Activation volumes for the two steps of the conjugate-base mechanism in liquid ammonia

The pressure dependence (10–4000 bar) of the kinetics of the ammoniation of[Co(NH₃)₅X](ClO₄)₂ (X = N₃, Cl) and the isomerization of [Co(NH₃)₅(ONO)](ClO₄)₂ in liquid ammonia is reported. The conjugate-base mechanism is operative for these complexes over the entire pressure range used. Activation and thermodynamic parameters were obtained for each of the two steps of the mechanism for [Co(NH₃)₅(N₃)](ClO₄)₂ at 20 bar. Values for the overall activation volume extrapolated to zero pressure are ΔV³(0) = ?12 (11.35 °C, ONO); ?20 (24.45 °C, N₃) and ?30 (0.50 °C, Cl) cm³ mol^?1. Application of El'yanov and Hamann's empirical relation for the pressure dependence of the ionization of weak acids separates the contributions of the pre-equilibrium (ΔV_CB⁰) and the elimination or isomerization reaction (ΔV₂³) (at zero pressure). The values obtained for [Co(NH₃)₅X](ClO₄)₂ are (givens as X; ΔV_CB⁰ and ΔV₂³ in cm³ mol^?1; T in °C): (ONO; ?16 and ?15; 11.35), (N₃; ?22 and 1;24.45), (Cl; ?22 and 3;0.50). These values fit in the accepted picture of volume effects in cobalt(III) ammine kinetics.     

Hydrocelluloses with low degree of polymerisation from liquid ammonia treated cellulose

The heterogeneous hydrolytic degradation of cellulose after treatment with liquid ammonia has been studied. The level off degree of polymerisation (LODP) of liquid ammonia treated (LAT) linters is reached after 3 h when hydrolysed in hydrochloric acid (6.5 mol/l) at 60 °C. The hydrocelluloses were characterized as trimethylsilyl derivatives and as tricarbanilates. LODPs of non-activated celluloses were in the range from 55 to 77, while LAT celluloses had LODPs between 27 and 39. Trimethylsilyl derivatives and tricarbanilates gave almost identical elution curves in size exclusion chromatography indicating comparable hydrodynamic volumes. Glass transition temperatures of trimethylsilyl celluloses with DPs from 27 to 39 were found to be lower than those of the derivatives of the parent celluloses (Avicel, cotton linters) and showed a dependence on molar mass indicating that oligomeric celluloses are obtained by the method reported. Treatment of cellulose in aqueous ammonia was less efficient than liquid ammonia treatment.     

N-Deacetylation of 2-acetamido-2-deoxy-hexosecontaining oligosaccharides and polysaccharides by calcium in liquid ammonia

N-Deacetylation of 2-acetamido-2-deoxy-hexose residues is accomplished in liquid ammonia containing calcium. Oligosaccharides, lacto-N-fucopentaose II and lacto-N-difucohexaose I, containing 3,4-disubstitutedN-acetylhexosamine residues are quantitativelyN-deacetylated. When applied to polysaccharides, however, only partialN-deacetylation was achieved.Author for correspondence. AXRD     

Ammonium recruitment and ammonia transport by E. coli ammonia channel AmtB

To investigate substrate recruitment and transport across the Escherichia coli Ammonia transporter B (AmtB) protein, we performed molecular dynamics simulations of the AmtB trimer. We have identified residues important in recruitment of ammonium and intraluminal binding sites selective of ammonium, which provide a means of cation selectivity. Our results indicate that A162 guides translocation of an extraluminal ammonium into the pore lumen. We propose a mechanism for transporting the intraluminally recruited proton back to periplasm. Our mechanism conforms to net transport of ammonia and can explain why ammonia conduction is lost upon mutation of the conserved residue D160. We unify previous suggestions of D160 having either a structural or an ammonium binding function. Finally, our simulations show that the channel lumen is hydrated from the cytoplasmic side via the formation of single file water, while the F107/F215 stack at the inner-most part of the periplasmic vestibule constitutes a hydrophobic filter preventing AmtB from conducting water.     

The apparent Km of ammonia for carbamoyl phosphate synthetase (ammonia) in situ.

Experiments with carbamoyl phosphate synthetase (ammonia) in solution and in isolated mitochondria are reported which show the following. NH3 rather than NH4+ is the substrate of the enzyme. The apparent Km of NH3 for the purified enzyme is about 38 microM. The apparent Km for NH3 measured in intact isolated mitochondria is about 13 microM. This value was obtained for both coupled and uncoupled mitochondria and was unchanged when the rate of carbamoyl phosphate synthesis was increased 2-fold by incubating uncoupled mitochondria in the presence of 5 mM-N-acetylglutamate. According to the literature, the concentration of NH3 in liver is well below the measured apparent Km. On the basis of this and previous work we conclude that, quantitatively, changes in liver [NH3] and [ornithine] are likely to be the most important factors in the fast regulation of synthesis of carbamoyl phosphate and urea. This conclusion is consistent with all available evidence obtained with isolated mitochondria, isolated hepatocytes, perfused liver and whole animals.     

Methylamine and ammonia transport in Saccharomyces cerevisiae.

Methylamine (methylammonium ion) entered Saccharomyces cerevisiae X2180-A by means of a specific active transport system. Methylamine uptake was pH dependent (maximum rate between pH 6.0 and 6.5) and temperature dependent (increasing up to 35 C) and required the presence of a fermentable or oxidizable energy source in the growth medium. At 23 C the vmax for methylamine transport was similar 17 nmol/min per mg of cells (dry weight) and the apparent Km was 220 muM. The transport system exhibited maximal activity in ammonia-grown cells and was repressed 60 to 70 percent when glutamine or asparagine was added to the growth medium. There was no significant derepression of the transport system during nitrogen starvation. Ammonia (ammonium ion) was a strong competitive inhibitor of methylamine uptake, whereas other amines inhibited to a much lesser extent. Mutants selected on the basis of their reduced ability to transport methylamine (Mea-R) simultaneously exhibited a decreased ability to transport ammonia.     

斑茅酶解转化可发酵单糖的液氨预处理及参数优化

斑茅(Saccharum arundinaceum Retz.)的生物产量高,对土壤条件要求低,可作为纤维素乙醇生产的原料作物在我国南方地区广泛种植.实验以斑茅为原料,采用液氨预处理法克服其水解顽抗性,并添加纤维素酶进行酶解,运用高效液相色谱(HPLC)测定了酶解液中的单糖含量.实验结果表明在纤维素酶添加量为15FPU/(g当量葡聚糖)、预处理原料含水率为80％、预处理温度为130℃、预处理驻留时间为10 min、液氨与生物质的质量比例为2∶1时,葡聚糖和木聚糖的总转化率分别为69.34％和82.60％,相比于未作预处理的原料分别提高了573％和1 056％,单糖产量提高8倍.实验结果表明液氨预处理对斑茅是一种有效的预处理方式,并优于稀酸或湿爆法预处理,与酸预处理和氨爆法(AFEX)处理效果接近.