Synthesis,crystal structure,and DNA-binding properties of a new copper (II) complex containing mixed-ligands of 2,2′-bipyridine and p-methylbenzoate

A novel copper complex of [Cu(bpy)(pba)₂ · H₂O] · 0.5H₂O (bpy = 2,2′-bipyridine, pba = p-methylbenzoate) was synthesized. The interaction of the complex to native fish sperm DNA was investigated through electrochemistry, electronic absorption spectroscopy and viscosity experiments. In the X-ray crystallography structure, the copper (II) ion is coordinated by two oxygen atoms of two p-methylbenzoate groups, two nitrogen atoms of 2,2′-bipyridine and one water molecule. The observed changes in the physicochemical features of the copper (II) complex on binding to DNA suggested that the complex bind to DNA with intercalation mode via 2,2′-bipyridine ring into DNA base pairs. Electrochemical studies revealed that the complex prefer to bind to DNA in Cu(I) form rather than Cu(II) oxidation state form. Additionally, the nuclease activity of the title complex was assessed by gel electrophoresis assay and the results shown that the copper complex can cleave pBR322 DNA effectively in the presence of ascorbic acid.     

Synthesis,X-ray structures,and magnetic properties of heterometal dinuclear Cr(III)–M(II) complexes

New 3,5-bis(2-pyridyl)pyrazolato (bpypz) bridged heterometal dinuclear complexes [(nta)Cr(μ-bpypz)M^II(picen)]⁺ (M = Mn(II), Ni(II)) and [(acac)₂Cr(μ-bpypz)Ni^II(picen)]²⁺ (nta = nitrilotriacetate, picen = N,N′-bis(2-pyridylmethyl)ethylenediamine, acac = acetylacetate) were synthesized and characterized by the X-ray analysis, ESI-MS and the magnetic measurements, and/or ²H NMR spectra. The molecular structures were compared from a viewpoint of the conformation of the picen depending on M^II ionic radii or different modes of hydrogen bonds. The picen in [(nta)Cr(μ-bpypz)Mn^II(picen)]BF₄ takes an abnormal conformation with intramolecular bifurcated three-center hydrogen bonds between two carboxylate oxygens of nta and an amine proton of the picen as found for the previously reported corresponding Fe(II) complex [K. Ni-iya, A. Fuyuhiro, T. Yagi, S. Nasu, K. Kuzushita, S. Morimoto, S. Kaizaki, Bull. Chem. Soc. Jpn. 74 (2001) 1891]. On the other hand, for both Ni(II)-nta and Ni(II)-acac complexes, the picen takes a normal conformation with only a two-center hydrogen bond between non-bridging ligands. The magneto-structural relation is discussed for the Cr(III)–Ni(II) complexes in connection with the orthogonality or orbital overlap arising from the difference in distortion around Cr(III) moiety.     

Synthesis, structure and magnetic properties of two μ-oxo and thiocyanato-bridged manganese(II)-mercury(II) coordination polymers

Mixed-metal thiocyanate complexes [MnHg(SCN)₄(NOP)] (1) and [MnHg(SCN)₄(DMSO)] (2) (NOP = 3-methyl-4-nitropyridine-N-oxide, DMSO = dimethylsulfoxide) have been synthesized and structurally characterized by single crystal X-ray analysis. Complex 1 and 2 both contain a [Mn₂(μ₂-O)₂] lozenge, which is bridged to Hg(II) ions by end-to-end thiocyanate groups to form a 2-D and 3-D polymeric network, respectively. Magnetic studies indicate that both complexes are anti-ferromagnets, with 1 showing anti-ferrimagnetic ordering below 8.0 K.     

Synthesis,structure and properties of syn-bis(μ-N-methylpiperidine-4-thiolate tricarbonyl iron)

The reaction of Fe₃(CO)₁₂ with N-methyl-4- mercaptopiperidine gives the title compound. Crystals are monoclinic, space group P2₁/c with a = 12.922(2), b = 14.784(5), c = 13.607(2) Å, β = 112.41(1)°. With Z = 4 the calculated density is 1.49 g cm⁻³. Solution of the structure by direct methods led to a final weighted R factor of 0.029 for 2270 independent reflections. The FeFe bond length is 2.534(1) Å and the S···S distance of 2.940(1) suggests bonding interactions. By heating upon reflux in toluene during 10 h, the IR spectrum of the chromatographed solution indicates the syn isomer formation. The reaction with CH₃I and HClO₄ produces the methylation and protonation, respectively, of the nitrogen atoms of the piporidine rings giving rise to the formation of the [Fe(μ-(CH₃)₂NC₅H₉S)(CO)₃]₂I₂·2H₂O and [Fe(μ-HCH₃NC₅H₉S)(CO)₃]₂·H₂O·CH₃OH compounds.     

Synthesis, structure and magnetic property of μ-phenoxo-μ-acetato-bis(η-acetato)dicobalt(II, II) complexes

Dinuclear cobalt(II) complexes Co₂(bpmp)(OAc)₃ (1) and Co₂(bpcp)(OAc)₃ (2) have been synthesized by using acyclic ligands 2,6-bis((4-(pyridin-2-yl)pyrimidin-2-ylthio)methyl)-4-methylphenol [H(bpmp)] and 2,6-bis((4-(pyridin-2-yl)pyrimidin-2-ylthio)methyl)-4-chlorophenol [H(bpcp)] with versatile coordination sites. X-ray analysis uncovered that complex 1 · 3H₂O contains a μ-phenoxo-μ-acetato-bis(η²-acetato) dicobalt(II, II) core. Magnetic susceptibility was measured for 1 over the temperature range 1.8-300 K, and the best theoretical fitting parameters were g = 2.12(6), J = −3.63(9) cm⁻¹ and D = −12(4) cm⁻¹.     

Syntheses, structures and magnetic properties of tetranuclear and trinuclear nickel(II) complexes with β-diketone-functionalized pyridinecarboxylate ligand

The new β-diketone-functionalized pyridinecarboxylate ligand 2-(3-oxo-3-phenyl-propionyl)-6-pyridinecarboxylic acid (H₂L) has been synthesized and fully characterized. Its tetranuclear and trinuclear nickel(II) coordination compounds [Ni₄L₄(DMF)(H₂O)₃]·2.5DMF·3H₂O (1) and [Ni₃L₂(OAc)₂(DMF)₂ (H₂O)₂]·DMF·H₂O (2) have also been synthesized and characterized by single crystal X-ray diffraction. Compound 1 has a [2 × 2] molecular grid structure and 2 is a trinuclear structure. The magnetic properties study of 1 and 2 revealed the intramolecular antiferromagnetic exchange coupling between the Ni(II) ions exists.     

Synthesis, crystal structures and magnetic properties of two bis(μ-phenoxido)dicopper(II) complexes derived from reduced Schiff base ligands

Two phenoxido bridged dinuclear Cu(II) complexes, [Cu₂(L¹)₂(NCNCN)₂] (1) and [Cu₂(L²)₂(NCNCN)₂]·2H₂O (2) have been synthesized using the tridentate reduced Schiff-base ligands 2-[1-(2-dimethylamino-ethylamino)-ethyl]-phenol (HL¹) and 2-[1-(3-methylamino-propylamino)-ethyl]-phenol (HL²), respectively. The complexes have been characterized by X-ray structural analyses and variable-temperature magnetic susceptibility measurements. Both the complexes present a diphenoxido bridging Cu₂O₂ core. The geometries around metal atoms are intermediate between trigonal bipyramid and square pyramid with the Addison parameters (τ) = 0.57 and 0.49 for 1 and 2, respectively. Within the core the Cu–O–Cu angles are 99.15° and 103.51° and average Cu–O bond distances are 2.036 and 1.978 Å for compounds 1 and 2, respectively. These differences have marked effect on the magnetic properties of two compounds. Although both are antiferromagnetically coupled, the coupling constants (J = −184.3 and −478.4 cm⁻¹ for 1 and 2, respectively) differ appreciably.     

Structures,magnetic properties,and XPS of cyanide-bridged NdIII/SmIII/GdIII–CrIII complexes

Synthesis, structural characterization, and spectroscopic and magnetic properties of three new cyano-bridged 3d–4f bimetallic complexes, Ln^III(DMF)₄(H₂O)₃Cr^III (CN)₆ · nH₂O (Ln = Nd, Sm, Gd), have been described. The Nd–Cr complex crystallizes in the monoclinic P2₁/n space group with the following unit cell parameters: a = 20.063(7) Å, b = 8.967(4) Å, c = 18.023(6) Å, b = 96.12(3)°, V = 3224(2) Å³, and Z = 4. The neodymium (III) ion, which adopts anti-prism eight-coordination environment, is linked to the [Cr^III(CN)₆]³⁻ moiety through a bridging cyanide ligand with Nd–N = 2.550(4) Å and Nd–N–C = 164.4(4)°. The variable-temperature (0.5 T at 2–300 K) and variable-field (0–5 T at 2 and 5 K) magnetic measurements reveal that the weak interaction of Gd–Cr complexes differs from that of Nd–Cr and Sm–Cr ones mainly because of the lack of orbital angular momentum. The XPS and diffuse reflectance electronic spectra were also measured to discuss charge transfer transitions concerning π-backdonation from the viewpoint of magneto-optical functions.     

Synthesis, crystal structure and magnetic properties of a polynuclear Cu(II) complex: catena-poly[aqua(di-2-pyridylamine)copper(II)(μ-formato-O,O′)nitrate]

The synthesis, X-ray structure, spectroscopic and magnetic properties of a zig-zag formato-bridged chain complex with the formula [Cu(dpyam)(μ-O₂CH)(OH₂)]_n(NO₃)_n (1) (in which dpyam = di-2-pyridylamine) is described.The geometry of the copper(II) ion is distorted square pyramidal with a basal plane consisting of two nitrogen atoms of the dpyam ligand (Cu-N distances 1.987(3) and 2.010(3) Å) and two oxygen atoms of two different formato ligands (Cu-O distances 1.974(2) and 1.975(2) Å). A coordinated water molecule occupies the axial position at a distance of 2.222(3) Å. The copper atoms are bridged unsymmetrically by a formato anion in a syn-anti arrangement, resulting in a polymeric zig-zag chain structure.The magnetic susceptibility measurements (5-280 K) agree with a very weak ferromagnetic chain interaction between the Cu centres with a J value of 0.75 cm⁻¹.     

Mesogenic and magnetic properties of nickel(II) complexes formed from 2′-(4-alkyloxyphenyl)malondialdehydes

The synthesis, characterization, thermal behavior and magnetic properties of a number of bis[2-(4-alkyloxyphenyl)malondialdehyde] nickel(II) complexes are reported. X-ray studies of the nickel(II) complexes were performed. It was found that the nickel(II) complexes show liquid-crystalline smectic A phases over a broad temperature range with low melting points. The temperature-dependent magnetic susceptibility measurements of the bis[2-(4-decyloxyphenyl)malondialdehyde] nickel(II) complex were carried out in the range of 4.2–480 K. The temperature dependent magnetic susceptibilities and magnetic moments of this compound (_eff=3.27 _B at 300 K) indicate that the nickel centers are octahedrally coordinated. Models for the molecular arrangement in the crystalline and liquid-crystalline phases are discussed on the basis of the magnetic data. In spite of the oxygen bridge between the nickel centers, no exchange interactions were found in the crystalline and liquid-crystalline phases.     

Syntheses, structures and magnetic properties of μ1,5 dicyanamide bridged coordination polymers of copper(II) and nickel(II) containing a tetradentate N-donor Schiff base

One neutral [Cu₂(enbzpy)(dca)₄]_n (1) and one polycationic [Ni(enbzpy)(dca)]_n(ClO₄)_n (2) [enbzpy = N,N′-(bis-(pyridin-2-yl)benzylidene)ethane-1,2-diamine; dca = dicyanamide] 1D coordination polymers are synthesized and characterized. X-ray structural analyses reveal each copper(II) center in 1 to adopt a distorted square pyramidal geometry with a CuN₅ chromophore coordinated through two N atoms of the Schiff base behaving as a binucleting bis(bidentate) ligand and three nitrile N atoms of one terminal and two single μ_1,5 dca units leading to a 1D ladder structure. In 2, each nickel(II) center has a distorted octahedral coordination environment with an NiN₆ chromophore bound by four N atoms of enbzpy through tetradentate chelation and two nitrile N atoms of two different single bridged μ_1,5 dca units; the latter connects other neighboring metal centers in a non-ending fashion affording a 1D chain. Variable-temperature magnetic susceptibility measurements of 1 and 2 show weak antiferromagnetic interactions among the metal centers through μ_1,5 dca bridges.     

Syntheses, structures, and magnetic properties of two new μ-alkoxo-μ-pyrazolato bridged dicopper(II) complexes

The syntheses, structures, and magnetic properties of two new μ-alkoxo-μ-pyrazolato heterobridged compounds, [Cu ^II₂(L¹-F)(μ-prz)] (1) and [Cu ^II₂(L¹-2OMe) (μ-prz)] · 0.5 CH₃CN (2) (prz=pyrazolato; H₂L¹-F=1,3-bis(3-fluorosalicylideneamino)-2-propanol; H₂L¹-2OMe=1,3-bis(4,6-dimethoxy salicylideneamino)-2-propanol) have been reported. Compound 1 crystallizes in triclinic space group with a=8.6392(10) Å, b=10.6431(9) Å, c=11.6809(13) Å, α=85.972(8)°, β=71.492(9)°, and γ=72.221(9)°, while the unit cell parameters of 2 are as follows: space group: monoclinic C2/c, a=28.2948(5) Å, b=7.3033(2) Å, c=26.3933(5) Å, and β=96.243(1)°. The variable-temperature magnetic susceptibility measurements reveal that the metal centers in both the compounds are antiferromagnetically coupled with J=−200 cm⁻¹ for 1 and J=−175 cm⁻¹ for 2. The magnetic behaviors have been explained on the basis of two opposing factors, complementarity and countercomplementarity of magnetic orbitals.     

Synthesis and structure of an oxidation product of hemiporphyrazinatoiron(II): Monoaquo-μ-oxo-bis(hemiporphyrazinato)iron(III). A linear μ-oxo dimer containing six- and five-coordinated iron atoms

The interaction between dioxygen and wer N-base solutions of Fe(II) hemiporphyrazine (Fehp) leads to the title compound, which is a high-spin antiferromagnetically coupled iron(III) complex. The crystal and molecular structure has been determined by X-rays. The unit cell is the tetragonal space group P4/ncc, with a=b=19.083(5) and c=23.509(5) Å. 2141 unique observed reflections were used in the analysis, and the final conventional R is 0.059. The structure consists of Fe(III)hp μ-oxo dimers having strictly linear FeOFe units and a nearly eclipsed internal configuration. This is the first observation of the formation of a mono-adduct in μ-oxo dimer via axial coordination of a H₂O molecule. The resulting asymmetric dimer, H₂OFeAhpOFeBhp contains a six-coordinated Fe atom (FeA) lying in the plane of the four Ns of the macrocycle. The second Fe atom (FeB) is five-coordinated and lies outside of the coordination plane by 0.45 Å. The FeO distances are: FeAO=1.782(7) Å and FeBO=1.739(7) Å. The axial coordination of the water (FeAO_w=2.210(9) Å) seems weak, probably due to the labilising trans influence of the μ-oxo ligand. The dimers are paired coaxially to form tetramers, which are in turn connected via a two- dimensional net of hydrogen bonds. The structural results are correlated with spectroscopic, thermogravimetric and magnetic properties.     

Synthesis, structure and photocatalytic activity of a remarkably bent, cofacial ethene-linked diiron (III) μ-oxobisporphyrin

Synthesis and characterization of cis and trans 1,2-bis[Chloroiron(III) 5-(2,3,7,8,12,13,17,18-octaethylporphyrinyl)]ethenes are described. Upon treatment with 5% NaOH, cis form of the molecule immediately converts to remarkably bent diiron (III)-μ-oxo bisporphyrin which transforms to cis bisChloroFe(III)porphyrin again by the addition of 5% HCl. This facile transformation is reversible with sharp change in color in which the bisporphyrin platform ‘open’ and ‘close’ its binding pockets with very high vertical flexibility in a single molecular framework. Single crystal X-ray structural characterization reveals cis diiron(III)-μ-oxo bisporphyrin in which Fe-O-Fe unit is remarkable bent with 150.9(2)° angle. Two porphyrin rings in the molecule are not slipped but face-to-face in a fully eclipsed geometry and are placed so close that some of the carbon atoms from each of the macrocycles are driven to be essentially less than the van der Waals contacts (<3.4 Å). Two rings in the oxo-bridged dimer also make the interplanar angle of 27.7° instead of expected angle of 60° due to the bridging alkenic bond. EPR, ¹H NMR and Mössbauer spectral data are indicative of strong anti-ferromagnetic coupling between two high-spin iron(III) centers via bridging oxo group. The complex catalyzes the rapid photoinduced oxygenation of phosphites under mild condition using aerial O₂. Electrochemical data reveals that the diiron(III)-μ-oxo bisporphyrin in dichloromethane undergoes four reversible/quasi-reversible one electron oxidation and one electron reductions. The presence of two porphyrin macrocycles within a short distance in the μ-oxo species makes the porphyrin core highly nonplanar and more electron rich that might responsible for easier oxidations compared to [Fe(OEP)]₂O.     

Density functional study of the catalytic cycle of nickel–iron [NiFe] hydrogenases and the involvement of high-spin nickel(II)

In light of recent experiments suggesting high-spin (HS) Ni(II) species in the catalytic cycle of [NiFe] hydrogenase, a series of models of the Ni(II) forms Ni-SI(I,II), SI-CO and Ni-R(I,II,III) were examined in their high-spin states via density functional calculations. Because of its importance in the catalytic cycle, the Ni-C form was also included in this study. Unlike the Ni(II) forms in previous studies, in which a low-spin (LS) state was assumed and a square-planar structure found, the optimized geometries of these HS Ni(II) forms resemble those observed in the crystal structures: a distorted tetrahedral to distorted pyramidal coordination for the NiS4. This resemblance is particularly significant because the LS state is 20-30 kcal/mol less stable than the HS state for the geometry of the crystal structure. If these Ni(II) forms in the enzyme are not high spin, a large change in geometry at the active site is required during the catalytic cycle. Furthermore, only the HS state for the CO-inhibited form SI-CO has CO stretching frequencies that match the experimental results. As in the previous work, these new results show that the heterolytic cleavage reaction of dihydrogen (where H2 is cleaved with the metal acting as a hydride acceptor and a cysteine as the proton acceptor) has a lower energy barrier and is more exothermic when the active site is oxidized to Ni(III). The enzyme models described here are supported by a calibrated correlation of the calculated and measured CO stretching frequencies of the forms of the enzyme. The correlation coefficient for the final set of models of the forms of [NiFe] hydrogenase is 0.8.     

Synthesis,characterization, antimicrobial activity and structure–activity relationships of new aryldisulfonamides

A series of aromatic disulfonamide (1-8) derivatives and 4-methylbenzenesulfonyl hydrazide (9) were synthesized and characterized. All compounds were evaluated in vitro for their antimicrobial activity against Staphylococcus aureus ATCC 25953, Bacillus cereus ATCC 6633, Bacillus magaterium RSKK 5117, Escherichia coli ATCC 11230, Salmonella enterititis ATCC 13076 by microdilution and disc diffusion methods. Antimicrobial activity of the aromatic disulfonamides decreased as the length of the carbon chain increased. An analysis of the structure- activity relationship (SAR) along with computational studies showed that the most active compound (9) possessed low lipophilicity (AlogP=0.59) and high solubility (logS = -1.33).     

Synthesis, properties and crystal structures of new binuclear lead(II) complexes based on phenyl, naphthyl-containing fluorine β-diketones and substituted 2,2′-bipyridines

Four lead(II) complexes with substituted 2,2′-bipyridine adducts and β-diketonates ligands, [Pb(5,5′-dm-2,2′-bpy)(tfpb)₂]₂1, [Pb(4,4′-dmo-2,2′-bpy)(tfpb)₂]₂2, [Pb(4,4′-dm-2,2′-bpy)(tfnb)₂]₂3 and [Pb(5,5′-dm-2,2′-bpy)(tfnb)₂]₂4, (“4,4′-dm-2,2′-bpy”, “5,5′-dm-2,2′-bpy”, “4,4′-dmo-2,2′-bpy”, “Htfpb” and “Htfnb” are the abbreviations of 4,4′-dimethyl-2,2′-bipyridine, 5,5′-dimethyl-2,2′-bipyridine, 4,4′-dimethoxy-2,2′-bipyridine, 4,4,4-trifluoro-1-phenyl-1,3-butanedione and 4,4,4-trifluoro-1-(2-naphthyl)-1,3-butanedione, respectively) have been synthesized and characterized by elemental analysis, IR, ¹H NMR and ¹³C NMR spectroscopy and also studied by thermal and electrochemical as well as X-ray crystallography. The supramolecular features in these complexes are guided/controlled by weak directional intramolecular interactions.     

Synthesis and structure of the complex tetra-μ-prolinatodirhodium(II)

The dinuclear Rh^IIRh^II complex with proline [Rh₂(pro₄][NEt₄]₂ was synthesized and its structure studied by means of spectroscopic (IR, EPR and ESCA) and magnetochemical methods. It was shown that two proline molecules serve as bridging ligands, while the other two are only axially coordinated through their N atoms.