板栗疫病菌中一个依赖于经典分泌途径的无信号肽分泌蛋白的鉴定

依赖于内质网/高尔基体的经典分泌途径是胞外分泌的主要途径。传统上认为,经典分泌途径所分泌的蛋白,通常都具有信号肽和高尔基体定位信息。经典分泌途径分泌蛋白由内质网向高尔基体运输,需要COPI小泡作为载体,而布雷非德菌素A(BFA)可以抑制COPI被膜小泡的形成,最终阻断分泌蛋白由内质网向高尔基体的运输。为建立一个简便的鉴别经典分泌途径分泌蛋白的方法,本研究从板栗疫病菌(Cryphonectria parasitica)分泌蛋白组数据库中选择一个不具有信号肽、跨膜区和高尔基体定位信息的氧化还原酶(POR),通过构建POR-GFP融合蛋白,观察其在野生型菌株和在受BFA处理菌株中的细胞定位,发现该融合蛋白的细胞内分布在野生型菌株呈弥散型分布,而在BFA处理菌株时呈聚集型分布,表明其在细胞内由内质网到高尔基体的运输受到了抑制。该结果表明,POR的分泌依赖于经典分泌途径,属于经典途径分泌蛋白。因此,GFP融合蛋白结合BFA处理可以准确鉴定经典途径分泌蛋白。     

糖蛋白折叠质量的监控机制

内质网是一种重要的真核细胞器,糖蛋白的糖基化开始于其中.在内质网中永久性折叠错误糖蛋白或幼稚型糖链糖蛋白,以及突变的糖蛋白被阻止进入高尔基体,而是选择性地被运到胞质,然后在蛋白酶体中被降解.至少两大分子伴侣家族结合蛋白（BiP）和钙联结蛋白（CNX）/钙网蛋白（CRT）参与了糖蛋白折叠的质量控制过程.     

药物分子伴侣: 蛋白质折叠运输缺陷的新疗法

大量遗传性疾病的发生是由于基因突变引起蛋白质错误折叠而不能运输到作用位点,从而导致功能缺陷．近年来兴起的药物分子伴侣是恢复蛋白质折叠运输缺陷的新疗法,这类化合物一般为目的蛋白的底物类似物、受体配基或酶抑制剂等化学小分子,具细胞通透性,能在内质网中特异性识别并结合突变蛋白,校正并稳定其正确构象,协助其运输到正确位点,直接恢复突变蛋白功能,可治疗各种南蛋白质折叠运输缺陷导致的内分泌及代谢疾病．目前已报道的由药物分子伴侣恢复功能的突变蛋白主要为质膜蛋白及细胞器蛋白,如ATP结合盒转运蛋白、G-蛋白耦联受体及溶酶体酶等．大量的细胞及动物实验结果显示了药物分子伴侣的临床应用前景广阔,目前已有一例临床实验获得了成功．     

分子伴侣参与调控动、植物的发育和进化进程

近年来, 人们对分子伴侣的功能研究取得了很大进展, 阐明了它参与细胞新合成蛋白多肽的折叠、组装、运输和蛋白质的降解过程。在这些过程中, 伴随着分子伴侣表达量的高低变化, 细胞线粒体数量也会发生相应的变化。文章综述了分子伴侣参与调控动、植物的发育和进化进程, 如: 动、植物育性调控, 抗逆境能力提高及热休克蛋白-多肽复合物的肿瘤免疫治疗探索等。     

分子伴侣研究概况

分子伴侣主要是在进化上高度保守的热休克蛋白的几个家族。从细菌到哺乳动物,分子伴侣对体内蛋白质的折叠、运输和组装都起到非常重要的作用。本文简要地概述了分子伴侣的组成、它们在蛋白质折叠中的作用以及它们在生物工程下游处理过程中的应用情况。     

保守GTP酶ObgE的分子伴侣活性研究

分子伴侣(molecular chaperone)能够帮助新生多肽链或错误折叠的蛋白质形成天然构象,但本身又不是成熟蛋白质的组成成分。蛋白质需要分子伴侣的帮助,才能够从核糖体合成的新生肽链折叠成有生物活性的大分子。E.coli的ObgE蛋白是保守的GTP酶,ObgE蛋白参与信号转导、蛋白运输和细胞周期调控,并与E.coli在氨基酸饥饿下的应激反应有关。本实验通过分子克隆,将E.coli ObgE蛋白的基因克隆到表达载体pET-28a中,转化到E.coli BL21进行蛋白表达纯化。纯化后的ObgE蛋白通过柠檬酸合成酶变复性实验、α-葡萄糖苷酶变复性实验、牛碳酸酐酶变复性实验,检测ObgE蛋白的分子伴侣活性,发现ObgE具有一定的分子伴侣活性,为该蛋白的研究应用奠定了基础。     

J蛋白研究进展

J蛋白（J-domain protein）是一类分子中含有J结构域的蛋白质大家族,大部分J蛋白具有分子伴侣的功能。J蛋白作为热休克蛋白70（HSP70）的同伴蛋白与HSP70组成分子伴侣机器,参与蛋白质分子折叠、组装、转运以及信号转导等多种细胞过程。此外,J蛋白在植物对环境胁迫的反应及其他生理过程中起重要作用。     

内质网-高尔基体中间体功能研究进展

内质网-高尔基体中间体(ERGIC)的发现来自于对病毒蛋白胞内转运的研究.最初认为ERGIC是内质网和高尔基体之间的膜泡运输分选站,主要调控早期分泌途径中的货物分选及双向运输.随着研究的深入,发现ER-GIC在细胞应激条件下发挥其他重要细胞学功能,包括在自噬过程中调控早期自噬体膜的形成,以及在非经典蛋白分泌途径中扮演蛋...     

包被蛋白COPI在ER/Golgi小泡运输中的作用

COPI包被小泡在早期分泌途径中介导蛋白质和脂类的正确运输,COPI包被小泡还被认为介导胞吐途径中多种不同的运输和细胞内加工过程。本文就COPI包被小泡的作用及小泡出芽、货物包装、小泡释放的机理作一综述。     

蛋白的高尔基体定位

高尔基体既是蛋白质修饰、分选、水解加工的场所,又是分泌物质的转运站,每时每刻都有大量的蛋白进出高尔基体。在这种情况下,高尔基体仍能保持完整且高度有序的结构,表明高尔基体驻留蛋白有精确的定位信号,以保证它们定位于正确的区隔,而不会沿着分泌途径被运输出去。高尔基体内有几种不同类别的膜蛋白,包括糖基转移酶、周缘膜蛋白、病毒蛋白和受体等。研究显示,有多种定位信号和定位机制参与了蛋白的高尔基体定位。     

Export of a cysteine-free misfolded secretory protein from the endoplasmic reticulum for degradation requires interaction with protein disulfide isomerase

Protein disulfide isomerase (PDI) interacts with secretory proteins, irrespective of their thiol content, late during translocation into the ER; thus, PDI may be part of the quality control machinery in the ER. We used yeast pdi1 mutants with deletions in the putative peptide binding region of the molecule to investigate its role in the recognition of misfolded secretory proteins in the ER and their export to the cytosol for degradation. Our pdi1 deletion mutants are deficient in the export of a misfolded cysteine-free secretory protein across the ER membrane to the cytosol for degradation, but ER-to-Golgi complex transport of properly folded secretory proteins is only marginally affected. We demonstrate by chemical cross-linking that PDI specifically interacts with the misfolded secretory protein and that mutant forms of PDI have a lower affinity for this protein. In the ER of the pdi1 mutants, a higher proportion of the misfolded secretory protein remains associated with BiP, and in export-deficient sec61 mutants, the misfolded secretory protein remain bounds to PDI. We conclude that the chaperone PDI is part of the quality control machinery in the ER that recognizes terminally misfolded secretory proteins and targets them to the export channel in the ER membrane.     

Building a secretory apparatus: role of ARF1/COPI in Golgi biogenesis and maintenance

 The secretory apparatus within all eukaryotic cells comprises a dynamic membrane system with bidirectional membrane transport pathways and overlapping compartmental boundaries. Membrane traffic and organelle biogenesis/maintenance are fundamentally linked within this system, with perturbations in membrane traffic quickly leading to changes in organelle structure and identity. Dissection of the molecular basis of these properties in yeast and mammalian cells has revealed a crucial role for the cytoplasmic protein complex ARF1/COPI, which undergoes regulated assembly and disassembly with membranes. ARF1/COPI appears to be involved in the formation and maintenance of the Golgi complex, which is the receiving and delivery station for all secretory traffic. ARF1-GTP, through assembly of COPI to membranes and, possibly, through activation of PLD, is likely to promote the formation and maturation of pre-Golgi intermediates into Golgi elements, whereas ARF-GDP causes COPI dissociation and stimulates the formation of retrograde transport structures that recycle Golgi membrane back to the ER. These processes are appear to underlie the coupling of organelle biogenesis and membrane trafficking within cells, allowing the size and shape of secretory organelles to be altered in response to changing cellular needs. Future work needs to address how the activation and localization of ARF1/COPI to membranes as well as other related factors are temporally and spatially regulated, and by what mechanism they transform membrane shape and dynamics to facilitate protein transport and compartmental functioning. Accepted: 23 March 1998     

Distinct retrieval and retention mechanisms are required for the quality control of endoplasmic reticulum protein folding.

Proteins destined for the secretory pathway must first fold and assemble in the lumen of endoplasmic reticulum (ER). The pathway maintains a quality control mechanism to assure that aberrantly processed proteins are not delivered to their sites of function. As part of this mechanism, misfolded proteins are returned to the cytosol via the ER protein translocation pore where they are ubiquitinated and degraded by the 26S proteasome. Previously, little was known regarding the recognition and targeting of proteins before degradation. By tracking the fate of several mutant proteins subject to quality control, we demonstrate the existence of two distinct sorting mechanisms. In the ER, substrates are either sorted for retention in the ER or are transported to the Golgi apparatus via COPII-coated vesicles. Proteins transported to the Golgi are retrieved to the ER via the retrograde transport system. Ultimately, both retained and retrieved proteins converge at a common machinery at the ER for degradation. Furthermore, we report the identification of a gene playing a novel role specific to the retrieval pathway. The gene, BST1, is required for the transport of misfolded proteins to the Golgi, although dispensable for the transport of many normal cargo proteins.     

Export of cyst wall material and Golgi organelle neogenesis in Giardia lamblia depend on endoplasmic reticulum exit sites

Giardia lamblia parasitism accounts for the majority of cases of parasitic diarrheal disease, making this flagellated eukaryote the most successful intestinal parasite worldwide. This organism has undergone secondary reduction/elimination of entire organelle systems such as mitochondria and Golgi. However, trophozoite to cyst differentiation (encystation) requires neogenesis of Golgi‐like secretory organelles named encystation‐specific vesicles (ESVs), which traffic, modify and partition cyst wall proteins produced exclusively during encystation. In this work we ask whether neogenesis of Golgi‐related ESVs during G. lamblia differentiation, similarly to Golgi biogenesis in more complex eukaryotes, requires the maintenance of distinct COPII‐associated endoplasmic reticulum (ER) subdomains in the form of ER exit sites (ERES) and whether ERES are also present in non‐differentiating trophozoites. To address this question, we identified conserved COPII components in G. lamblia cells and determined their localization, quantity and dynamics at distinct ERES domains in vegetative and differentiating trophozoites. Analogous to ERES and Golgi biogenesis, these domains were closely associated to early stages ofnewly generated ESV. Ectopic expression of non‐functional Sar1 GTPase variants caused ERES collapse and, consequently, ESV ablation, leading to impaired parasite differentiation. Thus, our data show how ERES domains remain conserved in G. lamblia despite elimination of steady‐state Golgi. Furthermore, the fundamental eukaryotic principle of ERES to Golgi/Golgi‐like compartment correspondence holds true in differentiating Giardia presenting streamlined machinery for secretory organelle biogenesis and protein trafficking. However, in the Golgi‐less trophozoites ERES exist as stable ER subdomains, likely as the sole sorting centres for secretory traffic.     

Mechanisms of Intracellular Protein Transport and Targeting in Plant Cells

The specificity of protein targeting processes is the basis of maintaining structural and functional integrity of the cell, enabling the various subcellular compartments to carry out their unique metabolic roles. Studies in plants have progressed markedly in the last 5 years, and many of the specific signals involved in the transport and targeting of proteins to the nucleus, chloroplast, mitochondrion and microbody, and to organelles along the secretory pathway (endoplasmic reticulum [ER], Golgi complex, and vacuole) have been characterized. Exciting prospects include the identification of receptors involved in the recognition of protein targeting signals, mechanisms of vesicle targeting, and the role of mRNA targeting. Although important exceptions exist, a striking feature of the mechanisms and cellular machinery of protein targeting is their universality — among plants, animals, and eukaryotic microorganisms — and even between prokaryotes and eukaryotes. More information is required about the structural features of proteins that allow for their stable accumulation in a particular subcellular compartment, of particular interest to the plant genetic engineer. Our understanding of the rules that govern protein folding and oligomer assembly and how these processes relate to a protein's ultimate stability in the cell is limited.     

Drosophila arf72A acts as an essential regulator of endoplasmic reticulum quality control and suppresses autosomal-dominant retinopathy

The eukaryotic endoplasmic reticulum operates multiple quality control mechanisms to ensure that only properly folded proteins are exported to their final destinations via the secretory pathway and those that are not are destroyed via the degradation pathway. However, molecular mechanisms underlying such regulated exportation to these distinct routes are unknown. In this article, we report the role of Drosophila arf72A--the fly homologue of the mammalian Arl1 - in the quality checks of proteins and in the autosomal-dominant retinopathy. ARF72A localizes to the Golgi membranes of Drosophila photoreceptor cells, consistent with mammalian Arl1 localization in cell culture systems. A loss of arf72A function changes the membrane character of the endoplasmic reticulum and shifts the membrane balance between the endoplasmic reticulum and the Golgi complex toward the Golgi complex, resulting in over-proliferated Golgi complexes and accelerated protein secretion. Interestingly, our study indicated that more ARF72A localized on the endoplasmic reticulum in the ninaE(D1) photoreceptor cell, a Drosophila model of autosomal-dominant retinitis pigmentosa, compared to that in the wild-type. In addition, arf72A loss was shown to rescue the ninaE(D1)-related membrane accumulation and the rhodopsin maturation defect, and suppress ninaE(D1)-triggered retinal degeneration, indicating that rhodopsin accumulated in the endoplasmic reticulum bypasses the quality checks. While previous studies of ARF small GTPases have focused on their roles in vesicular budding and transport between the specific organelles, our findings establish an additional function of arf72A in the quality check machinery of the endoplasmic reticulum distinguishing the cargoes for secretion from those for degradation.     

Biosynthetic protein transport through the early secretory pathway

 Newly synthesized proteins destined for delivery to the cell surface are inserted cotranslationally into the endoplasmic reticulum (ER) and, after their correct folding, are transported out of the ER. During their transport to the cell surface, cargo proteins pass through the various cisternae of the Golgi apparatus and, in the trans-most cisternae of the stack, are sorted into constitutive secretory vesicles that fuse with the plasma membrane. Simultaneously with anterograde protein transport, retrograde protein transport occurs within the Golgi complex as well as from the Golgi back to the ER. Vesicular transport within the early secretory pathway is mediated by two types of non-clathrin coated vesicles: COPI- and COPII-coated vesicles. The formation of these carrier vesicles depends on the recruitment of cytosolic coat proteins that are thought to act as a mechanical device to shape a flattened donor membrane into a spherical vesicle. A general molecular machinery that mediates targeting and fusion of carrier vesicles has been identified as well. Beside a general overview of the various coat structures known today, we will discuss issues specifically related to the biogenesis of COPI-coated vesicles: (1) a possible role of phospholipase D in the formation of COPI-coated vesicles; (2) a functional role of a novel family of transmembrane proteins, the p24 family, in the initiation of COPI assembly; and (3) the direction COPI-coated vesicles may take within the early secretory pathway. Moreover, we will consider two alternative mechanisms of protein transport through the Golgi stack: vesicular transport versus cisternal maturation. Accepted: 24 October 1997     

Quality control in the secretory assembly line

As a rule, only proteins that have reached a native, folded and assembled structure are transported to their target organelles and compartments within the cell. In the secretory pathway of eukaryotic cells, this type of sorting is particularly important. A variety of molecular mechanisms are involved that distinguish between folded and unfolded proteins, modulate their intracellular transport, and induce degradation if they fail to fold. This phenomenon, called quality control, occurs at several levels and involves different types of folding sensors. The quality control system provides a stringent and versatile molecular sorting system that guaranties fidelity of protein expression in the secretory pathway.     

Protein quality control at the Golgi

The majority of the proteome in eukaryotic cells is targeted to organelles. To maintain protein homeostasis (proteostasis), distinct protein quality control (PQC) machineries operate on organelles, where they detect misfolded proteins, orphaned and mis-localized proteins and selectively target these proteins into different ubiquitin-dependent or -independent degradation pathways. Thereby, PQC prevents proteotoxic effects that would disrupt organelle integrity and cause cellular damage that leads to diseases. Here, we will discuss emerging mechanisms for PQC machineries at the Golgi apparatus, the central station for the sorting and the modification of proteins that traffic to the endo-lysosomal system, or along the secretory pathway to the PM and to the extracellular space. We will focus on Golgi PQC pathways that (1) retrieve misfolded and orphaned proteins from the Golgi back to the endoplasmic reticulum, (2) extract these proteins from Golgi membranes for proteasomal degradation, (3) or selectively target these proteins to lysosomes for degradation.     

Is There a COPII‐Mediated Membrane Traffic in Chloroplasts?

COPII proteins facilitate membrane transport from the endoplasmic reticulum (ER) to the Golgi. They are highly conserved, although there are variations in their subcellular localization across plant, animal and yeast cells. Such variations may be needed to suit the unique organization of the ER and Golgi in the different cell systems. Earlier bioinformatics analyses have indicated that the Arabidopsis nuclear genome may encode chloroplast isoforms of the cytosolic trafficking protein machineries, including COPI and COPII, for vesicular transport within chloroplasts. These analyses suggest the intriguing possibility that plants may have evolved or adapted COP-like proteins to suit membrane trafficking events within specialized organelles. Here, we discuss recent data on the distribution and activity of the product of the At5g18570 locus, which encodes a putative chloroplast isoform of Sar1, the GTPase that regulates COPII assembly on the surface of the ER. Evidence is accumulating that the protein is targeted to the chloroplasts, that it has GTPase activity and that it may have a role in thylakoid membrane development, supporting the possibility that COPII-like trafficking machinery may be active in chloroplasts.