武夷山自然保护区土壤可培养芽胞杆菌 的物种多样性及分布

为了解武夷山自然保护区土壤中可培养芽胞杆菌的分布状况, 2012年6月从该保护区的黄岗山顶部、中部、底部和桐木关、挂墩、大竹岚等6个地点采集土样75份。用80℃水浴加热、稀释平板法进行芽胞杆菌的分离, 并根据16S rRNA基因序列分析对菌株进行初步鉴定。从土样中分离出芽胞杆菌418株, 鉴定为8个属42个种, 其中Bacillus属的种数最多, 有20种, Paenibacillus属和Lysinibacillus属分别有8种和7种。不同地点分离到的芽胞杆菌在种类、数量上存在差异: 从大竹岚土壤中分离到的芽胞杆菌种类最多, 从黄岗山中部和底部分离到的种类数则较少; 挂墩、大竹岚土壤中芽胞杆菌的数量较大, 达3.6×10⁶ cfu/g以上, 而黄岗山顶部和中部土壤中的数量则少于4.9×10⁵ cfu/g。Bacillus cereus、B. mycoides、B. thuringiensis和Lysinibacillus xylanilyticus等4个种在6个地点的土样中均有分离到, 其中B. thuringiensis、L. xylanilyticus是该保护区土壤中的优势种。桐木关土壤中芽胞杆菌的种类多样性和均匀度指数都比其他5个地点的高, 而挂墩土壤中芽胞杆菌的Shannon-Wiener多样性、均匀度和优势度指数都最低。B. mycoides和B. thuringiensis的数量与海拔显著相关, 相关系数分别为0.852和-0.834, B. cereus、B. mycoides、B. thuringiensis的分离频度与海拔的相关性极显著, 相关系数分别为0.960、0.952和-0.931。研究结果表明, 武夷山自然保护区土壤中可培养芽胞杆菌的种类丰富、数量较大, 具有较高的多样性。     

Characteristics of apolipophorin-III of the southwestern corn borer, Diatraea grandiosella

Apolipophorin-III was isolated from the lipophorin-free fraction of larval plasma of the southwestern corn borer, Diatraea grandiosella, because significant amounts of apolipophorin-III were found to be present in the hemolymph not associated with lipophorin. Apolipophorin-III, purified using ammonium sulfate precipitation, cation exchange chromatography, and gel filtration, was shown to be a nonglycosylated polypeptide with 17 kDa mol. wt, as determined by SDS-PAGE and silver staining. The amino acid composition of apolipophorin-III showed similarities to published compositions of apolipophorin-III isolated from other insects. The N-terminal sequence of apolipophorin-III (DAPSTTPPQDXEKKAAEFQKTFTEQXNQLANK), is highly homologous to that of apolipophorin-III of Manduca sexta. Antiserum raised against purified apolipophorin-III was used to demonstrate an immunochemical identity between the isolated apolipophorin-III and that associated with lipophorin. This antiserum cross-reacted with apolipophorin-III of M. sexta, and antiserum raised against M. sexta apolipophorin-III cross-reacted with apolipophorin-III isolated from D. grandiosella, demonstrating an immunochemical relationship between the proteins, and providing confirmatory evidence for the identity of the isolated protein. These antisera did not react with the putative apolipophorin-III of the cricket, Acheta domesticus. Using immunoprecipitation by the apolipophorin-III antiserum of D. grandiosella, the synthesis and secretion of [³H]apolipophorin-III by the fat body in vitro was shown to be maximal in 13–15 day-old larvae, with a transit time of ca 23 min.     

南方红豆杉内生真菌的抗肿瘤产物震颤毒素的研究

从红豆杉内生真菌青霉菌Penicillum sp. H⑥.1发酵产物中自然析出一种化合物,经图谱检测和文献比对,鉴定为震颤毒素Penitrem A。四唑盐（MTT）比色法研究表明Penitrem A对恶性黑色素瘤细胞A375有一定的抑制作用,且抑制作用随浓度的增大而增强,IC₅₀为27.24μg/mL。本研究是首次从红豆杉内生真菌发酵产物中分离得到震颤毒素Penitrem A,为抗肿瘤药物开发提供了理论参考。     

There are at least three genetically distinct small piroplasms from dogs

The 18S nuclear subunit ribosomal RNA (18S rRNA) gene of small piroplasms isolated from dogs from Okinawa (Japan), Oklahoma, North Carolina, Indiana, Missouri, and Alabama, was isolated and sequenced. Phylogenetic analysis of these sequences and comparisons with sequences from other Babesia, Cytauxzoon, and Theileria species revealed that all canine small babesial isolates, with the exception of isolates from California and Spain, were placed in a group containing the Babesia spp. sensu stricto. Within the Babesia spp. sensu stricto, there was support for separating the small canine piroplasms from the large canine piroplasm, Babesia canis. The isolate from California was in a distinct phylogenetic clade, closely related to babesial isolates from wildlife and humans from the Western US. The canine isolate from Spain was closely related to Babesia microti. These results suggest that there are multiple small piroplasm species in dogs. The isolates from the Midwestern and Eastern US and the one from Japan probably represent a single species with wide geographic distribution.     

山田胶锈菌和亚洲胶锈菌吸器提取体系建立

利用锈菌吸器特异性结合伴刀豆球蛋白Concanavalin A（ConA）的特性,用ConA-sepharose 4b作为层析介质,对自然状态下感染山田胶锈菌Gymnosporangium yamadae的绚丽海棠叶片以及接种亚洲胶锈菌G. asiaticum后不同发病时期沙梨叶片中胶锈菌的吸器进行分离,构建了吸器提取体系。结果表明,在感病叶片产生大量花斑时提取到这两种胶锈菌的完整吸器,经光学显微镜与透射电子显微镜观察,发现这两种胶锈菌的吸器形态相似,呈菌丝状或肾形或不规则形状,吸器体与叶绿体含量接近1:1。研究中提取得到了G. yamadae吸器总RNA,为胶锈菌的吸器转录组中候选效应分子筛选以及病原与寄主互作分子机制研究奠定了重要基础。     

深圳大鹏湾六种珊瑚共附生真菌多样性研究

本研究使用6种不同培养基对深圳大鹏湾6种珊瑚上的共附生真菌进行平板涂布法分离培养,结合ITS-rDNA基因序列特征和形态学特征进行鉴定来研究深圳大鹏湾海域珊瑚共附生真菌的多样性。共分离培养出457株真菌菌株,分属于7个属,分别为红酵母属Rhodotorula（180株）、曲霉属Aspergillus（170株）、木霉属Trichoderma（50株）、青霉属Penicillium（34株）、枝孢属Cladosporium（21株）、透孢黑团壳属Massarina（1株）和弯颈霉属Tolypocladium（1株）,其中优势属为红酵母属Rhodotorula和曲霉属Aspergillus,占菌株分离总数的76.59%。单独鹿角珊瑚上分离到的共附生真菌数量和种类最多,为160株9种;在该种珊瑚上还分离出弯颈霉属Tolypocladium sp.,该属真菌此前从未在珊瑚共附生真菌的研究中分离出来。本研究还发现SDA培养基分离出的共附生真菌数量最多,CDA培养基的真菌数量最少,表明不同培养基分离的共附生真菌多样性存在差异。     

Isolation and identification of yeasts associated with vineyard and winery by RFLP analysis of ribosomal genes and mitochondrial DNA

Yeast colonies isolated from vineyard and cellar substrates were analysed in the present study. Yeast species assessment was carried out by amplification and digestion of a region of the ribosomal RNA gene repeat unit. Saccharomyces strains were also characterised using mitochondrial DNA restriction analysis. Oxidative basidiomycetous yeasts without enological potential were predominant in the vineyard environment. Yeasts associated with grape skin depend on grape variety, vintage and degree of grape maturation. These species from grape surface constituted the predominant microbiota in must and they developed during the first stages of the process. Yeasts colonies were also isolated and identified from the walls of a fermentation vat some days before the harvest. Contrary to what was expected, Saccharomyces cerevisiae was not the major species isolated as Candida sorbosa represented 76% of the species isolated. Saccharomyces strains isolated from the fermentation vat had been previously isolated in wine fermentations in this cellar. Therefore, these strains should be considered as constant residents of this winery.     

Phylogeny of trichostome ciliates (Ciliophora, Litostomatea) endosymbiotic in the Yakut horse (Equus caballus)

Ciliates of the subclass Trichostomatia inhabit the fermentative regions of the digestive tract of herbivores. Most available small subunit ribosomal RNA (SSrRNA) gene sequences of trichostomes are from species isolated from the rumen of cattle or sheep and from marsupials. No ciliate species endosymbiotic in horses has yet been analyzed. We have sequenced the SSrRNA genes of five ciliate species, isolated from the cecum and colon of four Yakut horses: Cycloposthium edentatum, Cycloposthium ishikawai, Tripalmaria dogieli, Cochliatoxum periachtum, and Paraisotricha colpoidea.

Based on their morphology, Cycloposthium, Tripalmaria, and Cochliatoxum are classified as Entodiniomorphida, while Paraisotricha is considered a member of the Vestibuliferida. Phylogenetic analyses using Bayesian inference, distance, and parsimony methods confirm these placements. The two Cycloposthium species cluster together with the published Cycloposthium species isolated from a wallaby in Australia. Tripalmaria and Cochliatoxum branch as a sister group to or basal within the Entodiniomorphida. The Vestibuliferida remain paraphyletic with Paraisotricha and Balantidium branching basal to all other trichostome species, but not closely related to Isotricha and Dasytricha.     

Autodissemination of Beauveria bassiana by Sap Beetles (Coleoptera: Nitidulidae) to Overwintering Sites

An autoinoculative device was used to test the ability of sap beetles (Coleoptera: Nitidulidae) to carry a specific strain of Beauveria bassiana (Balsamo) Vuillemin to overwintering sites in a multiyear field study. The device was baited with the pheromone and coattractants for the dusky sap beetle (Carpophilus lugubris Murray) and placed in the field in the fall of each year. The introduced strain occurred at high frequency among the B. bassiana isolated in the fall of all four years tested (100% of all isolates from 21 of 22 collection dates). The introduced strain of B. bassiana was isolated at high frequency from all the B. bassiana-contaminated sap beetles recovered from the overwintering traps (100% of all isolates from 13 of 23 trap/beetle species combinations) and was highest after the longest fall exposure. The introduced strain was primarily isolated from C. lugubris and C. antiquus, but species distribution was also dependent on the overwintering trap design used. Few non-sap beetles species of insects were recovered from the artificial overwintering sites. Although B. bassiana was isolated from free flying sap beetles caught in traps in the spring of each year, none were infected with the introduced strain. The autoinoculating device provides selective contamination of sap beetles in overwintering sites when used in the fall. It may be useful in providing some control of sap beetles or other insects where limited numbers of mass overwintering sites (such as tree holes) occur.     

安徽黄山红豆杉内生真菌多样性与生态分布

为了了解红豆杉Taxus chinensis内生真菌的种类及分布特点,通过采样,分离,培养与鉴定,对安徽黄山红豆杉内生真菌的群落结构及生态分布进行了研究.结果共分离出14属107株内生真菌,其中青霉属Penicillium,曲霉属Aspergillus,交链孢属Alternaria和拟青霉属Paecilomyces为优势种群.同时内生真菌的多样性具有组织专一性,以根和皮中分布较多,分别是分离菌株总数的37.38%和26.17%.     

烟草内生真菌多样性和种群结构

从云南“世界烟草品种园”10种烟草的根、茎、叶中分离得到199株内生真菌,根据rDNA-ITS系统发育分析鉴定为17属25种,其中格孢腔菌目Pleosporales内生真菌的种类和数量最多;茎点霉属Phoma、链格孢属Alternaria和镰孢菌属Fusarium为主要优势属,相对频率分别为25.1%、24.6%和11.6%,优势度Y值分别为0.251、0.172和0.104。烟草不同组织内生真菌的种群结构存在显著差异,分离自根的内生真菌的主要优势属为Fusarium和Phoma,Y值分别为0.235和0.123;分离自茎的内生真菌的主要优势属为Phoma和Alternaria,Y值分别为0.186和0.155;分离自叶片的内生真菌的主要优势属为Alternaria,Y值为0.286。Phoma从烟草根茎叶中均可分离得到,而Alternaria只分布在地上部茎叶中,Fusarium只分布在根茎中,表明这3个优势属真菌对根茎叶组织的专化性不同。     

Genotyping of Staphylococcus aureus isolated from humans, bovine subclinical mastitis and food samples in Argentina

The aim of the present study was to characterize genotypically 45 Staphylococcus aureus strains isolated from humans, bovine subclinical mastitis and food samples in Argentina by rep-PCR and PCR amplification of virulence genes. Resistances to various antibiotics could be observed for the human S. aureus, less pronounced for the bovine strains, but not for the eight S. aureus isolated from food samples. The strains could be classified genotypically by rep-PCR and by amplification of the genes encoding protein A, coagulase, clumping factor, the collagen adhesin domains A and B, capsular polysaccharide 5 and 8, the accessory gene regulator agr classes I to III, and the S. aureus gene regulator sae. rep-PCR analyses and the different gene patterns revealed that the strains could be divided into seven groups mostly matching with the origin of the isolates. The present study describes genotypic variations of S. aureus strains isolated from different origins in Argentina. The study provides a valuable insight into molecular specificities of this important pathogen.     

Antibacterial activity from Penicillium corylophilum Dierckx

A strain of Penicillium corylophilum isolated from Brazilian soil sample was submitted to different culture conditions to investigate the production of secondary metabolites with antimicrobial activity. The largest number of conidia was obtained after 5 days of incubation in oat medium and the highest level of antimicrobial activity was produced when the fungus culture was developed in the Czapek medium. The activity against Staphylococcus aureus was found only in the chloroform extract from Czapek culture broth, which also showed activity against Micrococcus luteus. Fumiquinozoline F was isolated from the active chloroform extract by using chromatographic methods. The minimal inhibitory concentration (MIC) values for M. luteus and S. aureus were 99 μg/mL and 137 μg/mL, respectively.     

Thylakoid polypeptide composition and light-independent phosphorylation of the chlorophyll a,b-protein in Prochloron, a prokaryote exhibiting oxygenic photosynthesis

Thylakoids of the prokaryote Prochloron, present as a symbiont in ascidians isolated from the Red Sea at Eilat (Israel), showed polypeptide electrophoretic patterns comparable to those of thylakoids from eukaryotic oxygen-evolving organisms. Low temperature, fluorescence spectroscopy of Prochloron, having a chlorophyll a/b ratio of 3.8–5, and frozen in situ, demonstrated the presence of Photosystem II chlorophyll-protein complex emitting at 686 and 696 nm, as well as the emission band of Photosystem I at 720 nm which was so far not observed in Prochloron species. The latter emission was absent, if the cells or thylakoids were isolated prior to freezing. Energy transfer from chlorophyll b to chlorophyll a could be demonstrated to occur in vivo. The chlorophyll a,b-protein complex of Photosystem II, isolated by non-denaturing polyacrylamide gel electrophoresis, contained one major polypeptide of 34 kDa. The polypeptide was phosphorylated in vitro by a membrane-bound protein kinase which was not stimulated by light. A light-independent protein kinase activity was also found in isolated thylakoids of another prokaryote, the cyanophyte Fremyella diplosiphon. State I–State II transition could not be demonstrated in Prochloron by measurements of modulated fluorescence intensity in situ. We suggest that the presence of a light-independent thylakoid protein kinase of Prochloron, collected in the Red Sea at not less than 30 m depth, might be the result of an evolutionary process whereby this organism has adapted to an environment in which light, absorbed preferentially by Photosystem II, prevails.     

西双版纳5种附生兰非菌根内生真菌多样性研究

从西双版纳纳板河流域国家级自然保护区的盆距兰Gastrochilus、隔距兰Cleisostoma、毛兰Eria、贝母兰Coelogyne和万代兰Vanda的根、茎、叶分离得到172株非菌根内生真菌,根据ITS1-5.8S-ITS2 rDNA系统发育分析鉴定为盘菌亚门的4纲11目29属,其中炭角菌目、肉座菌目和格孢腔菌目真菌的相对频率最高;Xylaria、Fusarium和Phoma为主要优势属,相对频率分别为23.3%、14.5%和10.5%,它们的组织专化性不同,其中Xylaria在根、茎和叶均有分布,而Fusarium和Phoma都分离自根部。不同组织的内生真菌多样性和种类组成差异明显,根、茎和叶的内生真菌Shannon多样性指数分别为2.4083、1.0312和0.6557,表明根部内生真菌多样性显著高于茎、叶内生真菌多样性,其中根的主要优势内生真菌类群有Fusarium、Xylaria和Phoma,茎的主要优势内生真菌类群有Xylaria、Pestalotiopsis和Colletotrichum,叶的主要优势内生真菌类群有Colletotrichum、Pallidocercospora、Pantospora和Phyllosticta。从附生兰种类来看,盆距兰、隔距兰、毛兰、贝母兰和万代兰内生真菌的Shannon多样性指数分别为2.2689、2.2635、2.0115、1.9197、1.7139,表明盆距兰和隔距兰内生真菌多样性高于毛兰、贝母兰和万代兰。     

Habenariol, a freshwater feeding deterrent from the aquatic orchid Habenaria repens (Orchidaceae)

An uncommon ester, bis-p-hydroxybenzyl-2-isobutylmalate, habenariol, has been isolated, by bioassay-guided fractionation, from the organic extract of the freshwater orchid Habenaria repens. The structure of habenariol was determined by the interpretation of spectral data. Feeding bioassays showed that habenariol deters feeding by the common freshwater crayfish Procambarus clarkii. Habenariol is related to a bis-ester glycoside isolated from the non-aquatic orchid Galeola faberi.     

Diagnosis of the primary amoebic meningoencephalitis due to Naegleria fowleri

Trophozoites of the free-living amoeba, Naegleria fowleri, were isolated from the cerebrospinal fluid of meningoencephalitis patient. The infecting agent was identified as N. fowleri based on morphologic, serologic and molecular techniques carried out on the isolated organisms.     

Effect of some leaf essential oil phenotypes in coastal redwood on the growth of several fungi with endophytic stages

Experiments assessed the effect of four foliar essential oil phenotypes from a coastal redwood (Sequoia sempervirens) population on isolates of six fungus species with leaf endophytic stages. The hypothesis tested was that leaf essential oil phenotypes would have differential effects in vitro on these endophytic species. Another objective was to determine whether differences in response to redwood essential oils existed among pathogens isolated from redwood and a mutalistic endophtye never isolated from redwood. These species were: Botrytis cinerea, an opportunist generalist pathogen able to attack redwood; Pestalotiopsis funerea, Phomopsis occulta and Seiridium juniperi, actual or potential conifer pathogens isolated as leaf endophytes in redwood; Cryptosporiopsis abietna, a common conifer endophyte with uncertain ecological status isolated from redwood; and Meria parkeri, a mutalistic endophyte known only from Douglas fir. The four essential oil phenotypes were uniformly inhibitory for some species and differentially so for others. Susceptibility to the four phenotypes varied widely within and among fungus species. The conifer-specific pathogens were the least susceptible and the Douglas fir endophyte the most; the other two displayed intermediate susceptibility. The diversity of responses by these fungus species suggests that these redwood terpenoids may have a differential intra- and interspecific importance in preventing pathogenic activity in the species found within redwood foilage.