The role of disturbance in promoting the spread of the invasive seaweed Caulerpa racemosa in seagrass meadows

Human disturbances, such as anchoring and dredging, can cause physical removal of seagrass rhizomes and shoots, leading to the fragmentation of meadows. The introduced green alga, Caulerpa racemosa, is widely spread in the North-West Mediterranean and, although it can establish in both degraded and pristine environments, its ability to become a dominant component of macroalgal assemblages seems greater in the former. The aim of this study was to estimate whether the spread of C. racemosa depends on the intensity of disturbance to the canopy structure of Posidonia oceanica. A field experiment was started in July 2010 when habitat complexity of a P. oceanica meadow was manipulated to simulate mechanical disturbances of different intensity: rhizome damage (High disturbance intensity = H), leaf removal (Low disturbance intensity = L), and undisturbed (Control = C). Disturbance was applied within plots of different size (40 × 40 cm and 80 × 80 cm), both inside and at the edge of the P. oceanica meadow, according to an orthogonal multifactorial design. In November 2011 (16 months after the start of the experiment), no C. racemosa was found inside the seagrass meadow, while, at the edge, the cover of the seaweed was dependent on disturbance intensity, being greater where the rhizomes had been damaged (H) than in leaf removal (L) or undisturbed (C) plots. The results of this study indicate that physical disturbance at the margin of seagrass meadows can promote the spread of C. racemosa.     

Abundance of invasive peacock bass increases with water residence time of reservoirs in southeastern Brazil

Neotropical freshwater ecosystems are experiencing a great expansion in the number of invasive species, which is especially alarming since this region harbours 30% of the world’s fish biodiversity with high levels of endemism. We aimed to evaluate the main predictors of peacock basses (Cichla spp.) abundance outside their native range, which are the Amazon and Tocantins-Araguaia river basins. We used multivariate ordination techniques and multimodel inference to analyse peacock basses abundance in twelve reservoirs of the Paraíba do Sul river basin, southeastern Brazil. Interestingly, reservoirs at higher (southernmost) latitudes, located in more populated areas, had higher water temperature and lower turbidity, due to increased water residence time, and these three variables were also positively correlated with abundance of this warm-water invasive fish. Habitat structure was less important in explaining peacock basses abundance, which was not significantly related to biotic factors (fish species richness and time since peacock basses introduction). We hypothesize that the observed effects of reservoir management on limnological features and peacock bass abundance, particularly water residence time (as a mediator of temperature and turbidity), may apply to other Neotropical basins and could influence the impact of this invader.     

Phylogeography of the common pandora Pagellus erythrinus in the central Mediterranean Sea: sympatric mitochondrial lineages and genetic homogeneity

The distribution of the genetic diversity and the population structure of Pagellus erythrinus were analysed using mitochondrial control region sequences and cytochrome b restriction profiles in a total of 128 and 508 individuals, respectively, that were collected from 15 sampling sites in the central Mediterranean Sea and from one site in the Atlantic Ocean. No population genetic structure was detected within the central Mediterranean and thus, the commonly recognized transition zones in the area do not seem to affect population connectivity. The comparison between the Mediterranean samples and the single Atlantic sample suggests weak differentiation between the two basins. Three mitochondrial lineages were identified, each including individuals from almost every sampling site. The haplotype and nucleotide diversity values, mismatch distribution and demographic parameters indicate that the sympatry of these lineages can be ascribed to a period of isolation followed by genetic divergence, population expansion and secondary contact, all of which are likely to be associated with climatic oscillations that occurred during the middle and late Pleistocene.     

Composition and dynamics of the gill microbiota of an invasive Indo-Pacific oyster in the eastern Mediterranean Sea

Gill bacterial communities of Chama pacifica, an Indo-Pacific invasive oyster to the eastern Mediterranean Sea, were compared with those of Chama savignyi, its northern Red Sea congeneric species. Summer and winter bacterial populations were characterized and compared using 16S rDNA clone libraries, and seasonal population dynamics were monitored by automated ribosomal intergenic spacer analysis (ARISA). Clone libraries revealed a specific clade of bacteria, closely related to marine endosymbionts from the Indo-Pacific, found in both ecosystems, of which one taxon was conserved in oysters from both sites. This taxon was dominant in summer libraries and was weakly present in winter ones, where other members of this group were dominant. ARISA results revealed significant seasonal variation in bacterial populations of Mediterranean Sea oysters, as opposed to Red Sea ones that were stable throughout the year. We suggest that this conserved association between bacteria and oyster reflects either a symbiosis between the oyster host and some of its bacteria, a co-invasion of both parties, or both.     

Niche differentiation among mat-forming, sulfide-oxidizing bacteria at cold seeps of the Nile Deep Sea Fan (Eastern Mediterranean Sea)

Sulfidic muds of cold seeps on the Nile Deep Sea Fan (NDSF) are populated by different types of mat-forming sulfide-oxidizing bacteria. The predominant sulfide oxidizers of three different mats were identified by microscopic and phylogenetic analyses as (i) Arcobacter species producing cotton-ball-like sulfur precipitates, (ii) large filamentous sulfur bacteria including Beggiatoa species, and (iii) single, spherical Thiomargarita species. High resolution in situ microprofiles revealed different geochemical settings selecting for the different mat types. Arcobacter mats occurred where oxygen and sulfide overlapped above the seafloor in the bottom water interface. Filamentous sulfide oxidizers were associated with steep gradients of oxygen and sulfide in the sediment. A dense population of Thiomargarita was favored by temporarily changing supplies of oxygen and sulfide in the bottom water. These results indicate that the decisive factors in selecting for different mat-forming bacteria within one deep-sea province are spatial or temporal variations in energy supply. Furthermore, the occurrence of Arcobacter spp.-related 16S rRNA genes in the sediments below all three types of mats, as well as on top of brine lakes of the NDSF, indicates that this group of sulfide oxidizers can switch between different life modes depending on the geobiochemical habitat setting.     

Rainfall facilitates the spread, and time alters the impact, of the invasive Argentine ant

Climate change may exacerbate invasions by making conditions more favorable to introduced species relative to native species. Here we used data obtained during a long-term biannual survey of the distribution of ant species in a 481-ha preserve in northern California to assess the influence of interannual variation in rainfall on the spread of invasive Argentine ants, Linepithema humile, and the displacement of native ant species. Since the survey began in 1993, Argentine ants have expanded their range into 74 new hectares. Many invaded hectares were later abandoned, so the range of Argentine ants increased in some years and decreased in others. Rainfall predicted both range expansion and interannual changes in the distribution of Argentine ants: high rainfall, particularly in summer months, promoted their spread in the summer. This suggests that an increase in rainfall will promote a wider distribution of Argentine ants and increase their spread into new areas in California. Surprisingly, the distribution of two native ant species also increased following high rainfall, but only in areas of the preserve that were invaded by L. humile. Rainfall did not have a negative impact on total native ant species richness in invaded areas. Instead, native ant species richness in invaded areas increased significantly over the 13 years of observation. This suggests that the impact of Argentine ants on naïve ant communities may be most severe early in the invasion process.     

Niche dynamics in space and time

Niche conservatism, the tendency of a species niche to remain unchanged over time, is often assumed when discussing, explaining or predicting biogeographical patterns. Unfortunately, there has been no basis for predicting niche dynamics over relevant timescales, from tens to a few hundreds of years. The recent application of species distribution models (SDMs) and phylogenetic methods to analysis of niche characteristics has provided insight to niche dynamics. Niche shifts and conservatism have both occurred within the last 100 years, with recent speciation events, and deep within clades of species. There is increasing evidence that coordinated application of these methods can help to identify species which likely fulfill one key assumption in the predictive application of SDMs: an unchanging niche. This will improve confidence in SDM-based predictions of the impacts of climate change and species invasions on species distributions and biodiversity.     

Heterogeneity in the nutrient limitation of different bacterioplankton groups in the Eastern Mediterranean Sea

The heterotrophic bacterial community of the Eastern Mediterranean Sea is believed to be limited by phosphorus (P) availability. This observation assumes that all bacterial groups are equally limited, something that has not been hitherto examined. To test this hypothesis, we performed nutrient addition experiments and investigated the response of probe-identified groups using microautoradiography combined with catalyzed reporter deposition fluorescence in situ hybridization. Our results show contrasting responses between the bacterial groups, with Gammaproteobacteria being the group more affected by P availability. The Roseobacter clade was likely colimited by P and nitrogen (N), whereas Bacteroidetes by P, N and organic carbon (C). In contrast, SAR11 cells were active regardless of the nutrient concentration. These results indicate that there is high heterogeneity in the nutrient limitation of the different components of the bacterioplankton community.     

Anthropogenic disturbance of coastal habitats promotes the spread of the introduced scleractinian coral Oculina patagonica in the Mediterranean Sea

The extensive human-mediated modifications of shallow coastal habitats drastically alter selection regimes and may assist alien invasions. The preferential presence of a non-indigenous scleractinian coral (Oculina patagonica) on anthropogenic hard substrata was investigated in a highly disturbed coastal area, along the eastern Saronikos Gulf (Aegean Sea, Eastern Mediterranean). Although the species occurred on both natural and anthropogenic substrata at similar frequencies, its abundance was substantially higher on the latter. The species was present all along the shallow (0.5–5 m) infralittoral zone of the studied coastline, and its percent cover even exceeded 50 % at a site of anthropogenic hard substratum. The occupancy of the species declined with distance from a highly disturbed industrialized/urbanized area (Athens metropolitan coastal front and the port of Piraeus). Space availability as a result of habitat modification appears to have been an important factor enhancing the coral’s abundance in this area. The ongoing degradation of the coastal zone, as a combined effect of coastal pollution, proliferation of artificial substrata and overgrazing seems to be paving the way to this new invasion in the Aegean Sea.     

Niche partitioning of the genetic lineages of the oak powdery mildew complex

Recent molecular studies have shown that four genetic lineages, probably cryptic species, cause oak powdery mildew in Europe. We tested the hypothesis of niche differentiation between the two most frequent species (Erysiphe alphitoides and Erysiphe quercicola), by determining their relative prevalences at various times during the growing season. E. quercicola was strictly associated with the flag-shoot symptom in a 2-yr sampling campaign of 35 natural oak seedling populations. Additional sampling during Aug.–Sep. in the same stands showed that E. alphitoides predominated in most (70 %) cases. Time-course monitoring of powdery mildew in two natural regenerating oak populations confirmed the inverse patterns of relative abundance for these two species in early and late season. The coexistence of these two closely related species may be due to the use of different strategies, resulting from a trade-off between overwintering (flag-shoots vs. chasmothecia) and late-season performance.     

On the spread of information with time and distance

The transmission of some information or behavior pattern is treated as a flow of “particles” which execute random motions over a population of individuals and which may multiply or disappear. Equations are derived for the number density of these “particles” and from this is calculated the number of individuals through which the “particles” have passed. The results are applied to a number of situations such as 1) uniform spatial distribution with multiplication factor decreasing with time because of loss of interest or confusion of the information, 2) multiplication factor constant but the rate of spreal decreasing with multiple hearings, 3) one-dimensional region with a small starting region with or without an absorbing barrier 4) two-dimensional region with absorbing barrier, 5) continous sources of information within a small region in one dimension, 6) uniform spatial distribution in which individuals do not respond to more than one hearing.     

Niche conservatism and the differences in species richness at the transition of tropical and subtropical climates in South America

Although detected long ago, latitudinal disparity in species richness lacks a consensus regarding its underlying mechanisms. We evaluated whether the main predictions derived from the tropical niche conservatism hypothesis help to explain differences regarding species richness and turnover of species and lineages between forests located in tropical and subtropical climates. If tropical niches are retained, we predict that only a subset of tropical lineages disperses and establishes outside the tropics; tip‐level phylogenetic clustering increases outside the tropics; and the climatic variation drives species richness indirectly via constraints to the distribution of lineages. We compiled 58 checklists along tropical and subtropical sites of riparian forests in southeastern South America. We tested the frequency of niches shifts for species and lineages and the abundance of taxa in each climate. Next, we checked the likelihood of pathways linking climatic and spatial predictors directly with species richness and via phylogenetic clustering estimates. Several lineages only occurred in the tropics, and the number of species and lineages that occurred in both climates was lower than expected by chance. Conversely, few lineages were exclusively subtropical and diversified in the subtropics. Phylogenetic clustering increased in subtropical sites and was correlated with decreasing species richness. An interaction between mean temperature of coldest quarter and precipitation seasonality explained most variation in species richness via increases in phylogenetic clustering. These results support an important contribution of climatic niche conservatism to explain richness disparities between tropics and subtropics, mainly because of the inability of most lineages to colonize the subtropics, which is very likely related to cold intolerance. Since niche conservatism likely drives most of the variation in tree species richness in the region, it provides a mechanistic interpretation of the observed patterns, thus fostering the understanding of richness disparities between these tropical and subtropical tree communities.     

Hydromedusae of the Mediterranean Sea

Mediterranean hydromedusae can be classified in several categories: common species, widely distributed throughout the Mediterranean and rare species reported from the Pacific, Indian or Atlantic Oceans; seasonal species comprising cold-season species with a boreal affinity and warm-season species with a hot to temperate affinity; neritic and mid-ocean species; surface species and meso-, infra-, and bathypelagic species. Holoplanktonic species are known to be associated with stable hydrological conditions (offshore waters, deep waters, summer and winter homothermy), whereas meroplanktonic species are more likely to be found in more disturbed hydrological conditions (coastal waters, surface waters, spring and autumn periods of temperature fluctuation). A general pattern of medusa distribution is established based upon comparative study throughout the Mediterranean.     

Development of novel microsatellite markers to identify the different invasive lineages in the Corbicula complex and to assess androgenesis

Reliable markers are needed to identify the lineages in the invasive clam genus Corbicula. Previous studies have demonstrated that mitochondrial (mt) DNA poorly resolves Corbicula phylogeny, owing to its androgenetic reproductive mode. Moreover, hybridization and mitochondrial/nuclear mismatches occur. We developed the first eleven polymorphic markers to detect these phenomena and to investigate the nuclear identity of Corbicula populations. These microsatellite loci revealed three main lineages in Western Europe. One locus allowed rapid discrimination of these three lineages on agarose gel, saving time and money. Moreover, the eleven markers were successfully cross-amplified in the invasive Corbicula lineages found in North America.     

Plastic Accumulation in the Mediterranean Sea

Concentrations of floating plastic were measured throughout the Mediterranean Sea to assess whether this basin can be regarded as a great accumulation region of plastic debris. We found that the average density of plastic (1 item per 4 m²), as well as its frequency of occurrence (100% of the sites sampled), are comparable to the accumulation zones described for the five subtropical ocean gyres. Plastic debris in the Mediterranean surface waters was dominated by millimeter-sized fragments, but showed a higher proportion of large plastic objects than that present in oceanic gyres, reflecting the closer connection with pollution sources. The accumulation of floating plastic in the Mediterranean Sea (between 1,000 and 3,000 tons) is likely related to the high human pressure together with the hydrodynamics of this semi-enclosed basin, with outflow mainly occurring through a deep water layer. Given the biological richness and concentration of economic activities in the Mediterranean Sea, the affects of plastic pollution on marine and human life are expected to be particularly frequent in this plastic accumulation region.