Long‐term regeneration of a tropical plant community after sand mining

Sandy coastal plant communities in tropical regions have been historically under strong anthropic pressure. In Brazil, these systems shelter communities with highly plastic plant species. However, the potential of these systems to regenerate without human assistance after disturbances has hardly been examined. We determined the natural regeneration of a coastal sandy plain vegetation (restinga) in Brazil, 16 years after the end of sand removal. We inventoried 38 plots: 20 within a sand‐mined site and 18 in an adjacent undisturbed site. We expected lower diversity values in the sand‐mined site compared to the undisturbed site, but similar species composition between the two sites due to the spatial proximity of the two sites and the high plasticity of restinga species. Species were ranked using abundance and importance value index in both sites, and comparisons were performed using Rényi entropy profiles, rarefaction curves, principal component analysis, and redundancy analysis. Species composition and dominant species differed markedly between the two sites. Bromeliads and Clusia hilariana, well‐known nurse plants, dominated the undisturbed site but were almost absent in the regenerating site. Species richness did not differ between both sites, but diversity was higher in the undisturbed site. Within‐site composition differences in the mined area were associated with field characteristics. Interestingly, species classified as subordinate or rare in the undisturbed site became dominants in the regenerating site. These newer dominants in the sand‐mined site are not those known as nurse plants in other restingas, thus yielding strong implications for restoration.     

木林子大样地两个木姜子属物种空间分布格局及关联性

该文以湖北木林子国家级自然保护区15 hm2大样地同属物种[木姜子(Litsea pungens)和黄丹木姜子(L.elongata)]为研究对象,通过成对相关函数和不同零模型(完全空间随机模型、异质泊松模型和先决条件模型)的方法分析两个物种的空间分布格局、种内和种间空间关联性,从同属物种的空间分布格局角度探讨群落的构...     

Habitat specialization and phylogenetic structure of tree species in a coastal Brazilian white-sand forest

Aims The coastal Brazilian rainforest on white-sand (restinga) ranks among the most fragmented forest types in the tropics, owing to both the patchy distribution of sandy soils and widespread coastal development activities. Here we study the environmental and evolutionary determinants of a forest tree assemblage at a single restinga forest in Southeastern Brazil. We also explore the ability of competing hypotheses to explain the maintenance of species diversity in this forest type, which includes contrasting extremes of edaphic conditions associated with flooding stress.Methods The study was conducted in a white-sand forest permanent plot of 10.24 ha on the coastal plain of Southeastern Brazil. This plot was divided into 256 quadrats of 20×20 m, which were classified into two main edaphic habitats (flooded and drained). Trees with a diameter ≥1cm at breast height were identified. We assembled DNA sequence data for each of the 116 morphospecies recognized using two chloroplast markers (rbcL and matK). A phylogenetic tree was obtained using the maximum likelihood method, and a phylogenetic distance matrix was produced from an ultrametric tree. We analyzed similarity in floristic composition and structure between habitats and related them to cross-plot distances using permutation procedures. Null model torus shift simulations were performed to obtain a statistical significance level for habitat association for each species. The phylogenetic structure for the two habitats and for each 20×20 m quadrat was calculated using the mean phylogenetic distance weighted by species abundance and checked for significance using the standardized effect size generated by 5000 randomizations of phylogenetic tip labels.Important findings Our results indicate that partitioning among edaphic habitats is important for explaining species distributions and coexistence in restinga forests. Species distributions within the plot were found to be non-random: there was greater floristic similarity within than between habitats, and>40% of the more abundant species were positively or negatively associated with at least one habitat. Patterns of habitat association were not independent of phylogenetic relatedness: the community was overdispersed with respect to space and habitat type. Closely related species tended to occur in different habitats, while neighboring trees tended to belong to more distantly related species. We conclude that habitat specialization is important for the coexistence of species in restinga forests and that habitat heterogeneity is therefore an essential factor in explaining the maintenance of diversity of this unique but fragile and threatened type of forest.     

Identifying the patterns of changes in α‐ and β‐diversity across Dacrydium pectinatum communities in Hainan Island,China

Exploring vegetation distribution spatial patterns facilitates understanding how biodiversity addresses the potential threat of future climate variability, especially for highly diverse and threatened tropical plant communities, but few empirical studies have been performed. Dacrydium pectinatum is a constructive and endangered species in the tropical mountain forests of Hainan Island, China. In this study, sixty‐eight 30 m × 30 m permanent plots of D. pectinatum were investigated, and species‐based and phylogenetic‐based methods were used to analyze the α‐ and β‐diversity pattern variation and its key drivers. Our study showed that species and phylogenetic α‐diversity patterns are different on a local scale. However, on a regional scale, the variations in the two α‐diversity patterns tend to converge, and they decrease with increasing elevation. The phylogenetic structure changes from overdispersion to convergence with increasing elevation. Soil (SOM, TP, AP), topography (EL, SL), and stand (CD) factors and α‐diversity showed close correlations. Species and phylogenetic β‐diversity have significant positive correlations with changing environmental distance and geographical distance; however, as a representative form of habitat heterogeneity, elevation distance has a greater impact on β‐diversity changes than geographical distance. In conclusion, the α‐ and β‐diversity patterns of the D. pectinatum community are mainly related to habitat filtering, especially in high‐elevation areas, and the colonization history of various regions also affects the formation of diversity patterns. Species‐based and phylogenetic‐based methods robustly demonstrated the key role of the habitat filtering hypothesis in community assembly. We believe that more plant diversity patterns need to be explored to understand the biodiversity formation mechanisms in tropical forests. We also recommend strengthening the construction and management of nature reserves to help address the biodiversity loss crisis in endangered tropical plant communities.     

Tree species compositional change and conservation implications in the white‐water flooded forests of the Brazilian Amazon

Aim The aim of this study was to use compositional changes in tree species along the Amazon River floodplain in Brazil to identify and characterize biogeographic regions that would serve as broad surrogates for conservation planning. Location The main course of the Amazon River in Brazil, covering a river distance of approximately 2800 km. Methods Two sampling methods were employed at specific sites: standardized transects and/or individual‐based samples. Seventy‐three samples were collected from 26 sites at approximately 100‐km intervals along the floodplain. Biogeographic regions were identified by non‐metric multidimensional scaling (NMDS) ordination and by a hierarchical cluster analysis. The relative influence of environmental components (flood depths, annual rainfall, and length of the dry season) on tree species composition and one spatial component (longitude) were analysed by multiple regressions against a one‐dimensional NMDS ordination axis. Results Based on tree species composition, three main biogeographic regions were identified: a western region between Tabatinga and the Negro River confluence; a central region from the Negro River confluence to the Xingu confluence; and an estuarine region from the Xingu confluence to Santana. The regions identified were consistent using different data sets and analytical techniques. Mixed environmental and spatial effects explained most of the variation, but the spatial effect alone had a greater influence on species composition than environmental effects alone. Main conclusions The regions delimited in the analyses differed from those based on geomorphology or World Wildlife Fund (WWF) ecoregions. These results reinforce the need for surrogates to be tested against biological data before they are used to shape approaches to conservation planning. Although a protected area coverage of 25% gives the impression of extensive conservation management on the floodplain, less than 1% of the Amazon’s floodplain in Brazil is strictly protected. The significant compositional differences between regions and the strong spatial variation along the Amazon indicate that strict protection areas should be distributed much more evenly within and between regions.     

Coexistence of two congeneric tree species of Lauraceae in a secondary warm‐temperate forest on Miyajima Island,south‐western Japan

We analyzed the spatial distributions of two congeneric tree species, Neolistea aciculata and Neolistea sericea (Lauraceae), in a warm‐temperate forest on Miyajima Island, south‐western Japan. Both species were mainly found in valley sites on the island. Hence, these species shared the same topographic habitat niche. However, we found a clear difference between the spatial distributions of the two species in relation to the light environment. Neolistea aciculata was predominantly found in stands with low light, such as beneath the canopy of dense evergreen broadleaved forest. In contrast, N. sericea was predominantly associated with ample light, such as in secondary Pinus densiflora forest. In stands with moderate light conditions, both species were found. This habitat niche segregation in relation to light conditions presumably allows the coexistence of these two species in the predominantly successional forest on Miyajima Island.     

Habitat filtering not dispersal limitation shapes oceanic island floras: species assembly of the Galápagos archipelago

Remote locations, such as oceanic islands, typically harbour relatively few species, some of which go on to generate endemic radiations. Species colonising these locations tend to be a non‐random subset from source communities, which is thought to reflect dispersal limitation. However, non‐random colonisation could also result from habitat filtering, whereby only a few continental species can become established. We evaluate the imprints of these processes on the Galápagos flora by analysing a comprehensive regional phylogeny for ~ 39 000 species alongside information on dispersal strategies and climatic suitability. We found that habitat filtering was more important than dispersal limitation in determining species composition. This finding may help explain why adaptive radiation is common on oceanic archipelagoes – because colonising species can be relatively poor dispersers with specific niche requirements. We suggest that the standard assumption that plant communities in remote locations are primarily shaped by dispersal limitation deserves reconsideration.     

Environment is more relevant than spatial structure as a driver of regional variation in tropical tree community richness and composition

Background: Understanding how factors related to environment and geographical distance explain community variation allows insights about how ecological niche and neutral processes control tropical community assembly.

Aims: Quantify how variation in regional tree community richness and composition in a humid tropical forest across a mountain chain are related to niche and putative neutral processes.

Methods: We used a variation partitioning routine based on Redundancy Analysis to model tropical tree community richness and composition within three distinct elevation belts, as a function of environment and spatial structure, using data from 32 studies in the Serra do Mar Range, south-eastern Brazil.

Results: Environmental effects were greater than spatial structure effects to explain community variation in the three elevation belts. There was a trend of decreasing spatial structure effects while environmental effects remained constant from lower to higher elevations. Patterns were congruent for species richness and composition.

Conclusions: We suggest that on tropical mountains, niche-related processes are equally relevant for tropical forest community assembly at all elevations, while neutral processes become weaker towards higher elevations. Determining if this trend is a consequence of the greater heterogeneity of environmental conditions associated with higher elevations in tropical mountainous terrain remains an important area of research.     

Aggregated spatial distributions of species in a subtropical karst forest,southwestern China

Aims Spatial distribution patterns of species reflect not only the ecological processes but also the habitat features that are related to species distribution. In karst topography, species distribution patterns provide more specific information about their environments. The objectives of this study are as follows: (i) to analyse and explain the spatial distribution patterns of conspecific trees in an old-growth subtropical karst forest; (ii) to investigate pattern changes at different spatial scales; (iii) to test the spatial pattern similarity (or dissimilarity) between trees at different abundances, diameter at breast height classes, canopy layers and different functional groups (shade tolerance and seed dispersal mode); (iv) to examine whether habitat heterogeneity has an important effect on the species spatial distribution.Methods The spatial distributions of woody species with ≥20 individuals in a 1-ha subtropical karst forest plot at Maolan in southwestern China were quantified using the relative neighbourhood density Ω based on the average density of conspecific species in a circular neighbourhood around each species.Important findings Aggregated distribution is the dominant pattern in the karst forest, but the ratio of aggregated species in total species number decreases with an increase in spatial scale. Less abundant species are more aggregated than most abundant species. Aggregation is weaker in larger diameter classes, which is consistent with the prediction of self-thinning. Seed dispersal mode influences spatial patterns, with species dispersed by animals being less aggregated than those dispersed by wind and gravity. Other species functional traits (e.g. shade tolerance) also influence the species spatial distributions. Moreover, differences among species habitat associations, e.g. with rocky outcrops, play a significant role in species spatial distributions. These results indicate that habitat heterogeneity, seed dispersal limitation and self-thinning primarily contribute to the species spatial distributions in this subtropical karst forest.     

Fish species diversity in sand bank habitats of a neotropical river

The fish fauna of the Cinaruco River, an intermediate sized floodplain river that forms the southern boundary of the newly established Santos Luzardo National Park in the llanos of Venezuela, was sampled in 1993-1994. Due to highly seasonal rainfall, the nutrient-poor Cinaruco undergoes dramatic changes in water level, creating a variety of seasonally available habitats for fishes. Sand bank habitats are conspicuous features in both main-channel and lentic backwater areas, and support fish assemblages that are different from adjacent rocky shore and shrubby shore habitats. Seine samples from sand bank habitats revealed high alpha diversity, dominated numerically by a few species of small Characiformes. Comparisons among and between lagoon, side-channel, and main-channel sand bank habitats showed little assemblage similarity. Overall, sand bank habitats were used by 8 orders, 21 families, and 105 species of fish, mostly of size classes less than 100 mm. Several species are currently undescribed. Elements which may contribute to high fish diversity include proximity to a diverse Amazonian fauna, seasonally dynamic habitat availability, the influence of keystone predators, and episodes of intermediate disturbance, such as seasonal release from intense biotic interactions.     

Effects of the occurrence of a cyclone and the dominance of a bamboo species on the dynamics of subtropical forest fragments

With the intensification of global warming, the occurrence of large‐scale natural events is becoming even more common in tropical regions, which can impact the structure of plant communities. In this study, we evaluated the isolated and combined effects of an extratropical cyclone and the dominance of a native bamboo species (Merostachys skvortzovii) on floristic composition, diversity, demographic rates and the increment of trees in Atlantic Forest fragments in Southern Brazil. In 2014 (T1) and 2016 (T2), we sampled 56 plots of 200 m² for the effects of an extratropical cyclone in 2009 (T0). We also evaluated another 60 plots of the same size not in the direct path of this cyclone. Half of the plots in each group were covered by dense groupings of bamboos, as a result of past human activities, which could potentially limit natural regeneration. We observed an increase in richness and diversity indices (H′ and 1/D) from the first (T0) to the following assessments (T1 an T2) on the sites affected by the cyclone, when compared to non‐affected sites. After the cyclone, both density and basal area they decreased, but there was an increase in recruitment, mortality, turnover rates and basal area, as well as basal increment. The diameter increment on surviving individuals was higher in cyclone‐affected sites than in non‐affected sites. Bamboo cover did not affect richness or demographic rates (except mortality between T0 and T1). Natural impacts of this nature can lead to significant alterations of demographic rates, allowing the input of new species and influencing the pace of demographic processes.     

Habitat use of the white‐headed langurs in limestone forest of Southwest Guangxi,China: Seasonality and group size effects

Understanding how animals cope with habitat‐specific environmental factors can assist in species conservation management. We studied the habitat use of four groups (two large and two small groups) of white‐headed langurs (Trachypithecus leucocephalus) living in the forest of southwest Guangxi, China between September 2016 and February 2017 via instantaneous scan sampling. Our results showed that the langurs primarily used hillsides (55.91% ± 6.47%), followed by cliffs (29.70% ± 5.48%), hilltops (7.26% ± 3.55%), flat zones (6.99% ± 6.58%), and farmlands (0.14% ± 0.28%). The langurs moved most frequently on hillsides (49.35% ± 6.97%) and cliffs (35.60% ± 9.17%). The hillsides were more frequently used (66.94% ± 7.86%) during feeding, and the langurs increased the use of hilltops during the rainy season, and the use of cliffs in the dry season. The langurs frequently rested on hillsides (49.75% ± 8.16%) and cliffs (38.93% ± 8.02%). The larger langur group used cliffs more frequently when moving and resting, whereas the small langur group used hillsides more frequently while resting. Langurs in all groups avoided the flat zones for feeding. Their use of habitat reflected the balancing of foraging needs, thermoregulation, and predator avoidance. We conclude that the ecological factors are determinants of habitat use for white‐headed langurs. Our findings suggest that conservation efforts should focus on protecting the vegetation on the hillsides and restoring the vegetation on the flat zones.     

Predicting the potential distribution and forest impact of the invasive species Cydalima perspectalis in Europe

Invasive species have considerably increased in recent decades due to direct and indirect effects of ever‐increasing international trade rates and new climate conditions derived from global change. We need to better understand how the dynamics of early species invasions develop and how these result in impacts on the invaded ecosystems. Here we studied the distribution and severe defoliation processes of the box tree moth (Cydalima perspectalis W.), a tree defoliator insect native to Asia and invasive in Europe since 2007, through the combination of species distribution models based on climate and landscape composition information. The results showed that the combination of data from the native and the invaded areas was the most effective methodology for the appropriate invasive species modeling. The species was not influenced by overall landscape factors, but only by the presence of its host plant, dispersal capacity, and climate suitability. Such climate suitability was described by low precipitation seasonality and minimum annual temperatures around 0°C, defining a continentality effect throughout the territory. We emphasize the need of studying distribution and severe defoliation processes separately because we identified that climate suitability was slightly involved in limiting species spread processes but strongly constrained ecosystem impact in terms of defoliation before the species reaches equilibrium with the new environment. New studies on habitat recovery after disturbance, ecological consequences of such impact, and community dynamics in a context of climate change are required for a better understanding of this invasive species.     

Coexistence and geographical distribution of Leguminosae in an area of Atlantic forest in the semi‐arid region of Brazil

Abstract Understanding the factors that affect plant species distribution and coexistence in areas with high plant species diversity is a challenge for ecologists. According to some authors, species occupy specific niches, but for others, species coexistence and geographical distribution patterns are random. Floristic composition of the family Leguminosae was studied on moist and dry slopes of the Baturité mountains in semi‐arid northeastern Brazil and was compared with findings for other plant formations elsewhere in Brazil. Substantial floristic differences were found between the moist windward and dry leeward slopes of the Baturité mountains despite their close geographical proximity. The leeward slope was slightly more diverse than the windward slope. Similarity analyses showed that the windward face is floristically allied to the Amazon forest, whereas the leeward slope is similar to other dry‐area formations of northeastern Brazil, such as thorny woodland (caatinga) and seasonal forests. The strong floristic differences that were observed between the windward and leeward slopes corroborate the theory of ecological niche conservatism, which holds that species occurrence is closely linked to environmental factors, such as temperature and precipitation.     

Community characteristics and spatial distribution of dominant tree species in a deciduous broad-leaved forest of Muzhaling,Henan, China

Aims The objective of this paper is to quantify the species composition and spatial distribution pattern in a deciduous broad-leaved forest in temperate to subtropical ecological transition zone.
Methods In this study, a 3-hm² forest was selected in the temperate to subtropical ecological transition zone to analyze the community species composition, structure of diameter at breast height, community classification and spatial distribution pattern of dominant tree species.
Important findings Our results showed that in the plot there were 85 species, 52 genera and 31 families, mainly composed of Betulaceae, Celastraceae, Caprifoliaceae, Salicaceae and Aceraceae. Quercus aliena var. acuteserrata and Pinus armandii are dominant species of the community tree layer. The rare species and occasional species accounted for 20.0% and 28.24% of total species respectively. Size distribution of all species showed an invert J-shape, which indicates that the community is in a stable and normal growth status. Using multiple regression trees, the community in this plot can be divided into four categories: 1) Quercus aliena var. acuteserrata + Pinus armandii + Litsea tsinlingensis + Cerasus clarofolia + Lindera obtusiloba; 2) Quercus aliena var. acuteserrata + Salix chaenomeloides + Sorbus hupehensis; 3) Quercus aliena var. acuteserrata + Ailanthus altissima + Cerasus clarofolia + Litsea tsinlingensis; 4) Quercus aliena var. acuteserrata + Fraxinus chinensis + Litsea tsinlingensis + Philadelphus incanus. Under the completely random distribution model, the main species in the plot display clustered distributions, with the different species occurring in different habitat types, showing obvious terrain habitat preferences. However, under the heterogeneous Poisson distribution model, these species at different scales are distributed randomly or regularly. This study helps to understand the plant community species composition of the Muzhaling World Geopark, community structure and community distribution. The results show that the terrain habitat heterogeneity is an important factor influencing the spatial distribution of the species. The present work improves the understanding of plant community in Muzhaling World Geopark, and provides technical reference for biodiversity conservation and forest management of this area.     

河南木札岭温带落叶阔叶林群落特征及主要乔木空间分布格局

以木札岭世界地质公园3 hm²的温带落叶阔叶林为研究对象, 分析了群落的物种组成、胸径结构、群落分类和主要物种的空间分布格局。结果显示: 样地内共有木本植物31科52属85种, 以蔷薇科、桦木科、卫矛科、忍冬科、杨柳科和槭树科为主, 锐齿槲栎(Quercus aliena var. acuteserrata)和华山松(Pinus armandii)为群落内优势种, 稀有种和偶见种分别占总物种数的20.0%和28.24%。物种径级分布遵从典型的倒“J”型, 植物群落更新状况良好。多元回归树经过交叉验证认为可将该样地划分为4个群落类型: 1)锐齿槲栎+华山松+秦岭木姜子(Litsea tsinlingensis) +微毛樱桃(Cerasus clarofolia) +三桠乌药(Lindera obtusiloba)群落; 2)锐齿槲栎+腺柳(Salix chaenomeloides) +湖北花楸(Sorbus hupehensis)群落; 3)锐齿槲栎+臭椿(Ailanthus altissima) +微毛樱桃+秦岭木姜子群落; 4)锐齿槲栎+白蜡(Fraxinus chinensis) +秦岭木姜子+山梅花(Philadelphus incanus)群落。在完全随机分布模型下, 样地中主要物种在整个研究尺度中全部呈聚集分布, 并且这些物种主要聚集分布在不同的生境中, 具有明显的地形生境偏好;在异质性泊松分布模型下, 这些物种在不同尺度上主要呈随机分布或规则分布。该研究结果表明地形生境异质性是影响木札岭样地物种空间分布的重要因素。通过该研究可增加对木札岭世界地质公园植物组成、群落结构和群落分布的认识, 同时可为该区域生物多样性保护和森林管理提供参考。     

Gap-phase regeneration in a tropical montane forest: the effects of gap structure and bamboo species

To study the influence of gap structure and bamboo species on the regrowth of montane Atlantic forest, colonization by plants was characterized in 30 treefall gaps (30.3–500.5 m²). The study was conducted at Santa Virgínia (45°30 W, 23°17 S), a 4970-ha reserve of Atlantic montane forest in southeastern Brazil. Area covered by bamboos ranged from 0% to 100% of gap area. Average height of surrounding canopies ranged from 12 to 30 m. As gap are covered by bamboo and average height of surrounding canopies increased, both density and richness of pioneer woody species decreased. Density and richness of shade-tolerant species were negatively influenced by gap area. Low-light-demanding species of Miconia, Leandra and Rapanea accounted for the majority of both pioneer species and individuals sampled, whereas high-light demanding pioneers of Cecropia, Alchornea and Tibouchina were poorly represented. We suggest that in the Atlantic montane forest bamboo species compete for gaps, excluding other light-demanding pioneers. This results in an overall reduction of pioneer species richness in the Atlantic forest.     

Impact of logging on the richness and diversity of forest butterflies in a tropical dry forest in Thailand

Studies on the impact of logging on tropical forest butterflies have been almost exclusively conducted in moist forest habitats. This study considers the impacts of small-scale logging on butterfly communities at three sites of varying disturbance intensity in a tropical dry forest in western Thailand. Butterfly species richness was similar at all sites, but the abundance of butterflies and diversity of the butterfly community decreased with increased logging disturbance. The recorded decrease in diversity at the relatively large sampling scale used lends further support to the hypothesis that disturbance effects are scale dependent. Species abundance data for butterflies fitted a log-normal distribution at all sites, but also a log-series distribution at the two disturbed sites. These analyses suggest a more complex butterfly community at the undisturbed site, but also that log-series and log-normal distributions may not to be sufficiently sensitive to be useful indicators of community changes following logging. Community ordination separates both the butterfly species and transect samples into three distinct regions corresponding to the three study locations. Ordination axes are correlated with tree density, understorey cover and understorey plant richness. Species with the smallest geographic ranges tend to be the least abundant and occurred most frequently in the undisturbed site. The observed diverging responses to disturbance among butterfly families diminishes the value of butterfly communities as biodiversity indicators, and forest managers should perhaps focus on restricted range species or of groups of recognized sensitive species for this purpose.