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1.
Hsien-Wei Yeh Kuan-Hung Lin Syue-Yi Lyu Yi-Shan Li Chun-Man Huang Yung-Lin Wang Hao-Wei Shih Ning-Shian Hsu Chang-Jer Wu Tsung-Lin Li 《Acta Crystallographica. Section D, Structural Biology》2019,75(8):733-742
p‐Hydroxymandelate oxidase (Hmo) is a flavin mononucleotide (FMN)‐dependent enzyme that oxidizes mandelate to benzoylformate. How the FMN‐dependent oxidation is executed by Hmo remains unclear at the molecular level. A continuum of snapshots from crystal structures of Hmo and its mutants in complex with physiological/nonphysiological substrates, products and inhibitors provides a rationale for its substrate enantioselectivity/promiscuity, its active‐site geometry/reactivity and its direct hydride‐transfer mechanism. A single mutant, Y128F, that extends the two‐electron oxidation reaction to a four‐electron oxidative decarboxylation reaction was unexpectedly observed. Biochemical and structural approaches, including biochemistry, kinetics, stable isotope labeling and X‐ray crystallography, were exploited to reach these conclusions and provide additional insights. 相似文献
2.
Elisa Beneventi Gianluca Ottolina Giacomo Carrea Walter Panzeri Giovanni Fronza Peter C.K. Lau 《Journal of Molecular Catalysis .B, Enzymatic》2009,58(1-4):164-168
Recombinant cyclopentadecanone monooxygenase from Pseudomonas sp. catalyzed the preparative-scale Baeyer–Villiger oxidation of numerous 3 and 17-ketosteroids with a full control of the regiochemistry of the produced lactones. The recovered product yields were up to 42%. 相似文献
3.
Syue-Yi Lyu Kuan-Hung Lin Hsien-Wei Yeh Yi-Shan Li Chun-Man Huang Yung-Lin Wang Hao-Wei Shih Ning-Shian Hsu Chang-Jer Wu Tsung-Lin Li 《Acta Crystallographica. Section D, Structural Biology》2019,75(10):918-929
The Y128F single mutant of p‐hydroxymandelate oxidase (Hmo) is capable of oxidizing mandelate to benzoate via a four‐electron oxidative decarboxylation reaction. When benzoylformate (the product of the first two‐electron oxidation) and hydrogen peroxide (an oxidant) were used as substrates the reaction did not proceed, suggesting that free hydrogen peroxide is not the committed oxidant in the second two‐electron oxidation. How the flavin mononucleotide (FMN)‐dependent four‐electron oxidation reaction takes place remains elusive. Structural and biochemical explorations have shed new light on this issue. 15 high‐resolution crystal structures of Hmo and its mutants liganded with or without a substrate reveal that oxidized FMN (FMNox) possesses a previously unknown electrophilic/nucleophilic duality. In the Y128F mutant the active‐site perturbation ensemble facilitates the polarization of FMNox to a nucleophilic ylide, which is in a position to act on an α‐ketoacid, forming an N5‐acyl‐FMNred dead‐end adduct. In four‐electron oxidation, an intramolecular disproportionation reaction via an N5‐alkanol‐FMNred C′α carbanion intermediate may account for the ThDP/PLP/NADPH‐independent oxidative decarboxylation reaction. A synthetic 5‐deaza‐FMNox cofactor in combination with an α‐hydroxyamide or α‐ketoamide biochemically and structurally supports the proposed mechanism. 相似文献
4.
Chenchen Wang Miranda Gibson Jurgen Rohr Marcos A. Oliveira 《Acta Crystallographica. Section F, Structural Biology Communications》2005,61(11):1023-1026
The Baeyer–Villiger monooxygenase MtmOIV from Streptomyces argillaceus is a 56 kDa FAD‐dependent and NADPH‐dependent enzyme that is responsible for the key frame‐modifying step in the biosynthesis of the natural product mithramycin. Crystals of MtmOIV were flash‐cooled and diffracted to 2.69 Å resolution using synchrotron radiation on beamline SER‐CAT 22‐ID at the Advanced Photon Source. Crystals of MtmOIV are monoclinic and light‐scattering data reveal that the enzyme forms dimers in solution. The rotation function suggests the presence of two dimers in the asymmetric unit. l ‐Selenomethionine‐incorporated MtmOIV has been obtained. Structural solution combining molecular‐replacement phases and anomalous phases from selenium is in progress. 相似文献
5.
Loreto P. Parra Juan P. Acevedo Manfred T. Reetz 《Biotechnology and bioengineering》2015,112(7):1354-1364
6.
Marko D. Mihovilovic Radka Snajdrova Birgit Grtzl 《Journal of Molecular Catalysis .B, Enzymatic》2006,39(1-4):135-140
Screening of 4,4-disubstituted and 3,4,5-polysubstituted cyclohexan- and cyclohexenones with eight different overexpression systems of microbial monooxygenases in recombinant Escherichia coli provided valuable information about substrate acceptance and enantioselectivity of this enzyme family, which are responsible for the stereoselective Baeyer–Villiger biooxidation of ketones. For this purpose whole-cell mediated biotransformations were realized to overcome some limitations in the application of cofactor dependent biocatalysts. The different behavior of various enzymes reflects a recent hypothesis about two distinct clusters of biooxidation catalysts. In contrast to isolated enzyme biooxidations, recombinant cells did not yield unsaturated lactone products derived from cycloalkenones. They rather displayed reductase activity to reduce such precursors to saturated ketones, which were subsequently oxidized to the corresponding Baeyer–Villiger products in a sequential two-step biotransformation. 相似文献
7.
Zambianchi F Pasta P Carrea G Colonna S Gaggero N Woodley JM 《Biotechnology and bioengineering》2002,78(5):489-496
The performance, in Baeyer-Villiger and heteroatom oxidations, of a partially purified preparation of cyclohexanone monooxygenase obtained from an Escherichia coli strain in which the gene of the enzyme was cloned and overexpressed was investigated. As model reactions, the oxidations of racemic bicyclo[3.2.0]hept-2-en-6-one into two regioisomeric lactones and of methyl phenyl sulphide into the corresponding (R)-sulphoxide were used. Enzyme stability and reuse, substrate and product inhibition, product removal, and cofactor recycling were evaluated. Of the various NADPH regeneration systems tested, 2-propanol/alcohol dehydrogenase from Thermoanerobium brockii appeared the most suitable because of the low cost of the second substrate and the high regeneration rate. Concerning enzyme stability, kosmotropic salts were the only additives able to improve it (e.g., half-life from 1 day in diluted buffer to 1 week in 1 M sodium sulphate) but only under storage conditions. Instead, significant stabilization under working conditions was obtained by immobilization on Eupergit C (half-life approximately 2.5 days), a procedure that made it possible to reuse the catalyst up to 16 times with complete substrate (5 g x L(-1)) conversion at each cycle. Reuse of free enzyme was also achieved in a membrane reactor but with lower efficiency. Water-organic solvent biphasic systems, which would overcome substrate inhibition and remove from the aqueous phase, where reaction takes place, the formed product, were unsuccessful because of their destabilizing effect on cyclohexanone monooxygenase. More satisfactory was continuous substrate feeding, which shortened reaction times and, very importantly, yielded in the case of bicyclo[3.2.0]hept-2-en-6-one (10 g x L(-1)) both lactone products with high optical purity (enantiomeric excess > or = 96%), which was not the case when all of the substrate was added in a single batch. 相似文献
8.
Ishar MP Raj T Agrawal SK Saxena AK Singh L Singh R Bhella SS 《Bioorganic & medicinal chemistry letters》2008,18(17):4809-4812
Baeyer–Villiger oxidation of 5-aryl-7,11,11-trimethyltricyclo[5.4.0.03,6]-undec-1-en-4-ones 4a–h by H2O2 and formic acid in methanol yields mixtures of 3b,7,7-trimethyl-3-phenyl-3,3a,3b,4,5,6,7,8a-octahydro-1H-indeno-[1,2-c]furan-1-ones 8a–h and 3b,7,7-trimethyl-3-phenyl-3,3a,3b,4,5,6,7,8a-octahydro-1H-indeno-[1,2-c]furan-2-ones 9a–h in high yields. The obtained butyrolactones 8a–h display cytotoxic activity against a number of human cancer cells. 相似文献
9.
10.
Moonen MJ Rietjens IM van Berkel WJ 《Journal of industrial microbiology & biotechnology》2001,26(1-2):35-42
The biological Baeyer–Villiger oxidation of acetophenones was studied by 19F nuclear magnetic resonance (NMR). The 19F NMR method was used to characterise the time-dependent conversion of various fluorinated acetophenones in either whole cells
of Pseudomonas fluorescens ACB or in incubations with purified 4′-hydroxyacetophenone monooxygenase (HAPMO). Whole cells of P. fluorescens ACB converted 4′-fluoroacetophenone to 4-fluorophenol and 4′-fluoro-2′-hydroxyacetophenone to 4-fluorocatechol without the
accumulation of 4′-fluorophenyl acetates. In contrast to 4-fluorophenol, 4-fluorocatechol was further degraded as evidenced
by the formation of stoichiometric amounts of fluoride anion. Purified HAPMO catalysed the strictly NADPH-dependent conversion
of fluorinated acetophenones to fluorophenyl acetates. Incubations with HAPMO at pH 6 and 8 showed that the enzymatic Baeyer–Villiger
oxidation occurred faster at pH 8 but that the phenyl acetates produced were better stabilised at pH 6. Quantum mechanical
characteristics explained why 4′-fluoro-2′-hydroxyphenyl acetate was more sensitive to base-catalysed hydrolysis than 4′-fluorophenyl
acetate. All together, 19F NMR proved to be a valid method to evaluate the biological conversion of ring-substituted acetophenones to the corresponding
phenyl acetates, which can serve as valuable synthons for further production of industrially relevant chemicals. Journal of Industrial Microbiology & Biotechnology (2001) 26, 35–42.
Received 20 April 2000/ Accepted in revised form 16 September 2000 相似文献
11.
普查了 7个科 11种植物的乙醇酸氧化酶 (GO) ,发现其酶蛋白与黄素单核苷酸 (FMN)的结合均是松弛的 ;并据此特征找到了一种温和的制备完全脱FMNGO的新方法 ,酶液总活性回收可达 87.5 % ;外加FMN可使脱辅因子GO不同程度地恢复活性 ,恢复 5 0 %活性所需FMN的浓度为 8× 10 -7mol/L ,而当浓度大于 5× 10 -6mol/L时其复活作用达到 10 0 % ,表明两者间存在一个可逆的解离平衡。推测植物体内的FMN浓度可能是乙醇酸氧化酶活性的一个调节因子。 相似文献
12.
Samit Kumar Dutta Pedro Serrano Michael Geralt Herbert L. Axelrod Qingping Xu Scott A. Lesley Adam Godzik Ashley M. Deacon Marc‐André Elsliger Ian A. Wilson Kurt Wüthrich 《Protein science : a publication of the Protein Society》2015,24(10):1600-1608
Flavodoxins in combination with the flavin mononucleotide (FMN) cofactor play important roles for electron transport in prokaryotes. Here, novel insights into the FMN‐binding mechanism to flavodoxins‐4 were obtained from the NMR structures of the apo‐protein from Lactobacillus acidophilus (YP_193882.1) and comparison of its complex with FMN. Extensive reversible conformational changes were observed upon FMN binding and release. The NMR structure of the FMN complex is in agreement with the crystal structure (PDB ID: 3EDO ) and exhibits the characteristic flavodoxin fold, with a central five‐stranded parallel β–sheet and five α‐helices forming an α/β‐sandwich architecture. The structure differs from other flavoproteins in that helix α2 is oriented perpendicular to the β‐sheet and covers the FMN‐binding site. This helix reversibly unfolds upon removal of the FMN ligand, which represents a unique structural rearrangement among flavodoxins. 相似文献
13.
The binding condition between flavin mononucleotide (FMN) and protein moiety of glycollate oxidase (GO) was investigated in 11 species of higher plants from 7 families. A loose binding of FMN with GO was universally observed in all the plants. According to this character, a new efficient but mild method was established for preparation of FMN-free GO, which could produce 87.5% recovery of activity . FMN-free GO could be reactivated by adding FMN. For half reactivation 8×10 mol/L FMN was needed, and more than 5×10 mol/L for 100%. The result indicates that there exists a reversible dissociation balance between FMN and protein moiety of GO. Therefore, the concentration of FMN may act as a factor to regulate GO activity in higher plants. 相似文献
14.
15.
Penicillium camemberti AM83 strain is able to carry out effective Baeyer–Villiger type oxidation of DHEA, pregnenolone, androstenedione and progesterone to testololactone. Pregnenolone and DHEA underwent oxidation to testololactone via two routes: through 4-en-3-ketones (progesterone and/or androstenedione respectively) or through 3β-hydroxy-17a-oxa-d-homo-androst-5-en-17-one.Analysis of transformation progress of studied substrates as function of time indicates that the 17β-side chain cleavage and oxidation of 17-ketones to d-lactones are catalyzed by two different, substrate-induced, BVMOs. In the presence of a C-21 substrate (pregnenolone or progesterone) induction of the enzyme catalyzing cleavage at 17β-acetyl chain was observed, whereas DHEA and androstenedione induced activity of the BVMO responsible for the ring-D oxidation; 5-en-3β-alcohol was a more effective inducer that the respective 4-en-3-ketone. 相似文献
16.
A. Christy Hunter Kieran R. Watts Cinzia Dedi Howard T. Dodd 《The Journal of steroid biochemistry and molecular biology》2009,116(3-5):171-177
A series of steroids (progesterone, testosterone acetate, 17β-acetoxy-5α-androstan-3-one, testosterone and androst-4-en-3,17-dione) have been incubated with the thermophilic ascomycete Myceliophthora thermophila CBS 117.65. A wide range of biocatalytic activity was observed with modification at all four rings of the steroid nucleus and the C-17β side-chain.This is the first thermophilic fungus to demonstrate the side-chain cleavage of progesterone. A unique fungal transformation was observed following incubation of the saturated steroid 17β-acetoxy-5α-androstan-3-one resulting in 4-hydroxy-3,4-seco-pregn-20-one-3-oic acid which was the product generated following the opening of an A-homo steroid, presumably by lactonohydrolase activity. Hydroxylation predominated at axial protons of the steroids containing 3-one-4-ene ring-functionality. This organism also demonstrated reversible acetylation and oxidation of the 17β-alcohol of testosterone.All steroidal metabolites were isolated by column chromatography and were identified by 1H, 13C NMR, DEPT analysis and other spectroscopic data. The range of steroidal modification achieved with this fungus indicates that these organisms may be a rich source of novel steroid biocatalysis which deserve greater investigation in the future. 相似文献
17.
Tsehai A.J. Grell Benjamin N. Bell Chi Nguyen Daniel P. Dowling Nathan A. Bruender Vahe Bandarian Catherine L. Drennan 《Protein science : a publication of the Protein Society》2019,28(1):202-215
7‐Carboxy‐7‐deazaguanine synthase, QueE, catalyzes the radical mediated ring contraction of 6‐carboxy‐5,6,7,8‐tetrahydropterin, forming the characteristic pyrrolopyrimidine core of all 7‐deazaguanine natural products. QueE is a member of the S‐adenosyl‐L‐methionine (AdoMet) radical enzyme superfamily, which harnesses the reactivity of radical intermediates to perform challenging chemical reactions. Members of the AdoMet radical enzyme superfamily utilize a canonical binding motif, a CX3CX?C motif, to bind a [4Fe‐4S] cluster, and a partial (β/α)6 TIM barrel fold for the arrangement of AdoMet and substrates for catalysis. Although variations to both the cluster‐binding motif and the core fold have been observed, visualization of drastic variations in the structure of QueE from Burkholderia multivorans called into question whether a re‐haul of the defining characteristics of this superfamily was in order. Surprisingly, the structure of QueE from Bacillus subtilis revealed an architecture more reminiscent of the classical AdoMet radical enzyme. With these two QueE structures revealing varying degrees of alterations to the classical AdoMet fold, a new question arises: what is the purpose of these alterations? Here, we present the structure of a third QueE enzyme from Escherichia coli, which establishes the middle range of the spectrum of variation observed in these homologs. With these three homologs, we compare and contrast the structural architecture and make hypotheses about the role of these structural variations in binding and recognizing the biological reductant, flavodoxin. Broader impact statement: We know more about how enzymes are tailored for catalytic activity than about how enzymes are tailored to react with a physiological reductant. Here, we consider structural differences between three 7‐carboxy‐7‐deazaguanine synthases and how these differences may be related to the interaction between these enzymes and their biological reductant, flavodoxin. 相似文献
18.
Kirschner A Altenbuchner J Bornscheuer UT 《Applied microbiology and biotechnology》2007,73(5):1065-1072
A gene encoding a Baeyer–Villiger monooxygenase (BVMO) identified in Pseudomonas fluorescens DSM 50106 was cloned and functionally expressed in Escherichia coli JM109. Sodium dodecyl sulfate-polyacrylamide gel electrophoresis (SDS-PAGE) and Western blot analysis showed an estimated
56 kDa-size protein band corresponding to the recombinant enzyme. Expression in BL21 (DE3) resulted mainly in the formation
of inclusion bodies. This could be overcome by coexpression of molecular chaperones, especially the DnaK/DnaJ/GrpE complex,
leading to increased production of soluble BVMO enzyme in recombinant E. coli. Examination of the substrate spectra using whole-cell biocatalysis revealed a high specificity of the BVMO for aliphatic
open-chain ketones. Thus, octyl acetate, heptyl propionate, and hexyl butyrate were quantitatively formed from the corresponding
ketone substrates. Several other esters were obtained in conversion >68%. Selected esters were also produced on preparative
scale. 相似文献
19.
The Baeyer-Villiger monooxygenase (BVMO) BmoF1 from Pseudomonas fluorescens DSM 50106 was shown before to enantioselectively oxidize different 4-hydroxy-2-ketones to the corresponding hydroxyalkyl acetates, being the first example of a BVMO-catalyzed kinetic resolution of aliphatic acyclic ketones. However, the wild-type enzyme exhibited only moderate E values (E approximately 55). Thus, the enantioselectivity was enhanced by means of directed evolution and optimization of reaction conditions since it was found that higher E values (E approximately 70 for wild-type BmoF1) could already be obtained when performing biotransformations in shake flasks rather than small tubes. In a first step, random mutations were introduced by error-prone polymerase chain reaction, and BmoF1 mutants (>3,500 clones) were screened for improved activity and enantioselectivity using a microtiter-plate-based screening method. Mutations S136L and L252Q were found to increase conversion compared to wild type, while several mutations (H51L, F225Y, S305C, and E308V) were identified enhancing the enantioselectivity to a varying extent (E approximately 75-90). In a second step, beneficial mutations were recombined by consecutive cycles of QuikChange site-directed mutagenesis resulting in a double mutant (H51L/S136L) showing both improved conversion and enantioselectivity (E approximately 86). 相似文献
20.
Hilker I Baldwin C Alphand V Furstoss R Woodley J Wohlgemuth R 《Biotechnology and bioengineering》2006,93(6):1138-1144
Efficient whole cell biotransformations, in particular microbial whole cell Baeyer-Villiger oxidation with molecular oxygen, demand comprehension and optimization of the process details involved. Optimal provision of oxygen and control of bioprocess parameters are pivotal for their success. The interrelation of cell density and oxygen supply in an in situ substrate feeding and product removal (SFPR) whole cell Baeyer-Villiger oxidation process was investigated in detail. Both parameters were optimized with respect to practical considerations. The outcome of this study supports a schematic process model, allows estimation of optimum process conditions and exploration of its limits. 相似文献