Associations between strain,herd size,age at first calving,culling reason and lifetime performance characteristics in Holstein-Friesian cows

Cow longevity and lifetime performance traits are good indicators of breeding effectiveness and animal welfare. They are also interrelated with the economics of dairy herd. Unfortunately, a high milk yield is often associated with deteriorated cow health and fertility and, consequently, with an increased culling rate. This situation, observed also in the Polish population of Holstein-Friesian cattle, inspired us to undertake a study on the associations between some factors and lifetime performance characteristics. The data set consisted of the records on 135 496 cows, including 131 526 of the Black and White strain (BW), and 3970 of the Red and White strain (RW) covered by performance recording and culled in 2012. It was found that cows of the BW strain and those from the largest herds (>100 cows) reached higher lifetime and mean daily energy-corrected milk (ECM) yields than cows of the RW strain and those from smaller herds culled at a similar age. Cows youngest at first calving (<2.0 years) were characterised by the highest lifetime ECM yield. It indicates that heifers can be bred even when they are younger than 15 to 16 months with no significant negative effect on their later performance. Infertility and reproduction problems (39.6%) and udder diseases (15.5%) constituted the most frequent reasons for cow culling. Cow longevity and lifetime productivity were considerably affected by the interactions between the studied factors.     

Associations between the breeding values of Holstein-Friesian bulls and longevity and culling reasons of their daughters

Taking into account functional traits in the breeding practice should lead to a longer productive life of cows. However, despite the increased contribution of these traits in bull selection indices, their daughters are frequently culled as early as the 2nd or 3rd lactation. The problem is whether and to what extent the genetic potential of animals is realized in the production practice. Therefore, the purpose of this study was to determine the associations between the breeding value (BV) of bulls and their daughters for cow longevity and culling reasons in the Holstein-Friesian cattle population in Poland. Data for 532 062 cows culled in 2012, 2015, and 2018 were analyzed. A majority of 5 045 cow sires originated from Poland, Germany, France, the Netherlands, and the United States. The highest variation in the contribution of culling reasons was for the cows culled at the age of 2–4 years. The contribution of the culling reasons, analyzed in relation to the cow culling age, remained similar and the only exception was culling because of old age, for which a significant increase was observed only for the culling age of at least 9 years (13.8%), which was reached by only 7.3% of the cows. The sires were characterized by generally high BV for conformation and reproductive traits. However, they had, at most, the average genetic potential for functional longevity. There were a number of beneficial associations found between the BV of bulls and the distribution of culling reasons in their daughters. For example, it concerns relations between the somatic cell score in milk and culling due to udder diseases and low milk yield, between the interval from calving to first insemination and low milk yield, between the protein yield and old age, or between the BV for certain conformation traits (size, udder) and cow culling due to age. In these cases, as the BV increased for a given trait, the contribution of the corresponding cow culling reason tended to decrease. Our study showed that it seems reasonable to consider Holstein-Friesian cows aged at least 9 years at culling to be long-living animals. This is primarily evidenced by the rapid increase in the culling due to old age in relation to younger cows. Nowadays the above age limit can be suggested as a criterion of longevity for Holstein-Friesian cows but the criterion should be updated to the relation genotype-environment-economy that tends to change over time.     

Associations between herd size, rate of expansion and production, breeding policy and reproduction in spring-calving dairy herds

Dairy herd size is expected to increase in many European countries, given the recent policy changes within the European Union. Managing more cows may have implications for herd performance in the post-quota era. The objective of this study was to characterise spring-calving herds according to size and rate of expansion, and to determine trends in breeding policy, reproduction and production performance, which will inform industry of the likely implications of herd expansion. Performance data from milk recording herds comprising 775,795 lactations from 2,555 herds for the years 2004 to 2008 inclusive were available from the Irish Cattle Breeding Federation. Herds were classified into Small (average of 37 cows), Medium (average of 54 cows) and Large (average of 87 cows) and separately into herds that were not expanding (Nil expansion), herds expanding on average by three cows per year (Slow expansion) and herds expanding on average by eight cows per year (Rapid expansion). There was no association between rate of expansion and 305-day fat and protein yield. However, 305-day milk yield decreased and milk protein and fat percentage increased with increasing rate of expansion. There were no associations between herd size and milk production except for protein and fat percentage, which increased with increasing herd size. Average parity number of the cows decreased as rate of expansion increased and tended to decrease as herd size increased. In rapidly expanding herds, cow numbers were increased by purchasing more cattle. The proportion of dairy sires relative to beef sires used in the breeding programme of expanding herds increased and there was more dairy crossbreeding, albeit at a low rate. Similarly, large herds were using more dairy sires and fewer beef sires. Expanding herds and large herds had superior reproductive performance relative to non-expanding and small herds. Animals in expanding herds calved for the first time at a younger age, had a shorter calving interval and were submitted for breeding by artificial insemination at a higher rate. The results give confidence to dairy producers likely to undergo significant expansion post-quota such that, despite managing more cows, production and reproductive performance need not decline. The management skills required to achieve these performance levels need investigation.     

Reproductive disorders in dairy cattle: I. Respective influence of herds, seasons, milk yield and parity

This study was performed in two large dairy units (with 130 and 213 calving cows each) during one year. The objectives were to investigate 1) epidemiological patterns of main post-partum reproductive disorders (metritis, post-partum and post-service anestrus, repeat breeding and embryonic death) and 2) the impact of herd, calving season, milk yield and parity on these patterns. Approximately 20% of the cows in both herds were not affected by any of the disorders. Prevalence of metritis was high (32 to 44%) and appeared influenced by the herds' conditions interacting with calving months and milk yield effects. Cyclic post-partum anestrus incidence was also essentially affected by the herd effect with an added seasonal interaction. Other disorders in both herds were also primarily subjected to the seasonal effect. Individual milk yield and parity only marginally affected the epidemiological patterns. We concluded that even in similar environmental conditions, no general patterns of incidence of reproductive disorders can be drawn and that they are essentially dependent on the characteristics of each herd management.     

Analysis of culling probability in dairy buffalo using survival models

In order to contribute to the genetic breeding programs of buffaloes, this study aimed to determine the influence of environmental effects on the stayability (ST) of dairy female Murrah buffalo in the herd. Data from 1016 buffaloes were used. ST was defined as the ability of the female to remain in the herd for 1, 2, 3, 4, 5 or 6 years after the first calving. Environmental effects were studied by survival analysis, adjusted to the fixed effects of farm, year and season of birth, class of first-lactation milk yield and age at first calving. The data were analyzed using the LIFEREG procedure of the SAS program that fits parametric models to failure time data (culling or ST = 0), and estimates parameters by maximum likelihood estimation. Breeding farm, year of birth and first-lactation milk yield significantly influenced (P < 0.0001) the ST to the specific ages (1 to 6 years after the first calving). Buffaloes that were older at first calving presented higher probabilities of being culled 1 year after the first calving, without any effect on culling at older ages. Buffaloes with a higher milk yield at first calving presented a lower culling probability and remained for a longer period of time in the herd. The effects of breeding farm, year of birth and first-lactation milk yield should be included in models used for the analysis of ST in buffaloes.     

Reproductive performance in Ohio dairy herds in the 1990s

The objective of this study was to evaluate trends in reproductive performance in Ohio dairy herds during the 1990s. Stringent criteria for herd inclusion were applied to DHI records to ensure high quality and reliability of the data. The final data set contained 44,425 monthly herd summary records from 1772 herds from years 1992, 1994, 1996 and 1998. Outcomes of interest were calving interval length, calving-to-conception interval, days to first breeding, services per conception and first service conception rate. PROC MIXED in SAS (version 8.1) was used and the monthly records were treated as repeated measures nested within years and herds. First-order autoregressive covariance structure was used to model the covariance between the repeated measures within herds. The data were analyzed for the entire herd as well as for the first lactation cows separately. During the 1990s reproductive performance declined in Ohio dairy herds. Herd average calving interval lengthened from 13.6 to 14.1 months and calving-to-conception interval increased from 136 to 150 days between 1992 and 1998, respectively. Days to first service and number of services increased while first service conception rate declined on a herd level. The reproductive performance of first lactation cows, however, remained constant during this same period. Overall herd reproductive performance was associated with herd size and fat-corrected rolling herd average milk production (FCM). As milk yield increased, first service conception rate decreased and services per conception increased. Larger herds had lower first service conception rate and needed more services per conception, but they started breeding their cows earlier resulting in a slightly shorter calving interval and calving-to-conception interval compared to smaller herds.     

Effect of pregnancy on the genetic evaluation of dairy cattle

We investigated the effect of stage of pregnancy on estimates of breeding values for milk yield and milk persistency in Gyr and Holstein dairy cattle in Brazil. Test-day milk yield records were analyzed using random regression models with or without the effect of pregnancy. Models were compared using residual variances, heritabilities, rank correlations of estimated breeding values of bulls and cows, and number of nonpregnant cows in the top 200 for milk yield and milk persistency. The estimates of residual variance and heritabilities obtained with the models with or without the effect of pregnancy were similar for the two breeds. Inclusion of the effect of pregnancy in genetic evaluation models for these populations did not affect the ranking of cows and sires based on their predicted breeding values for 305-day cumulative milk yield. In contrast, when we examined persistency of milk yield, lack of adjustment for the effect of pregnancy overestimated breeding values of nonpregnant cows and cows with a long days open period and underestimated breeding values of cows with a short days open period. We recommend that models include the effect of days of pregnancy for estimation of adjustment factors for the effect of pregnancy in genetic evaluations of Dairy Gyr and Holstein cattle.     

Breed of cow and herd productivity affect milk nutrient recovery in curd,and cheese yield,efficiency and daily production

Little is known about cheese-making efficiency at the individual cow level, so our objective was to study the effects of herd productivity, individual herd within productivity class and breed of cow within herd by producing, then analyzing, 508 model cheeses from the milk of 508 cows of six different breeds reared in 41 multi-breed herds classified into two productivity classes (high v. low). For each cow we obtained six milk composition traits; four milk nutrient (fat, protein, solids and energy) recovery traits (REC) in curd; three actual % cheese yield traits (%CY); two theoretical %CYs (fresh cheese and cheese solids) calculated from milk composition; two overall cheese-making efficiencies (% ratio of actual to theoretical %CYs); daily milk yield (dMY); and three actual daily cheese yield traits (dCY). The aforementioned phenotypes were analyzed using a mixed model which included the fixed effects of herd productivity, parity, days in milk (DIM) and breed; the random effects were the water bath, vat, herd and residual. Cows reared in high-productivity herds yielded more milk with higher nutrient contents and more cheese per day, had greater theoretical %CY, and lower cheese-making efficiency than low-productivity herds, but there were no differences between them in terms of REC traits. Individual herd within productivity class was an intermediate source of total variation in REC, %CY and efficiency traits (10.0% to 17.2%), and a major source of variation in milk yield and dCY traits (43.1% to 46.3%). Parity of cows was an important source of variation for productivity traits, whereas DIM affected almost all traits. Breed within herd greatly affected all traits. Holsteins produced more milk, but Brown Swiss cows produced milk with higher actual and theoretical %CYs and cheese-making efficiency, so that the two large-framed breeds had the same dCY. Compared with the two large-framed breeds, the small Jersey cows produced much less milk, but with greater actual and theoretical %CYs, similar efficiencies and a slightly lower dCY. Compared with the average of the specialized dairy breeds, the three dual-purpose breeds (Simmental and the local Rendena and Alpine Grey) had, on average, similar dMY, lower actual and theoretical %CY, similar fat and protein REC, and slightly greater cheese-making efficiency.     

Comparison of reproductive performance by artificial insemination versus natural service sires in California dairies

This study compared the calving to conception intervals for cows in AI pens with cows exposed to natural service sires, controlling for milk production, mastitis occurrence, parity and calving month effects. Records from 10 western United States dairy herds (mean herd size = 2058 cows) were evaluated retrospectively over an 18-month period. Eight bull breeding analysis cohorts were created (the first cohort 0-50 days in milk and the remaining cohorts at 25 days in milk intervals through 226 days). The cohorts contained non-pregnant cows that were first moved into bullpens during the described cohort period. Equal numbers of non-pregnant cows only exposed to AI during the cohort period were randomly selected from the pool of eligible non-pregnant cows. An AI cow was used only once in the data analysis, but was included in a bull breeding cohort at a later date if she remained non-pregnant and was transferred to a bullpen. Univariate and multivariate survival analysis was used to compare the calving to conception intervals. Cows in AI groups had higher hazard rates for pregnancy across all cohorts. Parity and milk production were significantly associated with risk for pregnancy. In herds that practice a mixture of AI and bull breeding, overall herd reproductive performance might be improved by allowing cows more opportunities at AI prior to moving them into clean-up bullpens.     

The relationship of the interval from breeding to uterine palpation for pregnancy diagnosis with calving outcomes in holstein cows

This study used data collected prospectively at 32 dairy herds to examine the effect of interval from breeding to uterine palpation for pregnancy diagnosis on calving interval and likelihood of calving. Multivariable statistical models were used to control for other factors that were significantly associated with the outcomes of interest. Cows diagnosed pregnant from 30 to 36 d post breeding had 2-wk longer calving intervals than cows palpated at later intervals. The interval from breeding until a cow was diagnosed open had a significant positive association with the calving interval. The interval to palpation was not associated with the probability of remaining in the herd to calve when controlling for the effects of herd, season of freshening, number of services, days to first service and mature equivalent milk production. Among cows diagnosed pregnant, 3.4% subsequently were bred and 1.5% were diagnosed open by palpation at a later date. About 5% of the cows diagnosed open calved at a time consistent with being pregnant when the diagnosis was made.     

Initial insights on the performances and management of dairy cattle herds combining two breeds with contrasting features

Finding ways of increasing animal production with low external inputs and without compromising reproductive performances is a key issue of livestock systems sustainability. One way is to take advantage of the diversity and interactions among components within livestock systems. Among studies that investigate the influence of differences in animals’ individual abilities in a herd, few focus on combinations of cow breeds with contrasting features in dairy cattle herds. This study aimed to analyse the performances and management of such multi-breed dairy cattle herds. These herds were composed of two types of dairy breeds: ‘specialist’ (Holstein) and ‘generalist’ (e.g. Montbeliarde, Simmental, etc.). Based on recorded milk data in southern French region, we performed ANOVA: (i) to compare the performances of dairy herds according to breed-type composition: multi-breed, single specialist breed or single generalist breed and (ii) to test the difference of milk performances of specialist and generalist breed cows (n = 10 682) per multi-breed dairy herd within a sample of 22 farms. The sampled farmers were also interviewed to characterise herd management through multivariate analysis. Multi-breed dairy herds had a better trade-off among milk yield, milk fat and protein contents, herd reproduction and concentrate-conversion efficiency than single-breed herds. Conversely, they did not offer advantages in terms of milk prices and udder health. Compared to specialist dairy herds, they produce less milk with the same concentrate-conversion efficiency but have better reproductive performances. Compared to generalist dairy herds, they produce more milk with better concentrate-conversion efficiency but have worse reproductive performances. Within herds, specialist and generalist breed cows significantly differed in milk performances, showing their complementarity. The former produced more milk for a longer lactation length while the latter produced milk with higher protein and fat contents and had a slightly longer lactation rank. Our results also focus on the farmers’ management of multi-breed dairy herds underlying herd performances. Three strategies of management were identified and structured along two main axes. The first differentiates farmers according to their animal-selection practices in relation with their objectives of production: adapting animal to produce milk with low-feeding inputs v. focussing on milk yield trait to intensify milk production. The second refers to the purpose farmers give to multi-breed dairy herds: milk v. milk/meat production. These initial insights on the performances and management of multi-breed dairy herds contribute to better understanding the functioning of ruminant livestock systems based on individual variability.     

Comparison of reproductive performance in Belgian dairy and beef cattle

A computerized program was written to collect, evaluate and compare reproductive performance data of 2004 beef (Belgian Blue breed) and 1649 dairy (Friesian Holstein and German Red) cattle in 35 Belgian herds (6 suckler beef herds, 9 milked beef herds and 20 dairy herds). Reproduction data were collected at monthly herd health visits. No difference in age at first calving was observed. Significant differences were observed among the 3 kinds of herds, and the best results were obtained in dairy herds for the calving interval, interval from calving to the first estrus, interval from calving to the first service and average number of days open. Concerning these parameters, first calvers had lower results than multiparous cows, mainly in suckler and milked beef herds. Significant differences were noted in the number of services per pregnancy. Heifers that had never calved presented the highest fertility. Primiparous beef cows had higher fertility than pluriparous cows. In dairy herds, pluriparous cows had higher fertility than primiparous cows. Estrus detection was better in milked beef herds than in suckled beef and dairy herds. Suckled beef herds had the lowest incidence of metritis and ovarian cysts of the three types of herds. Rates of abortion, overall culling and retained fetal membranes were similar in all the herds. The percentage of animals removed for infertility was highest in milked beef herds and lowest in dairy herds. Because 90% of the 1159 calvings recorded in the beef herds required a caesarean section, the reproductive performance of beef cattle represent results after caesarean section.     

To meet or not to meet welfare outcome thresholds: a case-control study in dairy cow herds

Recently published thresholds allow classifying dairy cattle herds according to target, caution and alert ranges for welfare outcomes. Such normative thresholds provide one way to transparently assess production practices and are a straightforward communication tool with farmers. In an ordinal response case-control study, we investigated associations of animal, management and resource-related indicators with the risk of exceeding thresholds of prevalence for lameness, claw disorders, integument alterations and leg cleanliness. To this end, we used cumulative logistic regression models on 264 tethered and 392 loose-housed Austrian dairy herds. In tethered herds, the risk indicator average lactation milk yield was positively associated with the probability to exceed thresholds for integument alteration prevalence but negatively regarding leg cleanliness. Associations were also found for operation type regarding integument alterations (lower risk on organic vs conventional farms), for herd size regarding lameness (negative association) and dirty upper hind leg (positive association), and for percentage of fifth or higher parity cows in the herd regarding dirty lower hind leg (positive association). Stall type was identified as risk indicator regarding claw disorders (lower risk of long vs short stands). In loose housing systems, none of the analysed risk indicators was associated with the probability to exceed thresholds for total lameness and claw disorder prevalence. Negative associations with the probability to exceed caution or alert thresholds were identified for lifetime milk yield (dirty upper hind leg), lactation milk yield (dirty upper and lower hind leg), percentage of cows in the herd with a fat-protein-ratio <1 (integument alterations), and percentage of cows in the herd with a fat-protein-ratio >1.5 (dirty upper hind leg). Pasture access showed negative (severe lameness, integument alterations) and herd size positive associations (severe lameness) with the probability to exceed thresholds. Deep litter cubicles compared to raised cubicles with rubber mats showed a lower probability to exceed thresholds (integument alterations, dirty lower hind leg) as well as solid rubber compared to concrete slatted flooring in alleyways (integument alterations). Assessments carried out during the pasture period compared to during winter housing were associated with a lower risk of exceeding thresholds for leg cleanliness measures in both, tethered and loose-housed herds, and for integument alteration prevalence in tethered herds. In conclusion, no principal risk indicator was identified which consistently determined the probability of exceeding predefined thresholds of considered welfare outcomes. Nevertheless, outcome-specific factors show sufficient impact on the categorisation of farms according to prevalence ranges.     

Genome-wide association study for longevity in the Holstein cattle population

Longevity is one of the most important traits determining dairy cow profitability. In the last decades dairy cows suffered a lowering in the age at culling. With the aim to identify the genes involved in longevity, dates of birth, yields, dates of calving during lifespan and culling dates were collected for 946 culled cows which had been genotyped with the Bovine High Density panel. Using the GenABEL package in R, genome-wide association analysis was performed on three potential traits of longevity: (1) ‘days in production,’ (2) ‘days in herd,’ (3) number of calvings over lifespan.’ Five genome-wide significant single nucleotide polymorphisms (SNPs) associated with all three longevity traits were detected. Several consecutive SNPs identified on chromosomes 16 and 30 indicated the presence of two suggestive quantitative trait loci (QTL). The genes comprised in the QTL regions had biological functions related to fertility, reproductive disorders, heat stress and welfare of cows. These findings might contribute to improving breeding strategies to improve longevity.     

Paratuberculosis: decrease in milk production of German Holstein dairy cows shedding Mycobacterium avium ssp. paratuberculosis depends on within-herd prevalence

Paratuberculosis impairs productivity of infected dairy cows because of reduced milk production and fertility and enhanced risk of culling. The magnitude of the milk yield depression in individual cows is influenced by factors such as parity, the stage of the disease and the choice of test used. The objectives of this case–control study were to substantiate the influence of the different levels of the within-herd prevalence (WHP) on individual milk yield of fecal culture (FC)-positive cows (FC+) compared with FC-negative herd-mates (FC−), and to estimate the magnitude of the deviation of the milk yield, milk components and somatic cell count (SCC) in an FC-based study. Of a total of 31 420 cows from 26 Thuringian dairy herds tested for paratuberculosis by FC, a subset of 1382 FC+ and 3245 FC− with milk recording data were selected as cases and controls, respectively. The FC− cows were matched for the same number and stage of lactation (±10 days in milk) as one FC+ from the same herd. Within a mixed model analysis using the fixed effects of Mycobacterium avium ssp. paratuberculosis (MAP) status, lactation number, days in milk, prevalence class of farm and the random effect of farm on milk yield per day (kg), the amount of fat and protein (mg/dl) and lactose (mg/dl) as well as the SCC (1000/ml) were measured. On the basis of least square means, FC+ cows had a lower test-day milk yield (27.7±0.6 kg) compared with FC− (29.0±0.6 kg), as well as a lower milk protein content and a slightly diminished lactose concentration. FC status was not associated with milk fat percentage or milk SCC. In FC+ cows, reduction in milk yield increased with increasing WHP. An interaction of FC status and farm was found for the test-day milk yield, and milk protein percentage, respectively. We conclude that the reduction in milk yield of FC+ cows compared with FC− herd-mates is significantly influenced by farm effects and depends on WHP class. Owners of MAP-positive dairy herds may benefit from the reduction in WHP not only by reducing number of infected individuals but also by diminishing the individual losses in milk production per infected cow, and therefore should establish control measures.     

Relationship between incidence of milk fever and feeding of minerals during the last 3 weeks of gestation

This study evaluated whether differences in milk fever incidence among Swedish dairy herds could be explained partly by differences in mineral feeding during the last weeks of gestation. A case–control study was performed on dietary risk factors for a high incidence of milk fever at the herd level using information regarding feeding and management of the dry cows collected in a written questionnaire distributed by post in spring 2008. The study was conducted from September 2004 to August 2007. Data on the diets fed to dry cows, with an emphasis on the amounts of minerals (Ca, P, Mg and K) fed 3 weeks before calving and at calving, were obtained from 30 herds belonging to the 100 Swedish herds with the highest recorded incidence of veterinary treatment for milk fever (>8.8%) and from 22 herds with no recorded milk fever treatments. Multivariable logistic regression analysis showed that a linear increase in the total amount of K and less than 26 g of Mg/day fed to dry cows 3 weeks before calving was associated with an increased risk of high milk fever incidence. A large increase in the amount of dry matter (DM) fed (>3.1 kg DM extra per day at calving compared with 3 weeks before calving) was associated with a higher incidence of milk fever, but no differences were found for Ca or P intake. Breed composition, herd average milk yield and age composition of the herd did not explain any of the observed differences between the case and the control herds. The results indicate that differences in the frequency of milk fever among herds can be associated with differences in mineral feeding of the dry cows. A high amount of K in the diet may increase the risk of milk fever linearly, whereas Mg should probably be fed at a higher level than the current Nordic recommendation to prevent milk fever.     

Merging and characterising phenotypic data on conventional and rare traits from dairy cattle experimental resources in three countries

This study set out to demonstrate the feasibility of merging data from different experimental resource dairy populations for joint genetic analyses. Data from four experimental herds located in three different countries (Scotland, Ireland and the Netherlands) were used for this purpose. Animals were first lactation Holstein cows that participated in ongoing or previously completed selection and feeding experiments. Data included a total of 60 058 weekly records from 1630 cows across the four herds; number of cows per herd ranged from 90 to 563. Weekly records were extracted from the individual herd databases and included seven traits: milk, fat and protein yield, milk somatic cell count, liveweight, dry matter intake and energy intake. Missing records were predicted with the use of random regression models, so that at the end there were 44 weekly records, corresponding to the typical 305-day lactation, for each cow. A total of 23 different lactation traits were derived from these records: total milk, fat and protein yield, average fat and protein percentage, average fat-to-protein ratio, total dry matter and energy intake and average dry matter intake-to-milk yield ratio in lactation weeks 1 to 44 and 1 to 15; average milk somatic cell count in lactation weeks 1 to 15 and 16 to 44; average liveweight in lactation weeks 1 to 44; and average energy balance in lactation weeks 1 to 44 and 1 to 15. Data were subsequently merged across the four herds into a single dataset, which was analysed with mixed linear models. Genetic variance and heritability estimates were greater (P < 0.05) than zero for all traits except for average milk somatic cell count in weeks 16 to 44. Proportion of total phenotypic variance due to genotype-by-environment (sire-by-herd) interaction was not different (P > 0.05) from zero. When estimable, the genetic correlation between herds ranged from 0.85 to 0.99. Results suggested that merging experimental herd data into a single dataset is both feasible and sensible, despite potential differences in management and recording of the animals in the four herds. Merging experimental data will increase power of detection in a genetic analysis and augment the potential reference population in genome-wide association studies, especially of difficult-to-record traits.     

Relationships between type and longevity in the Holstein breed

The relationship between type traits and longevity was studied in the French Holstein breed using a survival analysis model. In this model, the phenotypic value adjusted for systematic fixed effects, the estimated breeding value, or the residual value (defined as the difference between the adjusted phenotypic value and the estimated breeding value) of the cow for each type trait was included as a risk factor. This was done separately for two subpopulations (registered and nonregistered herds) and with or without adjustment for production traits, i.e., considering true or functional longevity. For both types of herds, udder traits (and above all, udder depth) clearly influenced the length of productive life. There seemed to be a more pronounced voluntary culling on type traits in registered herds. The correction for the within herd-year class of production traits, as a way to approximate functional longevity, increased the importance of udder traits and decreased the weight of capacity traits. The same results were obtained when the phenotypic value of the cow for type was replaced by her estimated breeding value, whereas residuals had little impact. The relationship between longevity and type traits was most often nonlinear, in particular for udder traits, but in this study, no trait with a clear intermediate optimum was found.     

Comparison of Boer, Kiko, and Spanish meat goat does for stayability and cumulative reproductive output in the humid subtropical southeastern United States

ABSTRACT: BACKGROUND: Longevity is the amount of time breeding females stay active in a herd by avoiding death or culling because of illness or reproductive failure. This is a trait of economic relevance in commercial small ruminant breeding herds as it affects lifetime reproductive output. The purpose of this study was to determine if breed of meat goat influences breeding doe survival rates and cumulative reproductive performance under semi-intensive management. RESULTS: Boer (n[THIN SPACE]=[THIN SPACE]132), Kiko (n[THIN SPACE]=[THIN SPACE]92) and Spanish (n[THIN SPACE]=[THIN SPACE]79) does were evaluated for longevity trends and cumulative kid production. The herd was managed on humid subtropical pasture. Does had the chance to complete 2 to 6 production years. Survival curves were analyzed for 2 culling methods. The actual culling practice removed does after two failures to wean a kid. An alternative culling protocol removed doe records after the first failure to wean a kid. Kid production traits analyzed across herd life were the total number of kids weaned and cumulative kid weight weaned to the 2-, 3-, and 5-year stayability endpoints. Most (82 %) doe exits were illness-related under the actual culling method. Reproductive failure represented 51 % of doe exits under the alternative culling protocol. Boer does had greater survival declines (P[THIN SPACE]<[THIN SPACE]0.01) from 2 to 6 years of herd life compared to Kiko and Spanish under both culling protocols. Boer does had lower stayability rates (P[THIN SPACE]<[THIN SPACE]0.01) at each year endpoint for both culling protocols. Under the alternative protocol, over 50 % of Boer does failed to complete 2 years, whereas over 50 % of Kiko and Spanish does successfully completed 4 years. Boer does had lower (P[THIN SPACE]<[THIN SPACE]0.01) total number of kids weaned and cumulative weight weaned through each stayability endpoint compared to Kiko and Spanish. CONCLUSION: Boer does had low stayability and cumulative kid production rates compared to Kiko and Spanish does. Poor health was the primary driver of does exiting the herd. Kiko and Spanish does did not differ for longevity and lifetime performance indicators.