Synthesis of di- and tri-saccharides corresponding to receptor structures recognised by pyelonephritogenic E. coli fimbriae (pili)

Syntheses are described of di- and tri-saccharides required for studies of the inhibition of adhesion by means of fimbriae of pyelonephritogenic E. coli bacteria to epithelium cells in the urinary tract containing suitable receptor sites. The disaccharides are the p-nitrophenyl and methyl glycosides of 4-O-α-d-galactopyranosyl- β-d-galactopyranose, and the trisaccharides are the p-nitrophenyl and methyl glycosides of 4-O-(4-O-α-d-galactopyranosyl-β-d-galactopyranosyl)-β-d-glucopyranose. The key aglycons were the 1,2,3,6-tetrabenzoate of α-d-galactose and the 1,2,3,6,- 2′,3′,6′-heptabenzoate of α-lactose. Glycosidations were performed with 2,3,4,6- tetra-O-benzyl-α-d-galactopyranosyl chloride as glycosylating agent and silver triflate as promoter.     

Synthesis of mucin O-glycan core structures as their p-nitro- and p-aminophenyl glycosides

For the investigation of glycosidases, and for the construction of glycan arrays the p-nitrophenyl- and p-aminophenyl glycosides of mucin O-glycan core structures 1–7 and the 2,6-ST-antigen have been chemically synthesized using d-galactose as a precursor for GalNAc residues. GlcNAc residues have partly been introduced using a 4,6-di-O-benzoyl-2,3-N,O-oxazolidinone-protected donor, which allowed deprotection of the formed di- and tri-saccharides in one step using sodium methoxide.     

The synthesis of α-isomalto-oligosaccharide derivatives and their protein conjugates

2-[4-(p-Toluenesulfonamido)phenyl]ethyl 2,3,4-tri-O-benzyl-α-D-glucopyranoside was condensed with 2,3,4-tri-O-benzyl-6-O-(N-phenylcarbamoyl)-1-O-tosyl-D-glucopyranose to give 2-[4-(p-toluenesulfonamido)phenyl]ethyl 2,3,4,2′,3′,4′-hexa-O-benzyl-6′-O-(N-phenylcarbamoyl)α-isomaltoside. The disaccharide was decarbanilated in ethanol with sodium ethoxide. The sequence of coupling with the 1-O-tosyl-glucose derivative followed by decarbanilation was repeated to form the tri- and tetra-saccharide derivatives. The di-, tri-, and tetra-oligo-saccharides, were deblocked with sodium in liquid ammonia to give the 2-(4-aminophenyl)ethyl α-isomalto-oligosaccharides, which were diazotized with sodium nitrite in acid, and then coupled to bovine serum albumin and edestin to give the protein conjugates.     

Synthesis of methyl 4,6-O-methylene-D-glycopyranosides

Methyl 4,6-O-methylene-D-glycopyranosides having the α-D-altro, α- and β-D-gluco, α-D-manno, and α-D-galacto configurations were prepared in 3.4 to 27.4% yields by condensing formaldehyde from 1,3,5-trioxane with the methyl glucosides in anhydrous 1,4-dioxane at 95° with boron trifluoride as the catalyst. A crystalline methyl 2,3:4,6-di-O-methylene-α-D-mannopyranoside was also isolated. Crystalline methyl 4,6-O-methylene 2,3-di-O-p-tolylsulfonyl-α-D-galacto- and α-D-glucopyranosides were prepared in 78 and 54.4% yields. N.m.r. coupling constants of the 2,3-di-O-acetyl derivatives of the 4,6-O-methylene glycosides were used to establish the Cl(D) conformation for each derivative.     

Polysaccharide of nectarine gum exudate: Comparison with that of peach gum

The gum exudate polysaccharide from the trunk of nectarine (PPNEC) was compared with that of peach, being composed of Ara, Xyl, Man, Gal, and uronic acids in 37:13:2:42:6 molar ratio and had M_w 3.93 × 10⁶ g mol^?1, compared with 5.61 × 10⁶ g mol^?1 for peach gum polysaccharide. Methylation analysis of PPNEC indicated a highly branched structure with relatively high amounts of di- (16%) and tri-O-substituted (9%) Galp units and nonreducing end-units of Araf (26%) and Xylp (17%). Combination with ¹³C NMR data, showed the presence of α-l-Araf (nonreducing end, 3-O-, 5-O-, and 2,5-di-O-subst.), β-l-Arap (4-O- and 2,4-di-O-subst.), β-d-Galp (3-O-, 2,3-di-O-, 3,6-di-O-, and 3,4,6-tri-O-subst.), and α- and/or β-d-Xylp nonreducing end-units. A signal appeared from 4-O-Me-α-d-GlcpA units. PPNEC had structures similar to those of polysaccharide from peach tree gum, although in different proportions and with a lower M_w.     

Synthesis of the tetrasaccharide repeating-unit of the O-specific polysaccharide from Salmonella senftenberg

The oligosaccharide β-d-Man-(1 → 4)-α-l-Rha (1 → 3)-d-Gal-(6 ← 1)-α-d-Glc, which is the repeating unit of the O-specific polysaccharide chain of the lipopolysaccharide from Salmonella senftenberg, was obtained by glycosylation of benzyl 2,4-di-O-benzyl-6-O-(2,3,4-tri-O-benzyl-6-O-p-nitrobenzoyl-α-d-glucopyranosyl)-β-d-galactopyranoside or benzyl 2-O-acetyl-6-O-(2,3,4-tri-O-benzyl-6-O-p-nitrobenzoyl-α-d-glucopyranosyl)-β-d-galactopyranoside with 3-O-acetyl-4-O-(2,3,4,6-tetra-O-acetyl-β-d-mannopyranosyl)-β-l-rhamnopyranose 1,2-(methyl orthoacetate) followed by removal of protecting groups.     

The synthesis of antigenic determinants for yeast d-mannan,and a linear (1→6)-α-d-gluco-d-mannan,and their protein conjugates

2-O-Benzoyl-3,4,6-tri-O-benzyl-1-O-tosyl-d-mannopyranose and 2,3,4-tri-O- benzyl-6-O-(N-phenylcarbamoyl)-1-O-tosyl-d-glucopyranose were allowed to react with partially blocked 2-[4-(p-toluenesulfonamido)phenyl]ethyl α-d-manno- and -gluco-pyranosides. Disaccharides having α-d-Manp-(1→2)-α-D-Manp, α-d-manp-(1→6)-α-d-Manp, α-d-Manp-(1→6)-α-d-Manp, and α-d-Glcp-(1→6)-α-d-Manp structures, and a branched trisaccharide having the structure α-d-Manp-(1→2)-[α-d-Manp-(1→6)]-α-d-Manp were synthesized. The oligosaccharides were deblocked with sodium in liquid ammonia to give glycopyranosides having a free primary aromatic amine which were converted into isothiocyanate derivatives with thiophosgene. The functionalized oligosaccharides were then coupled to bovine serum albumin to give protein conjugates.     

Double diastereoselection explains limitations in synthesizing mannose-containing β-(1,3)-glucans

It is known that 3-O-glycosylation of glucosidic acceptors bearing acyl groups in the 4 and 6 positions instead of a 4,6-O-benzylidene ring mainly affords α-glycosides. Described here is an unexpected stereochemical outcome for elongation at glucose O-3 of a β-d-Glcp-(1→3)-α-d-Manp disaccharide using peracetylated ethyl thioglucoside as a donor. This unexpected reaction was correlated with match-mismatch effects, as shown by efficient coupling of the same acceptor by a donor of l-configuration.     

Synthesis of crystalline derivatives of 6-deoxy-d-allo- and -l-talo-furanosyl bromide suitable for nucleoside synthesis

6-Deoxy-2,3,5-tri-O-(p-nitrobenzoyl)-β-d-allo- and -α-l-talo-furanosyl bromide (6 and 11) have been synthesized from methyl 2,3-O-isopropylidene-β-d-ribo-pentodialdo-1,4-furanoside (1). Treatment of 1 with methyl Grignard reagent, followed by (p-nitrobenzoyl)ation, afforded two 5-epimers, methyl 6-deoxy-2,3-O-isopropylidene-5-O-(p-nitrobenzoyl)-β-d-allo- and -α-l-talo-furanosides (3 and 8) which were fractionally recrystallized. The l-talo isomer (8) separated first, and was treated with acid to remove the isopropylidene group, the product (p-nitrobenzoyl)ated, and the ester reacted with hydrogen bromide in acetic acid, to afford crystalline compound 11. The mother liquor from the fractional recrystallization was treated with acid, whereby methyl 6-deoxy-5-O-p-nitrobenzoyl)-d-allofuranoside was isolated. It was (p-nitrobenzoyl)ated, and the ester treated with hydrogen bromide in acetic acid, to afford crystalline bromide 6.     

Synthesis of p-isothiocyanatophenyl 3-O-(3,5-dideoxy-α-d-ribo-hexopyranosyl)-α-d-mannopyranoside

The synthesis of the title disaccharide derivative (1C), corresponding to the Salmonella O-factor 2¹, is described. Treatment of 2-O-benzyl-4-O-p-nitrobenzoyl-α-paratosyl bromide (5) with p-nitrophenyl 2-O-benzyl-4,6-O-benzylidene-α-d-mannoside in dichloromethane, in the presence of mercuric cyanide, gave the α- and β-linked disaccharide derivatives (6a and 6b) in yields of 34 and 5%, respectively. The disaccharide derivative 10 can react with free amino groups in proteins to produce artificial antigens useful in studies on Salmonella immunology.     

Iridoids from Gentiana loureirii

Iridoid glycosides, 2′,3′,6′-tri-O-acetyl-4′-O-trans-p-(O-β-d-glucopyranosyl)coumaroyl-7-ketologanin (1), 2′-O-caffeoylloganic acid (2), 2′-O-p-hydroxybenzoylloganic acid (3), 2′-O-trans-p-coumaroylloganic acid (4), and 2′-O-cis-p-coumaroylloganic acid (5), were isolated from whole plants of Gentiana loureirii along with six known iridoids, 7-ketologanin (6), loganin (7), loganic acid (8), sweroside, boonein, and isoboonein, and three other known compounds. Their structures were elucidated by spectroscopic means and chemical correlations. The isolated iridoids were evaluated for antibacterial and antioxidant activities, but were either inactive or very weakly active.     

Synthèse et étude R.M.N. de disaccharides et trisaccharides dans la série du l-rhamnose

Various di- and tri-saccharides containing l-rhamnose were synthesized by condensation of 2,3,4-tri-O-acetyl- or 2,3,4-tri-O-benzoyl-α-l-rhamnopyranosyl bromide with an unblocked glycopyranoside. The determination of the anomeric configuration of l-rhamnose saccharides by n.m.r. is difficult because structure has a greater effect on the spectra than does configuration. The α and β configurations and the position of the substitution may be assigned from the chemical shifts of H-5 and CH₃. In all the compounds having a β configuration, a shielding of the methyl group and a deshielding of the H-5 proton have been observed as compared to the compounds having an α configuration. The H-5 proton and the methyl group of peracetylated, (1→3)-linked α-l derivatives always resonate at higher fields than the corresponding protons of (1→6)-linked α-l derivatives.     

Structure and properties of the acylated anthocyanins from Vitis species

The acylated anthocyanins of Ives grapes have been isolated using column chromatography on polyamide and polyvinylpyrrolidone. Controlled hydrolysis with Dowex 50W-X8 ion exchange resin, KOH. peroxide oxidation and speciroscopic characterization revealed their tructure as the 3-(6-O-p-coumarylglucoside)-5-glucosides of cyanidin, peonidin, delphinidin, petunidin, and malvidin and the 3-(6-O-p-coumary lglucoside)s of delphinidin, petunidin and malvidin. On cellulose TLCs in the five solvent systems used, no clear-cut separation of these pigments could be obtained without their preliminary separation on polyamide and polyvinylpyrrolidone columns.     

Metabolomics-oriented isolation and structure elucidation of 37 compounds including two anthocyanins from Arabidopsis thaliana

In order to conduct metabolomic studies in a model plant for genome research, such as Arabidopsis thaliana (Arabidopsis), it is a prerequisite to obtain structural information for the isolated metabolites from the plant of interest. In this study, we isolated metabolites of Arabidopsis in a relatively non-targeted way, aiming at the construction of metabolite standards and chemotaxonomic comparison. Anthocyanins (5 and 7) called A8 and A10 were isolated and their structures were elucidated as cyanidin 3-O-[2-O-(β-d-xylopyranosyl)-6-O-(4-O-(β-d-glucopyranosyl)-E-p-coumaroyl)-β-d-glucopyranoside]-5-O-[6-O-(malonyl)-β-d-glucopyranoside] and cyanidin 3-O-[2-O-(2-O-(E-sinapoyl)-β-d-xylopyranosyl)-6-O-(4-O-(β-d-glucopyranosyl)-E-p-coumaroyl)-β-d-glucopyranoside]-5-O-[β-d-glucopyranoside] from analyses of 1D NMR, 2D NMR (¹H NMR, NOE, ¹³C NMR, HMBC and HMQC), HRFABMS, FT-ESI-MS and GC-TOF-MS data. In addition, 35 known compounds, including six anthocyanins, eight flavonols, one nucleoside, one indole glucosinolate, four phenylpropanoids and a derivative, together with three indoles, one carotenoid, one apocarotenoid, three galactolipids, two chlorophyll derivatives, one steroid, one hydrocarbon, and two dicarboxylic acids, were also isolated and identified from their spectroscopic data.     

Acylated malvidin 3-rutinosides in dusky violet flowers of Petunia integrifolia subsp. inflata

A new acylated anthocyanin was isolated from a strain of Petunia integrifolia subsp. inflata with dusky violet flowers (B1204d), and identified as malvidin 3-O-[6-O-(4-O-(4-O-(6-O-(trans-caffeoyl)-β-d-glucopyranosyl)-trans-p-coumaroyl)-α-l-rhamnopyranosyl)-β-d-glucopyranoside] as a major pigment. Also, two known pigments were found in these flowers, and determined to be malvidin 3-caffeoylrutinoside and 3-p-coumaroylrutinoside.     

Co-pigmentation and flavonoid glycosyltransferases in blue Veronica persica flowers

Glycosylation is one of the key modification steps for plants to produce a broad spectrum of flavonoids with various structures and colors. A survey of flavonoids in the blue flowers of Veronica persica Poiret (Lamiales, Scrophulariaceae), which is native of Eurasia and now widespread worldwide, led to the identification of highly glycosylated flavonoids, namely delphinidin 3-O-(2-O-(6-O-p-coumaroyl-glucosyl)-6-O-p-coumaroyl-glucoside)-5-O-glucoside (1) and apigenin 7-O-(2-O-glucuronosyl)-glucuronide (2), as two of its main flavonoids. Interestingly, the latter flavone glucuronide (2) caused a bathochromic shift on the anthocyanin (1) toward a blue hue in a dose-dependent manner, showing an intermolecular co-pigment effect. In order to understand the molecular basis for the biosynthesis of this glucuronide, we isolated a cDNA encoding a UDP-dependent glycosyltransferase (UGT88D8), based on the structural similarity to flavonoid 7-O-glucuronosyltransferases (F7GAT) from Lamiales plants. Enzyme assays showed that the recombinant UGT88D8 protein catalyzes the 7-O-glucuronosylation of apigenin and its related flavonoids with preference to UDP-glucuronic acid as a sugar donor. Furthermore, we identified and functionally characterized a cDNA encoding another UGT, UGT94F1, as the anthocyanin 3-O-glucoside-2″-O-glucosyltransferase (A3Glc2″GlcT), according to the structural similarity to sugar-sugar glycosyltransferases classified to the cluster IV of flavonoid UGTs. Preferential expression of UGT88D8 and UGT94F1 genes in the petals supports the idea that these UGTs play an important role in the biosynthesis of key flavonoids responsible for the development of the blue color of V. persica flowers.     

The synthesis of O-methyl derivatives of 4-thiopentofuranosides and 2,5-anhydropentoses

Heating of 2,3,5-tri-O-methyl-4-O-p-tolylsulfonyl-D-ribose diethyl dithioacetal and dibenzyl dithioacetal in aqueous pyridine gave 4-S-ethyl-2,3,5-tri-O-methyl-4-thio-l-lyxose and benzyl 2,3,5-tri-O-methyl-α-1,4-dithio-l-lyxofuranoside, respectively. Similar rearrangements to the 4-thiofuranoside were observed with 2,3,5-tri-O-methyl-4-O-p-tolylsulfonyl-D-xylose and -D-lyxose dibenzyl dithioacetals. 2,3,4-Tri-O-methyl- 5-O-p-tolylsulfonyl-D-ribose or -D-xylose dibenzyl dithioacetal, however, gave upon heating with sodium iodide in acetone 2,5-anhydro-3,4-di-O-methyl-D-ribose or -D-xylose dibenzyl dithioacetal, respectively.     

C-glycosylflavones from Oryza sativa

Eight flavone C-glycosides isolated from rice plant were found to act as probing stimulants for planthoppers. They have been identified as the known compounds schaftoside, neoschaftoside, carlinoside, isoorientin 2″-glucoside and the new constituents neocarlinoside (6-C-β-D-glucopyranosyl-8-C-β-L-arabinopyranosylluteolin), isoscoparin 2″-glucoside (chrysoeriol 6-C-β-D-(2-O-β-D-glucopyranosyl)glucopyranoside) and its 6?-p-coumaric and ferulic acid esters.     

Structural studies of plant gum from sap of the lac tree, Rhus vernicifera

The plant gum isolated from sap of the lac tree, Rhus vernicifera (China), was separated into two fractions having mol. wt. 84,000 and 27,700 by aqueous-phase gel-permeation chromatography. The fractions contain d-galactose (65 mol%), 4-O-methyl-d-glucuronic acid (24 mol%), d-glucuronic acid (3 mol%), l-arabinose (4 mol%), and l-rhamnose (3 mol%). Smith degradation of the carboxyl-reduced polysaccharides gives products of halved molecular weight, and these consist of a β-(1→3)-linked galactopyranan main chain and side chains made up of galactopyranose residues. Peripheral groups, such as α-d-Galp-, α-d-Galp-(1→6)-β-d-Galp-, 4-O-methyl-β-d-GlcpA-, and 4-O-methyl-β-d-GlcpA-(1→6)-β-d-Galp-, are attached to this interior core through β-(1→3)- or β-(1→6)-linkages.     

The synthesis of 6-deoxy-6-fluoro-α,α-trehalose and related analogues

Selective acid-catalysed methanolysis of 2,3,2′,3′-tetra-O-benzyl-4,6:4′,6′-di-O-benzylidene-α,α-trehalose yielded the monobenzylidene derivative, which was converted into the 4,6-dimesylate. Selective nucleophilic displacement of the primary sulphonyloxy group then gave 2,3-di-O-benzyl-6-deoxy-6-fluoro-4-O-mesyl-α-d-glucopyranosyl 2,3-di-O-benzyl-4,6-O-benzylidene-α-d-glucopyranoside. Removal of the protecting groups then yielded 6-deoxy-6-fluoro-α,α-trehalose. In addition, 6-deoxy-6-fluoro-4-O-mesyl-α,α-trehalose and a derivative of 4-chloro-4,6-dideoxy-6-fluoro-α-d-galactopyranosyl α-d-glucopyranoside were also prepared from the same substrate. Iodide displacement of 2,3-di-O-benzyl-4,6-di-O-mesyl-α-d-glucopyranosyl 2,3-di-O-benzyl-4,6-di-O-mesyl-α-d-glucopyranoside afforded the 6-iodide and 6,6′-di-iodide in yields of 31 and 36%, respectively. Similarly, the 6-azide and 6,6′-diazide were isolated in yields of 17 and 21%, respectively.