Landscape, habitat characteristics and the genetic population structure of two caddisflies

1. In a region of south‐eastern England, we investigated the hierarchical genetic structure of populations of two stream‐dwelling caddisflies (Trichoptera: Polycentropodidae) with contrasting distributions: Plectrocnemia conspersa inhabits numerous small, patchily distributed seeps and streams, while the confamilial Polycentropus flavomaculatus is found in fewer but larger streams and rivers. We also contrasted the genetic structure of P. conspersa in the lowland south‐east with that in an upland region in the north west. 2. Microsatellite genotypes were obtained from samples of both species taken from a ‘core area’ and at sites 15, 40 and 100 km from this core (two regions for P. conspersa, totalling 45 sites and 1405 larvae; one region for P. flavomaculatus, totalling 10 sites and 269 larvae). 3. The genetic structure of P. conspersa differed in the two regions. In the upland north‐west, significant genetic differentiation was observed at a spatial scale of around 40 km from the core, while there was no structure in the lowland south‐east up to around 100 km. Areas of high altitude did not appear directly to reduce gene flow, whereas other potential landscape barriers, including particular geological formations, large urban areas and the sea had a pronounced effect. 4. Weak genetic differentiation in P. conspersa across large distances, particularly in the lowland south‐east, suggests that it disperses strongly, facilitating gene flow within and between catchments. Conversely, for P. flavomaculatus we found strong genetic differentiation between almost all sites, suggesting that dispersal is much more limited. 5. Greater dispersal in the patchily distributed P. conspersa than in P. flavomaculatus, which occupies larger and presumably more persistent habitats, could be a general feature of other similarly distributed aquatic insects. While higher relief is potentially a partial barrier to dispersal, P. conspersamust have effective gene flow through such apparently inhospitable terrain, perhaps attributable to dispersal between neighbouring small and ephemeral populations. Indeed, its exploitation of headwaters and seeps requires the ability to disperse between such sites. Apparently it cannot, however, overcome more continuous barriers, consisting of large tracts of landscape with few habitable larval sites. Such landscapes, including those created by humans, may have a stronger effect on population connectivity and colonization in the longer term.     

Experimental analysis of territory size in a population of the fire ant Solenopsis invicta

Alternative models of territoriality are based on contrastingassumptions about the behavioral processes determining territorysize. In a series of controlled field experiments on the fireant Solenopsis invicta, I tested whether territory size is affectedby the availability of food, as predicted by most economic models,and whether territory size is affected by fighting ability,as predicted by models of competition among neighbors. Abundantfood was offered for 30–35 days to selected colonies eitherimmediately next to the nest (experiment 1) or at peripheralsites near the territory boundary (experiment 2). These foodsupplements had no detectable effect on territory size. Furthermore,food placed near the periphery of the territory did not significantlyalter local boundary positions. During both experiments, largecolonies lost more territory than did small colonies, reflectingtemporary declines in worker number due to the seasonal productionof reproductives. Such losses by large colonies during the summermonths create opportunities for newly founded colonies to expandterritories. In a third experiment, colonies from which workerswere removed lost significantly more territory than did unmanipulatedcontrols. These results show that territory areas in S. invictaare strongly affected by the relative fighting ability of neighboringcolonies but provide no evidence that colonies adjust territoryarea in response to short-term changes in the availability offood.     

Strong habitat selection and the development of population structure in a mosquito

Summary Remarkably simple and regular patterns of genic variation for two electrophoretically assayed loci are presented against a background of strong habitat selection, population isolation, and population structuring in the pitcher-plant mosquitoWyeomyia smithii. The genic variation assessed thus far comes from 29 local populations, all but one of which lie within the glaciated region of North America. Although the conclusions drawn from these patterns are still quite tentative, it appears that the fact that the same higher frequency electromorphs occurred everywhere for both loci may be due more to selection than drift. Drift or selection, acting alone or in concert may be responsible for the almost complete absence of electromorphs of intermediate frequency. A weak association was found between the two-locus genic variation and the well-studied diapause-development time variation in this species. It is suggested that a Wrightian interaction system and fluctuating-stabilizing selection might account for maintenance of the genic level polymorphism. The observations reported are circumstantially in accord with Wright's shifting balance process of evolution. Future studies in the older parts of the species range will put these hypotheses to a strong test.     

Troop size,home range area and seasonal range use of the Japanese macaque in the Northern Japan Alps

Home range area and habitat use of the wild Japanese macaque (Macaca fuscata) were investigated between elevations of 600m and 3000m in the Northern Japan Alps, in areas where there is great variation in vegetation type. A total of 22 troops were located either visually or by radiotracking from December 1996 to February 2000. The average troop size was 48.4 individuals, the average ranging area (65% probability distribution calculated using the adaptive kernel method) was 3.7km² and the average elevation of each troop varied from 740m to 1458m. Two troop types were distinguished according to their habitat use: (i) rural type groups frequently utilized cultivated land (n=12); and (ii) natural type groups never utilized cultivated land (n=10). Natural groups inhabited higher elevation areas and showed a greater dependency on deciduous broad-leaved forests during all seasons. In contrast, rural groups utilized the larch plantation more in spring, and the red pine forest in summer. Rural groups were observed on cultivated lands more often from summer to winter than in spring. The size of the rural groups was twice as large as that of the natural groups. Troop size and home range area showed significant correlation within each group type. The per capita home range area of rural groups was smaller than that of natural groups. These results suggest that per capita home range area is negatively correlated with habitat quality.     

Population size, weight distribution and food in a persistent population of the rare medicinal leech, Hirudo medicinalis

1. It is important for species recovery and conservation management projects to know the minimum viable population size for rare and endangered species, such as the medicinal leech, Hirudo medicinalis. Therefore, using a catch‐removal method, this study estimated every two years (1986, 1988, 1990, 1992) the total number of medicinal leeches in a tarn in the English Lake District, and the number of mature adults in the population. 2. Four samples were taken each year in June and July, when water temperatures exceeded 20 °C. Population size was estimated both by maximum likelihood and regression methods. All leeches were weighed alive and size groups were separated by polymodal frequency analysis. A small sample of the blood meal in each leech gut was taken before the leeches were returned to the tarn, and was used to estimate the proportion of mammalian and non‐mammalian blood in the meals. 3. Both methods of estimation produced similar values, increasing confidence in the population estimates. Values for the total population in June and July varied among years from 248 to 288, the maximum value being only 16% higher than the minimum. Values for the number of mature leeches varied from 48 to 58 (19–20% of the total population), and this was an estimate of the effective population size. 4. There were four size groups. The largest mature leeches (live weight >5 g) in group IV formed only 1% of the population, and the smallest (0.02–0.5 g) in group I 14–17%. Most leeches were in two overlapping groups of immature (64–67% of population) and mature (18%) leeches with size ranges of 0.4–3.4 g and 2.5–5 g respectively. The percentage of leeches in each size group was very consistent among years. Blood meals were found in 38–44% of the leeches in group I, 45–50% in group II, 70–75% in group III, and 100% in group IV, but mammalian blood was present only in larger mature leeches (>3.5 g). 5. Medicinal leeches were first detected in the tarn in 1980 and are still present in 2007, so the population has persisted for at least 27 years. Compared with minimum viable population sizes for other species, including many endangered species, values for this medicinal leech population are extremely low, but may be typical of some rare freshwater invertebrates in isolated habitats.     

The influence of the ability to disperse on generation length and population size in the flour beetle, Tribolium castaneum

Abstract.

• 1 In Tribolium castaneum Herbst, in which dispersal is genetically determined, it is possible to select for strains that are characterized by high and low dispersal, High dispersal (HD) beetles are better adapted than low dispersal (LD) beetles for colonization, as can be seen from differences that exist between the two groups with regard to several life-history parameters.
• 2 Comparisons were made between the dynamics of seventy-two HD and seventy-two LD populations. Generation length in HD populations was significantly shorter than in LD populations. After 9¹/₂ weeks, in open treatments (from which dispersal away from the set was allowed), HD populations had more beetles than LD populations, whereas in closed treatments (from which dispersal away from the set was not allowed) the opposite was true.
• 3 These findings may explain the maintenance of the genetic variability of dispersal behaviour in natural populations of T.castmeurn.

     

Effect of forest fragment size on tree diversity and population structure of humid subtropical forest of Meghalaya,India

The present study was conducted in subtropical humid forests of Meghalaya to study the distributional pattern of species, floristic composition, community structure and tree population structure.Forest fragments of varying sizes(0.5 ha, 1 ha, 2 ha and 5 ha) were used in the study.All of the forest fragments are distributed within the same altitudinal range, and had similar rainfall and temperature regimes.Four forest fragments were sampled using random quadrats to analyze the impact of fragment size on tree...     

Estimating the population size of an endangered shorebird, the Madagascar plover, using a habitat suitability model

The Madagascar plover Charadrius thoracicus is a shorebird endemic to western Madagascar, currently classified as globally vulnerable. It is restricted to specialized wetland habitats that are increasingly threatened by humans. To inform future conservation measures for this poorly known species, we develop a predictive habitat suitability map and use this map to estimate the size of the Madagascar plover population. We integrate spatially referenced presence-only observations of Madagascar plovers with Landsat data, elevation data and measures of distance to settlements and the coast to produce a habitat suitability model using ecological niche factor analysis. Validation of this model using a receiver operating characteristic plot suggests that it is at least 84% accurate in predicting suitable sites. We then use our estimate of total area of suitable habitat above a critical suitability threshold and data on Madagascar plover density in suitable sites to estimate the total population size to derive a total population estimate of 3100±396 standard error individuals. Finally, we explore the conservation applications of our model.     

Estimation of effective population size and detection of a recent population decline coinciding with habitat fragmentation in a ground beetle

We assess the impact of habitat fragmentation on the effective size (N(e)) of local populations of the flightless ground beetle Carabus violaceus in a small (<25 ha) and a large (>80 ha) forest fragment separated by a highway. N(e) was estimated based on the temporal variation of allele frequencies at 13 microsatellite loci using two different methods. In the smaller fragment, N(e) estimates ranged between 59 and a few hundred, whereas values between 190 and positive infinity were estimated for the larger fragment. In both samples, we detected a signal of population decline, which was stronger in the small fragment. The estimated time of onset of this N(e) reduction was consistent with the hypothesis that recent road constructions have divided a continuous population into several isolated subpopulations. In the small fragment, N(e) of the local population may be so small that its long-term persistence is endangered.     

日本日光地区森林中梅花鹿的夏季巢区面积和内部利用

为了估算梅花鹿(Cervusnippon)巢区面积和内部利用以及雌雄个体间的比较,于1993-1997年在日本国日光国立公园使用无线电遥测定位法测定了8头成年雌鹿和4头雄鹿(包括1头亚成年)在森林生境中的活动定位点。按照当地梅花鹿离开和返回越夏地的日期,使用每年6月1日至10月25日的无线电遥测定位数据,采用定值核心法(Fixed kernel)计算了梅花鹿的夏季巢区面积和内部利用密度分布。梅花鹿雄鹿夏季巢区面积(192·5±50·5 hm2)显著大于雌鹿(115·7±56·7 hm2,P=0·017) ,其半家区面积(HRS0·50)和核心区面积(HRS0·25)也显著大于雌鹿(依次为P=0·027和P=0·042) ,但巢区内部利用集中度指标Ah(HRS0·50/HRS0·95)和Ac(HRS0·25/HRS0·50)在雌雄鹿之间没有显著性差异(依次为P=0·999和P=0·234)。在无线电遥测的12头梅花鹿中, 11头个体的巢区为单核心型,只有1头成年雄鹿的巢区为双核心型。11头梅花鹿个体的混合数据显示巢区面积和体重之间存在显著性相关(P=0·049) [动物学报52 (2) : 235 -241 , 2006]。     

Evolutionary consequences of habitat fragmentation: population size and density affect selection on inflorescence size in a perennial herb

Habitat fragmentation is considered to be one of the major threats to biological diversity worldwide. To date, however, its consequences have mainly been studied in an ecological context, while little is known about its effects on evolutionary processes. In this study we examined whether habitat fragmentation affects selection on plant phenotypic traits via changes in plant-pollinator interactions, using the self-incompatible perennial herb Phyteuma spicatum. Specifically, we hypothesized that limited pollination service in small or low-density populations leads to increased selection for traits that attract pollinators. We recorded mean seed production per capsule and per plant as a measure of pollination intensity and assessed selection gradients (i.e., trait-fitness relationships) in 16 natural populations of varying size and density over 2 years. Mean seed production was not related to population size or density, except for a marginal significant effect of density on the mean number of seeds per capsule in 1 year. Linear selection for flowering time and synchrony was consistent across populations; relative fitness was higher in earlier flowering plants and in plants flowering synchronously with others. Selection on inflorescence size, however, varied among populations, and linear selection gradients for inflorescence size were negatively related to plant population size and density in 1 year. Selection for increased inflorescence size decreased with increasing population size and density. Contrary to our expectation this appeared not to be related to changes in pollination intensity (mean seed production was not related to population size or density in this year), but was rather likely linked to differences in some other component of the abiotic or biotic environment. In summary, our results show that habitat fragmentation may influence selection on plant phenotypic traits, thereby highlighting potential evolutionary consequences of human-induced environmental change.     

Home range size and distribution in a wild population of Cape pangolins, Manis temminckii, in north‐west Zimbabwe

The aim of this study was to estimate the size of the home range used by individual Cape pangolins ( Manis temminckii ). The study was conducted in 1991–95 at Sengwa Wildlife Research Institute, Gokwe, Zimbabwe. Radio‐telemetry was used to repeatedly locate study pangolins. Home range area was estimated from the location of the burrows used by each pangolin. It was established that pangolins must be tracked for 85+ days to generate a reliable estimate of home range. The size of home ranges, determined from 1141 tracking days of data for 10 pangolins (3·0–15·8 kg body mass) that were each tracked for at least 85 days, was from 0·17 to 11·07 km². Larger (older) pangolins used more burrows and had larger home ranges than smaller (younger) pangolins. The data indicate that large adult males had larger home ranges than large adult females. Within each sex, the home ranges were adjacent to each other with only slight overlap at the boundaries. There was clear overlap of home ranges between males and females.     

Ecology of Nectomys squamipes, the neotropical Water rat, in central Brazil: home range, habitat selection, reproduction and behaviour

Relatively few studies have examined the ecology of small mammals of South American tropical forests. The ecology of the neotropical Water rat, Nectomys squamipes , was investigated in gallery forest in central Brazil during a 14-month mark-recapture study. A total of 11 male and 10 female Water rats were captured; minimum number of animals known alive per month varied from one to four per hectare. Home range size for individuals captured eight or more times was 0.3–1.6 ha. Water rats were captured almost exclusively near the stream or in other inundated portions of the forest. Distance to water, soil moisture, number of tree ferns, number of trees, exposed tree-root cover, and litter cover on the ground were among the variables important in defining microhabitat of N. squamipes. At least some males were in breeding condition (testes scrotal) during all months; females were in breeding condition (vagina perforate) most of the year, but pregnancies were noted only in August, October and November. Captive Water rats consumed plant matter, insects (Blattidae, Gyrinidae, Scarabeidae), tadpoles and small fish. Aquatic prey items were located by searching movements of the forepaws. Water rats demonstrated agility in both climbing and swimming. Physiological dependence of N. squamipes on water is suggested by capture sites and observations of drinking in captive animals.     

Genome-wide signatures of population bottlenecks and diversifying selection in European wolves

Genomic resources developed for domesticated species provide powerful tools for studying the evolutionary history of their wild relatives. Here we use 61K single-nucleotide polymorphisms (SNPs) evenly spaced throughout the canine nuclear genome to analyse evolutionary relationships among the three largest European populations of grey wolves in comparison with other populations worldwide, and investigate genome-wide effects of demographic bottlenecks and signatures of selection. European wolves have a discontinuous range, with large and connected populations in Eastern Europe and relatively smaller, isolated populations in Italy and the Iberian Peninsula. Our results suggest a continuous decline in wolf numbers in Europe since the Late Pleistocene, and long-term isolation and bottlenecks in the Italian and Iberian populations following their divergence from the Eastern European population. The Italian and Iberian populations have low genetic variability and high linkage disequilibrium, but relatively few autozygous segments across the genome. This last characteristic clearly distinguishes them from populations that underwent recent drastic demographic declines or founder events, and implies long-term bottlenecks in these two populations. Although genetic drift due to spatial isolation and bottlenecks seems to be a major evolutionary force diversifying the European populations, we detected 35 loci that are putatively under diversifying selection. Two of these loci flank the canine platelet-derived growth factor gene, which affects bone growth and may influence differences in body size between wolf populations. This study demonstrates the power of population genomics for identifying genetic signals of demographic bottlenecks and detecting signatures of directional selection in bottlenecked populations, despite their low background variability.     

种群外部及内部因子对东方田鼠巢区大小的效应

在野外围栏条件下, 采用重复的2×2×2析因实验, 测定外部和内部因子对东方田鼠(Microtus fortis)巢区大小的作用模式。研究结果表明, 雄体巢区大小显著大于雌体巢区大小。雄体巢区大小与体重存在显著的正相关, 而雌体巢区大小与体重的相关不显著; 雄体和雌体巢区大小与种群数量均呈显著的线性负相关。外部因子对东方田鼠雄体和雌体巢区大小的作用不一致。在排除内部因子种群数量及体重对雄体巢区大小作用的条件下, 食物对雄体巢区大小的作用显著; 而捕食及种间竞争的独立作用及其交互作用, 以及3 种外部因子的交互作用均不显著; 在排除种群数量对巢区大小作用的条件下, 食物与捕食的独立作用及3 种外部因子的交互作用对雌体巢区大小的效应均达到显著水平, 食物与种间竞争的交互作用接近显著, 而种间竞争的独立作用、食物和捕食的交互作用, 以及捕食与种间竞争的交互作用对雌体巢区大小的效应均不显著。本文结果验证了种群外部因子食物、捕食及种间竞争、种群内部因子种群数量及个体体重对田鼠种群巢区大小具有独立和交互作用的假设。     

Population size,habitat fragmentation,and the nature of adaptive variation in a stream fish

Whether and how habitat fragmentation and population size jointly affect adaptive genetic variation and adaptive population differentiation are largely unexplored. Owing to pronounced genetic drift, small, fragmented populations are thought to exhibit reduced adaptive genetic variation relative to large populations. Yet fragmentation is known to increase variability within and among habitats as population size decreases. Such variability might instead favour the maintenance of adaptive polymorphisms and/or generate more variability in adaptive differentiation at smaller population size. We investigated these alternative hypotheses by analysing coding-gene, single-nucleotide polymorphisms associated with different biological functions in fragmented brook trout populations of variable sizes. Putative adaptive differentiation was greater between small and large populations or among small populations than among large populations. These trends were stronger for genetic population size measures than demographic ones and were present despite pronounced drift in small populations. Our results suggest that fragmentation affects natural selection and that the changes elicited in the adaptive genetic composition and differentiation of fragmented populations vary with population size. By generating more variable evolutionary responses, the alteration of selective pressures during habitat fragmentation may affect future population persistence independently of, and perhaps long before, the effects of demographic and genetic stochasticity are manifest.