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Aim To investigate the phylogeographic patterns among populations of the wide‐ranging velvet ant Sphaeropthalma arota to (1) examine the biogeographic patterns within this species, and (2) associate major genetic divergences to historical vicariance events in order to gain insight into the processes that drove diversification in arid‐adapted organisms. Location Western North America. Methods Phylogenetic relationships were determined by analysing the two ribosomal DNA internal transcribed spacers (ITS1 and ITS2) in Mr Bayes . Divergence dates were estimated for major nodes using two different molecular dating analyses: a penalized likelihood approach to rate smoothing using the program r8s , and a Bayesian MCMC averaging approach to rate smoothing using the program beast . Both analyses were calibrated using fossils from Dominican amber. Haplotype networks were estimated using tcs . Ecological niche models (ENMs) were developed using six bioclimatic variables from the WorldClim data set in the program Maxent . Results The phylogenetic reconstructions indicate that S. arota can be split into four deeply divergent lineages that probably represent distinct species. No morphological characters were found that can be used to identify these four species, making the S. arota species complex the first documented cryptic species complex in the family Mutillidae. Ecological niche models provide estimated distributions, which indicate that each of the four species inhabits a distinct niche. Divergence date estimates suggest that major diversification events occurred in the late Neogene. Main conclusions Sphaeropthalma arota is composed of four genetically distinct species that cannot be distinguished morphologically based on current methods. We suggest that the members of this group be identified as the S. arota species complex. Major diversification events in this species complex can be linked to late Neogene mountain building and aridification events, specifically the uplift of the mountain ranges in southern California and the expansion of the Bouse Sea.  相似文献   

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The last Pleistocene deglaciation shaped temperate and boreal communities in North America. Rapid northward expansion into high latitudes created distinctive spatial genetic patterns within species that include closely related groups of populations that are now widely spread across latitudes, while longitudinally adjacent populations, especially those near the southern periphery, often are distinctive due to long‐term disjunction. Across a spatial expanse that includes both recently colonized and long‐occupied regions, we analysed molecular variation in zapodid rodents to explore how past climate shifts influenced diversification in this group. By combining molecular analyses with species distribution modelling and tests of ecological interchangeability, we show that the lineage including the Preble's meadow jumping mouse (Zapus hudsonius preblei), a US federally listed taxon of conservation concern, is not restricted to the southern Rocky Mountains. Rather, populations along the Front Range are part of a single lineage that is ecologically indistinct and extends to the far north. Of the 21 lineages identified, this Northern lineage has the largest geographical range and low measures of intralineage genetic differentiation, consistent with recent northward expansion. Comprehensive sampling combined with coalescent‐based analyses and niche modelling leads to a radically different view of geographical structure within jumping mice and indicates the need to re‐evaluate their taxonomy and management. This analysis highlights a premise in conservation biology that biogeographical history should play a central role in establishing conservation priorities.  相似文献   

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Abstract. 1. While a growing number of studies have been published investigating the history of diversification of desert‐adapted taxa, little work has been done on the history of diversification of Mediterranean‐adapted and related desert‐adapted species. Here, we investigate the historical biogeographical patterns within and among species of the Sphaeropthalma unicolor species‐complex (Hymenoptera: Mutillidae) to determine if the diversification leading to the close relationship between the desert‐adapted and Mediterranean‐adapted species resulted from late Neogene uplift events or Pleistocene climatic fluctuations. 2. Phylogenetic reconstructions showed each of the three species in the S. unicolor species‐complex forming a distinct, well‐supported clade with little population‐level structuring within the Mediterranean‐adapted S. unicolor (Cresson) and more structuring among desert‐adapted Sphaeropthalma mendica (Blake) populations. Molecular dating analyses indicated the split between Sphaeropthalma angulifera and the other two species occurring in the late Neogene and the split between S. unicolor and S. mendica occurring in the early Pleistocene. Ecological Niche Models projected onto Pleistocene climate surfaces indicated that the glacial and interglacial periods caused expansion and contraction of suitable habitat for each species. 3. Both late Neogene and early Pleistocene events were influential in the diversification of the S. unicolor species‐complex, but Pleistocene climatic fluctuations seem to have been responsible for the split between the Mediterranean‐adapted species and the desert‐adapted species. While the majority of species‐level diversification events in arid‐adapted taxa seem to have been driven by Neogene vicariant events, Pleistocene climatic changes apparently did drive diversification in some taxa.  相似文献   

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We investigated the biogeographic history of antelope squirrels, genus Ammospermophilus, which are widely distributed across the deserts and other arid lands of western North America. We combined range‐wide sampling of all currently recognized species of Ammospermophilus with a multilocus data set to infer phylogenetic relationships. We then estimated divergence times within identified clades of Ammospermophilus using fossil‐calibrated and rate‐calibrated molecular clocks. Lastly, we explored generalized distributional changes of Ammospermophilus since the last glacial maximum using species distribution models, and assessed responses to Quaternary climate change by generating demographic parameter estimates for the three wide‐ranging clades of A. leucurus. From our phylogenetic estimates we inferred strong phylogeographic structure within Ammospermophilus and the presence of three well‐supported major clades. Initial patterns of historical divergence were coincident with dynamic alterations in the landscape of western North America, and the formation of regional deserts during the Late Miocene and Pliocene. Species distribution models and demographic parameter estimates revealed patterns of recent population expansion in response to glacial retreat. When combined with evidence from co‐distributed taxa, the historical biogeography of Ammospermophilus provides additional insight into the mechanisms that impacted diversification of arid‐adapted taxa across the arid lands of western North America. We propose species recognition of populations of the southern Baja California peninsula to best represent our current understanding of evolutionary relationships among genetic units of Ammospermophilus. © 2013 The Linnean Society of London, Biological Journal of the Linnean Society, 2013, 109 , 949–967.  相似文献   

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Accurate species distribution data across remote and extensive geographical areas are difficult to obtain. Here, we use bioclimatic envelope models to determine climatic constraints on the distribution of the migratory Saker Falcon Falco cherrug to identify areas in data-deficient regions that may contain unidentified populations. Sakers live at low densities across large ranges in remote regions, making distribution status difficult to assess. Using presence-background data and eight bioclimatic variables within a species distribution modelling framework, we applied MaxEnt to construct models for both breeding and wintering ranges. Occurrence data were spatially filtered and climatic variables tested for multicollinearity before selecting best fit models using the Akaike information criterion by tuning MaxEnt parameters. Model predictive performance tested using the continuous Boyce index (B) was high for both breeding (BTEST = 0.921) and wintering models (BTEST = 0.735), with low omission rates and minimal overfitting. The Saker climatic niche was defined by precipitation in the warmest quarter in the breeding range model, and mean temperature in the wettest quarter in the wintering range model. Our models accurately predicted areas of highest climate suitability and defined the climatic constraints on a wide-ranging rare species, suggesting that climate is a key determinant of Saker distribution across macro-scales. We recommend targeted population surveys for the Saker based on model predictions to areas of highest climatic suitability in key regions with distribution knowledge gaps, in particular the Qinghai-Tibet plateau in western China. Further applications of our models could identify protected areas and reintroduction sites, inform development conflicts, and assess the impact of climate change on distributions.  相似文献   

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Synopsis Multiple datasets show global maxima of marine biodiversity in the Indo–Malay–Philippines archipelago (IMPA). Analysis of distribution data for 2983 species reveals a pattern of richness on a finer scale and identifies a peak of marine biodiversity in the central Philippine Islands and a secondary peak between peninsular Malaysia and Sumatra. This pattern is repeated in diverse habitat and higher taxa classes, most rigorously for marine shore fishes, supporting geohistorical hypotheses as the most general unifying explanations. Specific predictions based on area of overlap, area of accumulation, and area of refuge hypotheses suggest that present day eastern Indonesia, or Wallacea, should be the center of marine biodiversity. Processes suggested by these three hypotheses contribute to the diversity in this region and are also a likely explanation for the secondary center of diversity. Our study indicates, however, that there is a higher concentration of species per unit area in the Philippines than anywhere in Indonesia, including Wallacea. The Philippine center of diversity is consistent with hypotheses that this area experienced numerous vicariant and island integration events and these hypotheses warrant further testing. Special attention to marine conservation efforts in the Philippines is justified because of the identification of it as an epicenter of biodiversity and evolution.  相似文献   

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Phylogeography has become a powerful approach for elucidating contemporary geographical patterns of evolutionary subdivision within species and species complexes. A recent extension of this approach is the comparison of phylogeographic patterns of multiple co-distributed taxonomic groups, or 'comparative phylogeography.' Recent comparative phylogeographic studies have revealed pervasive and previously unrecognized biogeographic patterns which suggest that vicariance has played a more important role in the historical development of modern biotic assemblages than current taxonomy would indicate. Despite the utility of comparative phylogeography for uncovering such 'cryptic vicariance', this approach has yet to be embraced by some researchers as a valuable complement to other approaches to historical biogeography. We address here some of the common misconceptions surrounding comparative phylogeography, provide an example of this approach based on the boreal mammal fauna of North America, and argue that together with other approaches, comparative phylogeography can contribute importantly to our understanding of the relationship between earth history and biotic diversification.  相似文献   

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Palaeobiogeographic reconstructions are underpinned by phylogenies, divergence times and ancestral area reconstructions, which together yield ancestral area chronograms that provide a basis for proposing and testing hypotheses of dispersal and vicariance. Methods for area coding include multi-state coding with a single character, binary coding with multiple characters and string coding. Ancestral reconstruction methods are divided into parsimony versus Bayesian/likelihood approaches. We compared nine methods for reconstructing ancestral areas for placental mammals. Ambiguous reconstructions were a problem for all methods. Important differences resulted from coding areas based on the geographical ranges of extant species versus the geographical provenance of the oldest fossil for each lineage. Africa and South America were reconstructed as the ancestral areas for Afrotheria and Xenarthra, respectively. Most methods reconstructed Eurasia as the ancestral area for Boreoeutheria, Euarchontoglires and Laurasiatheria. The coincidence of molecular dates for the separation of Afrotheria and Xenarthra at approximately 100 Ma with the plate tectonic sundering of Africa and South America hints at the importance of vicariance in the early history of Placentalia. Dispersal has also been important including the origins of Madagascar's endemic mammal fauna. Further studies will benefit from increased taxon sampling and the application of new ancestral area reconstruction methods.  相似文献   

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Dispersal and vicariant hypotheses have for decades been at odds with each other, notwithstanding the fact that both are well-established natural processes with important histories in biogeographic analyses. Despite their importance, neither dispersal nor vicariant methodologies are problem-free. The now widely used molecular techniques for generating phylogenies have provided a mechanism by which both dispersal- and vicariance-driven speciation can be better tested via the application of molecular clocks; unfortunately, substantial problems can also exist in the employment of those clocks. To begin to assess the relative roles of dispersal and vicariance in the establishment of avifaunas, especially intercontinental avifaunas, I applied a test for clocklike behavior in molecular data, as well as a program that infers ancestral areas and dispersal events, to a phylogeny of a speciose, cosmopolitan avian genus (Anthus; Motacillidae). Daughter-lineages above just 25 of 40 nodes in the Anthus phylogeny are evolving in a clocklike manner and are thus dateable by a molecular clock. Dating the applicable nodes suggests that Anthus arose nearly 7 million yr ago, probably in eastern Asia, and that between 6 and 5 million yr ago, Anthus species were present in Africa, the Palearctic, and North and South America. Speciation rates have been high throughout the Pliocene and quite low during the Pleistocene; further evidence that the Pleistocene may have had little effect in generating modern species. Intercontinental movements since 5 million yr ago have been few and largely restricted to interchange between Eurasia and Africa. Species swarms on North America, Africa, and Eurasia (but not South America or Australia) are the product of multiple invasions, rather than being solely the result of within-continent speciation. Dispersal has clearly played an important role in the distribution of this group.  相似文献   

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  1. Identification of biodiversity hot spots is necessary for developing conservation strategies. The south‐eastern U.S.A. harbours high aquatic biodiversity; however, this diversity is threatened as a result of anthropogenic activities. We report patterns of fish and mussel biodiversity, locate hotspots of diversity and endemism, and identify gaps in protection of these hotspots.
  2. Maxent was used to generate species distribution models for native fish and mussel species in river basins throughout east Texas. Stacked species distribution models were used to assess spatial patterns of biodiversity and examine the concordance between fish and mussel hotspots. A Geographic Approach to Planning analysis was used to identify areas of high conservation concern.
  3. Predicted geographical variation in species richness of mussels corresponds to patterns shown in fish; however, there was discordance among endemicity hotspots between the two taxa. Because overall endemicity was low in both groups, species richness is likely to be the more informative measure of biodiversity at these regional scales.
  4. While hotspots represent a small percentage of the study area, almost all richness and endemicity hotspots (>95%) in east Texas occur outside of protected areas. The results of this study suggest that protected areas designated based on terrestrial habitat may fail to protect aquatic biodiversity. Studies such as this provide a baseline for development of conservation and management strategies for protection of regional freshwater biodiversity, while also suggesting that designating conservation lands should include consideration of both terrestrial and aquatic biodiversity.
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Understanding the history of diversification in the North American deserts has long been a goal of biogeographers and evolutionary biologists. Although it appears that a consensus is forming regarding the patterns of diversification in the Nearctic deserts in vertebrate taxa, little work has been done exploring the historical biogeography of widespread invertebrate taxa. Before a robust model of geobiotic change in the North American deserts can be proposed, it needs to be determined whether the same historical events affected vertebrate and invertebrate taxa in the same way. We explore the phylogeographic patterns in a widespread nocturnal wasp genus Dilophotopsis using two rDNA loci, the internal transcribed spacer regions 1 and 2 (ITS1 and ITS2). We use Bayesian phylogenetic analysis and haplotype network analysis to determine whether a consistent geographic pattern exists among species and populations within Dilophotopsis. We also used molecular dating techniques to estimate divergence dates of the major phylogenetic clades. Our analyses indicates that the species‐level divergences in Dilophotopsis occurred in the Neogene, and likely were driven by mountain building during the Miocene–Pliocene boundary (approximately 5 Mya) similar to the divergences in many vertebrate taxa. The population‐level divergences within species occurred during the Pleistocene (0.1–1.8 Mya). The present study shows that similar patterns of diversification exist in vertebrate and invertebrate taxa. © 2010 The Linnean Society of London, Biological Journal of the Linnean Society, 2010, 101 , 360–375.  相似文献   

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WIKLUND, A., 1992. The genus Cynara L. (Asteraceae-Cardueae). This study includes a taxonomic revision of the genus Cynara. Eight species and four subspecies are recognized, viz. C. algarbiensis, C. auranitica, C. baetica including subsp. baetica and subsp. maroccana (formerly known as C. hystrix), C. cardunculus including subsp. cardunculus and subsp. flavescens, C. cornigera, C. cyrenaica, C. humilis (formerly sometimes in the genus Bourgaea) and C. syriaca. The cultivated artichoke (formerly C. scolymus) and cardoon are both included in C. cardunculus. One species, C. tournefortii , is excluded from Cynara. A cladistic study of the genus is also undertaken and its morphology, anatomy and phytogeography are discussed.  相似文献   

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Madagascar is home to many endemic plant and animal species owing to its ancient isolation from other landmasses. This unique fauna includes several lineages of termites, a group of insects known for their key role in organic matter decomposition in many terrestrial ecosystems. How and when termites colonised Madagascar remains unknown. In this study, we used 601 mitochondrial genomes, 93 of which were generated from Malagasy samples, to infer the global historical biogeography of Neoisoptera, a lineage containing more than 80% of described termite species. Our results indicate that Neoisoptera colonised Madagascar between 7 and 10 times independently during the Miocene, between 8.4 and 16.6 Ma (95% HPD: 6.1–19.9 Ma). This timing matches that of the colonization of Australia by Neoisoptera. Furthermore, the taxonomic composition of the Neoisopteran fauna of Madagascar and Australia are strikingly similar, with Madagascar harbouring an additional two lineages absent from Australia. Therefore, akin to Australia, Neoisoptera colonised Madagascar during the global expansion of grasslands, possibly helped by the ecological opportunities arising from the spread of this new biome.  相似文献   

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Aim To demonstrate that parsimony analysis of endemicity (PAE) is not analogous to a cladistic biogeographical analysis. Location We used six data sets from previously published studies from around the world. Methods In order to test the efficiency of PAE in recovering historical relationships among areas, we performed an empirical comparison of nodes recovered with PAE, primary Brooks parsimony analysis (BPA), and an event‐based method using three models (maximum codivergence, reconciled trees, and the default model of the treefitter program) for six data sets. We measured the performance of PAE in recovering historical area relationships by counting the number and examining the content of nodes recovered by PAE and by historical methods. The dispersal/vicariance ratio was calculated to assess the prevalence of dispersal or vicariance in each reconstruction and its relationship to the performance of PAE. Results Our results show that PAE recovers an average of 17.25% of historical nodes. PAE and BPA tend to provide similar results; however, in relation to the event‐based models, PAE performance was poor under all the tested scenarios. Although in some cases PAE reconstructions are more resolved than historical reconstructions, this does not necessarily mean that PAE produces more informative answers. These additional nodes correspond to unsupported statements that are based solely on the distributional data of taxa and not on their phylogenetic history. In other words, these nodes were not found by the historical methods, which take phylogenetics into account. The number of historical nodes recovered using PAE was in general negatively correlated with the dispersal/vicariance ratio. Main conclusions Our results show that PAE is unable to recover historical patterns and therefore does not fit into the current paradigm of historical biogeography. These findings raise doubts regarding conclusions derived from biogeographical studies that interpret PAE trees as area cladograms. We acknowledge that PAE aims to describe but does not explain the current distribution of organisms. It is therefore a useful tool in other biogeographical or ecological analyses for exploring the distribution of taxa or for establishing hypotheses of primary homology between areas.  相似文献   

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