Adjacent woodlands rather than habitat connectivity influence grassland plant,carabid and bird assemblages in farmland landscapes

One response to biodiversity decline is the definition of ecological networks that extend beyond protected areas and promote connectivity in human-dominated landscapes. In farmland, landscape ecological research has focused more on wooded than open habitat networks. In our study, we assessed the influence of permanent grassland connectivity, described by grassland amount and spatial configuration, on grassland biodiversity. We selected permanent grasslands in livestock farming areas of north-western France, which were sampled for plants, carabids and birds. At two spatial scales we tested the effects of amount and configuration of grasslands, wooded habitats and crops on richness and abundance of total assemblages and species ecological groups. Grassland connectivity had no significant effects on total richness or abundance of any taxonomic group, regardless of habitat affinity or dispersal ability. The amount of wooded habitat and length of wooded edges at the 200 m scale positively influenced forest and generalist animal groups as well as grassland plant species, in particular animal-dispersed species. However, for animal groups such as open habitat carabids or farmland bird specialists, the same wooded habitats negatively influenced richness and abundance at the 500 m scale. The scale and direction of biodiversity responses to landscape context were therefore similar among taxonomic groups, but opposite for habitat affinity groups. We conclude that while grassland connectivity is unlikely to contribute positively to biodiversity, increasing or maintaining wooded elements near grasslands would be a worthwhile conservation goal. However, the requirements of open farmland animal species groups must be considered, for which such action may be deleterious.     

Multiscale assessment of the influence of habitat structure and composition on bird assemblages in boreal forest

The relative contributions of habitat structure and composition to biodiversity are often scale-dependent. Although bird communities in boreal forest have been largely altered and threatened by forest harvesting, bird habitat selection in this ecosystem has not been fully understood. Our study aimed to assess the relative contributions of habitat structure and composition on the assemblages of boreal birds at multiple spatial scales characterized by radii ranging from 100 to 1,000?m. We recorded bird species occurrence at 96 stations located in an old-growth forest in the C?te-Nord region of Québec, Canada. We characterized habitat structure using the proportion of dense, open, and sparse stands, and habitat composition using the proportions of coniferous, mixedwood, and deciduous stands. We used partial canonical correspondence analyses and hierarchical variance partitioning to assess the relative contribution of habitat structure and composition on bird assemblage, and logistic regression to model the probability of occurrence for individual species in response to habitat variables. Our results revealed that habitat structure and composition explained similar proportions of the variance in bird assemblage (21.7 vs. 21.6?%), regardless of spatial scale. Whilst logistic regression yielded fair predictions in the occurrence of individual species (i.e., area under the receiver-operating characteristic curve >0.70 for 90?% of the species), it further confirmed our findings in community level analysis. Our study indicates that habitat structure and composition are both important in shaping bird assemblages, but spatial scale draws little influence on their relative contributions.     

Functional and phylogenetic structure of forest and savanna bird assemblages across spatial scales

Ecological and evolutionary mechanisms that drive community assembly vary in space and time. However, little is known about how such mechanisms act in contrasting habitats. Here, we estimated the functional and phylogenetic structure of forest and savanna bird assemblages across different spatial scales to understand: 1) the mechanisms that govern the structure of assemblages in these habitats; 2) the relationship between phylogenetic and functional structure; and 3) the influence of species richness on the functional and phylogenetic structure of assemblages. We used a null model where forest and savanna bird species were allowed to occur in the same null assemblages and other where species were separated based on their habitats. According to the first null model, forest bird assemblages were functionally and phylogenetically clustered at all spatial scales, whereas savanna bird assemblages generally showed random functional and phylogenetic structure. These results can be explained by the low dispersal rate of forest species across of the patchy habitats and the widespread distribution of savanna species. However, in the second null model, both forest and savanna bird assemblages showed random functional and phylogenetic structure at regional and local scales. This suggests that trait‐based assembly might not play an important role in both habitats and across different spatial scales. In addition, the phylogenetic and functional structure of assemblages were not correlated, evidencing that caution is necessary when using phylogenetic relationships as a surrogate to functional distances among species. Finally, the relationships between species richness and functional and phylogenetic structure indicated that an increase in the number of species can promote both clustering and overdispersion, depending on the studied habitat and scale. Our study shows that integrating different types of habitat, spatial scales and biodiversity components in a single framework can shed light on the mechanisms that determine the community assembly.     

The influence of changes in habitat structure on the species composition of bird assemblages in the southern Kalahari

Land use management practices often change habitat structure, which in turn influence diversity and the composition of floral and faunal assemblages. In the southern Kalahari, southern Africa, heavy grazing after above‐average rainfall has lead to bush thickening, and widespread use of arboricides and/or removal of large trees for firewood has also impacted habitat structure. At sites near Kimberley, in South Africa, we investigated the effects of these changes on bird species richness and which aspects of habitat structure most influenced bird assemblage diversity and composition. We also investigated correlations between bird life history traits and habitat characteristics using RLQ analysis. Bird species richness and abundance were both explained by vertical habitat heterogeneity and density of woody species between the heights of 0–2 m, with bird species richness also explained by the density of woody species at heights above 6 m. Large trees within bush‐thickened areas dampened the effects of bush thickening on bird assemblages by enabling certain species to persist, consistent with the idea that large trees are keystone structures. Smaller insectivorous gleaners, ball‐ and cup‐nesters, birds with parts of their range extending into arid areas and birds with long‐wavelength plumage (i.e. red, orange or yellow plumage) dominated bush‐thickened habitats. Seed‐eaters, burrow‐ and ground‐nesters, bark‐foragers, birds that perch and sally, or perch and swoop to the ground, were all negatively associated with bush thickening. Cavity‐nesters, bark‐foragers, hawkers, frugivores, birds that perch and sally and species with iridescent plumage were negatively affected by the loss of large trees. Of the common species analysed, nearly 40% of species had life history traits tied to large trees; and 68% had traits negatively associated with bush thickening and removal of large trees together, suggesting that where these changes in habitat occur simultaneously, bird diversity will be strongly affected.     

Short-term effects of recent land-use changes in Eastern Austria on farmland bird assemblages in a human-dominated landscape

To study effects of short-term land-use changes on birds in a predominantly agriculturally used landscape in Northeastern Austria, birds were surveyed in 22 circular study areas with a diameter of 1 km in 2005 and 2009. Because of the abolition to obligate set-aside land from 2008, it was suspected that the amount of set-aside land would be reduced dramatically. Consequently, a loss of farmland birds was expected. Results show that the amount of set-aside land indeed decreased significantly between 2005 and 2009 from 15.05% to 9.69% (mean proportion of set-aside land per study area). Farmland birds were represented by 20 species in both years. Neither richness and abundance nor species composition of farmland birds were affected by changes of set-aside land. The amount of set-aside land in these landscapes was already high (compared to other areas in Austria) before the amendment of the law and still relatively high after it. Therefore, perhaps changes in the extent of set-aside land were below the threshold to find detectable effects on farmland birds.     

The effects of habitat structure on predation risk of birds in agricultural landscapes

It has been suggested that increased predation rates may rival habitat alteration as a causal agent in farmland bird population declines. Such a view may be over-simplistic, however, as changes in habitat structure may influence habitat selection and foraging efficiency through their influence on perceived and actual predation risk. We review evidence from the literature on the effects of habitat structure on predation risk of foraging and nesting birds and apply these principles to investigate the likely effects on the 20 species that comprise the UK Government's 'Farmland Bird Index'. Shorter vegetation is likely to enhance foraging efficiency and reduce predation risk (when ground foraging) for 15 of the 20 species. However, within grassland systems longer vegetation is known to enhance food supplies (e.g. Tipulid larvae and voles) of several farmland bird species and so mosaics of short and long vegetation may provide the optimum conditions for most species (e.g. Lapwing Vanellus vanellus , Starling Sturnus vulgaris , Barn Owl Tyto alba ). Agricultural intensification has encouraged uniform dense swards, thus reducing habitat diversity, and agri-environment schemes that provide heterogeneous sward structure may thus facilitate farmland bird conservation. Intensification has also resulted in less dense hedgerows; although a reversal of this trend may improve foraging efficiency for many species, it may be detrimental to a smaller number of species that prefer shorter, less dense hedges for nesting. Before these tentative conclusions can be confirmed, more research is required that considers how the effects of habitat structure on individuals is likely to translate into population-level impacts.     

Land-cover and land-use change and its contribution to the large-scale organization of Puerto Rico's bird assemblages

Global biodiversity is changing rapidly driven by human alteration of habitat, and nowhere this is more dramatic than in insular habitats. Yet land-cover change is a complex phenomenon that not only involves habitat destruction but also forest recovery over different time scales. Therefore, we might expect species to respond in diverse ways with likely consequences for the reorganization of regional assemblages. These changes, however, may be different in tropical islands because of their low species richness, generalist habits and high proportion of endemics. Here, we focus on the island of Puerto Rico and ask how island-wide changes in land cover and land use has influenced the large-scale organization of bird assemblages. To address this question, we combined in a Geographical Information System (GIS) the first 6 years (1997–2002) of the Puerto Rican Breeding Bird Survey (PR-BBS) with land-cover and land-use data extracted from a published digital map derived from the classification of Landsat images. A Non-metric Multidimensional Scaling (NMS) ordination based on the composition and abundance of birds, and percentage land-use types showed that land use followed by climate could explain most of the variation observed among routes in terms of species composition and abundance. Moreover, endemic and exotic species were widely distributed throughout the island, but the proportion of endemic species is higher in closed forests while exotic species are more abundant in open habitats. However, historical accounts from the early 1900s indicate that endemic species were distributed across the entire island. Today, most of the land cover transformation in Puerto Rico occurs in the lowlands which may explain the high abundance of endemic species in cloud forests and the high abundance of exotic species in open habitats in the lowlands.     

Patterns of bird diversity and habitat use in mixed vineyard-matorral landscapes of Central Chile

The Mediterranean climate region of central Chile is rich in biodiversity and contains highly productive agricultural lands, which creates challenges for the preservation of natural habitats and native biodiversity. Ecological data and studies for the region are also limited, making informed conservation in agricultural landscapes difficult. The increasing availability of remotely sensed data provide opportunities to relate species occurrences to measures of landscape heterogeneity even when field measures of habitat structure are lacking. When working with such remotely sensed data, it’s important to select appropriate measures of heterogeneity, including common metrics of landscape composition as well as frequently overlooked shape metrics. In this contribution we combine bird surveys with multispectral satellite imagery to develop boosted regression tree models of avian species richness, and of habitat use for 15 species across a mixed vineyard-matorral landscape in central Chile. We found a range of associations between individual species and land cover types, with the majority of species occurring most frequently in remnant habitats and ecotones rather than the interiors of large vineyard blocks. Models identified both metrics of landscape composition and patch shape as being important predictors of species occurrence, suggesting that shape metrics can complement more commonly used metrics of landscape composition. Vineyards that include corridors or islands of remnant habitat among vine blocks may increase the amount of area available to many species, although some species may still require large tracts of intact natural habitat to persist.     

The relative influence of habitat amount and configuration on genetic structure across multiple spatial scales

Despite strong interest in understanding how habitat spatial structure shapes the genetics of populations, the relative importance of habitat amount and configuration for patterns of genetic differentiation remains largely unexplored in empirical systems. In this study, we evaluate the relative influence of, and interactions among, the amount of habitat and aspects of its spatial configuration on genetic differentiation in the pitcher plant midge, Metriocnemus knabi. Larvae of this species are found exclusively within the water‐filled leaves of pitcher plants (Sarracenia purpurea) in a system that is naturally patchy at multiple spatial scales (i.e., leaf, plant, cluster, peatland). Using generalized linear mixed models and multimodel inference, we estimated effects of the amount of habitat, patch size, interpatch distance, and patch isolation, measured at different spatial scales, on genetic differentiation (F_ST) among larval samples from leaves within plants, plants within clusters, and clusters within peatlands. Among leaves and plants, genetic differentiation appears to be driven by female oviposition behaviors and is influenced by habitat isolation at a broad (peatland) scale. Among clusters, gene flow is spatially restricted and aspects of both the amount of habitat and configuration at the focal scale are important, as is their interaction. Our results suggest that both habitat amount and configuration can be important determinants of genetic structure and that their relative influence is scale dependent.     

Alpine bird distributions along elevation gradients: the consistency of climate and habitat effects across geographic regions

Many species have shown recent shifts in their distributions in response to climate change. Patterns in species occurrence or abundance along altitudinal gradients often serve as the basis for detecting such changes and assessing future sensitivity. Quantifying the distribution of species along altitudinal gradients acts as a fundamental basis for future studies on environmental change impacts, but in order for models of altitudinal distribution to have wide applicability, it is necessary to know the extent to which altitudinal trends in occurrence are consistent across geographically separated areas. This was assessed by fitting models of bird species occurrence across altitudinal gradients in relation to habitat and climate variables in two geographically separated alpine regions, Piedmont and Trentino. The ten species studied showed non-random altitudinal distributions which in most cases were consistent across regions in terms of pattern. Trends in relation to altitude and differences between regions could be explained mostly by habitat or a combination of habitat and climate variables. Variation partitioning showed that most variation explained by the models was attributable to habitat, or habitat and climate together, rather than climate alone or geographic region. The shape and position of the altitudinal distribution curve is important as it can be related to vulnerability where the available space is limited, i.e. where mountains are not of sufficient altitude for expansion. This study therefore suggests that incorporating habitat and climate variables should be sufficient to construct models with high transferability for many alpine species.     

Temperature affects the timing and duration of fungal fruiting patterns across major terrestrial biomes

The Earth's ecosystems are affected by a complex interplay of biotic and abiotic factors. While global temperatures increase, associated changes in the fruiting behaviour of fungi remain unknown. Here, we analyse 6.1 million fungal fruit body (mushroom) records and show that the major terrestrial biomes exhibit similarities and differences in fruiting events. We observed one main fruiting peak in most years across all biomes. However, in boreal and temperate biomes, there was a substantial number of years with a second peak, indicating spring and autumn fruiting. Distinct fruiting peaks are spatially synchronized in boreal and temperate biomes, but less defined and longer in the humid tropics. The timing and duration of fungal fruiting were significantly related to temperature mean and variability. Temperature-dependent aboveground fungal fruiting behaviour, which is arguably also representative of belowground processes, suggests that the observed biome-specific differences in fungal phenology will change in space and time when global temperatures continue to increase.     

Disentangling the relative importance of changes in climate and land-use intensity in driving recent bird population trends

Threats to biodiversity resulting from habitat destruction and deterioration have been documented for many species, whilst climate change is regarded as increasingly impacting upon species' distribution and abundance. However, few studies have disentangled the relative importance of these two drivers in causing recent population declines. We quantify the relative importance of both processes by modelling annual variation in population growth of 18 farmland bird species in the UK as a function of measures of land-use intensity and weather. Modelled together, both had similar explanatory power in accounting for annual fluctuations in population growth. When these models were used to retrodict population trends for each species as a function of annual variation in land-use intensity and weather combined, and separately, retrodictions incorporating land-use intensity were more closely linked to observed population trends than retrodictions based only on weather, and closely matched the UK farmland bird index from 1970 onwards. Despite more stable land-use intensity in recent years, climate change (inferred from weather trends) has not overtaken land-use intensity as the dominant driver of bird populations.     

The effects of individual interactions and habitat preferences on spatial structure in a grassland bird community

Spatial structure and the distribution of individuals within a community might be influenced by several factors such as habitat heterogeneity and local interactions among individuals of the same and different species. We investigated the spatial distributions of eight bird species in a grassland community during the breeding season and examined whether the spatial distributions of individuals were influenced by interactions among neighboring individuals or different habitat preferences of different bird species.
In order to identify the effects of the interactions among neighboring individuals and habitat preference, we developed a randomization test in which species identifications were randomly allocated to the observed individual positions within areas with the same vegetation structure. The randomization test indicated that individuals tend to have territories near the territories of individuals of the same species or of a particular species more frequently (or less frequently) than those expected from random distributions of individuals.
Among these associations, only one case was explained by individual interactions, and 19 cases were explained by habitat preference.
The results suggest that both individual interactions and habitat preference affected the spatial distributions of individuals and possibly influence the species compositions and diversity in grassland bird communities.     

Productivity, organism size, and the trophic structure of the major terrestrial biomes

I present a hypothesis suggesting that terrestrial biomes' productivity determines the size of the major organisms and plant physiognomy in them and consequently determines their trophic structure. I suggest a more comprehensive set of patterns over current hypotheses, which consider productivity alone. Based on my hypothesis, I predict that the number of trophic levels decreases with increasing productivity from four in hot deserts to two in productive grasslands and that there are three to four trophic levels in all types of forested biomes. I also suggest that productivity is the limiting factor for the number of trophic levels at the lower end of the terrestrial productivity gradient, herbivore size is the limiting factor at intermediate productivities, and plant physiognomy is the limiting factor in the high productivity range. This contradicts existing hypotheses that predict either an increase (Am Nat 118:240–261, 1981; Am Nat 155:703–723, 2000) or no change (Am Nat 142:379–411, 1993) in the number of trophic levels with the increase in biome productivity.     

Comparative structure and ontogeny of the foliar domatia in three neotropical myrmecophytes

The origin and timing of the appearance of leaf domatia during the ontogeny of plants are important evolutionary traits driving the maintenance of ant-plant associations. In this study conducted in French Guiana on Hirtella physophora, Maieta guianensis, and Tococa guianensis, we focused on the formation and development of leaf domatia having different morphological origins. We modeled the timing of the onset of these domatia, then compared their morpho-anatomical structure. Although the ontogenetic development of the domatia differed between species, they developed very early in the plant's ontogeny so that we did not note differences in the timing of the onset of these domatia. For H. physophora seedlings, a transitional leaf forms before the appearance of fully developed domatia, whereas in M. guianensis and T. guianensis the domatia forms abruptly without transitional leaves. Moreover, in all cases, the morpho-anatomical structure of the domatia differed considerably from the lamina. All three species had similar morpho-anatomical characteristics for the domatia, indicating a convergence in their structural and functional characteristics. This convergence between taxonomically distant plant species bearing domatia having different morphological origins could be interpreted as a product of the plant's evolution toward the morphology and anatomy most likely to maximize ant recruitment and long-term residence.     

Spatial scale and evolutionary history determine the degree of taxonomic homogenization across island bird assemblages

It is widely documented that human activities have elevated the extirpation of natural populations as well as the successful introduction to new areas of non-native species. These dual processes of introduction and extirpation can change the similarity of communities, but the direction and magnitude these changes take are likely to depend on the manner in which introductions and extirpations occur, the spatial scale at which the changes are measured, and the initial similarity of the communities before the human-induced drivers occurred. Here, we explore patterns of extirpation and introduction and their influence on the similarity of global oceanic island bird assemblages from four different Oceans (Atlantic, Caribbean, Indian, Pacific). We show that different historical patterns of introduction and extirpation have produced varying trends in compositional similarity both between islands within archipelagos and between islands across different archipelagos within the same ocean. Patterns of bird assemblage convergence (i.e. taxonomic homogenization) or divergence (i.e. taxonomic differentiation) among islands depended on the scale of examination, the evolutionary associations among species of the region, and the cultural history of human colonization. These factors are all likely to be leading to a series of multiple interacting processes that are shaping the complex compositional changes observed among global island bird faunas over time.     

Effects of habitat simplification on assemblages of cavity nesting bees and wasps in a semiarid neotropical conservation area

Habitat complexity is directly correlated to insect diversity in most natural environments. Structural complexity reflects an increase in vertical stratification and plant diversity and often leads to a greater availability of floral resources and nesting sites. Efficient conservation strategies require understanding of how changes in habitat structure affect insects that provide essential ecosystem services. We analyzed how the diversity and species composition of bees and wasps that nest in pre-existing cavities is affected by habitat complexity. Our study was developed in the semiarid region of northeastern Brazil, in the Ubajara National Park and surrounding area. Four types of habitats within two physiognomies were sampled for two consecutive years. We used 120 trap-nest (9000 cavities) distributed in 40 sample points. Overall, 657 cavities were occupied by 11 species of bees, nine of wasps, and six of cleptoparasitic/parasitoids. Bees and wasp diversity increases with habitat complexity. While species richness was higher in more complex physiognomies, abundance was higher in disturbed areas. Species composition also varied with habitat structure. Habitat simplification has adverse effects on the diversity and composition of assemblages. These effects are stronger in more complex habitats indicating that conservation of humid habitats within semiarid areas is essential to maintain bee and wasp regional diversity.     

Beetle assemblages in ponds: effects of habitat and site age

• 1 Water beetle assemblages were sampled in each of 18 freshwater ponds, including 11 recently constructed sites designed to provide mitigation for wetlands destruction elsewhere, and seven older reference sites. There were three objectives: (a) to relate taxon richness and biomass of the beetles to the same properties of the wider aquatic invertebrate community, (b) to evaluate changes in beetle assemblage structure over time, and (c) to determine habitat effects on taxonomic composition, mean body size and trophic guild structure of the beetle assemblage.
• 2 Forty‐seven beetle genera were identified, representing 77 species. The beetles represented an average of 21.5% of total generic richness, but only 3.7% of total wet biomass of the wider invertebrate community.
• 3 Of all variables evaluated using canonical correspondence analysis (CCA), site age had the greatest influence on the beetle assemblage. Predatory dytiscids were early colonists at younger sites, while herbivorous curculionids and chrysomelids associated with particular types of vegetation typically occurred in older ponds. Mitigation ponds and reference ponds supported similar numbers of species. Reference sites, however, harboured substantially more unique species found at only a single site within the study area.
• 4 The presence of fish was also strongly related to beetle assemblage structure. Ponds with few or no fish contained about 3‐fold higher biomass and 3‐fold greater mean wet weight per individual compared to ponds with substantial fish assemblages.
• 5 Beetle assemblage composition varied among sites and sampling years, but beetle biomass, richness and species composition may be useful tools in evaluating the success of wetland mitigation efforts.