Genetic Polymorphism and Transplantation Success in the Mediterranean Seagrass Posidonia oceanica

We studied the role of genetic variability of donor beds in establishing transplantation criteria for the Mediterranean seagrass Posidonia oceanica. Horizontal rhizomes, collected from three geographically distinct populations, were transplanted into a common bed at a highly human‐impacted locality. The transplantation site was located near one of the donor populations. After three years, the shoots collected in the population adjacent to the transplanting site showed the lowest growth performance. Genetic variability, assessed through the analysis of hypervariable microsatellite regions, and growth performance followed a similar trend. The shoots growing and branching at the highest rate were those collected from populations with the highest heterozygosity values, despite greater geographic distance. No genetic differences were found between the transplanted shoots and shoots from donor meadows, as expected due to the low rate of sexual reproduction in P. oceanica and the short time that had passed since the transplants. The problem of affecting the local gene pool by the introduction of foreign genotypes could arise, but introduction of new alleles could balance the degradation of genetic variability caused by human impact. In general our study suggests that the genetic variability of source material is an important aspect to consider in the development of seagrass restoration strategies.     

Functional uniformity underlies the common spatial structure of macrofaunal assemblages in intertidal seagrass beds

Previous work has shown that the intertidal seagrass macrobenthos at three geographically and ecologically disparate localities (in the north‐east Atlantic, south‐west Indian and south‐west Pacific Oceans) possess similar relative species occurrence distributions and uniform species densities. These common features are here demonstrated to be related to the presence in those assemblages of: (1) similar functional diversities and evennesses, (2) the same set of dominant component functional groups, and (3) similar ranked relative occurrence distributions both of those groups and of the component genera within each of the larger groups. The two lower‐latitude systems were particularly similar in all these respects. Although sharing the same subset of individual functional groups, however, the relative importance of members of that subset varied from locality to locality and even within a single locality, whilst still maintaining the same ranked relative functional‐group occurrence distribution. Therefore the broad structure of available macrobenthic functional roles and the relative occurrences of the component taxa in intertidal seagrass beds (and hence, granted stochastic assembly, the total numbers of taxa supported by unit area) are likely to be linked causally, although the form of the relationship is unclear. © 2015 The Linnean Society of London, Biological Journal of the Linnean Society, 2015, 115 , 114–126.     

黄渤海海草分布区日本鳗草根际微生物群落结构特征及其功能分析

日本鳗草(Zostera japonica)是亚洲特有的海草种类,具有重要生态价值。近年来,黄渤海海草分布区中的日本鳗草海草床持续退化,引起了研究人员的广泛关注。【目的】基于根际微生物的分布与日本鳗草的健康生长密切相关的设想,本文旨在探究黄渤海海草分布区日本鳗草根际细菌群落结构多样性并分析其与海草健康生长的内在联系。【方法】选取黄渤海海草分布区中东营、威海、大连3个地点的日本鳗草根际与非草区表层沉积物,采用高通量测序技术(Illumina HiSeq PE300)解析根际微生物群落特征,并结合相关环境参数分析其环境功能。【结果】日本鳗草根际表层沉积物中主要存在的细菌类群有:变形菌门(Proteobacteria)所占比例为41.1%,蓝细菌门(Cyanobacteria)占15.4%,拟杆菌门(Bacteroidetes)占12.6%,放线菌门(Actinobacteria)占9.3%。不同地点之间以及样品类型(海草床根际与非根际)之间的微生物群落存在显著差异,主要表现为根际富含硫酸盐还原菌和固氮菌。环境因素:TN (total nitrogen)、TC (total carbon)、TOC (total organic carbon)、黏土(Clay)、砷(As)与根际群落组成与分布显著相关。【结论】从功能的角度来看,不同地点、不同样品类型之间的差异物种多与硫、氮代谢相关,硫酸盐还原菌对维持日本鳗草的生态健康起关键作用;日本鳗草根际微生物群落分布与环境因子、空间分布有一定相关性。     

Spatial patterns of genetic diversity in Posidonia oceanica, an endemic Mediterranean seagrass

Posidonia oceanica is an endemic seagrass species in the Mediterranean Sea. In order to assess levels of genetic structure in this species, the microsatellite polymorphism was analysed from meadows collected in several localities, along the coasts of the Tyrrhenian Sea (Mediterranean Sea). The existence of single population units and the recruitment of seedlings collected in some localities were investigated. Moreover, genetic structure at different spatial scales and biogeographic relationships among populations were also assessed. Our analysis showed the existence of clear patterns of genetic structure in P. oceanica in the area considered in the analysis. P. oceanica, in fact, is present in separate meadows that represent discrete populations, characterized by low genetic diversity. Comparable levels of genetic variability between mature meadows and seedlings were found. Patterns of genetic relatedness among populations seem to be in accord with direction of dominant current flux in the whole area, separating South Tyrrhenian from North Tyrrhenian populations. Moderate levels of gene flow between populations and genetic substructure within populations, together with the finding of the limited role of sexual reproduction in increasing genetic variability, should be a cause for concern for the persistence of this essential resource in the Mediterranean basin.     

Effects of a marine protected area on fish assemblage associated with Posidonia oceanica seagrass beds: temporal and depth variations

This study describes the changes in the structure of the fish assemblage associated with Posidonia oceanica meadows after the establishment of a marine protected area. The survey of the ichthyofauna in the Marine Reserve of Tabarca Island was carried out by visual censuses with SCUBA. Inside and outside the reserve was sampled six times at random from summer 1997 to summer 1999 and in three different depths (1, 5 and 15 m) by applying transects of 150 × 5 m over the P. oceanica meadows. The data were analyzed with multivariant methodologies and with analysis of variance. The most represented families in number of species were the sparids and labrids. Mean abundance, biomass and number of species were higher inside the reserve in all studied periods. Inside the marine protected area, these variables decreased as depth increased; outside the protected area the pattern was the opposite, reaching the maximum at 15 m.     

Parasitic wasp assemblages associated with native and weedy plant species in an agricultural landscape

Abstract  The establishment and maintenance of suitable habitat on-farm or in the surrounding landscape can enhance the survival of beneficial parasitic Hymenoptera, thus improving the control of pest species. Both endemic and weedy non-crop plant species across a highly modified agricultural landscape supported species-rich and abundant parasitic wasp assemblages with diverse biology and host associations. It was also shown that isolated, recently planted, single-species stands of plants can rapidly accumulate diverse assemblages of parasitoids. Chalcidoidea was the most species-rich and abundant group, egg and larval parasitoids were the most speciose and abundant guilds, and parasitoids of herbivorous insects feeding on and inside plant tissue were the most species-rich and abundant functional groups. The hymenopteran assemblages associated with the majority of plant species were dominated by three parasitoid species: a Trichogrammatidae, a Scelionidae ( Telenomus sp.) and a Eulophidae ( Ceranisus sp.), all genera that contain many important biocontrol agents of pest Lepidoptera, Hemiptera and Thysanoptera. Results show that both native and weedy plant species may potentially provide an important reservoir of mobile parasitic wasps of benefit to crop protection.     

Anthesis effects on Posidonia oceanica (L.) Delile phenology in the Bay of Calvi (Corsica,Mediterranean Sea)

In Posidonia oceanica (L.) Delile, anthesis induces a decrease in the number of juvenile leaves resulting in a significant reduction in the number of leaves on the flowering shoots. All the leaves of the flowering shoots are narrower than the leaves of nonflowering shoots. A modification of the leaf growth also appears in flowering shoots: the oldest leaves are longer and the leaves induced during or after anthesis are shorter. At 10 m depth, in the Bay of Calvi, anthesis lasts roughly 3 months and the flowering is induced 7 months before anthesis.     

Diversity,ecological role and potential biotechnological applications of marine fungi associated to the seagrass Posidonia oceanica

The marine environment is characterized by high salinity and exerts a strong selective pressure on the biota, favouring the development of halo-tolerant microorganisms. Part of this microbial diversity is made up of fungi, important organisms from ecological and biotechnological points of view. In this study, for the first time, the qualitative and quantitative composition of the mycoflora associated to leaves, rhizomes, roots and matte of the seagrass Posidonia oceanica was estimated. A total of 88 fungal taxa, mainly belonging to Ascomycota, were identified by morphological and molecular methods. The most represented genera were Penicillium, Cladosporium and Acremonium. Most of the species (70) were selectively associated with one district; only two species (Penicillium chrysogenum var. chrysogenum and P. janczewskii) were isolated from all the districts. Moreover the capability to produce laccases, peroxidases and tannases by 107 fungal isolated by the different districts of P. oceanica was carried out. These results show that the mycoflora associated to P. oceanica is very rich and characterized by fungi able to produce ligninolytic enzymes and tannases useful to degrade and detoxify lignocellulose residues in presence of high salt concentrations. These fungi, hence, may play important ecological roles in marine environments but can also be very useful in different biotechnological areas.     

Intercontinental trends in functional and phylogenetic structure of stream fish assemblages

Understanding of community assembly has been improved by phylogenetic and trait‐based approaches, yet there is little consensus regarding the relative importance of alternative mechanisms and few studies have been done at large geographic and phylogenetic scales. Here, we use phylogenetic and trait dispersion approaches to determine the relative contribution of limiting similarity and environmental filtering to community assembly of stream fishes at an intercontinental scale. We sampled stream fishes from five zoogeographic regions. Analysis of traits associated with habitat use, feeding, or both resulted in more occurrences of trait underdispersion than overdispersion regardless of spatial scale or species pool. Our results suggest that environmental filtering and, to a lesser extent, species interactions were important mechanisms of community assembly for fishes inhabiting small, low‐gradient streams in all five regions. However, a large proportion of the trait dispersion values were no different from random. This suggests that stochastic factors or opposing assembly mechanisms also influenced stream fish assemblages and their trait dispersion patterns. Local assemblages tended to have lower functional diversity in microhabitats with high water velocity, shallow water depth, and homogeneous substrates lacking structural complexity, lending support for the stress‐dominance hypothesis. A high prevalence of functional underdispersion coupled with phylogenetic underdispersion could reflect phylogenetic niche conservatism and/or stabilizing selection. These findings imply that environmental filtering of stream fish assemblages is not only deterministic, but also influences assemblage structure in a fairly consistent manner worldwide.     

Diversity of juvenile fish assemblages in the pelagic waters of Lebanon (eastern Mediterranean)

Oxygen consumption rates of nauplii of the brine shrimp Artemia franciscana Kellogg 1906 were determined over a range of salinities from 10 to 110 ppm, in temperatures from 0 to 30°C, using a multi-factorial design. The oxygen micro-sensors employed have a fast response time and are capable of accurately measuring oxygen concentrations at temperatures well below 0°C. Oxygen uptake rate ranged from 0.03 to 0.66 μmol O₂ mg⁻¹ h⁻¹ and was sensitive to changes in both salinity and temperature. Temperature was the dominant factor affecting oxygen consumption rates, which showed a significant increase with increasing temperature. A slight decrease was measured in oxygen consumption with increasing salinity related to differential solubility of oxygen in waters of different salinities. Thermal sensitivity of oxygen consumption determined from calculations of Q ₁₀, indicated physiological adaptation of Artemia nauplii to the ranges of temperatures tested. Handling editor: A. van Kerchove     

Effects of Dredging Activities on Population Dynamics of Posidonia oceanica (L.) Delile in the Mediterranean Sea: The Case Study of Capo Feto (SW Sicily, Italy)

Between 1981 and 1993 a methane pipeline was deployed between Sicily (Italy) and Tunisia. This involved the construction of a pipeline trench, which damaged the Posidonia oceanica (L.) Delile meadow at Capo Feto (SW Sicily, Italy) and disturbed the surrounding meadow. Seagrass growth and population dynamics were examined at different depth ranges and at increasing distances from the construction site outer limit (5, 15, 30, 50 m). Results showed significant differences between the shallow (10±3.3 m) and the deep (20±4.6 m) meadow as well as differences among distances. The age structure of P. oceanica varied along the distance gradient and with depth. The mortality rate decreased with distance from the trench at all depth ranges, showing that the plants close to the excavation suffered a higher level of disturbance. Turnover and annual gross shoot recruitment rate (R_gross) were higher in the shallow portion of the meadow than in the deep range. Forecast of future meadow development (R_net) close to the trench indicates that, if present conditions are maintained, shoot density will be reduced by 50% over the next 6 to 17 yrs.     

Species number, species abundance and body length of arboreal arthropods associated with an Australian rainforest tree

Abstract.

• 1 The species number, the abundance per species and the body length of arthropods foraging within the crowns of an over-storey rainforest tree from Australia, Argyrodendron actinophyllum (Sterculiaceae), were investigated by interception trap sampling and restricted canopy fogging. Emphasis was placed upon the interpretation of trap data. Arthropods were trapped continuously day and night, over a 2-year period and the final analyses examined the attributes of 759 species which represented 20,500 individuals.
• 2 The proportion of‘rare’species (Le. collected once) intercepted was high (35.7%), although lower than in other similar rainforest surveys. Neither the α log-series nor the log-normal distribution could be fitted to the relationship between number of species and number of individuals, since the number of rare species was much higher than predicted and the mode of the distribution could not be identified. The proportion of rare species was higher in fogging collections (452%) than in trap collections.
• 3 The data are compared with a study of Bornean arboreal beetles, obtained by fogging trees during a single sampling event. Several patterns were common to both data sets. However, the three-dimensional plot of the variables describing the structure of the arthropod community showed a notably rougher surface than in the case of Bornean beetles.
• 4 Although several factors may complicate the interpretation of the three-dimensional plots, long-term and continuous sampling may alter our perception of complex arthropod communities. This methodology is imperative for a proper understanding of arthropod community structure in rain forests.

     

Changes in fish assemblages in catchments in north‐eastern Spain: biodiversity,conservation status and introduced species

1. North‐eastern Spain is a hot spot for the introduction of alien fish species, and its native fish fauna is one of the most endangered worldwide. We used an extensive data set from 2002 to 2003 and historical information from the area to characterize fish diversity and establish conservation priorities in river catchments. 2. Diversity indices were used to characterize fish diversity at the basin scale. An index of conservation status was applied for each species, which considers the occurrence, abundance and endemicity of each taxon. We used indirect ordination methods to test the relationship among basin features and to identify those variables most correlated with each other. To identify physical, biotic and environmental characteristics that seem to make a basin particularly susceptible to invasion, we performed a step‐wise multiple regression to examine the relationship between the number of native, translocated and introduced fish species (including the original native species richness of each basin), and landscape variables. 3. Over a period of approximately 50 years, the mean range size of native fish species has decreased by 60%. The greatest decline occurred in Gasterosteus gymnurus, Anguilla anguilla and Salaria fluviatilis, for which species over 75% of the original distribution area has been lost. The species with the highest conservation index were Gasterosteus gymnurus and Salaria fluviatilis. 4. Basin area and the catchment type explained 70% of variation in native species richness, whereas the number of dams and basin area accounted for more than 80% of variation in the number of introduced species. 5. The original native species richness and the number of introduced species at basin scale were not related, and thus there was no evidence of “biotic resistance” to invasion. The restoration of natural hydrologic processes and the development of specific management tools to protect native species, such as the prioritization of areas for fish conservation and the eradication of local populations of exotic species, are required to restore native fish fauna in these catchments.     

Diversity of fish species assemblages distributed in the drainage area of Lake Balaton (Hungary)

Hydrobiologia - Varying habitats of northern and southern inflows running into Lake Balaton provide appropriate living conditions for numerous fish species. Inflowing canals, creeks, and rivulets...     

Changes of taxonomic and trophic structure of fish assemblages along an environmental gradient in the Upper Beni watershed (Bolivia)

The distribution and the diet of 28 fish species were evaluated, during the dry season, in 12 streams of the Upper Beni watershed (Amazon basin, Bolivia). The 12 streams were of similar size (stream width and water depth) but situated on a gradient of altitude in the Andean and sub‐Andean areas. The environmental conditions in the stream changed in relation to the altitude. As altitude decreased, slope and water velocity also decreased, while temperature, conductivity, pH and the proportion of pools increased. Although the diets of the species were mainly based on two aquatic autochthonous food resources, invertebrates and sediment, species were classified into five trophic guilds: detritivores, algivores, piscivores, invertivores‐omnivores and aquatic specialist invertivores. In all streams invertivores dominated or co‐dominated with detritivores. The trophic structure of the assemblages, however, changed in relation to the environmental gradient. The fish species richness increased and the trophic composition became more diverse at lower altitudes, when slope decreased and temperature increased. At the same time, the relative number of invertivore species decreased, whereas the relative number of detritivore, algivore and piscivore species increased. Decreasing altitude appeared to play a role similar to increasing stream size along the longitudinal gradient. This could be explained by geomorphological and temperature variations that may generate environmental conditions favourable to an increase of productivity.     

Depth and temporal distribution of vagile fauna associated with Posidonia oceanica meadows in Cap Zebib,north‐eastern Tunisian coastline

A study on plant features and motile fauna was carried out within a Posidonia oceanica (L.) Delile bed in Cap Zebib (north‐eastern Tunisian coastline). Fauna was sampled in two stations located at 3 and 12 m depth. A total of 154 species represented by 5592 individuals were collected. Taxa with the highest number of species included Crustacea (22), Mollusca (47) and Polychaeta (46). Among Crustacea, Leptocheirus pilosus, Elasmopus rapax and Lysianassa longicornis were recorded for the first time in Tunisian P. oceanica meadows. The species richness was found to be generally higher at the shallow station. Multivariate analyses showed a pronounced temporal variation in collected populations’ structure. Moreover, the distribution of some groups, in particular molluscs and crustaceans, appeared to be mainly influenced by ‘depth’ factor showing a clear zonation pattern for some species. It was also showed with Spearman test that the faunal features of the two latter taxa (molluscs and crustaceans) are related with the shoot density and Leaf Area Index. However, no correlation was found between the plant parameters and polychaetes community characteristics. In addition, environmental factors, i.e. temperature and dissolved oxygen were found to be correlated with species richness and Shannon–Wiener diversity for each zoological group.     

Effects of habitat,wave exposure,and marine protected area status on coral reef fish assemblages in the Hawaiian archipelago

The relationships between fish assemblages, their associated habitat, and degree of protection from fishing were evaluated over a broad spatial scale throughout the main Hawaiian islands. Most fish assemblage characteristics showed positive responses to protection whether it was physical (e.g. habitat complexity), biological (e.g. coral cover growth forms), or human-induced (e.g. marine reserves). Fish biomass was lowest in areas of direct wave exposure and highest in areas partially sheltered from swells. Higher values for fish species richness, number of individuals, biomass, and diversity were observed in locations with higher substrate complexity. Areas completely protected from fishing had distinct fish assemblages with higher standing stock and diversity than areas where fishing was permitted or areas that were partially protected from fishing. Locations influenced by customary stewardship harbored fish biomass that was equal to or greater than that of no-take protected areas. Marine protected areas in the main Hawaiian islands with high habitat complexity, moderate wave disturbance, a high percentage of branching and/or lobate coral coupled with legal protection from fishing pressure had higher values for most fish assemblage characteristics.     

Geographic, seasonal and bathymetric distribution of demersal fish species in the eastern Mediterranean

The distributional abundance of three demersal fish species, Merluccius merluccius, Mullus barbatus and Lophius budegassa, was studied as a function of sampling season, bathymetry and geographic area. Data were collected during research trawl surveys in the Aegean and Ionian seas under the same sampling scheme, thereby allowing comparisons to be made on the mean regional densities in numbers and biomass of these three commercially important species in Greek waters. Results indicated that European hake, M. merluccius, demonstrated a wide bathymetric and geographic distribution, with specimens encountered in all regions between 20 and 500 m depth, although density was found to be highest usually between 101 and 200 m. The mean regional density of hake was observed to vary seasonally, being higher mainly in winter. Red mullet, M. barbatus, was distributed in shallow water depths (<100 m) throughout the Greek seas, particularly in the northern part of the Aegean Sea. Abundance of this species steadily decreased with increasing depth. The geographic distribution of anglerfish, L. budegassa, was found to be restricted to the central and northern part of the Aegean Sea, with the highest mean densities encountered in the Thermaikos Gulf and in intermediate water depths between 101 and 200 m. Spatial patterns of observed density are assumed to be attributed mainly to prevailing topographic and hydrographic conditions and related biological productivity levels.     

Community structure of deep-sea demersal fish in the North Aegean Sea (northeastern Mediterranean)

The spatial structure and seasonal changes of the demersal fish assemblages on the continental shelf (100–200 m) and upper slope (200–500 m) in the North Aegean Sea (Northern Aegean and Thracian Seas, northeastern Mediterranean, Greece) were analysed. Seasonal experimental trawl surveys, carried out from summer 1990 to autumn 1993, provided a total of 151 demersal fish species. Analysis of 259 bottom trawls showed the existence of four groups associated with the continental shelf and the upper slope; each group was dominated by a small number of species. The bathymetric distribution of the species, established using measures of the centre of gravity and habitat width, revealed that most of the species had a wide distributional range within the study area, although a few were restricted to the greatest depths. Density, biomass, species richness and diversity decreased significantly with depth, and were also indicative of distinctive characteristics between these fish assemblages. Mean fish weight exhibited two different trends: a bigger-deeper phenomenon at the continental shelf and a smaller-deeper phenomenon at the upper slope. The variability in assemblage structure was determined mainly by depth and, to a lesser extent, by season and geographical location. For some species, results suggest a pattern of gradual species replacement along the depth gradient coupled with ontogenetic habitat shifts.