout the range of this species complex, we obtained DNA sequence data from two mitochondrial genes, cytochrome oxidase I (COI) and the 16S rhibosomal gene (16S) for 407 samples of D. minutus and closely related species distributed across eleven countries, effectively comprising the entire range of the group. We performed phylogenetic and spatially explicit phylogeographic analyses to assess the genetic structure of lineages and infer ancestral areas. We found 43 statistically supported, deep mitochondrial lineages, several of which may represent currently unrecognized distinct species. One major clade, containing 25 divergent lineages, includes samples from the type locality of D. minutus. We defined that clade as the D. minutus complex. The remaining lineages together with the D. minutus complex constitute the D. minutus species group. Historical analyses support an Amazonian origin for the D. minutus species group with a subsequent dispersal to eastern Brazil where the D. minutus complex originated. According to our dataset, a total of eight mtDNA lineages have ranges >100,000 km². One of them occupies an area of almost one million km² encompassing multiple biomes. Our results, at a spatial scale and resolution unprecedented for a Neotropical vertebrate, confirm that widespread amphibian species occur in lowland South America, yet at the same time a large proportion of cryptic diversity still remains to be discovered.     

Southern Caribbean Neogene palaeobiogeography revisited. New data from the Pliocene of Cubagua,Venezuela

Based on new data from the Pliocene gastropod assemblage of Cubagua Island, Venezuela, the palaeobiogeography of the southern Caribbean is reviewed. The data obtained from the southern Caribbean assemblages demonstrate a highly endemic fauna along the northern coasts of South America, distinct from that found in the neighbouring Isthmian region to the west, which has probably been in place since at least the early Neogene. These assemblages are characterised by a relative stability at generic level, but an extremely high turnover rate at specific level. The name Colombian–Venezuelan–Trinidad Subprovince is chosen over Puntagavilanian Subprovince and chorotypes and chronotypes are selected for the Gatunian Province and the Colombian–Venezuelan–Trinidad Subprovince.     

Holocene global warming and the origin of the Neotropical Gran Sabana in the Venezuelan Guayana

Aim The assumedly anomalous occurrence of savannas and forest–savanna mosaics in the Gran Sabana – a neotropical region under a climate more suitable for tropical rain forests – has been attributed to a variety of historical, climatic, and anthropogenic factors. This paper describes a previously undocumented shift in vegetation and climate that occurred during the early Holocene, and evaluates its significance for the understanding of the origin of the Gran Sabana vegetation. Location A treeless savanna locality of the Gran Sabana (4°30′–6°45′ N and 60°34′–62°50′ W), in the Venezuelan Guayana of northern South America, at the headwaters of the Caroní river, one of the major tributaries of the Orinoco river. Methods Pollen and charcoal analysis of a previously dated peat section spanning from about the Pleistocene/Holocene boundary until the present. Results Mesothermic cloud forests dominated by Catostemma (Bombacaceae) occupied the site around the Pleistocene/Holocene boundary. During the early Holocene, a progressive but relatively rapid trend towards savanna vegetation occurred, and eventually the former cloud forests were replaced by a treeless savanna. Some time after the establishment of savannas, a marked increase in charcoal particles indicates the occurrence of the first local fires. Main conclusions The occurrence of cloud forests at the Pleistocene/Holocene boundary contradicts the historical hypothesis according to which the Gran Sabana is a relict of the hypothetical widespread savannas that have been assumed to have dominated the region during the last glaciation. The first local fires recorded in the Holocene were on savanna vegetation, which is against the hypothesis of fire as the triggering factor for the establishment of these savannas. Climate change, in the form of global warming and a persistently drier climate, emerges as the most probable cause for the forest–savanna turnover.     

Three New Species of Thraulodes (Ephemeroptera: Leptophlebiidae: Atalophlebiinae) from Venezuela

Three new species of Thraulodes from Venezuela are described. One species is known from male and female imagines, and the other two only from male imagines. With this, the known Thraulodes species for Venezuela are four. A key for the male imagines of the known species of Thraulodes from Venezuela is provided.     

Molecular and Morphological Evidence Reveals a New Species in the Phyllomedusa hypochondrialis Group (Hylidae,Phyllomedusinae) from the Atlantic Forest of the Highlands of Southern Brazil

The taxonomic status of a disjunctive population of Phyllomedusa from southern Brazil was diagnosed using molecular, chromosomal, and morphological approaches, which resulted in the recognition of a new species of the P. hypochondrialis group. Here, we describe P. rustica sp. n. from the Atlantic Forest biome, found in natural highland grassland formations on a plateau in the south of Brazil. Phylogenetic inferences placed P. rustica sp. n. in a subclade that includes P. rhodei + all the highland species of the clade. Chromosomal morphology is conservative, supporting the inference of homologies among the karyotypes of the species of this genus. Phyllomedusa rustica is apparently restricted to its type-locality, and we discuss the potential impact on the strategies applied to the conservation of the natural grassland formations found within the Brazilian Atlantic Forest biome in southern Brazil. We suggest that conservation strategies should be modified to guarantee the preservation of this species.     

New Host and Locality Records for the Ixodes Auritulus (Acari: Ixodidae) Species Group, with a Review of Host Relationships and Distribution in the Neotropical Zoogeographic Region

New Neotropical records are presented for ticks belonging to the Ixodes auritulus Neumann, 1904, species group, together with a review of hosts and localities from which members of this complex have previously been collected. The range of the I. auritulus species group is now understood to include Colombia, and 15 bird species are listed as new hosts. From Guatemala to southern Argentina and Chile, specimens of the I. auritulus group have been found on birds belonging to the orders Ciconiiformes, Columbiformes, Falconiformes, Galliformes, Passeriformes, Piciformes, Procellariiformes and Tinamiformes. Passeriform birds are probably the principal hosts, sustaining tick populations throughout the Neotropics. Collection data have yielded four areas – southern South America (from 56° S to 51° S), southern Brazil (25° S–22° S), south-central Peru (14° S–10° S) and Central America (10° N–15° N) – where the I. auritulus group appears to commonly parasitize birds, but additional collections may show that the range of this complex is less discontinuous than currently perceived. Several morphological differences are described for ticks within and among these areas, but it is still unclear whether the I. auritulus group comprises more than one species.     

A New Neotropical Genus and Species of Odontocerinae (Trichoptera: Odontoceridae) from Southeastern Brazil

Anastomoneura gen. nov. and A. guahybae sp. nov. are described and illustrated based on adult male and female specimens from the Mantiqueira mountain range, Minas Gerais State. This is the third genus recorded of the family Odontoceridae from South America. The new genus is characterized by the forewing anastomosis of veins R₄ and R₅ and male genitalia with a unique, tubular, projection dorsad to the plates of tergite X.     

福建万木林自然保护区森林群落物种多样性

福建万木林自然保护区森林群落物种多样性朱锦懋姜志林郑群瑞蒋伟（南京林业大学森林资源与环境学院,２１００３７）（福建省建瓯市林委,３５３１００）ＳｐｅｃｉｅｓＤｉｖｅｒｓｉｔｙｉｎｔｈｅＦｏｒｅｓｔＣｏｍｍｕｎｉｔｙｏｆＷａｎｍｕｌｉｎＮａｔｕｒｅＲｅ...     

The Photosynthetic Characteristics of Saplings of Eight Canopy Tree Species in a Disturbed Neotropical Rain Forest

Foliar gas exchange characteristics, understorey microclimate, and crown irradiation were assessed for saplings of eight canopy tree species in two plots of neotropical rain forest with different degrees of canopy opening. Species studied belonged to different putative guilds: shade intolerants (both short-lived--pioneers--and long-lived), intermediates, and shade-tolerants. A considerable overlap was recorded between species in values of the photosynthetic rate per unit leaf area (P_N). The highest median P_N (1.26 μmol m^-2 s^-1) was recorded in the pioneer Croton killipianus, while slightly lower median values were recorded in Simarouba amara and Pentaclethra macroloba, and markedly lower values in two species of Vochysiaceae (Qualea paraense and Vochysia ferruginea), both putative intolerants. Highest median stomatal conductance (g_s) was also shown by C. killipianus, while S. amara, P. macroloba, and L. procera exhibited intermediate values, and the lowest g_s was shown by V. ferruginea and Q. paraense. Overall irradiance and crown irradiation, P_N, and g_s of saplings were higher in the plot which had previously received a silvicultural treatment. Most values of photosynthetic photon flux density (PPFD) were <100 μmol m^-2 s^-1 in both plots, with shortlived peaks of up to 2000 μmol m^-2 s^-1 in the treated plot. When the relationship between P_N and irradiance (I) was examined by fitting P_N/I curves, the degree of fit varied markedly between species, values of the regression coefficient r² were between 0.09 and 0.51. No significant differences between species were recorded in P_max and species also demonstrated little variation in the predicted values of dark respiration (R_D), values varying between -0.51 and -1.46 μmol m^-2 s^-1 in Q. paraense and Minquartia guianensis, respectively. Fitted values of apparent quantum efficiency were also fairly uniform, generally falling within the range 0.02-0.03 mol(CO₂) mol^-1(photon). This revised version was published online in June 2006 with corrections to the Cover Date.     

Carbon Accumulation in Neotropical Dry Secondary Forests: The Roles of Forest Age and Tree Dominance and Diversity

Tropical secondary forests are important sinks for atmospheric carbon, yet C uptake and accumulation rates are highly uncertain, and the mechanisms poorly understood. We evaluated the recovery of C stocks in four pools (aboveground biomass, litter, roots and topsoil) during dry forest regrowth by combining a space for time replacement (that is, a chronosequence) with a repeated measurements approach (that is, a resampling). We fit nonlinear models to chronosequence data to test whether forest age could explain differences in C stocks across sites, and to changes in aboveground biomass calculated from resampling over two 3-year periods, to test the predictive potential of forest age. We combined data from both approaches into structural equation models (SEM) to assess forest age and tree community attributes (diversity and dominance) as drivers of C stocks and changes in aboveground biomass. Forest age explained differences across sites in C stocks for aboveground biomass, litter and live roots, but not for the remaining pools. Observed C stock changes in aboveground biomass were poorly predicted by forest age. SEM revealed that aboveground biomass C was consistently and positively related to forest age and to the community weighted mean of maximum tree height (H _max CWM), but not to tree diversity. Observed C stock changes were related only to H _max CWM, although not consistently across the two 3-year periods. Our results highlight that the chronosequence approach can yield reasonable insights into long-term C accumulation trends, but erroneous estimates of C change over specific time periods. They also show that, in addition to age, dominance by tall statured species, but not tree species diversity, plays a significant role in C accumulation.     

Phylogeography of a morphologically diverse Neotropical montane species, the Common Bush-Tanager (Chlorospingus ophthalmicus)

The Common Bush-Tanager (Chlorospingus ophthalmicus) is distributed in Neotropical cloud-forests from Mexico to Argentina and contains 25 subspecies divided into eight subspecies groups based on biogeography, eye coloration, presence of a postocular spot and chest band. All of Central America is occupied by a single subspecies group; whereas the Andes are believed to be occupied by seven additional subspecies groups. We used five mitochondrial genes to investigate the phylogeography and possible species limits of the ophthalmicus complex. A total of 14 monophyletic lineages were uncovered within the ophthalmicus complex, including three clades currently classified as separate species (C. semifuscus, inornatus and tacarcunae). Divergence estimates for these clades date between 0.8 and 5.2 million years ago (Ma). Contrary to expectations based on morphological diversity, phylogeographic structure was greatest in Mexico and Central America and weakest in the Andes. Morphological and genetic divergences were not significantly correlated and most morphologically defined subspecies groups were not supported. Our evidence suggests the ophthalmicus complex originated in Mexico ca. 6.0 Ma (million years ago) and spread south into the Andes ca. 4.7 Ma before the completion of the Isthmus of Panama. Three genetically divergent lineages of ophthalmicus that formed in the Andes possess a complex checkerboard distribution, with a single lineage represented by disjunct populations from Venezuela and the southern Andes, while intervening populations in Ecuador and Central Peru form two genetically and morphologically divergent lineages.