New Species of Eimeria (Protozoa: Eimeriidae) from Malaysian Rats*

SYNOPSIS. Four new species of Eimeria were found in a survey of 255 rats of 14 species in Malaysia. E. tikusi n. sp. and E. edwardsi n. sp. are described from Edwards' rat Rattus edwardsi. The ellipsoidal, single-layered oocysts of E. tikusi average 30.3 by 24.4 μ. A micropyle is absent; a polar granule is present. Ovoid sporocysts average 14.2 by 9.8 μ. A sporocyst residuum and Stieda body are present. The ovoid, 2-layered oocysts of E. edwardsi average 29.1 by 21.8 μ. A micropyle is present; a polar granule is absent. Ellipsoidal to ovoid sporocysts average 14.5 by 6.5 μ. A sporocyst residuum is present; Stieda body is small or absent. E. surifer n. sp. is described from the red spiny rat Rattus surifer. Its ellipsoidal 3-layered oocysts average 34.7 by 24.8 μ. A micropyle is absent; a polar granule is present. The ellipsoidal sporocysts average 15.4 by 9.5 μ. A sporocyst residuum, Stieda body and sub-Stieda body are present. E. sabani n. sp. is described from the long-tailed giant rat R. sabanus. Its ellipsoidal 2-layered oocysts average 28.5 by 21.7 μ. A micropyle is absent; a polar granule is present. The ellipsoidal-to-ovoid sporocysts average 11.9 by 8.0 μ. A sporocyst residuum and Stieda body are present.     

Biology and epidemics of Candidatus Liberibacter species,psyllid‐transmitted plant‐pathogenic bacteria

Candidatus Liberibacter species are Gram‐negative bacteria that live as phloem‐limited obligate parasites in plants, and are associated with several plant diseases. These bacteria are transmitted by insects called psyllids, or jumping plant lice, which feed on plant phloem sap. Citrus huanglongbing (yellow shoot) or citrus greening disease is associated with three different species of Ca. Liberibacter – Ca. L. asiaticus, Ca. L. africanus and Ca. L. americanus – all originally found on different continents. Ca. L. asiaticus is the most severe pathogen, spread by Asian citrus psyllid Diaphorina citri and causing devastating epidemics in several countries. Ca. L. africanus occurs in Africa where it is spread by the African citrus psyllid Trioza erytreae. Ca. Liberibacter solanacearum is associated with diseases in several solanaceous plants, and transmitted by potato psyllid Bactericera cockerelli. Zebra chip disease is causing large damage in potato crops in North America. In Europe Ca. Liberibacter solanacearum is associated with diseases of the Apiaceae family of plants, carrot and celery, and transmitted by psyllids Trioza apicalis and Bactericera trigonica. When Ca. Liberibacter is suspected as the disease agent, the diagnosis is confirmed by DNA‐based detection methods. Ca. Liberibacter‐associated plant diseases can be controlled by using healthy plant propagation material, eradicating symptomatic plants, and by controlling the psyllid populations spreading the disease.     

AXILOSPHAERA AND HETEROTETRACYSTIS,NEW CHLOROSPHAERACEAN GENERA FROM TENNESSEE SOIL12

Two new chlorosphaeracean genera were isolated into axenic culture from soil collected in cedar glades in Cedars of Lebanon State Forest, Wilson County, Tennessee. The distinguishing characteristics of the new monotypic genus Axilosphaera include an axile (asymmetric) ckloroplast with at least 1 pyrenoid and Chlamydomonas-type (walled) zoospores. A. vegetata is the type species. Reproduction is by dissociation of daughter cells following vegetative cell division, by zoospores, and by aplanospores. The new polytypic genus Heterotetracystis, comprising 3 species, H. akinetos, H. macrogranulosa, and H. intermedia, is characterized by a parietal chloroplast with at least 1 pyrenoid and walled zoospores with flagella of unequal length. Reproduction is by dissociation of daughter cells following vegetative cell division and by zoospores. H. akinetos is designated as the type species.     

Genetic control of damage-inducible restriction alleviation in Escherichia coli K12: an SOS function not repressed by lexA

Summary The alleviation of K-specific DNA restriction after treatment of cells by UV or nalidixic acid has been studied in mutants with various alleles of recA and lexA and combinations of these alleles and with recB and recF mutations. The studies show that induction of restriction alleviation by UV or nalidixic acid is abolished in mutants in which the recA protein is defective (recA13, recA56), its protease activity is altered (recA430) or in which it cannot be efficiently activated (recA142). Thermoinduction of restriction alleviation was observed in tif mutant (recA441). In lexA amber mutants restriction alleviation is not constitutive but is still inducible. In a lexA3 mutant restriction alleviation is inducible by nalidixic acid provided that recA protein is overproduced as a result of a recA operator mutation. Induction by UV depends on the recF function and an unidentified function (Y) which is controlled by the lexA protein. The recBC enzyme is necessary for induction by UV or by nalidixic acid. Temperature shift experiments with a thermosensitive recB mutant indicate that the recBC enzyme functions in an early step during UV-induction. It is concluded that the damage-inducible function which alleviates restriction is similar to other damage inducible repair (SOS) functions in the dependence on activated recA protease for induction, but that it differs from these functions by the absence of a direct control through the lexA repressor.     

Natural biological control of the pine processionary moth Thaumetopoea pityocampa (Den. & Schiff.) by the Argentine ant Linepithema humile (Mayr) in Portugal

1 Defoliation by larvae of the pine processionary moth, Thaumetopoea pityocampa, is negligible in stands of Pinus pinaster colonized by the Argentine ant Linepithema humile which preys fiercely on the young moth larvae. In contrast, such damage is widespread where pine plantations are colonized by native ants, predominantly Tapinoma nigerrimum and Lasius niger, which seemingly disregard the larvae. 2 Where L. humile- and native ant-occupied sectors adjoin, there is a 20–50 m overlap in the transition area between L. humile- and native ant-occupied pines. This was most evident in a > 500 ha plantation where there was severe or very severe T. pityocampa attack in native ant sectors contrasting with none in adjoining L. humile sectors. 3 Predation by L. humile is no doubt enhanced by its existence as super-colonies over very large areas, by its foraging activity and recruitment on trees throughout the time when T. pityocampa and other prey are present, and by honeydew- producing Homoptera which help retain foraging L. humile workers in pine tree crowns. 4 The role of L. humile could be enhanced by cultivations that disturb the soil and restrain ground vegetation.     

Molecular analysis of theBg-rbg transposable element system ofZea mays L.

Summary The two components of theBg-rbg transposable element system of maize have been cloned. TheBg element, isolated from the mutable allelewx-m32 :: Bg is inserted in the intron of theWaxy (Wx) gene between exons 12 and 13. The length of the element is of 4869 bp.Bg has 5 by terminal inverted repeats, and generates upon insertion an 8 by direct duplication of the target sequence. Both ends of theBg element contain a 76 by direct repeat adjacent to the terminal inverted repeats. The hexamer motif TATCG_kC ^G is here repeated several times in direct or inverse orientation. Therbg element was isolated from the mutable alleleo2m(r) where it is located in the promoter region of theOpaque-2 (O2) gene.rbg is approximately 4.5 kb in length, has terminal inverted repeats identical to those of theBg element, and is also flanked by an 8 by direct duplication at the target site. LikeBg, rbg carries the 76 by direct repeats. Restriction enzyme analysis reveals that, compared toBg, the receptor element is distinguishable by small deletion and insertion events. Sequence data indicate that not more than 75% homology exists at the DNA level between therbg element and the autonomousBg element.     

<Emphasis Type="Italic">O</Emphasis>-GlcNAcylation of the <Emphasis Type="Italic">Plum pox virus</Emphasis> capsid protein catalyzed by SECRET AGENT: characterization of <Emphasis Type="Italic">O</Emphasis>-GlcNAc sites by electron transfer dissociation mass spectrometry

The capsid protein of Plum pox virus (PPV-CP) is modified with O-linked β-N-acetylglucosamine (O-GlcNAc). In Arabidopsis thaliana this modification is made by an O-GlcNAc transferase named SECRET AGENT (SEC). Modification of PPV-CP by SEC is hypothesized to have a direct role in the infection process, because virus titer and rate of spread are reduced in SEC mutants. Previous studies used deletion mapping and site-directed mutagenesis to identify four O-GlcNAc sites on the capsid protein that are modified by Escherichia coli-expressed SEC. The infection process was not affected when two of these sites were mutated suggesting that O-GlcNAcylation of these sites does not have a significant role in the infection process or that a subset of the modifications is sufficient. Since it is possible that the mutational mapping approach missed or incorrectly identified O-GlcNAc sites, the modifications produced by E. coli-expressed SEC were characterized using mass spectrometry. O-GlcNAcylated peptides were enzymatically tagged with galactose, the products were enriched on immobilized Ricinus communis agglutinin I and sequenced by electron transfer dissociation (ETD) mass spectrometry. Five O-GlcNAc sites on PPV-CP were identified. Two of these sites were not identified in by the previous mutational mapping. In addition, one site previously predicted by mutation mapping was not detected, but modification of this site was not supported when the mutation mapping was repeated. This study suggests that mapping modification sites by ETD mass spectrometry is more comprehensive and accurate than mutational mapping.     

Expression of the apoptosis inducer gene head involution defective in primordial germ cells of the Drosophila embryo requires eiger,p53, and loki function

Nanos (Nos) is an evolutionarily conserved protein essential for the maintenance of primordial germ cells (PGCs). In Drosophila, the PGCs or pole cells express head involution defective (hid), which is required for caspase activation, but its translation is repressed by maternal Nos. In the absence of Nos activity, translation of hid mRNA into protein induces apoptosis in pole cells. However, it remains unclear how hid mRNA is regulated in pole cells. Here, we report that hid expression requires eiger (egr), a tumor necrosis factor ligand (TNF) homologue, which is induced in pole cells by decapentaplegic (dpp). In addition, we demonstrate that p53 and loki (lok), a damage‐activated kinase known to be required for p53 phosphorylation, are both required for hid expression in pole cells. Since maternal lok mRNA is enriched in pole cells, it is possible that ubiquitously distributed p53 is activated in pole cells by maternal Lok. We propose that hid expression is activated in a pole cell‐specific manner by loki/p53 and dpp/egr during embryogenesis.     

Leptosphaeria maculans AvrLm9: a new player in the game of hide and seek with AvrLm4‐7

Blackleg disease of Brassica napus caused by Leptosphaeria maculans (Lm) is largely controlled by the deployment of race‐specific resistance (R) genes. However, selection pressure exerted by R genes causes Lm to adapt and give rise to new virulent strains through mutation and deletion of effector genes. Therefore, a knowledge of effector gene function is necessary for the effective management of the disease. Here, we report the cloning of Lm effector AvrLm9 which is recognized by the resistance gene Rlm9 in B. napus cultivar Goéland. AvrLm9 was mapped to scaffold 7 of the Lm genome, co‐segregating with the previously reported AvrLm5 (previously known as AvrLmJ1). Comparison of AvrLm5 alleles amongst the 37 re‐sequenced Lm isolates and transgenic complementation identified a single point mutation correlating with the AvrLm9 phenotype. Therefore, we renamed this gene as AvrLm5‐9 to reflect the dual specificity of this locus. Avrlm5‐9 transgenic isolates were avirulent when inoculated on the B. napus cultivar Goéland. The expression of AvrLm5‐9 during infection was monitored by RNA sequencing. The recognition of AvrLm5‐9 by Rlm9 is masked in the presence of AvrLm4‐7, another Lm effector. AvrLm5‐9 and AvrLm4‐7 do not interact, and AvrLm5‐9 is expressed in the presence of AvrLm4‐7. AvrLm5‐9 is the second Lm effector for which host recognition is masked by AvrLm4‐7. An understanding of this complex interaction will provide new opportunities for the engineering of broad‐spectrum recognition.     

Isolation of the trypsin inhibitors in Ascaris lumbricoides var. suum using affinity chromatography

A method for isolating three water-soluble trypsin inhibitors from Ascaris lumbricoides var. suum by affinity chromatography is described. The trypsin inhibitors captured by affinity chromatography are resolved into three species by chromatography on CM-Sephadex at pH 8.1. The inhibitors are named in the order that they are released from the CM-Sephadex column. Ascaris Trypsin Inhibitor 1 is the same as inhibitor CM-1 described by [3.] and inhibitor Peak I of U. Kucich and [4.]. Ascaris Trypsin Inhibitor 2 is the inhibitor described by [2.] and inhibitor CM-2 of [3.]. Ascaris Trypsin Inhibitor 3 is the same as inhibitor Peak II of [4.]. Ascaris Trypsin Inhibitor 1 is 80%, Ascaris Trypsin Inhibitor 2 is 8%, and Ascaris Trypsin Inhibitor 3 is 12% of the water-soluble trypsin inhibitors present in Ascaris. With this procedure all of the Ascaris trypsin inhibitors can be isolated in a few days. This shortens the exposure of personnel to crude extracts of Ascaris and diminishes the biological hazard of working with them. Frequent exposure to Ascaris extracts may evoke an anaphylactic response in personnel.     

Growth phase-differential quorum sensing regulation of anthranilate metabolism in <Emphasis Type="Italic">Pseudomonas aeruginosa</Emphasis>

Pseudomonas quinolone signal (PQS) plays a role in the regulation of virulence genes and it is intertwined in the las/rhl quorum sensing (QS) circuits of Pseudomonas aeruginosa. PQS is synthesized from anthranilate by pqsA-D and pqsH whose expression is influenced by the las/rhl systems. Since anthranilate can be degraded by functions of antABC and catBCA, PQS synthesis might be regulated by the balance between the expression of the pqsA-D/phnAB, pqsH, antABC, and catBCA gene loci. antA and catA are repressed by LasR during log phase and activated by RhlR in late stationary phase, whereas pqsA-E/phnAB is activated by LasR in log phase and repressed by RhlR. QscR represses both but each repression occurs in a different growth phase. This growth phase-differential regulation appears to be accomplished by the antagonistic interplay of LasR, RhlR, and QscR, mediated by two intermediate regulators, AntR and PqsR, and their cofactors, anthranilate and PQS, where the expressions of antR and pqsR and the production of anthranilate and PQS are growth phase-differentially regulated by QS systems. Especially, the anthranilate level increases in an RhlR-dependent manner at late stationary phase. From these results, we suggest that RhlR and LasR regulate the anthranilate metabolism in a mutually antagonistic and growth phase-differential manner by affecting both the expressions and activities of AntR and PqsR, and that QscR also phase-differentially represses both LasR and RhlR functions in this regulation.     

Process Development in Biotechnology – A Re‐Evaluation

This review considers some process development problems in biotechnology and presents examples of solutions, which were developed in cooperation with industrial partners. These processes include the production of restriction endonuclease EcoRI by recombinant Escherichia coli, which is toxic to the cell, penicillin V by Penicillium chrysogenum, xylanase by Aspergillus awamori, cephalosporin C by Acremonium chrysogenum, erythritol by Moniliella tomentosa var pollinis, and alkaline serine protease by Bacillus licheniformis. Special attention is given to the practical aspects of product development.     

fhy1 defines a branch point in phytochrome A signal transduction pathways for gene expression

Physiological analysis of the fhy1 mutant of Arabidopsis has led to the proposal that the mutant is deficient in a downstream component of the phytochrome A signal transduction pathway. To define this lesion at the molecular level, we have examined the expression of a range of phytochrome-regulated genes in fhy1. In far-red light, the regulation of genes such as CHS and CHI is blocked in fhy1, whereas the induction of CAB and NR genes is affected minimally. In contrast, the induction of all genes tested is blocked in a phytochrome A-deficient mutant, confirming that gene expression in far-red light is regulated solely by phytochrome A. Thus, fhy1 defines a branch point in phytochrome A signal transduction pathways for gene expression. Contrary to the general opinion that responses to continuous red light are mediated by phytochrome B and other photostable phytochromes, we have shown also that red light-induction of CHS is mediated almost entirely by phytochrome A. Furthermore, phytochrome A-mediated induction of CHS by red light is blocked in fhy1. The induction of CHS by blue light, however, is normal in fhy1, suggesting that although FHY1 is a component of the phytochrome A signaling pathway, it is not a component of the blue-light signaling pathway for CHS expression.