Characterization and isolation of DNA microsatellite primers for Arapaima gigas,an economically important but severely over‐exploited fish species of the Amazon basin

Arapaima gigas is a CITES II listed species, but it is also one of the most important food fish of the Amazon basin with a historically very large commercial and subsistence fishery. By the 1980s it became commercially extinct in many areas, and in early 2001 the Brazilian government banned all fishing, although this has not prevented illegal fishing. Therefore we developed 14 variable microsatellite markers for A. gigas to gain a knowledge of its population structure, which is needed to implement a sound management policy, and also to provide us with the forensic tools to manage and monitor this over‐exploited fish.     

Assessing Local Knowledge of Game Abundance and Persistence of Hunting Livelihoods in the Bolivian Amazon Using Consensus Analysis

We used cultural consensus models to test whether hunters shared perceptions of wildlife abundance and the relative importance of hunting and fishing in a Guarayo indigenous community in the Bolivian Amazon. Results show that highly prized animals that were considered rare are either those with lower reproductive rates and more sensitivity to land use changes and harvest (white-lipped peccary and spider monkey) or those with marked seasonal distribution patterns (barred sorubim and tiger-fish). Rapidly reproducing and resilient species (agouti and armored catfish) were perceived as abundant. More tapirs and red brocket deer were present than predicted by scientific models possibly because hunters were harvesting these species in new forest management areas. Residents identified hunting and fishing among their most important livelihood activities, recognized bush meat and fish as basic food resources, and expected wildlife harvests to be part of their future livelihoods, although market-based livelihoods and domestic replacements for bush meat were reported.     

Landscape variables affecting fishery yield in lake systems of the Central Amazon region, Brazil

According to fisheries data, lakes are important systems for fish production in the Amazon basin. However, there is no information about the relationship between landscape variables and fishing yield that allows foresight into potential resource exploitation in this environment. The present study aims to evaluate this relationship with the hypothesis: lakes of different shapes give the same fishery yield in the Amazon, after considering the effects of lake size, distance to the river, fishing effort, fuel and ice used. Fishery data from 1994 to 1996 were analyzed with regard to 3228 trips on 50 lakes of the main white water tributaries of the Amazon basin. Analysis of covariance was applied to test this hypothesis. With variables such as fishing grounds access, fishing effort and lake shape the model explained a significant 72% of variabilities in the fisheries yield. Fishing yields among lake systems were different, thus the null hypothesis was rejected (P < 0.05). Results indicate that dendritic lakes far distant from the main river have greater productivity than floodplain lakes because there are more habitats of fish refuge for reproduction and feed available to the fish; there are also more limitations to access by predators.     

Effects of modeling and lineage on fishing behavior in the small-eared bushbaby (otolemur garnettii)

Thirty-eight bushbabies(Otolemur garnettii)were subjects in an observational learning study. We exposed them to one of three modeling conditions: (1) fishing model—one that actually performed fishing behavior; (2) nonfishing model—one that performed as a model in every way except performance of fishing behavior; and (3) no model. We assessed them with regard to latency to approach the fishbowl, latency to make an initial fishing attempt, duration of time spent in the vicinity of the fishbowls, and number of actual fishing attempts. Results indicate that subjects that were exposed to either fishing or nonfishing models were faster to approach the fishbowls and spent more time in the vicinity of the fishbowls than animals in the no-model condition Lineage, i.e., whether or not the animals’ parents fished, rather than modeling condition, was the best predictor of the latency to initial fishing attempt and the number of attempts made.     

Animal-Related Activities and Appreciation of Animals Among Children and Adolescents

ABSTRACT

Five hundred and sixty-two children and adolescents, aged between nine and 15 years, from one urban and three rural areas in Southern Norway, completed a questionnaire in which they expressed their degree of preference for various animal species, participation in animal-related activities, and the presence of pets at home. The results showed that a majority of the respondents had an animal at home (71%), and participated in animal-related activities such as fishing (72%), feeding birds (74%), and reading about animals (66%). Participation in most animal-related activities decreased with increasing age. Pet owners liked farm and wild animals more than did respondents without pets. Positive associations were found between the liking of animal species and participation in animal-related activities. Gender differences were largest for horseback riding (girls most) and for fishing and hunting (boys most). Those who reported allergic reactions to animals, or had been injured by an animal, liked animals as much as, or more than, did the other respondents.     

Spatial and temporal distribution of fishing resources exploited by the Manaus fishing fleet, Amazonas, Brazil.

Fishing resources are important generators of income and food for the rural and urban people in the Amazon. The present paper investigates fishing and environmental variables determining fishing production landed in Manaus and evaluates the relative abundance of commercial fishes in the different sub-systems of the Central Amazon basin. Information collected was used to test the new catch index derived from multiple regressions with the following significant variables: number of fisherman days fishing; distance of the fishing ground from Manaus; amount of ice carried during the trip; and river level. There were no significant differences between mean catch values of the Purus, Madeira and Juruá sub-systems. These results suggest that the tributaries of the right margin were very similar and were the most productive in commercial terms. The actual production varies according to the recent magnitude of fishing effort, environmental variations and operational aspects of fishing, particularly ice consumption.     

Extinction of marine renewable resources: a demographic analysis

A simple (deterministic) population dynamics model is used to examine the level of fishing mortality at which a population is expected to be driven to extinction (F _crash). Values for F _crash are determined for six marine fish species (Cape hake, blue grenadier, blue warehou, school shark, gummy shark, and orange roughy) subject to commercial harvest. The sensitivity of the value of F _crash to changing the selectivity pattern of the fishery and the relationship between the size of the reproductive component of the population and subsequent births to allow for depensatory effects is examined. F _crash is greatest for highly productive species and when the fishery does not target immature animals. The ratio of F _crash to the fishing mortality at which maximum sustainable yield is achieved, F _MSY, is a decreasing function of the productivity of the population. The possibility of depensation has little impact on F _MSY but can substantially reduce the ratio F _crash/F _MSY. A series of stochastic simulations is conducted to assess the probability of detecting that the extent of fishing exceeds F _crash using the current IUCN A criterion. The results of these simulations are also used to determine the probability that the IUCN A criteria will be triggered when fishing takes place at F _MSY. The results indicate that there are substantial probabilities of incorrectly identifying species being harvested at F _MSY as being threatened during the 'fishing down' phase and also of not identifying species actually at risk of extinction if fishing mortality is not reduced. Received: January 14, 1999 / Accepted: April 27, 1999     

Non-management of Natural Resources: The Case of Inland Fisheries in the Mayan Zone,Quintana Roo,México

This study explores the management of inland fisheries on common lands (ejidos) within the Mayan Zone of Quintana Roo, Mexico. Qualitative survey data are used to examine whether there are (a) ongoing fishery conservation activities; (b) local caretakers of fishing sites; (c) restrictions on where fishing can take place; and (d) particular groups of individuals who lack the right to fish within the ejidos. Results indicate that in contrast to other local resources, fisheries in the ejidos have less defined use rights, being viewed as largely “open access”. In particular, most feel that outsiders can fish in an ejido if they abide by local rules (notably not damaging the local water bodies, asking consent to fish, and having a friend or relative in the community). However, there are within-community differences in views concerning management and conservation, with those more dependent on fishing being more likely to support exclusion of outsiders.     

Onset of and recovery from physiological stress in <Emphasis Type="Italic">Liocarcinus depurator</Emphasis> after trawling and air exposure under different seasonal conditions

The onset of and recovery from physiological stress in Liocarcinus depurator (Decapoda: Portunidae), that were trawled and subjected to emersion during fishing activities, was analysed in a field study in the Northern Adriatic Sea. Our working hypothesis intended to assess the development of physiological impairment due to air exposure during sorting operations, and the possible recovery trajectories after the return to sea of this by-caught species. The protocol we used included experimental trawling and quantification of physiological stress indicators (haemolymph concentrations of l-lactate, d-glucose, ammonia and pH) under different seasonal conditions. Immediately after being caught, when the fishing net was emptied on board, L. depurator showed higher physiological imbalance in the summer vs. winter experiments, highlighting the immediate effect of temperature shock due to the difference in temperature between the sea bottom and the deck (15–18 and 2°C in summer and winter, respectively). Experimental animals in the permanently emersed condition exhibited a progressive disruption of homeostasis in both seasons, as confirmed by a significant increase in lactate and a decrease in the pH of the haemolymph as a function of the emersion time. Ammonia levels were almost stable in the summer, when the physiological limits of this metabolite were reached immediately after animals were caught. In the winter, a significant increase in ammonia was observed over the time. This pattern can be attributed to the impairment of gill function, resulting in suffocation (manifested by marked haemolymph acidosis) and reduced ammonia excretion. Glucose concentration was revealed to be stable during air exposure in both seasons, though a higher concentration was recorded in the summer compared to the winter. The recovered individuals tended to return to pre-caught values for all of the haemolymph parameters we measured, though with different trajectories in the two seasons. From these results, we conclude that temperature shock, coupled with air exposure, influenced the ultimate stress level of this species to a greater extent than other effects of fishing.     

Impacts of animal traffic on the Brazilian Amazon parrots (Amazona species) collection of the Quinzinho de Barros Municipal Zoological Park,Brazil, 1986–2007

Eleven species of Amazon parrots (genus Amazona) are known to occur in Brazil, and nest poaching and illegal traffic pose serious conservation threats to these species. When the illegal owners realize these animals are incompatible with their expectations and lifestyle, or when the police arrests traders and owners, these trafficked animals are often considered unfit for release and sent to local zoos and captive breeders. A retrospective survey of animal and necropsy records from 1986 to 2007 was used to evaluate the impacts of animal traffic on the population composition and mortality patterns of Amazon parrots at the Quinzinho de Barros Municipal Zoological Park, Sorocaba, Brazil. Data were obtained for 374 Amazon parrots of ten Brazilian species, and there was evidence that the studied population could be split into two major groups: a majority belonging to the Amazona aestiva species and a minority belonging to the remaining species. In comparison, the animals of the first group were more frequently admitted from traffic‐related origins (98 vs. 75%), had a shorter lifespan (median 301 days vs. 848 days) and a higher mortality within the first year postadmission (54 vs. 37%), were less likely to receive expensive treatments, and were more frequently housed off‐exhibit. On an average, parrots were found to have a short postadmission lifespan (median 356 days), with 92.5% of the birds dying within their first five years in captivity. The paper discusses the difficult dilemmas these incoming traffic‐related animals pose to zoo management and official anti‐traffic policies. Zoo Biol 29:600–614, 2010. © 2010 Wiley‐Liss, Inc.     

Fouling of fishing line by the waterflea <Emphasis Type="Italic">Cercopagis pengoi</Emphasis>: a mechanism of human-mediated dispersal of zooplankton?

The fishhook waterflea Cercopagis pengoi was first reported in Lake Ontario in 1998, but subsequently spread to Lakes Michigan and Erie as well as some inland lakes. One possible mechanism of dispersal to inland lakes occurs via fouling of and subsequent transfer on sport fishing lines. Here we explore fouling of Cercopagis on different commercial brands of fishing lines while trolling on Lake Ontario. Accumulation of animals varied significantly across brands, and was lowest on Flea Flicker brand. Fouling was more intense with line set at 20 than at 10 m, and was directly related to the distance trolled. Different pound-tests of Flea Flicker did not vary significantly in Cercopagis accumulation rates. The maximum number of Cercopagis and diapausing stages on a fishing line was 1024 individuals and 106 diapausing eggs. Because diapausing eggs may remain viable for weeks or longer, their transfer on fouled fishing line to non-invaded lakes poses a risk of invasion and supports previous studies that suggested sport fishermen as possible vectors of dispersal of invasive waterfleas. Handling editor: S. Dodson     

Distribution of histoplasma capsulatum in Amazonian wildlife

In a survey of 296 sylvatic animals captured from virgin forests in the north-eastern and south-western Amazon of Brazil, Histoplasma capsulatum was isolated, via the indirect hamster inoculation method, from the liver and spleen of four common opossums Didelphis marsupialis and two pacas Agouti paca. The infected animals did not show any clinical symptoms or histopathology. The known Amazonian mammalian species with natural histoplasmosis now total five, the previously reported species being the spiny rat Proechimys guyannensis, the two-toed sloth Choloepus didactylus and the nine-banded armadillo Dasypus novemcinctus.     

渔场重心信度测算及渔场重心修正理论构建——以闽南-台湾浅滩渔场二长棘鲷为例

渔场重心是表征渔场位置的重要参数,准确掌握渔场重心,对判断鱼类洄游路线、确定中心渔场、表征鱼群分布特征和变化规律具有重要意义。渔场重心计算采用的是固定物体重心计算方法,然而运动的鱼类和固定物体有着本质的区别。因此,由固定物体重心计算的渔场重心能否体现鱼群分布特征,值得深入研究。渔场重心信度是用于度量由固定物体重心计算的渔场重心表征鱼群分布特征的能力,体现渔场重心的可信程度,而渔场重心修正是为了提升渔场重心表征鱼群分布特征的能力,提高渔场重心信度,以准确掌握渔场重心。以闽南-台湾浅滩渔场二长棘鲷(Parargrops edita Tanaka)为例,采用渔场重心、几何中心和单位捕捞努力量渔获量(Catch Per Unit Effort,CPUE)为参数,首次建立了渔场重心信度测算及渔场重心修正理论和方法,分析了渔场重心信度,研究了渔场重心修正方法和渔场重心的分布特征,旨在从更精细地水平上掌握二长棘鲷渔场重心,为生态智慧在渔业资源开发和管理的应用提供可靠的数据支持。结果表明:(1)二长棘鲷渔场重心信度各月变化在0.12—1.00,平均值0.67,均方差0.31,各月渔场重心可信度波动较大,12月份和2月份渔场重心信度最大为1.00,鱼群对称和均匀分布于渔场重心,渔场重心可信度最高,3—8月份渔场重心信度低于0.70,鱼群在渔场重心周围的对称性和均匀度差,渔场重心可信度差,其中3月份渔场重心信度最小为0.12;(2)渔场重心信度不仅反映了渔场重心可信程度,还体现了鱼群在渔场重心周围的分布特征,可作为研究鱼群分布特征的重要参数,渔场重心信度低于0.70,渔场重心需要修正;(3)渔区修正系数用于判别鱼群所在渔区是否排除,通过去除渔区修正系数小于0.5的鱼群,能保留85%以上的鱼群数量,提高渔场重心信度0.70以上;(4)修改后的渔场重心变化规律较显著,4—5月份,幼鱼群体重心向西迁移,6—7月份,索饵群体重心向东北方向移动,8月份,索饵群体重心开始往南迁移,9—11月份,越冬群体重心逐渐向南移动,12月份,生殖群体重心继续往南迁移,1—3月份生殖群体主要集中在305渔区(119°15'E,23°15'N)附近进行生殖活动,鱼群少有迁移。     

Hook selectivity and catch efficiency in two sport fishing sectors in the Strait of Istanbul,Turkey: Classic handline fishing and Light Rock Fishing (LRF)

In this study, the efficiency of two fishing methods (a) traditional handline commonly used in the Strait of Istanbul and (b) light rock fishing (LRF), which is beginning to spread in recent years, were investigated by monthly sampling between September 2014 and September 2015. One classic handline fishing tackle and one LRF fishing tackle were used in the test fishing exercise. In addition, the effects of the hook sizes (numbers 6, 8 and 10) used in the handline fishery on the size selectivity for horse mackerels were also studied. Catches using both types of fishing gear were mainly composed of Trachurus mediterraneus (89.60%), Scorpeana porcus (5.12%), Sardina pilchardus (1.98%), Atherina boyeri (0.99%), Liza aurata (0.66%), Scorpaena scrofa (0.50%), Pomatomus saltatrix (0.33%), Sprattus sprattus (0.33%) and a few other species. The frequency distributions of horse mackerel caught using handlines and LRF were slightly different and ranged between 6.1–19.0 cm and 9.0–16.0 cm, respectively. Of all the handlines, LRF yielded the highest catch per unit effort (CPUE), 1.295 kg/10 hooks/hour. The log normal model selectivity curve gave the best fit for the T. mediterraneus by using the SELECT method. The modal lengths of horse mackerel caught by handline hook sizes no.10 and no. 8 hook were calculated as 13.4 cm and 17.7 cm, respectively. In addition, the spread values were determined with 3.58 and 4.74, respectively.     

Historical dynamics of Batrachochytrium dendrobatidis in Amazonia

The Amazon forest is known for its astonishing amphibian diversity, yet the potential distribution and underlying impacts of the most important amphibian pathogen is unknown for most of Amazonia. In this retrospective survey of preserved Leptodactylus frogs, collected over a 119 yr period, we used quantitative PCR to detect the fungal pathogen Batrachochytrium dendrobatidis (Bd) and performed spatial scan analyses to identify spatiotemporal clusters of Bd. We also quantified the potential effect of environmental factors on the likelihood of Bd occurrence and generated an updated suitability map for Bd in the Amazon that included our retrospective sampling. We detected Bd in lowland Amazon as early as 1935, in the state of Pará, Brazil, and we found low prevalence (～ 3.8%) over time. We identified two statistically significant spatiotemporal clusters of Bd: a recent and narrow cluster in the Amazon River delta and a spatiotemporally broad cluster in the southern edge of Amazon and Brazilian savanna. Furthermore, we found an increase in Bd‐positive samples in the southwestern Amazon after the 1990s, coinciding with reported amphibian declines in neighboring high elevation sites on Andean slopes of Peru. Spatial regressions indicated that higher human interference, higher precipitation, and lower temperatures were significant predictors of Bd occurrence. Environmental niche modeling predicted some narrow areas of suitable climates along the Amazon's periphery and generally low climatic suitability for Bd in the central Amazon; although, we found clusters of Bd‐positive samples with unexpectedly high infection loads in areas of predicted low suitability. Our study indicates that accelerated human development may put Amazonian amphibians at risk from Bd introductions, and it highlights the potential need to monitor Bd dynamics near Amazonian port cities.     

Multigene phylogeny reveals convergent evolution in small interstitial catfishes from the Amazon and Atlantic forests (Siluriformes: Trichomycteridae)

Interstitial trichomycterid catfishes of the Glanapteryginae and Sarcoglanidinae with uncommon morphology have been known for long time from taxa endemic to the Amazon. In most recent decades, two genera, Listrura and Microcambeva, respectively, placed in Glanapteryginae and Sarcoglanidinae on the basis of morphological characters, have been described from the Atlantic Forest of eastern South America, about 1,500 km from the area inhabited by those Amazon taxa. Herein, we first test the phylogenetic positioning of Listrura and Microcambeva using a multigene data set, including two nuclear and three mitochondrial genes for nine species of Listrura and Microcambeva and 11 species representing all closely related subfamilies (TSVSG-clade), as well as five used as outgroups. The phylogenetic analyses generated a robust tree with high support values in all nodes, where monophyly of Glanapteryginae and Sarcoglanidinae is refuted. In contrast, Listrura and Microcambeva form a highly supported clade, herein formally described as a new subfamily, sister to a clade containing taxa representing the Glanapteryginae, Sarcoglanidinae, Stegophilinae, Tridentinae and Vandelliinae. This study also indicates that Microcambeva and Listrura exhibit divergent evolutionary trends in ecological and morphological attributes. Species of Microcambeva inhabit patches of loose sand and possess morphological traits that were convergently acquired by Amazon sand-dwelling sarcoglanidines, including loss of body pigmentation and long maxilla. Species of Listrura live burrowed inside small stretches of dense leaf litter and have morphological traits that were convergently acquired by Amazon glanapterygines inhabiting leaf litter bottom rivers, including elongate body, with numerous vertebrae and loss or reduction of all fins.     

Livelihood activities and land-use at a riparian frontier of the Brazilian Amazon: quantitative characterization and qualitative insights into the influence of knowledge,values, and beliefs

We examined if smallholders that immigrated to the Amazon over the last 40 years (highway-era families) and households with historical ties to the region (rubber-era families) adopt different livelihood activities and land-use/land-cover (LULC) patterns, in four communities along the Tapajós River in the Brazilian Amazon. Using quantitative data, we characterized three portfolios of livelihood activities, each associated to different LULC. Both rubber-era and highway-era families practice a wide range of activities from all portfolios; however, families that have been in the region for several generations tend to adopt traditional activities (e.g., fishing, non-timber forest product gathering and sales), while recently settled families tend to practice agrarian activities more intensively (e.g., cattle ranching, sale of non-native crops). We then draw on qualitative data to examine some of the underlying reasons for these differences. While recognizing that livelihoods are complex systems with many influential factors, we reflect on some of the overlooked drivers of livelihood and LULC choices such as knowledge, visions of development, and the immaterial value and symbolic meaning of resources. We also reflect on how they shape intended land management choices and relate to household settlement histories. The implications for regional resource-use planning and future research are mentioned.     

Flooding effects on abundance of an exploited,long-lived fish population in river-floodplains of the Amazon

Flooding regulates the amount and quality of habitat available for fish populations in river-floodplains. Although previous studies assessed fish population responses to river hydrology, the processes by which flooding affects fish abundance and catch remain unclear. Here, we investigated whether degree of flooding affects abundance and catch of Colossoma macropomum, a long-lived, overexploited fish population of the central Amazon Basin. We computed the degree of flooding corresponding to the feeding area of young-of-the-year C. macropomum as the annual magnitude of the moving littoral zone (ML). We estimated abundance of age classes one, two, and three of C. macropomum using a modeling program based on catch, fishing effort, and fish length frequency data from the principal commercial fishery. We found that flooding positively and non-linearly affected abundance of the age-one cohort but not of older age classes. ML data corresponding to a late rising water phase in which zooplankton, seeds, and fruits dominated the diet provided the strongest effect on age-one abundance. However, flooding effects on total catch were not found, likely due to catches comprising several age classes. These results provide support to existing evidence that the magnitude of the moving littoral zone regulates abundance of juvenile fish. Because the ML quantifies food and habitat availability for various other fish species, it may constitute an important control of fish abundance in these systems. Management of these fisheries may be improved by adjusting fishing effort based on hydrology. More generally, the information also serves to assess the impacts of hydrological alterations (e.g., dams) on fish recruitment.

     

Are you more than the sum of your parents’ genes? Phenotypic plasticity in a clonal vertebrate and F1 hybrids of its parental species

All known vertebrate clones have originated from hybridization events and some have produced distinct evolutionary lineages via hybrid speciation. Amazon mollies (Poecilia formosa) present an excellent study system to investigate how clonal species have adapted to heterogeneous environments because they are the product of a single hybridization event between male sailfin mollies (Poecilia latipinna) and female Atlantic mollies (Poecilia mexicana). Here, we ask whether the hybrid species differs from the combination of its parental species’ genes in its plastic response to different environments. Using a three-way factorial design, we exposed neonates produced by Amazon mollies and reciprocal F1 hybrid crosses to different thermal (24°C and 29°C) and salinity (0/2, 12, and 20 ppt) regimes. We measured various ontogenetic and life history characteristics across the life span of females. Our major results were as follows: (1) Reaction norms of growth and maturation to temperature and salinity are quite similar between the two hybrid crosses; (2) Amazon molly reaction norms were qualitatively different than the P. latipinna male and P. mexicana female (L×M) hybrids for the ontogenetic variables; (3) Amazon molly reaction norms in reproductive traits were also quite different from L×M hybrids; and (4) The reaction norms of net fertility were very different between Amazon mollies and L×M hybrids. We conclude that best locale for Amazon mollies is not the best locale for hybrids, which suggests that Amazon mollies are not just an unmodified mix of parental genes but instead have adapted to the variable environments in which they are found. Hybridization resulting in asexuality may represent an underappreciated mechanism of speciation because the unlikely events required to produce such hybrids rarely occur and is dependent upon the genetic distance between parental species.     

Key problems in the management of sports fisheries

Abstract

This article discusses issues associated with valuation of sports fishing activities for marine resource management. Since management decisions have effects on marine resource quality and activity levels of different groups of resource users, careful benefit‐cost evaluation of alternative management plans is essential to implement an efficient management system. Three important issues for measuring sports fishing benefits are discussed: (1) aspects of fishing experience enjoyed by recreationists, (2) congestion, and (3) recreational inputs purchased for fishing participation. The household production function framework is discussed as a plausible approach to incorporate a variety of recreational inputs for describing sports fishing demand. Throughout the article, data deficiency is emphasized. Individual microlevel data about recreationists’ socioeconomic characteristics and expenditures as well as fishing site quality variables are necessary to improve the sports fishing valuation task.