Modelling Si-N-limited growth of diatoms

A mechanistic model for silicon (Si) physiology is developed,interfaced with a model of nitrogen (N) physiology, which iscapable of simulating the major documented facets of Si–Nphysiology in diatoms. The model contains a cell cycle componentthat is involved in regulating the timing of the synthesis ofvalves, girdles and setae. In addition to reproducing the timingof diatom cell division within a light–dark cycle, themodel simulates the following features seen in real diatoms.Synthesis of valves only occurs during G₂ interphase and M,while the girdles and (if appropriate) setae are synthesizedduring G₁. Si stress alone results in a loss of setae, followedby a thinning of the valves in successive generations untila minimum Si cell quota is attained. After this point, the durationof G₂ increases and growth is Si limited. Concurrently, thecarbon (C) cell quota increases, offering the capability tosimulate the documented increase in sinking rates with Si stress.N stress alone results in an increase in the duration of G₁and G₂ interphases, and high Si cell quotas. From this complexmodel, which must be run for arrays of subpopulations to simulatenon-synchronous growth, a simpler model is developed. This iscapable of reproducing similar growth dynamics, although withno reference to component parts of the frustule. When alliedto a photoacclimative submodel, a prediction of the model isthat diatoms starved of Si will release increased amounts ofdissolved organic C because cell growth is halted more rapidlythan the photosystems can be degraded.     

The diatoms ingested by freshwater snails: temporal,spatial, and interspecific variation

Seventeen species of diatoms, representing a broad range of sizes, shapes, and growth habits, were collected from rocks in rapidly-flowing sections of the Mitchell River, North Carolina. The diatoms ingested by adult Goniobasis proxima, juvenile Leptoxis carinata, and adult Physa sp. co-occurring in this habitat were indistinguishable from one another, in spite of great differences in radular morphology. All snails sampled the diatom flora almost randomly, with only one or two of the larger diatom species under-represented in the gut contents. Some snails also seemed to selectively ingest the smaller individuals of the larger diatom taxa, and larger individuals of the smaller diatom taxa. The diatoms identifiable in juvenile Goniobasis guts were somewhat more distinctive, although this seemed to be due at least partly to more mechanical breakage. The diatom flora of quiet, muddy pools was much different from that of shallow, rocky areas, but once again, Goniobasis seemed to sample the available flora randomly. Seasonal variation was also apparent in the diatom diet of Goniobasis. We suggest that in some cases, it may be reasonable to use snails to sample the diatom assemblage present in a particular habitat, if more direct methods are impractical.     

The spatial and temporal variability of the magnetoencephalogram alpha rhythm in the normal human subject

Using one-channel SQUID biomagnetometer alpha rhythm was recorded in five healthy men and eight healthy women. Maps of distribution of maximum values of mean MEG amplitudes were analyzed. Most frequently MEG maxima predominated in the parietal parts of the head. Less frequently they were found in the occipital parts. In single instances they could be found in the posterocentral sections and on the midline. In most cases an amplitude interhemispheric asymmetry of extrema was revealed. In men the mean amplitude of the alpha-rhythm predominated more frequently on the left side and in women--on the right one. The map of distribution of mean amplitudes was stable at least during two weeks. Narrow-band filtration allowed to reveal up to three discrete amplitude modes. At definite frequencies the MEG amplitude was continuously stable during several seconds.     

Net anthropogenic phosphorus inputs: spatial and temporal variability in the Chesapeake Bay region

We estimated net anthropogenic phosphorus inputs (NAPI) in the Chesapeake Bay region. NAPI is an index of phosphorus pollution potential. NAPI was estimated by quantifying all phosphorus inputs and outputs for each county. Inputs include fertilizer applications and non-food phosphorus uses, while trade of food and feed can be an input or an output. The average of 1987, 1992, 1997, and 2002 NAPI for individual counties ranged from 0.02 to 78.46 kg P ha⁻¹ year⁻¹. The overall area-weighted average NAPI for 266 counties in the region was 4.52 kg P ha⁻¹ year⁻¹, indicating a positive net phosphorus input that can accumulate in the landscape or can pollute the water. Large positive NAPI values were associated with agricultural and developed land cover. County area-weighted NAPI increased from 4.43 to 4.94 kg P ha⁻¹ year⁻¹ between 1987 and 1997 but decreased slightly to 4.86 kg P ha⁻¹ year⁻¹ by 2002. Human population density, livestock unit density, and percent row crop land combined to explain 83% of the variability in NAPI among counties. Around 10% of total NAPI entering the Chesapeake Bay watershed is discharged into Chesapeake Bay. The developed land component of NAPI had a strong direct correlation with measured phosphorus discharges from major rivers draining to the Bay (R ² = 0.81), however, the correlation with the simple percentage of developed land was equally strong. Our results help identify the sources of P in the landscape and evaluate the utility of NAPI as a predictor of water quality.     

Seasonal and spatial variability of dissolved organic matter composition in the lower Amazon River

We analyzed the molecular composition of dissolved organic matter (DOM) in the lower Amazon River (ca. 850 km from Óbidos to the mouth) using ultrahigh-resolution mass spectrometry and geochemical tracers. Changes in DOM composition along this lower reach suggest a transition from higher plant-derived DOM to more algal/microbial-derived DOM. This result was likely due to a combination of autochthonous production, alteration of terrigenous DOM as it transits down the river, and increased algal inputs from floodplain lakes and clearwater tributaries during high discharge conditions. Spatial gradients in dissolved organic carbon (DOC) concentrations varied with discharge. Maximal DOC concentrations were observed near the mouth during high water, highlighting the importance of lateral inputs of DOM along the lower river. The majority of DOM molecular formulae did not change within the time it takes the water in the mainstem to be transported through the lower reach. This is indicative of molecules representing a mixture of compounds that are resistant to rapid alteration and reactive compounds that are continuously replenished by the lateral input of terrestrial organic matter from the landscape, tributaries, and floodplains. River water incubations revealed that photo- and bio-transformation alter at most 30% of the DOM molecular formulae. River discharge at the mouth differed from the sum of discharge measurements made at Óbidos and the main gauged tributaries in the lower Amazon. This indicates that changes in hydrology and associated variations in the source waters along the lower reach affected the molecular composition of the DOM that is being transported from the Amazon River to the coastal ocean.     

Integrating spatial and temporal variability into the analysis of fish food web linkages in Tijuana Estuary

Our understanding of fish feeding interactions at Tijuana Estuary was improved by incorporating estimates of spatial and temporal variability into diet analyses. We examined the stomach contents of 7 dominant species (n=579 total fish) collected between 1994 and 1999. General feeding patterns pooled over time produced a basic food web consisting of 3 major trophic levels: (1) primary consumers (Atherinops affinis, Mugil cephalus) that ingested substantial amounts of plant material and detritus; (2) benthic carnivores (Clevelandia ios, Hypsopsetta guttulata, Gillichthys mirabilis, and Fundulus parvipinnis) that ingested high numbers of calanoid copepods and exotic amphipods (Grandidierella japonica); and (3) piscivores (Paralichthys californicus and Leptocottus armatus) that often preyed on smaller gobiids. Similarity-based groupings of individual species' diets were identified using nonmetric multidimensional scaling to characterize their variability within and between species, and in space and time. This allowed us identify major dietary shifts and recognize events (i.e., modified prey abundance during 1997–98 El Ni no floods) that likely caused these shifts.     

Dietary variability in fishes: the roles of taxonomic, spatial, temporal and ontogenetic factors

In spite of the general use of diet data in ecological research, still very little is known about the relative roles of spatial, temporal and biotic (e.g. taxonomic identity, size, sex) factors in dietary variability of fishes. Here, we applied canonical correspondence analysis and variation partitioning to examine the roles of taxonomic, annual, seasonal, lake basin, habitat and ontogenetic (standard length, L _S) factors in the dietary variation of fishes in large and shallow Lake Balaton, Hungary. The analyses were performed at the assemblage (15 fish species) and the individual species levels, and based on high (24 fine resource categories) and low resolution (nine broad resource categories) diet data. As hypothesised, most of the explained variation related to interspecific differences, while the roles of sampling year, season, lake area, habitat and L _S proved to be unexpectedly low at the assemblage level. In addition, no regularity was found in how the relative roles of these factors change between fish species. The high ratio of the unexplained variation suggests that individual variations in foraging strategies and resource use of fishes and unascertained stochastic processes had a strong influence on dietary variability both at the assemblage and the individual species levels.     

Implications of temporal and spatial variability in Paracentrotus lividus populations to the associated commercial coastal fishery

Analysis of population structure and behaviour of a semi-enclosed and theoretically non-fished population of the echinoid Paracentrotus lividus at Lough Hyne marine nature reserve, Co. Cork, Ireland, showed distinct variability. Aspects of the behavioural variability in this species have significant consequences for the natural fishery harvest potential of this species. Whether or not, when and where individuals migrate to the upper surfaces of rocks varies on a local and regional scale as well as seasonally. The effect of this is apparent changes in (a) the population structure, (b) the population size and (c) the population centres of abundance. The population structure and size of the Lough Hyne population has changed substantially, as have those on a larger spatial scale, although the causative agents are debatable. Such changes are the result of large-scale mortality of adults and failure of cohort recruitment. Despite the undeniable pressures of overfishing at many localities, it seems likely there is a strong `natural' and possibly predictable element to the variability in P. lividus population size and structure. For the restoration and sustainable harvest of Irish P. lividus aspects of its behavioural ecology need to be taken more closely into consideration.     

Spatial distribution and temporal variability of some aquatic insects in the Franco-Geneva River,Allondon

The Allodon River, a tributary of the Rhône, has suffered considerably from the recent expansion of human activities in the Geneva region. This study documents changes in its benthic fauna by comparing species richness before and after 1986 and by considering the possibilities of recolonization by drift.

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Résumé L'Allondon, affluent du Rhône, est une rivière qui a considérablemen t souffert d'une expansion récente des activités humaines dans la région genevoise. Cette étude met en lumière l'évolution de certains éléments de la faune benthique en comparant les richesses specifiques avant et après 1986, année critique pour la macrofaune benthique du bassin genevois. Elle met en évidence les possibilités de recolonisation par dérive de certains recours de l'Allondon à partir d'affluents moins perturbés.

     

Small-scale spatial variability in intertidal and subtidal turfing algal assemblages and the temporal generality of these patterns

Spatial and temporal variation in patterns of distribution and abundance of algal assemblages is large and often occurs at extremely small spatial and temporal scales. Despite this, few studies investigate interactions between these scales, that is, how patterns of spatial variation change through time. This study investigated a number of scales of spatial variation (from tens of centimetres to kilometres) in assemblages of intertidal and subtidal turfing algae. Significant differences were found in the composition and abundances of species in assemblages of turf at all spatial scales tested. Much of the variation among assemblages could, however, be explained at the scale of quadrats (tens of centimetres apart) (27±1.4 (SE)% of dissimilarity) with an additional 7±1.2% explained at the scale of sites (tens of metres apart) and 10±1.5% at the scale of locations (kilometres apart). Although the greatest dissimilarity in assemblages occurred at the scale of habitats, this accounted for a relatively small proportion of the overall variation in assemblages. These patterns were consistent through time, that is, at each sampling time the spatial scale explaining the greatest proportion of variation in assemblages was replicate quadrats separated by tens of centimetres. These patterns appear to be due to small-scale variation in patterns of distribution and abundances of the individual species that comprise turfing algal assemblages. The results of this experiment suggest that large scale processes have less effect on patterns of variability of algal assemblages than those occurring on relatively smaller spatial scales and that small-scale spatial variation should not be considered as simply “noise”.     

Comparative analysis of temporal and spatial variability in above-ground production in a deciduous forest and prairie

Production patterns of tallgrass prairie and adjacent eastern deciduous forest were summarized for a five to seven year period. Each system responded differentially to annual or growing season rainfall and solar energy (measured by pan water evaporation). Overall, forest productivity was negatively correlated with annual precipitation; the prairie exhibited no relationship with precipitation. These differences probably reflect the lack of water limitation of the forest and the downstream position of the forest.
Wood and seed production in the forest were the most variable components measured in our study. Neither variable was related to forest foliage production. Seed production in the prairie was also variable within and between years but was related to prairie foliage production. Prairie seed production was not correlated with seed production of the forest.
The two ecosystems respond differentially and independently of each other within the range of climatic variation observed here. Such differences have potential significance to consumers who use both systems for habitat or resources.     

Multiple driving factors explain spatial and temporal variability in coral calcification rates on the Bermuda platform

Experimental studies have shown that coral calcification rates are dependent on light, nutrients, food availability, temperature, and seawater aragonite saturation (Ω _arag), but the relative importance of each parameter in natural settings remains uncertain. In this study, we applied Calcein fluorescent dyes as time indicators within the skeleton of coral colonies (n = 3) of Porites astreoides and Diploria strigosa at three study sites distributed across the northern Bermuda coral reef platform. We evaluated the correlation between seasonal average growth rates based on coral density and extension rates with average temperature, light, and seawater Ω _arag in an effort to decipher the relative importance of each parameter. The results show significant seasonal differences among coral calcification rates ranging from summer maximums of 243 ± 58 and 274 ± 57 mmol CaCO₃ m^?2 d^?1 to winter minimums of 135 ± 39 and 101 ± 34 mmol CaCO₃ m^?2 d^?1 for P. astreoides and D. strigosa, respectively. We also placed small coral colonies (n = 10) in transparent chambers and measured the instantaneous rate of calcification under light and dark treatments at the same study sites. The results showed that the skeletal growth of D. strigosa and P. astreoides, whether hourly or seasonal, was highly sensitive to Ω _arag. We believe this high sensitivity, however, is misleading, due to covariance between light and Ω _arag, with the former being the strongest driver of calcification variability. For the seasonal data, we assessed the impact that the observed seasonal differences in temperature (4.0 °C), light (5.1 mol photons m^?2 d^?1), and Ω _arag (0.16 units) would have on coral growth rates based on established relationships derived from laboratory studies and found that they could account for approximately 44, 52, and 5 %, respectively, of the observed seasonal change of 81 ± 14 mmol CaCO₃ m^?2 d^?1. Using short-term light and dark incubations, we show how the covariance of light and Ω _arag can lead to the false conclusion that calcification is more sensitive to Ω _arag than it really is.     

Temporal and spatial environmental variability in the Upper Rhône River and its floodplain

• 1 This paper develops a framework of spatial and temporal variability for a habitat typology of the Upper Rhône River (France) and its alluvial floodplain that is based on about 17 years of data collection and analysis. The aim was to provide a scale of spatial-temporal variability for river habitat templet predictions on trends in species traits and species richness.
• 2 In developing this framework, eight physical-chemical variables were available and could be considered for twenty-two habitat types: seventeen superficial (surface) and five interstitial (0.5 m below the substrate surface). These habitat types were selected in two areas (Jons and Brégnier-Cordon) after geomorphological considerations and because of differences in their biological characteristics.
• 3 The data sets used were processed by a ‘fuzzy coding’ method using, for each variable, the frequency distribution (by modalities = categories) of all measurements and monthly means over an annual scale. Two tables were produced; the first corresponded to an expression of the total variability, and the second represented an evaluation of the temporal variability.
• 4 Each of these tables was analysed by correspondence analysis, which provided factorial scores that were used to calculate, by habitat type and by variable, a total variability and a temporal variability in terms of cumulated variability of factorial scores for the eight physical–chemical variables. The rationale in describing variability from these two tables is that total variability equals temporal variability plus spatial variability. The spatial variability was then determined by the difference between total and temporal variability. From this procedure, a positioning of the twenty-two habitat types on the spatial and temporal variability axes was obtained.
• 5 The estimate of spatial variability did not consider any error term that may have occurred in the above model; it was then tested by an independent assessment of the spatial variability using thirteen variables in nine major habitat types. A high correlation between the two ways of assessing spatial variability (r = 0.85, P < 0.004) underscored the reliability of the spatial variability that was calculated previously.
• 6 The river habitat templet obtained for the Upper Rhône and its alluvial floodplain appears to be appropriate to test the predictions on patterns of species traits and species richness in the framework of spatial and temporal variability.

     

Polychaetes associated with the sciaphilic alga community in the northern Aegean Sea: spatial and temporal variability

Polychaete biodiversity has received little attention despite its importance in biomonitoring. This study describes polychaete diversity, and its spatial and temporal variability in infralittoral, hard substrate assemblages. Seven stations were chosen in the central area of the northern Aegean Sea. At each station, one to three depth levels were set (15, 30 and 40 m). Five replicates were collected by scuba diving with a quadrat sampler (400 cm²) from each station and depth level during summer for the spatial analysis, and seasonally for the study of temporal changes. Common biocoenotic methods were employed (estimation of numerical abundance, mean dominance, frequency, Margalefs richness, Shannon-Weaver index and Pielous evenness). A total of 5,494 individuals, belonging to 79 species, were counted and classified. Diversity indices were always high. Clustering and multidimensional scaling techniques indicated a high heterogeneity of the stations, although these were all characterized by the sciaphilic alga community. A clear seasonal pattern was not detectable. Summer and autumn samples discriminate, while winter and spring form an even group. The abundance/biomass comparison indicated a dominance of k-strategy patterns, characteristic of stable communities.Communicated by H.-D. Franke     

The temporal and spatial distribution of the valves of the diatom Rhoicosphenia curvata in the River Wey

SUMMARY. During a study of the seasonal changes in the diatom flora of the River Wey, Surrey, it was found that valves of Rhoicosphenia curvata (Kütz.) Grunow were usually present in samples collected in the stretch of the river between Tilford and Guildford but not in any significant numbers either upstream or downstream of this region. More detailed study showed that a tributary, the Farnham Wey, was the source of this particular diatom and that downstream of the confluence of these rivers the numbers steadily decreased. Valves of Rhoicosphenia curvata were most numerous in suspension in the river during the summer months, although the living organism is an epiphyte growing and dividing vigorously during the early spring and even in late winter. It is suggested that dead cells and detached valves are released into the river, from its tributary, during the summer, there being no evidence that this organism can actively divide or survive as a member of the river plankton. The valves form a convenient marker for the mixing of two distinct bodies of water.     

The emergence of automated high-frequency flow cytometry: revealing temporal and spatial phytoplankton variability

Phytoplankton observation is the product of a number of trade-offsrelated to sampling processes, required level of diversity andsize spectrum analysis capabilities of the techniques involved.Instruments combining the morphological and high-frequency analysisfor phytoplankton cells are now available. This paper presentsan application of the automated high-resolution flow cytometerCytosub as a tool for analysing phytoplanktonic cells in theirnatural environment. High resolution data from a temporal studyin the Bay of Marseille (analysis every 30 min over 1 month)and a spatial study in the Southern Indian Ocean (analysis every5 min at 10 knots over 5 days) are presented to illustrate thecapabilities and limitations of the instrument. Automated high-frequencyflow cytometry revealed the spatial and temporal variabilityof phytoplankton in the size range 1–50 µm thatcould not be resolved otherwise. Due to some limitations (instrumentalmemory, volume analysed per sample), recorded counts could bestatistically too low. By combining high-frequency consecutivesamples, it is possible to decrease the counting error, followingPoisson’s law, and to retain the main features of phytoplanktonvariability. With this technique, the analysis of phytoplanktonvariability combines adequate sampling frequency and effectivemonitoring of community changes.     

Structure and spatial variability of mayfly (Ephemeroptera) communities in the upper Hron River basin

Mayflies were sampled from eleven sites in six tributaries of the upper Hron River. Mayfly communities were ordinated and related to environmental factors using multiple regression and principal component analysis. Communities of headwater sites were dominated by Rhithrogena iridina which was gradually replaced by Baetis alpinus, at the lower reaches. Total mayfly species richness was inversely related to stream slope and overall abundance was inversely related to altitude. The prominent factor influencing mayfly communities was a complex longitudinal gradient as proposed by the river continuum concept. There were no significant differences in community composition and structure between the left-and right-hand tributaries of the Hron River.     

Metabolic patch dynamics in small headwater streams: exploring spatial and temporal variability in benthic processes

1. To gain a better understanding of the heterotrophic nature of small headwater streams in forested landscapes we explored the spatial and temporal variability of in‐stream organic matter processes. Three methods were used to measure the benthic metabolism of different in‐stream habitats in seven streams throughout a calendar year. This allowed us to analyse the contribution of various metabolic habitats (i.e. sediment, leaf litter, cobbles) to in‐stream metabolism during a natural flow regime. Furthermore, it allowed us to define in‐stream patchiness based on functional rather than structural elements. 2. Bacterial growth, measured using a leucine assay, displayed a quadratic relationship over time with a peak in warmer months and consistently higher bacterial growth in fine depositional (3.00–710.64 mg C m^?2 day^?1) than coarse gravel (38.84–582.85 mg C m^?2 day^?1) sediments. 3. Community metabolism, measured using dissolved oxygen chambers, showed distinct diel patterns and consistently greater net daily metabolism in leaf packs (?261.76 to ?24.50 mg C m^?2 day^?1) than fine depositional sediments (?155.00 to ?15.56 mg C m^?2 day^?1). Coarse gravel sediments (?49.55 to ?16.88 mg C m^?2 day^?1) and cobble habitats (?151.98 to 55.38 mg C m^?2 day^?1) exhibited the lowest metabolic rates. Modelled whole‐stream metabolism was highly variable among streams and temporal patterns appeared driven by temperature and the relative contribution of patch configuration as a function of flow. 4. Cellulose decomposition potential showed higher rates of microbial activity in fine depositional compared to coarse gravel sediments (30.5 and 29.1 kg average cotton tensile strength loss respectively), though there were higher rates of thread loss indicative of macroinvertebrate activity in gravel compared to depositional sediment (21% and 13% average thread loss respectively), with a slight quadratic trend. The high variability among habitats, streams and over time in this integrative measure may be explained by variability in local microbial activity as well as the potential for macroinvertebrates to contribute across patches. 5. There were strong relationships among benthic processes and habitat structure, nutrient status, stream temperature and flow. Different habitats had distinct metabolic characteristics and these characteristics appear to influence stream food webs and biogeochemical cycling depending on the relative abundance of habitats. Generally, within habitat variability was less than among habitat variability and among stream variability was less than temporal variability. Hence, in terms of the spatial and temporal heterogeneity of benthic processes, these small headwater streams showed predictable metabolic patterns. However, there were few correlations between differing measures of benthic metabolism at the same patch and this suggests that caution should be taken when attempting to infer the rates of one level of metabolic activity (e.g. whole community metabolism) based on another (e.g. bacterial productivity).