Development of silver carp (Hypophthalmichthys molitrix) and bighead carp (Aristichthys nobilis) genetic maps using microsatellite and AFLP markers and a pseudo-testcross strategy

Silver carp (Hypophthalmichthys molitrix) and bighead carp (Aristichthys nobilis) are two of the four most important pond-cultured fish species inhabiting the major river basins of China. In the present study, genetic maps of silver carp and bighead carp were constructed using microsatellite and AFLP markers and a two-way pseudo-testcross strategy. To create the maps, 60 individuals were obtained from a cross of a single bighead carp (female) and a single silver carp (male). The silver carp map consisted of 271 markers (48 microsatellites and 223 AFLPs) that were assembled into 27 linkage groups, of which 22 contained at least four markers. The total length of the silver carp map was 952.2 cM, covering 82.8% of the estimated genome size. The bighead carp map consisted of 153 markers (27 microsatellites and 126 AFLPs) which were organized into 30 linkage groups, of which 19 contained at least four markers. The total length of the bighead carp map was 852.0 cM, covering 70.5% of the estimated genome size. Eighteen microsatellite markers were common to both maps. These maps will contribute to discovery of genes and genetic regions controlling traits in the two species of carp.     

Biochemical genetic comparison of bighead (Hypophthalmichthys molitrix), silver carp (Aristichthys nobilis), and their hybrids reared in Czechoslovakia

Incidental and/or uncontrolled hybridization between silver carp ( Hypophthalmichthys molitrix ) and bighead ( Aristichthys nobilis ) represents a serious problem in Czechoslovak aquaculture. This fact affects fitness traits very negatively in successive generations of hybrids. To solve this problem, 1076 individuals in a total of both H. molitrix. A. nobilis , and their hybrids in 12 groups from six rearing facilities were analysed. Twelve protein systems representing 21 presumptive loci were studied to analyse the electrophoretic patterns of their products using horizontal starch gel electrophoresis of blood and tissue extracts. Both species displayed identical electrophoretic patterns in MYO-I* , LDH-A *, LDH-B *, sMDH-1 *, sIDHP-3*, GPI-1*, and CK-I * loci. For a reliable differentiation of both species products of the following nine loci are applicable ALB *, PA *, TF, sMDH-2 *, SOD *, NDH *, MYO-IF , MYO-III *, and CK-2 *. In addition, some polymorphic variants in slDHP-1 *, sIDHP-2 *, LDH-C *, EST-II *, and GPI-2 * loci are of use as auxillary markers while the other variants are common to both species. A high level of gene introgression was evident through hybridization between both species. All groups declared previously as ' H. molifrix ' were actually confirmed biochemically to be H. molitrix . However, all groups declared as ' A. nobilis ' were proved to be a mixture of A. nobilis and its hybrids of different level with H. molitrix . This suggests it is impossible to distinguish between A. nobilis and hybrids using their external morphology only.     

清河水库鲢、鳙鱼种群动态研究Ⅰ.生产量的估计

本文根据Robson-Chapman公式估算了清河水库鲢、鳙可捕群体的残存率,计算了非捕捞群体的残存率和种群生产量。清河水库非捕捞群体平均年残存率约为0.25,可捕群体的平均年残存率鲢为0.32、鳙为0.38。鲢、鳙鱼种群生产量分别为141和110kg/ha,种群年P/B系数分别为1.15和1.09。鲢、鳙鱼获量仅为其生产量的33%和34%,库存生物量的36%。     

50年来长江鲢、鳙形态特征的变迁(英文)

采用多元分析方法,对采自长江中游的上世纪中期(下称早期)和本世纪初(下称当前)的121尾1龄鲢、鳙的30项形态度量性状进行了分析。依据对判别贡献最大的5个参数所建立的判别公式,对鲢、鳙早期和当前群体的平均判别准确率分别达94.2%和98.%,显示鲢或鳙的当前与早期群体间在总体上存在着显著差异。单因素方差分析显示,在早期和当前群体间,鲢有12个特征差异极显著、8个差异显著,鳙分别有8个特征差异极显著或显著。其中,鲢和鳙的6个显著或极显著变大的特征参数集中在头部,而14个鲢和10个鳙的显著或极显著变小的特征参数则主要集中在躯干部与尾部。研究表明,最近50年来长江鲢、鳙的头及头部特征有相对变大的趋势,而躯干部与尾部的许多特征参数则有相对变小的趋势,这些形态演变趋势符合人们喜食鱼头、追求高经济效益的期望。     

Partial characterization of transferrins of some species of the family Cyprinidae

1. Transferrins of five cyprinid fishes (Tinca tinca, Ctenopharyngodon idella, Chondrostoma nasus. Hypophthalmichthys molitrix and Aristichthys nobilis) were isolated in a pure state using Sephadex G-100, DEAE-Sephadex and SP-Sephadex. 2. All the transferrins are heterogeneous. In H. molitrix and A. nobilis the heterogeneity is caused partly, but not exclusively, by the presence of sialic acid; in the other species it is independent of sialic acid. 3. Molecular weights ranging from 69,900 (T. tinca) to 78,800 (H. molitrix) were obtained by sedimentation equilibrium ultracentrifugation. SDS-polyacrylamide gel electrophoresis with beta-mercaptoethanol indicated that the transferrins are composed of a single polypeptide chain. 4. Amino acid compositions of all species were similar, the greatest similarity being in the transferrins of H. molitrix and A. nobilis. 5. Carbohydrate was not found in transferrins of T. tinca and C. idella, but was present in A. nobilis (2.63%) and H. molitrix (5.01%). 6. Alanine was N-terminal in C. idella. No N-terminal amino acid was found in T. tinca, H. molitrix and A. nobilis.     

草鱼与鲢鱼肥胖基因克隆与序列分析

肥胖基因产物leptin是调节哺乳动物摄食、能量代谢等生命活动的重要细胞因子。 应用RT-PCR和RACE法获得了草鱼(Ctenopharyngodon idellus)和鲢鱼(Hypophthalmichthys molitrix) leptin基因的全长cDNA序列分别为1 096 bp和1 176 bp,编码173和172个氨基酸。氨基酸序列同源性分析表明,草鱼和鲢鱼的leptin序列与其它鲤科鱼类leptin的同源性较高,而与其他鱼类的leptin同源性很低,但所有鱼类的leptin均含有用于形成二硫键的高度保守的半胱氨酸。系统进化树分析显示,草鱼和鲢鱼leptin与其他鱼类leptin聚于一进化分支。应用PCR和Genome Walker方法,进一步获得了草鱼和鲢鱼leptin基因的内含子和5′侧翼区序列。结果表明,获得的草鱼和鲢鱼leptin基因长度分别为2 129 bp和2 192 bp,含有与其他脊椎动物leptin相似的基因结构（含三个外显子和两个内含子）。本研究为深入研究鱼类肥胖基因结构功能关系与鱼类抗肥胖品系定向遗传选育奠定了良好的基础。     

Zooplankton community dynamics along the bigheaded carp invasion front in the Upper Mississippi River

Hydrobiologia - Invasive Silver Hypophthalmichthys molitrix and Bighead Carp H. nobilis (collectively bigheaded carp) regularly alter zooplankton communities in lentic systems but dynamics in lotic...     

洱海鲢、鳙的食物组成及与太湖新银鱼的食性重叠研究

为了研究鲢（Hypophthalmichthys molitrix）、鳙（Aristichthys nobilis）两种鱼食物组成的空间变化,分析了2010年7月至2011年10月在洱海古生和北部两采样点逐月采集或收集的共93尾鲢和71尾鳙的肠道内含物,对其食物组成的季节变化、空间变化及与太湖新银鱼（Neosalanx taihuensis）的食物重叠进行了研究。结果表明,鲢、鳙全年摄食的饵料生物数分别为75 属和 64属。根据相对重要性指数（IRI%）,微囊藻（Microcystis）和象鼻溞（Bosmina）为两种鱼的主要饵料类群。鲢、鳙的食物组成呈明显的季节变化,这与饵料生物的季节变化密切相关。在空间上,两种鱼在古生摄食的浮游植物比例大于北部,这是由不同区域饵料生物组成差异导致的结果。Schoener重叠指数显示鲢、鳙与太湖新银鱼之间的食性重叠不显著（E0.6）。       

Digestive enzyme pattern of two stomachless filter feeders, silver carp, Hypophthalmichthys molitrix Val., and bighead carp, Aristichthys nobilis Rich.

Activities of digestive enzymes (trypsin and amylase) of microplanktophagous silver carp, Hypophthalmichthys molitrix , and macroplanktophagous bighead carp, Aristichthys nobilis , were investigated in relation to pH in 10 different segments of the gut. In addition, the possible existence of 'classical' lysozyme in both species and cellulase in silver carp were scrutinized, but no activities were detected. Tryptic and amylolytic activities decreased sharply from fore-gut to hind-gut indicating an efficient reabsorption mechanism. Trypsin and amylase of both species had a pH optimum at 8.3 and 7.0 respectively. The relatively low pH of 6.4 in the fore-gut of silver carp did not support an efficient operation of these enzymes, which was compensated by a higher enzyme concentration as compared to bighead carp. The latter, however, showed a higher pH of 7.3 in the fore-gut and thereby maintained similar activities as silver carp. The distinction of herbivorous and omnivorous fish in terms of digestion mechanisms is discussed.     

First U.K. recording in the wild of the bighead carp Hypophthalmichthys nobilis

Five specimens of bighead carp Hypophthalmichthys nobilis were captured from a lake in eastern England in January 2006, their first confirmed recording in the wild in the U.K. They varied in fork lengths from 746 to 796 mm and mass from 10·0 to 13·5 kg. All the fish were age 9 years and were slow growing compared to populations elsewhere in their expanded range.     

Does aquatic invasive species removal benefit native fish? The response of gizzard shad (Dorosoma cepedianum) to commercial harvest of bighead carp (Hypophthalmichthys nobilis) and silver carp (H. molitrix)

Hydrobiologia - Bighead carp (Hypophthalmichthys nobilis) and silver carp (H. molitrix), collectively known as Asian carp, are planktivorous fishes that have invaded aquatic ecosystems throughout...     

Characterization of microsatellite loci in silver carp (Hypophthalmichthys molitrix), and cross‐amplification in other cyprinid species

Captive populations of silver carp (Hypophthalmichthys molitrix), a major aquaculture species in Asia, would undoubtedly benefit from genetic monitoring and improvement programs. We report the isolation and preliminary characterization of 16 microsatellite loci derived from both conventional and microsatellite‐enriched libraries. Inheritance studies confirmed the allelic nature of observed polymorphisms at all loci, while identifying null alleles at two loci. These loci, having varying degrees of polymorphism, should provide useful markers for applied genetic studies. A high degree of cross‐amplification among 10 other cyprinid species suggests that these loci may have more widespread utility.     

Comparative study on the gut microbiotas of four economically important Asian carp species

Gut microbiota of four economically important Asian carp species(silver carp, Hypophthalmichthys molitrix; bighead carp,Hypophthalmichthys nobilis; grass carp, Ctenopharyngodon idella; common carp, Cyprinus carpio) were compared using 16 S rRNA gene pyrosequencing. Analysis of more than 590,000 quality-filtered sequences obtained from the foregut, midgut and hindgut of these four carp species revealed high microbial diversity among the samples. The foregut samples of grass carp exhibited more than 1,600 operational taxonomy units(OTUs) and the highest alpha-diversity index, followed by the silver carp foregut and midgut. Proteobacteria, Firmicutes, Bacteroidetes and Fusobacteria were the predominant phyla regardless of fish species or gut type. Pairwise(weighted) UniFrac distance-based permutational multivariate analysis of variance with fish species as a factor produced significant association(P0.01). The gut microbiotas of all four carp species harbored saccharolytic or proteolytic microbes, likely in response to the differences in their feeding habits. In addition, extensive variations were also observed even within the same fish species. Our results indicate that the gut microbiotas of Asian carp depend on the exact species, even when the different species were cohabiting in the same environment. This study provides some new insights into developing commercial fish feeds and improving existing aquaculture strategies.     

Erythrocyte measurements of diploid and triploid Ctenopharyngodon idella×Hypophthalmichthys nobilis hybrids

Diploid and triploid hybrids resulted when grass carp, Ctenopharyngodon idella , and big-head carp, Hypophthalmichthys nobilis , were experimentally hybridized. Erythrocyte size can be used to distinguish C. idella × H. nobilis hybrids of different ploidies.     

Molecular characterization of glutathione peroxidase gene from the liver of silver carp, bighead carp and grass carp

The cDNAs encoding glutathione peroxidase (GPx) were cloned and sequenced from the liver of three Chinese carps with different tolerance to hepatotoxic microcystins, phytoplanktivorous silver carp (Hypophthalmichthys molitrix) and bighead carp (Aristichthys nobilis), and herbivorous grass carp (Ctenopharyngodon idellus). Using genome walker method, a 750 bp 5'-flanking region of the silver carp GPx gene was obtained, and several potential regulatory elements were identified in the promoter region of the GPx gene. The silver carp GPx gene was widely expressed in all tissues examined. Despite phylogenetic analysis, assigning this newly described carp GPx to the group of mammalian GPx2, the carp GPx seems more similar to GPx1 from a physiological point of view. The constitutive expression pattern of the three carp liver GPx gene, shows a positive relationship with their tolerance to microcystins.     

Native bighead carp Hypophthalmichthys nobilis and silver carp Hypophthalmichthys molitrix populations in the Pearl River are threatened by Yangtze River introductions as revealed by mitochondrial DNA

Bighead carp Hypophthalmichthys nobilis and silver carp Hypophthalmichthys molitrix have been two economically important aquaculture species in China for centuries. In the past decades, bighead and silver carp have been introduced from the Yangtze River to many river systems in China, including the Pearl River, in annual, large-scale, stocking activities to enhance wild fisheries. Nonetheless, few studies have assessed the ecological or genetic impacts of such introductions on native conspecific fish populations. An mtDNA D-loop segment of 978 bp from 213 bighead carp samples from 9 populations and a 975 bp segment from 204 silver carp samples from 10 populations were obtained to evaluate genetic diversity and population integrity. Results from a haplotype network analysis revealed that most haplotypes of the Pearl River clustered with those of Yangtze River origin and only a small proportion were distinct, suggesting that both the native Pearl River bighead and silver carp populations are currently dominated by genetic material from the Yangtze River. The genetic diversity of Pearl River populations is high in both species because of this inter-population gene flow, but the diversity of native Pearl River populations is low. To preserve the native genetic diversity, stocking of non-native fingerlings should cease immediately and native Pearl River bighead and silver carp fish farms should be established. This research demonstrates the danger to native biodiversity across China because of the substantial, ongoing stock-enhancement activities without prior genetic assessment.     

Mortalities induced by the copepod Sinergasilus polycolpus in farmed silver and bighead carp in a reservoir

The frequency distributions of the parasitic copepod Sinergasilus polycolpus were examined in silver carp Hypophthalmichthys molitrix and bighead carp Aristichthys nobilis during a disease outbreak of the 2 species of fish in a reservoir in China. The mean abundance of the copepod was positively related with host length and age, and the overdispersion of the copepod in both silver and bighead carp was fitted well with negative binomial distribution. Although parasite-induced host mortality was observed, a peaked age-parasite abundance curve was not detected in the present parasite-host system. It is also proposed that this peaked age-abundance curve is unlikely to be observed in its natural host populations.     

The hearing abilities of the silver carp (Hypopthalmichthys molitrix) and bighead carp (Aristichthys nobilis)

Concern regarding the spread of silver carp (Hypopthalmichthys molitrix) and bighead carp (Aristichthys nobilis) through the Illinois River has prompted the development of a Bio-acoustic Fish Fence (BAFF) to act as an acoustic fish deterrent. The application of this technology has resulted in a need to understand the auditory physiology of the target species, in order to maximise the effect of the barrier in preventing the migration of the non-indigenous carp species into Lake Michigan, whilst minimising the effect on indigenous fish populations. Therefore, the hearing thresholds of 12 H. molitrix and 12 A. nobilis were defined using the Auditory Brainstem Response (ABR) technique, in a pressure-dominated sound field generated by submerged transducers of the type used in the construction of the BAFF system. The results clearly show that these fish are most sensitive to sounds in a frequency bandwidth of between 750 Hz and 1500 Hz, with higher thresholds below 300 Hz and above 2000 Hz.