大腹园蛛丝腺的氨基酸组成分析

通过解剖大腹园蛛,获得５种丝腺体,并对各丝腺蛋白进行了氨基酸组成分析和蛋白质相对分子质量测定,比较了不同丝腺体蛋白质组成的差异,发现不同丝腺体蛋白质氨基酸组成中Ｇｌｙ和Ｇｌｕ均有较高含量,而Ｓｅｒ的含量并不高,壶状腺中含有较高的Ｐｒｏ,而管状腺中含有较高的Ａｒｇ．同时发现不同丝腺体蛋白质的相对分子质量存在较明显差异,例如集合腺中不同相对分子质量的蛋白质分布较均匀,而在葡萄状腺中大分子质量的蛋白质明显高于小分子质量蛋白质．     

Three vital RNA functions and interactions in the process of silk gland apoptosis in silkworm Bombyx mori

The Silkworm Bombyx mori is an important insect in terms of economics and a model organism with a complete metamorphosis. The economic importance of silkworms is dependent on the functions of the silkgland, a specialized organ that synthesizes silk proteins. The silk gland undergoes massive degeneration during the larval to pupal stage, which involves in cell apoptosis. In this paper, high throughput sequencing was used to detect the expression of messenger RNA (mRNA), long noncoding RNA (lncRNA), and microRNA (miRNA) from silk glands of Day 3 in the fifth instar larvae (L5D3) and the spinning 36h (sp36h). We analyzed the Gene Ontology (GO) functions of target genes of the differentially expressed lncRNAs and miRNAs. We investigated the regulations of mRNA, lncRNA, and miRNA on silk gland apoptosis in L5D3 and sp36h. In total, 10,947 lncRNAs were detected in the silk gland and the index number TCONS‐00021360 lncRNA may be involved in the process of apoptosis. In addition, 344 miRNAs targeted 285 mRNAs were related to the death process under GO entry. The results indicated that miRNAs play an important role in the molecular regulation of the silk gland apoptosis compared with that of lncRNAs. Finally, we screened 746 lncRNAs and 20 miRNAs that might interact with BmDredd, and drew an interaction network among them.     

Isolated Pasture Trees and the Vegetation under their Canopies in the Chiapas Coastal Plain,Mexico1

The Coastal Plain of Chiapas (southern Mexico) was formerly covered by large tracts of subhumid tropical forests but is heavily deforested at present. In this region, 15 pastures were selected to characterize species composition of isolated trees, as well as to describe species composition, growth form patterns, and patterns of dispersal units in the vegetation growing under their canopies. The 65 recorded pasture trees belonged to 20 species and 11 families, of which Fabaceae and Moraceae were the most species-rich. Coccoloba barbadensis (Polygonaceae) and Enterolobium cyclocarpum (Fabaceae) were the most abundant and frequent trees in the studied pastures. More than half (55%) of isolated tree species were fleshy-fruited. In the vegetation sampled under pasture trees, 134 species and 45 families were found. Fabaceae and Poaceae had the largest numbers of species. Herbs were the predominant growth form (46.3%), followed by shrubs (23.9%), trees (23.1%), and lianas (2.2%); 6 species could nor be placed in any growth form category. Most species of this flora were fleshy-fruited (43.3%), followed by heavy, gravity-dispersed fruits (17.9%). The analysis of dispersal units by growth form category confirmed the prevalence of fleshy fruits, although their predominance was not so obvious among herb species. Almost half (49.2%) of the flora under pasture trees was typical of secondary vegetation; this pattern was true for herbs but not for most woody species, which were typical of primary vegetation. A numeric classification of the vegetation samples taken under pasture trees produced eight floristic groups, all of which were independent of the specific identity of pasture trees. No significant effect of dispersal unit type of pasture tree on the characteristics of the vegetation growing under them was found. Future attempts to re-create the original forest cover using isolated trees in pastures as regeneration foci should pay more attention to the maintenance of a large specific diversity independently of the dispersal types among these components of tropical landscapes.     

Gene expression analysis in the larval silk gland of the eri silkworm Samia ricini

Insects produce silk for a range of purposes. In the Lepidoptera, silk is utilized as a material for cocoon production and serves to protect larvae from adverse environmental conditions or predators. Species in the Saturniidae family produce an especially wide variety of cocoons, for example, large, golden colored cocoons and those with many small holes. Although gene expression in the silk gland of the domestic silkworm (Bombyx mori L.) has been extensively studied, considerably fewer investigations have focused on members of the saturniid family. Here, we established expression sequence tags from the silk gland of the eri silkworm (Samia ricini), a saturniid species, and used these to analyze gene expression. Although we identified the fibroin heavy chain gene in the established library, genes for other major silk proteins, such as fibroin light chain and fibrohexamerin, were absent. This finding is consistent with previous reports that these latter proteins are lacking in saturniid silk. Recently, a series of fibrohexamerin‐like genes were identified in the Bombyx genome. We used this information to conduct a detailed analysis of the library established here. This analysis identified putative homologues of these genes. We also found several genes encoding small silk protein molecules that are also present in the silk of other Lepidoptera. Gene expression patterns were compared between eri and domestic silkworm, and both conserved and nonconserved expression patterns were identified for the tested genes. Such differential gene expression might be one of the major causes of the differences in silk properties between these species. We believe that our study can be of value as a basic catalogue for silk gland gene expression, which will yield to the further understanding of silk evolution.     

Spider silks: recombinant synthesis,assembly, spinning,and engineering of synthetic proteins

Since thousands of years humans have utilized insect silks for their own benefit and comfort. The most famous example is the use of reeled silkworm silk from Bombyx mori to produce textiles. In contrast, despite the more promising properties of their silk, spiders have not been domesticated for large-scale or even industrial applications, since farming the spiders is not commercially viable due to their highly territorial and cannibalistic nature. Before spider silks can be copied or mimicked, not only the sequence of the underlying proteins but also their functions have to be resolved. Several attempts to recombinantly produce spider silks or spider silk mimics in various expression hosts have been reported previously. A new protein engineering approach, which combines synthetic repetitive silk sequences with authentic silk domains, reveals proteins that closely resemble silk proteins and that can be produced at high yields, which provides a basis for cost-efficient large scale production of spider silk-like proteins.     

Ultrastructure of spider thread anchorages

Spiders attach silken threads to substrates by means of glue-coated nanofibers (piriform silk), spun into disc-like structures. The organization and ultrastructure of this nano-composite silk are largely unknown, despite their implications for the biomechanical function and material properties of thread anchorages. In this work, the ultrastructure of silken attachment discs was studied in representatives of four spider families with Transmission Electron Microscopy to facilitate a mechanistic understanding of piriform silk function across spiders. Based on previous findings from comparative studies of piriform silk gland morphology, we hypothesized that the fibre-glue proportion of piriform silk differs in different spiders, while the composition of fibre and glue fractions is consistent. Results confirmed large differences in the relative proportion of glue with low amounts in the orb weaver Nephila senegalensis (Araneidae) and the hunting spider Cupiennius salei (Ctenidae), larger amounts in the cobweb spider Parasteatoda tepidariorum (Theridiidae) and a complete reduction of the fibrous component in the haplogyne spider Pholcus phalangioides (Pholcidae). We rejected our hypothesis that glue ultrastructure is consistent. The glue is a colloid with polymeric and fluid fractions that strongly differ in proportions and assembly. We further confirmed that in all species studied both dragline and piriform silk fibres do not make contact with the environmental substrate. Instead, adhesion is established by a thin dense skin layer of the piriform glue. These results advance our understanding of piriform silk function and the interspecific variation of its properties, which is significant for spider biology, web function and the bioengineering of silk.     

Ski slope vegetation at Snoqualmie Pass, Washington State, USA, and a comparison with ski slope vegetation in temperate coniferous forest zones

Ski slope vegetation at Snoqualmie Pass in Washington State, USA, was surveyed in order to identify community types and to compare it with vegetation development patterns in Japan. Ski slopes in Japan, most of which were constructed after 1960, underwent heavy land recontouring, while those at Snoqualmie Pass were constructed before 1950 with less modification. Three points apply to Japanese ski slope vegetation and differentiate these slopes from those at Snoqualmie Pass: (i) grasslands of introduced species are widespread and persistent; (ii) unvegetated patches are uncommon; and (iii) wetland vegetation has developed. These differences are mainly derived from the intensity of human impact, history of the slope and its scale: namely, ski slopes in Washington are older and larger than those in Japan. Ski slope vegetation in Washington was primarily differentiated by a soil moisture gradient. The large size of Washington ski slopes permitted the inclusion and development of wetland habitats, whereas most ski slopes in Japan are constructed on ridges and do not contain wetlands. Most introduced species in Japan are eliminated soon after seeding. In contrast, the long-term management of ski slopes decreased soil erosion and/or unvegetated patches in Washington and created relatively permanent grasslands composed of introduced species. Tsuga heterophylla and Abies amabilis were found established on the ski slopes in Washington, whereas in Japan the pioneer tree species are shade-intolerant broadleaved species. These differences may be a result of the different disturbance histories of ski slopes in the two countries. In addition, along with the conifers, early successional forbs such as Anaphalis margaritacea and Epilobium angustifolium are well established on Washington ski slopes. Results show that disturbances created by ski slope development greatly affect the vegetation, even on older, less heavily impacted ski slopes.     

Silk Weave and Silk Glands in Aquatic Instars of Two Species of Helicopsyche von Siebold, 1856 (Trichoptera,Helicopsychidae)

Under SEM the silk weave in the snail-like cases of Helicopsyche crispata and H. shuttleworthi, the two species present in Italy consist of several types of meshes. The silk which connects the sand grains of the external wall is made up of multi-layered threads forming irregular meshes. The sand grains of the vertical pillars in the wall of the centr al columella are held together by very loosely woven silk and are supported by thick silken threads. The pupal silken membrane consists of concentric threads and the pupal case is attached to the substrate by a disordered mass of silken threads. The two glands which secrete the silk are long, double folded tubes.     

Ant diversity in an Amazonian savanna: Relationship with vegetation structure,disturbance by fire,and dominant ants

Abstract The savannas of South America support a relatively diverse ant fauna, but little is known about the factors that influence the structure and dynamics of these assemblages. In 1998 and 2002, we surveyed the ground‐dwelling ant fauna and the fauna associated with the woody vegetation (using baits and direct sampling) from an Amazonian savanna. The aim was to evaluate the influence of vegetation structure, disturbance by fire and dominant ants on patterns of ant species richness and composition. Variations in the incidence of fires among our 39 survey plots had no or only limited influence on these patterns. In contrast, spatial variations in tree cover and cover by tall grasses (mostly Trachypogon plumosus), significantly affected ant species composition. Part of the variation in species richness among the study plots correlated with variations in the incidence of a dominant species (Solenopsis substituta) at baits. Ant species richness and composition also varied through time, possibly as an indirect effect of changes in vegetation cover. In many plots, and independently of disturbance by fire, there was a major increase in cover by tall grasses, which occupied areas formerly devoid of vegetation. Temporal changes in vegetation did not directly explain the observed increase in the number of ant species per plot. However, the incidence of S. substituta at baits declined sharply in 2002, especially in plots where changes in vegetation cover were more dramatic, and that decline was correlated with an increase in the number of ground‐dwelling species, a greater turnover of bait‐recruiting species and the appearance of the little fire ant Wasmannia auropunctata. The extent to which these changes in fact resulted from the relaxation of dominance by S. substituta is not clear. However, our results strongly suggest that the ant fauna of Amazonian savannas is affected directly and indirectly by the structure of the vegetation.     

Firefly distribution and abundance on mangrove vegetation assemblages in Sepetang estuary,Peninsular Malaysia

Pteroptyx fireflies are commonly reported to congregate in large numbers in mangroves. Not much is known about the relationships between firefly distribution and abundance with specific mangrove vegetation assemblages. We conducted a study to investigate the vegetation assemblages that structure the distribution and abundance of Pteroptyx tener in Peninsular Malaysia. The distribution and abundance of fireflies were assessed along an 8 km stretch of mangroves in Sepetang estuary using visual assessment. Statistical analysis was carried out to test the correlation between length of display section and percentage cover of P. tener colonies and the relationship between percentage cover of fireflies with different vegetation assemblages. Five distinct vegetation assemblages were identified comprising different combination of four mangrove species. It was found that shorter display sections had higher percentage cover of P. tener colonies. In addition, vegetation assemblage which consisting of mainly Sonneratia caseolaris and Nypa fruticans was the most preferred type. The results of this study point to the necessity to consider not only a single mangrove species but the entire vegetation assemblage for firefly conservation.     

Geographic Range,Habitats, and Host Plants of Bromeliad‐living Jumping Spiders (Salticidae)1

Although spiders are a very diverse group on vegetation, their associations with plants are poorly known. Some salticid species specifically use Bromeliaceae as host plants in some regions of South America. In this study, I report the geographic range of these spider‐bromeliad associations, and whether the spiders inhabit particular bromeliad species and vegetation types, as well as open areas or interior of forests. Nine salticid species were found to be associated with up to 23 bromeliad species in cerrados (savanna‐like vegetation), semideciduous and seasonal forests, coastal sand dune vegetation, restingas, inselbergs, highland forests, chacos, and rain forests at 47 localities in Brazil, Paraguay, Bolivia, and Argentina. Some species were typically specialists, inhabiting almost exclusively one bromeliad species over a large geographic range (e.g., Psecas chapoda on Bromelia balansae), whereas others were generalists, occurring on up to 7–8 bromeliad species (e.g., Psecas sp., Eustiromastix nativo, and Coryphasia sp. 1). The regional availability of bromeliad species among habitats may explain this pattern of host plant use. More jumping spiders were found on bromeliads in open areas than on bromeliads in the interior of forests. These results show that several jumping spider species may be strictly associated with the Bromeliaceae in the Neotropics. This is one of the few studies to show host‐specific associations for spiders on a particular plant type over a wide geographic range.     

Determination of diagnostic species with statistical fidelity measures

Abstract. Statistical measures of fidelity, i.e. the concentration of species occurrences in vegetation units, are reviewed and compared. The focus is on measures suitable for categorical data which are based on observed species frequencies within a vegetation unit compared with the frequencies expected under random distribution. Particular attention is paid to Bruelheide's u value. It is shown that its original form, based on binomial distribution, is an asymmetric measure of fidelity of a species to a vegetation unit which tends to assign comparatively high fidelity values to rare species. Here, a hypergeometric form of u is introduced which is a symmetric measure of the joint fidelity of species to a vegetation unit and vice versa. It is also shown that another form of the binomial u value may be defined which measures the asymmetric fidelity of a vegetation unit to a species. These u values are compared with phi coefficient, chi‐square, G statistic and Fisher's exact test. Contrary to the other measures, phi coefficient is independent of the number of relevés in the data set, and like the hypergeometric form of u and the chi‐square it is little affected by the relative size of the vegetation unit. It is therefore particularly useful when comparing species fidelity values among differently sized data sets and vegetation units. However, unlike the other measures it does not measure any statistical significance and may produce unreliable results for small vegetation units and small data sets. The above measures, all based on the comparison of observed/expected frequencies, are compared with the categorical form of the Dufrêne‐Legendre Indicator Value Index, an index strongly underweighting the fidelity of rare species. These fidelity measures are applied to a data set of 15 989 relevés of Czech herbaceous vegetation. In a small subset of this data set which simulates a phytosociological table, we demonstrate that traditional table analysis fails to determine diagnostic species of general validity in different habitats and large areas. On the other hand, we show that fidelity calculations used in conjunction with large data sets can replace expert knowledge in the determination of generally valid diagnostic species. Averaging positive fidelity values for all species within a vegetation unit is a useful approach to measure quality of delimination of the vegetation unit. We propose a new way of ordering species in synoptic species‐by‐relevé tables, using fidelity calculations.     

Use of local knowledge for assessing vegetation changes in the Southern Gadarif Region,Sudan

The vegetation cover in Gadarif Region, Sudan, underwent drastic changes within the last 60 years because of the combined effect of anthropogenic and climatic factors. As a consequence, a large number of plant species are threatened or even became extinct, and vast areas are now deforested. The purpose of this study is to use the local knowledge as a tool to identify and describe patterns of vegetation changes associated with the introduction of mechanized rain‐fed agriculture in the southern Gadarif Region. Data were collected by interviewing 10 key informants and 41 large‐scale farmers. The results provided rich ethnobotanical knowledge and a clear historical perspective of vegetation changes including plant species which have disappeared, decreased and increased in the area. The main factors leading to changes in plant species composition and abundance were vegetation clearance, charcoal and firewood production, wood cuttings, grazing and recently herbicides application. Respondents acknowledged that grazing, duration of abandonment, length of cultivation period, amount and variability of rainfall, fire events and weed composition are the major factors determining succession on fallow land. Farmers showed interest to preserve some multi‐purpose woody species (e.g. Acacia senegal, Balanites aegyptiaca) in their land. Such species should be given priority in rehabilitation activities.     

Effects of the common cormorant,phalacrocorax carbo,on evergreen forests in two nest sites at Lake Biwa,Japan

The effects of the habitation of the common cormorant on vegetation were evaluated in two colonies in Lake Biwa, central Japan. The state of the vegetation of each colony was classified arbitrarily into the following three types according to the appearance of the tree, shrub and herb layers; dense tree layer (Type 1), sparse tree layer and herb layer (Type 2), and sparse tree layer with dense herb layer (Type 3). The density of cormorant nesting was almost similar among the three types, except for part of Type 2. Trees, especially large ones on which cormorants nested, were found to be heavily damaged, and there were few seedlings and saplings found under the canopy trees.Chamaecyparis obtusa andCryptomeria japonica were more heavily damaged than other evergreen and deciduous trees. In the herb layer, only a few species such asReynoutria japonica orPhytolacca americana were abundant. These results suggest that the habitation of cormorants could simplify the structure and the species composition of forests.     

Distinguishing signal from noise: Long-term studies of vegetation in Makhtesh Ramon erosion cirque,Negev desert,Israel

We consider three case studies of long-term plant population dynamics in Makhtesh Ramon erosion cirque in the central Negev desert of Israel. We show that rainfall is the major driving variable in this system, and that it creates large temporal and spatial variation in plant species diversity and vegetation community composition. This variability makes it extremely difficult to distinguish `signal' (= pattern in vegetation) from `noise' (random spatial and temporal variance). Our long-term vegetation studies in permanent plots arranged along the length of the cirque, initiated in 1990 and continuing, show that there is high spatial and temporal variance in plant species' incidences and abundances. This is particularly true of annual plant species. However, using pairs of fenced and unfenced plots arranged along the major abiotic gradient, altitude (which mirrors changes in rainfall), we were able to tease apart the effects of variance in rainfall and herbivory. We found significant negative effects of herbivory by the re-introduced Asiatic wild ass (Equus hemionus) on plant cover and on vegetation community composition. In a study of the effects of herbivory by dorcas gazelles (Gazella dorcas) on the lily Pancratium sickenbergeri, we found that there was little inter-annual fluctuation in lily population size in two sand dunes in Makhtesh Ramon in spite of the high percentage of lilies that is removed by the gazelles and the almost complete herbivory of flowers by these herbivores. This result indicates that the dune lily populations may be maintained by dispersal of seed from other lily populations elsewhere in Makhtesh Ramon where gazelles are rare or absent.     

Promotion of exotic weed establishment by endangered giant kangaroo rats (Dipodomys ingens) in a California grassland

Giant kangaroo rats (Dipodomys ingens) continually modify their burrow precincts by digging tunnels, clipping plants, and other activities. In the valley grasslands of the Carrizo Plain Natural Area (San Luis Obispo County, California), this chronic disturbance to soil and vegetation promoted the establishment of exotic ruderal and early successional plant species. Erodium cicutarium, Bromus madritensis ssp. rubens, and other Mediterranean annuals were found to constitute a very large proportion of the vegetation on giant kangaroo rat precincts. When vegetation on precincts was compared with the vegetation in less disturbed intermediate areas located between precincts, species richness, cover and frequency of exotic plants were significantly greater on precincts. The reverse was found for native species. In addition, exotic species encountered in this study had significantly larger seeds than did native species, suggesting that these granivorous kangaroo rats preferentially cache large weed seeds on their precincts. Since the kangaroo rats depend on exotic plants for food and the exotic plants depend upon the kangaroo rats to disturb their habitat continually, the weed-kangaroo rat relationship is mutualistic. This strong relationship may also inhibit population growth of native grassland plants which occupy disturbed habitats but have difficulty competing with exotic weeds for resources. From a conservation perspective, this mutualism presents an intractable management dilemma. Restoration of valley grasslands where endangered giant kangaroo rats occur, to conditions where native species dominate, may be impossible.     

Vegetation and soil recovery following Eucalyptus grandis removal in Limpopo Province,South Africa

South African terrestrial ecosystems are invaded by hundreds of alien plant species, and large‐scale clearing based on the passive restoration assumption that cleared areas will recover unaided is underway. This study assessed the recovery of vegetation and soil properties, three years following Eucalyptus grandis clearing using fell‐and‐removal and fell‐and‐stackburn methods at Zvakanaka Farm in Limpopo Province, South Africa. The main aim was to ascertain the extent of vegetation and soil recovery, as well as determining which clearing methods facilitate passive vegetation and soil restoration. Results indicate significantly (p < 0.001) lower native species diversity, cover and composition in cleared than in uninvaded sites. However, the recorded low species diversity and composition in cleared sites were more pronounced in the fell‐and‐stackburn than in the fell‐and‐removal sites. Measured soil physical properties varied, with compaction being higher in fell‐and‐removal, whereas soils were more repellent in fell‐and‐stackburn sites. The study concludes that vegetation and soil recovery, following E. grandis clearing, is complex and involves several interacting factors, which are linked to invasion history and intensity. Therefore, for vegetation and soil properties to recover, following E. grandis removal, the clearing programme should consider active restoration techniques, for example soil manipulation and native plant seeding.     

Roosting site selection in the endangered damselfly, Coenagrion mercuriale, and implications for habitat design

A successful conservation strategy for an insect species should address the habitat requirements of all life stages and all activities performed by those life stages. In this paper the night-time roosting habitat and behaviour of the endangered damselfly Coenagrion mercuriale (Odonata: Coenagrionidae) was investigated by marking damselflies with UV fluorescent paint. Night-time observations revealed that individuals did not roost together and those that were recorded on more than one occasion did not return to the same spot each night. There was no apparent preference for roosting close to the watercourses. C. mercuriale roosted towards the top of the vegetation and this vegetation was considerably taller than the mean height of the vegetation in the study area. Adults were strongly associated with two tussock-forming monocots, Juncus inflexus and Deschampsia cespitosa. Differences in the abundance of these plants were shown to result in large differences in the numbers of C. mercuriale roosting in different parts of the site. The importance of providing these structural elements of habitat as part of a wider conservation strategy for this species is discussed.     

The impact of suburbanization on remnant coastal vegetation in Hobart,Tasmania

Abstract. Changes in vascular species composition and abundance were examined in coastal vegetation at Hobart, Tasmania, Australia over a period of 13 yr, during which suburbanization extended to cover a large proportion of its hinterland. There were significant increases in the richness and cover of exotic vascular plant species, most of which derived from the Mediterranean basin or southern Africa. While most of the introduced species were confined to vegetation with a high exotic component, and close to domestic gardens, some, including the South African coastal shrub, Chrysanthemoides monilifera, expanded in otherwise native vegetation relatively remote from gardens. The impact of proximity to gardens on the relative abundance of exotics and natives in coastal vegetation in 1997 best correlated with the pattern of distance from gardens in 1966, suggesting that there is, at least, a 30‐yr lag period in transformation from largely native to substantially exotic vegetation. This lag period provides an opportunity to reduce exotic invasion problems before they become severe.     

Structure of the woody vegetation in disturbed and undisturbed arid savanna,Botswana

The structure of woody vegetation was studied in little disturbed arid savanna and in adjacent over-grazed vegetation. In the over-grazed areas density and cover of woody plants were higher than in the less disturbed vegetation. The difference was accounted for by one species, Acacia mellifera, which was strongly dominant in the overgrazed vegetation. In the open savanna, the woody species varied in height from small shrubs to trees, while the dense shrub vegetation was of uniformly low stature.It is suggested that, while the differences in total abundance of woody species depend on differences in the amount of soil water available for woody growth, differences in species composition and height distribution are governed by the spatial and temporal distribution of water in the soil profile.