Ecology of nematophagous fungi: Effect of the soil nutrients N,P and K,and seven major metals on distribution

The effects of the major soil nutrients and seven common metals on the distribution of nematophagous fungi were evaluated by comparing the concentration of the elements in soils with and without nematophagous fungi. Mineral nutrients, which were all positively correlated with nematode density, were the most important elements determining the presence of such fungi. Endoparasites producing adhesive conidia were independent of all the elements tested, while those species forming ingested conidia were isolated from soils high in nutrients, indicating a strong dependence on nematode density. Knob forming predators which rely on their ability to spontaneously produce traps to obtain nutrients were isolated from soils with low concentrations of mineral nutrients, while species with constricting rings were isolated from richer soils containing a greater density of nematodes. Net-forming species were largely independent of soil fertility, although generally they were isolated from soils with limited nutrientsd, especially K. Like other fungi, nematophagous fungi are generally not found in soils containing elevated concentrations of heavy metals. The results indicate that even concentrations of heavy metals which naturally occur in Irish soils can restrict the distribution of this fungal group. However the endoparasiteMeria coniospora is tolerant to all metals and to Cu in particular.     

A comparison of nematode-capturing efficiencies of fiveDactylella species at four temperatures

Conclusions The data and observations presented indicate that the factors controlling the nematode-capturing efficiency of predaceous fungi are complex. There seems to be little correlation between the ability to capture nematodes and the optimum growth rate of the capturing fungus, but there may be some relation between the motility of a nematode and the ease with which it may be captured. Since soil contains many fungi and nematodes competing for nutrients in fairly restricted spheres such as soil particles, bits of organic matter, or the rhizospheres of growing plants, the influence of a nematode-supporting fungus such asPenicillium digitatum on a predaceous fungus may be greater than the direct effect of some nematode upon the predaceous fungus or vice versa.     

Amendments fail to hasten biocrust recovery or soil stability at a disturbed dryland sandy site

In most drylands, biological soil crusts (biocrusts), an assemblage of lichens, bryophytes, fungi, green algae, and cyanobacteria, are critical to healthy ecosystem function. However, they are extremely sensitive to disturbance and attempts to facilitate their recovery have had variable success. In this study, we applied soil amendments designed to improve soil surface stability and accelerate biocrust recovery on an area disturbed by oil/gas exploration vehicles. Treatments included: (1) control (one time water only); (2) biocrust‐only: biocrust inoculum + nutrients in water; (3) polyacrylamide gels (which are known to stabilize soils) + biocrust inoculum + nutrients in water; (4) gypsum + biocrust inoculum + nutrients in water; and (5) saline (NaCl) solution + biocrust inoculum + nutrients in water. Only the NaCl treatment showed any effects on soil properties and these were only short term. These effects included an increase in soil strength and a reduction in soil aggregate stability, unsaturated hydraulic conductivity (K_h), and cyanobacterial biomass. The inoculated biocrust material failed to develop and even after 10 years, there was only a very low natural recolonization of the plots. These results show that inoculating soils or applying these levels of soil amendments does not guarantee recovery of soil stability or biocrust, and that some sites are unlikely to recover without assistance. Thus, there is a need for more research into ways to enhance soil stability and identify the factors limiting biocrust establishment.     

Diversity of nematode destroying fungi in Taita Taveta,Kenya

The diversity of nematode destroying fungi in Taita Taveta, Wundanyi division, Coast Province, Kenya, was investigated between May 2006 and December 2007 aiming at harnessing their potential in the biological control of plant parasitic nematodes in the area. Given that the intensity of land cultivation is continually increasing in the study area, it is prudent to document the status of the nematode destroying fungi before the remaining forest habitats are ultimately disrupted. Soil samples were collected from forest, maize/bean, napier grass, shrub and vegetable fields, which represented the main land use types in the study area. The soil sprinkle technique method was used to isolate the nematode destroying fungi from the soil. The fungi were identified to species level. Eighty-five isolates, distributed in eight genera and 14 taxa were identified as nematode destroying fungi. The species identified were Arthrobotrys dactyloides, Arthrobotrys oligospora, Arthrobotrys superba, Acrostalagamus obovatus, Dactyllela lobata, Harposporium aungulilae, Harposporium liltiputanum, Harposporium spp, Haptoglosa heterospora, Monacrosporium asterospernum, Monacrosporium cianopagum, Myzocytium, spp, Nematoctonus georgenious and Nematoctonus leptosporus. Vegetable land use had the highest diversity of nematode destroying fungi. The results show that the study area is rich in nematode destroying fungi with A. oligospora being widespread and a possible candidate for biological control of plant parasitic nematodes.     

The role of fungi in biogenic weathering in boreal forest soils

In this article we discuss the possible significance of biological processes, and of fungi in particular, in weathering of minerals. We consider biological activity to be a significant driver of mineral weathering in forest ecosystems. In these environments fungi play key roles in organic matter decomposition, uptake, transfer and cycling of organic and inorganic nutrients, biogenic mineral formation, as well as transformation and accumulation of metals. The ability of lichens, mutualistic symbioses between fungi and photobionts such as algae or cyanobacteria, to weather minerals is well documented. The role of mycorrhizal fungi forming symbioses with forest trees is less well understood, but the mineral horizons of boreal forests are intensively colonised by mycorrhizal mycelia which transfer protons and organic metabolites derived from plant photosynthates to mineral surfaces, resulting in mineral dissolution and mobilisation and redistribution of anionic nutrients and metal cations. The mycorrhizal mycelia, in turn provide efficient systems for the uptake and direct transport of mobilised essential nutrients to their host plants which are large sinks. Since almost all (99.99 %) non-suberised lateral plant roots involved in nutrient uptake are covered by ectomycorrhizal fungi, most of this exchange of metabolites must take place through the plant–fungus interface. This idea is still consistent with a linear relationship between soil mineral surface area and weathering rate since the mycelia that emanate from the tree roots will have a larger area of contact with minerals if the mineral surface area is higher. Although empirical models based on bulk soil solution chemistry may fit field data, we argue that biological processes make an important contribution to mineral weathering and that a more detailed mechanistic understanding of these must be developed in order to predict responses to environmental changes and anthropogenic impact.     

菌根真菌与植物共生营养交换机制研究进展

菌根是陆地生态系统普遍存在的、由土壤中的菌根真菌侵染宿主植物根系形成的联合共生体.菌根的建立是以共生体双方的营养交换为基础的:菌根真菌从土壤中吸收氮、磷等营养物质并转运给宿主植物,供其生长;作为交换,植物则以脂质或糖的形式向菌根真菌提供其生长所必需的碳水化合物.近年来,菌根真菌与宿主植物间的营养交换机制一直是研究的热点,国内外对菌根真菌介导的植物营养物质吸收和转运机制的研究也取得了巨大进展.本文综述了丛枝和外生两种菌根真菌与宿主植物间营养交换的最新研究进展,尤其是碳、氮、磷等几种重要营养物质的吸收与双向转运机制,以及营养交换在菌根形成中的潜在调控作用,并对目前存在的关键问题和未来研究方向进行了分析和展望,这对菌根模型的建立及菌根效益的优化具有重要意义.     

Microbial control of plant-parasitic nematodes: a five-party interaction

Plant-parasitic nematodes cause significant economic losses to a wide variety of crops. Chemical control is a widely used option for plant-parasitic nematode management. However, chemical nematicides are now being reappraised in respect of environmental hazard, high costs, limited availability in many developing countries or their diminished effectiveness following repeated applications. This review presents progress made in the field of microbial antagonists of plant-parasitic nematodes, including nematophagous fungi, endophytic fungi, actinomycetes and bacteria. A wide variety of microorganisms are capable of repelling, inhibiting or killing plant-parasitic nematodes, but the commercialisation of these microorganisms lags far behind their resource investigation. One limiting factor is their inconsistent performance in the field. No matter how well suited a nematode antagonist is to a target nematode in a laboratory test, rational management decision can be made only by analysing the interactions naturally occurring among “host plant–nematode target–soil–microbial control agent (MCA)–environment”. As we begin to develop a better understanding of the complex interactions, microbial control of nematodes will be more fine-tuned. Multidisciplinary collaboration and integration of biological control with other control methods will␣also contribute to more successful control practices.     

A review of isothiocyanates biofumigation activity on plant parasitic nematodes

Natural isothiocyanates (ITCs) are toxic to a range of soil-borne pest and pathogens, including nematodes and fungi, and can thus be used as natural fumigants called biofumigants. Glucosinolates, β-thioglucoside N-hydroxysulfates, are secondary metabolites of Brassicales plants, stored in the S-cells vacuoles. Upon plant tissue damage myrosinase (thioglucoside glycohydrolase, EC 3.2.3.1), stored in contiguous cells, hydrolyses glucosinalates to an unstable aglycone that eventually eliminates sulfate group producing a wide range of different volatile isothiocyanates that are extremely toxic to root-knot nematodes. In fact, among synthetic commercial nematicidal formulates we can find isothiocyanates as active ingredients. Conventional nematode control practices have included soil sterilants of great environmental impact, most of which are now banned making mandatory the development of eco-sustainable alternative tools. We reviewed the nematicidal activity of isothiocyanates as components of botanical matrixes in the frame of a holistic nematode control approach encompassing secondary beneficial effects on soil structure and microbiology, beneficial preservation, enhanced residual life of biological activity and plant growth.     

刀孢轮枝菌胞外几丁质酶的基因克隆及系统发育分析

食线虫真菌是植物寄生线虫的重要天敌,它们所产生的胞外水解酶(蛋白酶、几丁质酶和胶原蛋白酶等)能够降解线虫体壁和卵壳中的蛋白质及几丁质等结构成分并在侵染过程中发挥着重要的作用。本文中,我们发现刀孢轮枝菌Lecanicillium psalliotae对南方根结线虫Meloidogyne incognita卵具有较强的侵染能力。为了进一步研究刀孢轮枝菌胞外几丁质酶的性质,我们通过简并引物设计和DNA walking方法从刀孢轮枝菌的基因组中成功地克隆得到一个内切几丁质酶基因Lpchi1,该几丁质酶编码基因含有3个内含子,编码423个氨基酸。同源性和系统发育分析表明,不同生防真菌来源的几丁质酶具有较高的同源性并根据分子量的大小形成三个不同的进化分枝。     

刀孢轮枝菌胞外几丁质酶的基因克隆及系统发育分析

Nematophagous fungi, one of the natural enemies of nematodes, have been employed in biological control. Extracellular enzymes secreted from nematophagous fungi, including protease, chitinase and collagenase serve as virulence factors of infection. In this study, we found Lecanicillium psalliotae can penetrate the eggs of the root-knot nematode Meloidogyne incognita and influence development of the eggs. A chitinase gene Lpchi1 was isolated from L. psalliotae using degenerate primers and DNA-walking technique. Comparison of the chitinase amino acid sequences from different pathogenic fungi revealed that the enzymes were highly similar. The phylogenetic analysis demonstrated that the chitinases derived from different fungi were clustered into three main clades corresponding to different molecular weight.     

Resporulation of Metarhizium anisopliae granules on soil and mortality of Tenebrio molitor: Implications for wireworm management in sweetpotato

In Australia, sweetpotato (Ipomoea batatas L.) is vulnerable to root feeding insect pests such as wireworms (e.g., Agrypnus spp.). The number of registered insecticides to control these insect pests is limited and often pest pressure, for example by wireworms, is severe close to harvest, further limiting what insecticides can be applied. Incorporating biological control agents such as entomopathogenic fungi (e.g., Metarhizium anisopliae) into integrated pest management programmes may be feasible in sweetpotato. M. anisopliae has been shown to be effective in controlling more than 200 insects and it is able to reside and grow in the rhizosphere and rhizoplane, suggesting that M. anisopliae could be a promising candidate against soil insect pests. In the study presented here, M. anisopliae was formulated into calcium alginate granules fortified with nutrients. The resporulation of the fungal granules was tested on four different soil types in the laboratory. The biocontrol efficacy of the resulting fungal growth was also examined using larval mealworms, Tenebrio molitor as a model insect in the laboratory and the glasshouse. Our results indicated that sterilised soil favoured optimal fungal resporulation, although different soil types did not have a significant effect on fungal resporulation. The resulting fungal resporulation and growth on sterilised soil caused high mortality (up to 76%) of larval mealworms in the glasshouse, whereas the fungal granules applied to non-sterile soil demonstrated poor resporulation that led to low mortality (13%) of larval mealworms. The result of this study indicates that the manipulation of microbial populations in field soil is required to enhance the fungal growth and potential insect control against wireworms in the field.     

Quantification of the slug parasitic nematode Phasmarhabditis hermaphrodita from soil samples using real time qPCR

Phasmarhabditis hermaphrodita is a nematode parasite that infects and kills several species of slugs. The nematode is produced commercially as a biological control agent for slug pests of agriculture and horticulture. Given the difficulties of distinguishing this species from other nematode species in soil samples, very little is known about its natural ecology or its behaviour and persistence following application for biological control. Here we describe a method to quantify P. hermaphrodita in soil samples based on real time PCR. We designed primers and a dual labelled fluorescent probe that can be used to quantify numbers of P. hermaphrodita and which is capable of distinguishing this species from the morphologically identical Phasmarhabditis neopapillosa. We compared different methods whereby the entire nematode community is extracted prior to DNA extraction, and three methods to extract DNA directly from soil samples. Both nematode extraction and DNA extraction from large (10 g) samples of soil gave reliable estimates of nematode numbers, but methods which extracted DNA from small (1 g or less) soil samples substantially underestimated numbers. However, direct extraction of DNA from soils may overestimate numbers of live nematodes as DNA from dead nematodes was found to persist in soil for at least 6 days. The technique could be modified for detection and quantification of all soil borne parasitic nematodes.     

食真菌线虫与真菌的相互作用及其对土壤氮素矿化的影响

采用悉生培养微缩体系,探讨了食真菌线虫(燕麦真滑刃线虫)与两种真菌(真菌Ⅰ：外皮毛霉和真菌Ⅱ：丛梗孢科的一种)间的相互作用及其对土壤氮素矿化的影响．结果表明,燕麦真滑刃线虫在取食两种真菌时表现为在真菌Ⅱ上的生长优于真菌Ⅰ,两个处理的线虫数达到显著差异．食真菌线虫对真菌的取食活动促进了真菌的增殖：接种真菌Ⅱ加线虫处理中真菌Ⅱ的数量是仅接种真菌Ⅱ处理的2．5～3．5倍,增幅在整个培养期基本稳定;而接种真菌Ⅰ加线虫处理中真菌Ⅰ的数量在培养前期(10d)是仅接种真菌Ⅰ处理的1．1～2．0倍。之后增幅达5．0～5．7倍．线虫和真菌的生长及增殖基本保持同步．食真菌线虫与真菌的相互作用显著提高了土壤铵态氮和矿质态氮含量,促进了土壤氮的矿化,其中线虫与真菌Ⅰ的相互作用对提高矿质态氮含量的贡献显著大于线虫与真菌Ⅱ的相互作用。     

Effects of endophytic Fusarium oxysporum towards Radopholus similis activity in absence of banana

Four endophytic fungi (Fusarium spp.) isolated from the cortical tissue of surface-sterilised banana as well as from tomato roots were tested for their capacity of biological control towards the burrowing nematode Radopholus similis on banana. The pathogenic and parasitic capacities of endophytic fungi towards R. similis were tested in in vitro experiments. No parasitism of fungi on R. similis was observed. However, nematode activity decreased significantly in the presence of all endophytic fungi in vitro when compared to nematodes in the absence of fungi. The effects of fungi on R. similis activities in the soil were tested in the absence of plants. Nematode activities were reduced significantly by 16-30% by endophytic fungi when compared to untreated soil.     

Influence of ecological and edaphic factors on biodiversity of soil nematodes

Nematodes are the most diverse and highly significant group of soil-inhabiting microorganisms that play a vital role in organic material decomposition and nutrient recycling.Diverse geographical locations and environmental gradients show a significant impact on the diversity of nematodes. Present study aims to assess the effects of ecological (altitude, temperature, moisture) and edaphic (soil pH, nutrients, soil patches) factors on the soil nematode diversity and structure at five different landscape patches (forests, apple orchards, rice fields, pastures, and alpine zone) from ten different sites of Kashmir valley (India). Differences in the altitudinal gradients results in the shift of generic nematode population. Among the soil patches, highest nematode diversity was observed in forest soil and least in alpine soil; however, bacteriovorous nematodes dominated all the soil patches. The temperature and moisture have a significant effect on nematode diversity, the highest nematode trophic levels were observed above 21°C temperature, and 30% moisture. Nematode abundance decreased from alkaline to acidic pH of the soil. Soil nutrients such as, nitrogen (N) and phosphorus (P) have shown a detrimental effect in nematode richness at each site, where nematode diversity and richness of genera were higher at abundant soil N and P but decreased at low soil nutrients. Ecological indices like diversity index (DI), Shannon-Wiener Index (H'), enrichment index (EI), and maturity Index (MI) values demonstrated forest soil more favourable for nematodes and high soil health status than other soil patches. This study suggested that these indices may be helpful as soil monitoring tools and assessing ecosystem sustainability and biodiversity.     

Variation in Efficacy of Isolates of the Fungus ARF Against the Soybean Cyst Nematode Heterodera glycines

An unnamed fungus, designated ARF, that parasitizes eggs and sedentary stages of cyst nematodes is a potential biological control agent of Heterodera glycines. The objectives of this study were to determine whether ARF isolates differ in their ability to suppress nematode numbers in soil and to compare the efficacy of ARF in heat-treated and native soil. The effectiveness of 11 ARF isolates was compared by introducing homogenized mycelium into heat-treated soil. Soybean seedlings were transplanted into pots containing fungus-infested soil and inoculated with H. glycines. After 30 or 60 days, the number of nematodes and the percentage of parasitized eggs were determined. Three isolates (907, 908, and TN14), which were previously reported to be weak egg parasites in vitro, consistently suppressed nematode numbers by 50% to 100%. Of the isolates previously reported to be aggressive egg parasites, four (903, BG2, MS3, and TN12) reduced nematode numbers by 56% to 69% in at least one experimental trial, but the other four had no effect on nematode numbers. When the efficacy of isolate TN14 was tested in heat-treated and native soil, nematode suppression was greater in the heat-treated soil in only one of two trials. In both soil treatments, nematode numbers were reduced by more than 60%. We conclude that virulence toward nematode eggs in vitro is a poor indicator of effectiveness of an ARF isolate in soil, and that the presence of soil microbes may reduce, but does not completely inhibit, activity of isolate TN14.     

Nematophagous fungi of Toxocara canis eggs in a public park of La Plata, Argentina

Fungi have showed a great potential for the biological control of nematodes. However, they have not been evaluated for the control of animal and/or human parasites transmitted by egg contaminated soils. Environmental contamination with Toxocara spp. eggs is a public health problem. Accidental swallowing of Toxocara canis eggs (a nematode of dogs) usually results on a zoonotic infection (toxocarosis). The objectives of this research were: 1) To test the presence of antagonistic fungi against T. canis in the soil in public places of La Plata city, Argentina, infected with eggs of this parasite, 2) To determine the possible association between biotic and abiotic factors of the soil with the presence of fungal parasites of egg nematodes. Soil samples were tested for: textural type, organic matter (%), pH, presence of egg-parasite fungi, of larvae and of nematode eggs, in particular of Toxocara spp. The studied area showed the following characteristics: pH: 6.6-8.0, organic matter: 1.2-70%, with a predominantly loam texture. The following antagonistic fungal genera were identified: Acremonium, Aspergillus, Chrysosporium, Fusarium, Humicola, Mortierella, Paecilomyces and Penicillium. A prevalence of 70% was detected for nematode eggs, of 33% for Toxocara spp. eggs and of 90% for larvae. No association between the presence of egg-parasite fungi and the considered factors was found. More studies are necessary to know the natural antagonism factors to T. canis eggs for its in situ biological control.     

Assessing Cross-disciplinary Efficiency of Soil Amendments for Agro-biologically, Economically, and Ecologically Integrated Soil Health Management

Preventive and/or manipulative practices will be needed to maintain soil's biological, physiochemical, nutritional, and structural health in natural, managed, and disturbed ecosystems as a foundation for food security and global ecosystem sustainability. While there is a substantial body of interdisciplinary science on understanding function and structure of soil ecosystems, key gaps must be bridged in assessing integrated agro-biological, ecological, economical, and environmental efficiency of soil manipulation practices in time and space across ecosystems. This presentation discusses the application of a fertilizer use efficiency (FUE) model for assessing agronomic, economic, ecological, environmental, and nematode (pest) management efficiency of soil amendments. FUE is defined as increase in host productivity and/or decrease in plant-parasitic nematode population density in response to a given fertilizer treatment. Using the effects of nutrient amendment on Heterodera glycines population density and normalized difference vegetative index (indicator of physiological activities) of a soybean cultivar 'CX 252', how the FUE model recognizes variable responses and separates nutrient deficiency and toxicity from nematode parasitism as well as suitability of treatments designed to achieve desired biological and physiochemical soil health conditions is demonstrated. As part of bridging gaps between agricultural and ecological approaches to integrated understanding and management of soil health, modifications of the FUE model for analyzing the relationships amongst nematode community structure, soil parameters (eg. pH, nutrients, %OM), and plant response to soil amendment is discussed.     

Soil microorganisms control plant ectoparasitic nematodes in natural coastal foredunes

Belowground herbivores can exert important controls on the composition of natural plant communities. Until now, relatively few studies have investigated which factors may control the abundance of belowground herbivores. In Dutch coastal foredunes, the root-feeding nematode Tylenchorhynchus ventralis is capable of reducing the performance of the dominant grass Ammophila arenaria (Marram grass). However, field surveys show that populations of this nematode usually are controlled to nondamaging densities, but the control mechanism is unknown. In the present study, we first established that T. ventralis populations are top-down controlled by soil biota. Then, selective removal of soil fauna suggested that soil microorganisms play an important role in controlling T. ventralis. This result was confirmed by an experiment where selective inoculation of microarthropods, nematodes and microbes together with T. ventralis into sterilized dune soil resulted in nematode control when microbes were present. Adding nematodes had some effect, whereas microarthropods did not have a significant effect on T. ventralis. Our results have important implications for the appreciation of herbivore controls in natural soils. Soil food web models assume that herbivorous nematodes are controlled by predaceous invertebrates, whereas many biological control studies focus on managing nematode abundance by soil microorganisms. We propose that soil microorganisms play a more important role than do carnivorous soil invertebrates in the top-down control of herbivorous ectoparasitic nematodes in natural ecosystems. This is opposite to many studies on factors controlling root-feeding insects, which are supposed to be controlled by carnivorous invertebrates, parasitoids, or entomopathogenic nematodes. Our conclusion is that the ectoparasitic nematode T. ventralis is potentially able to limit productivity of the dune grass A. arenaria but that soil organisms, mostly microorganisms, usually prevent the development of growth-reducing population densities.     

Field Tests of Formulated Products Containing EitherVerticillium chlamydosporiumorArthrobotrys dactyloidesfor Biological Control of Root-knot Nematodes

Granular formulations containing eitherVerticillium chlamydosporiumorArthrobotrys dactyloideswere applied at 55–880 kg/ha in seven field trials on a range of soils in Queensland, Australia. Granules were incorporated into soil prior to planting tomatoes and the effectiveness of the formulated fungi in reducing damage caused by root-knot nematodes was compared to an untreated control and a granular formulation of fenamiphos. Formulations ofV. chlamydosporiumwere used in three experiments but the fungus did not increase egg parasitism or reduce galling or nematode numbers at harvest. Formulations containingA. dactyloideswere more effective, as galling was reduced 4–8 weeks after planting in four of five experiments. However, these effects generally disappeared later in the season, as significant reductions in galling were only observed in one of seven experiments at harvest. Fenamiphos generally reduced galling both at 4–8 weeks and at harvest. Yield increases due to fenamiphos or any of the biological treatments were not obtained in any experiment. The results suggested that formulations ofA. dactyloidesapplied at 220–440 kg/ha substantially reduced the number of nematodes present in roots 4–8 weeks after planting. Since tomato is relatively tolerant of nematode damage under the crop management systems used in northeastern Australia, such formulations could provide useful nematode control, particularly if used in conjunction with other control measures. However, formulations with greater biological activity will be needed if the level of nematode control obtained with chemical nematicides is to be achieved withA. dactyloides.