The physical basis of reflective communication between fish,with special reference to the horse mackerel,Trachurus trachurus

Some properties of reflecting structures in the external surfaces of Trachurus trachurus and some other fish are described. These are related to the hypothesis that such structures are useful, especially to schooling fish, for communicating information on relative positions, orientations, and movements between neighbours. In addition to the silvery layers on the main body surfaces, there are: (a) highly silvered patches on the tail, the pectoral fins and the jaws which, in the sea, will become much brighter or darker with any movement such as a tailbeat or mouth opening which changes their orientations in the ambient lightfield, and (b) structures such as the dorsal lateral line which, in the sea, will only appear bright from certain directions. To us, the colours of the ventral flanks change from bright red to blue with direction orientations and have special reflectivity curves close to those predicted by A.F. Huxley for interference reflectors which are ''ideal'' λ/4 stacks of guanine crystals and cytoplasm. The wavebands best reflected by such platelets move to shorter wavelengths with increasing angle of incidence, also in accord with these equations. At normal incidence, the outer layer of platelets reflects maximally for far-red light which penetrates only a short distance in the sea. Such layers can, however, be useful at oblique angles where they reflect maximally in the yellow and blue. The inner layer of reflectors reflects very strongly in the blue at normal incidence, but reflects in the ultra-violet at oblique angles. Some theoretical studies are made on the ways in which the patterns of reflectivity by single and superposed layers of λ/4 stacks could signal a fish''s movements or its position relative to its neighbours.     

Lateral packing of mineral crystals in bone collagen fibrils

Combined small-angle x-ray scattering and transmission electron microscopy studies of intramuscular fish bone (shad and herring) indicate that the lateral packing of nanoscale calcium-phosphate crystals in collagen fibrils can be represented by irregular stacks of platelet-shaped crystals, intercalated with organic layers of collagen molecules. The scattering intensity distribution in this system can be described by a modified Zernike-Prins model, taking preferred orientation effects into account. Using the model, the diffuse fan-shaped small-angle x-ray scattering intensity profile, dominating the equatorial region of the scattering pattern, could be quantitatively analyzed as a function of the degree of mineralization. The mineral platelets were found to be very thin (1.5 nm ∼ 2.0 nm), having a narrow thickness distribution. The thickness of the organic layers between adjacent mineral platelets within a stack is more broadly distributed with the average value varying from 6 nm to 10 nm, depending on the extent of mineralization. The two-dimensional analytical scheme also leads to quantitative information about the preferred orientation of mineral stacks and the average height of crystals along the crystallographic c axis.     

Shedding new light on scleractinian coral recruitment

Studies of the distribution of scleractinian coral recruits within stacks of settlement plates at Orpheus Island and Lizard Island revealed that corals are recruited almost exclusively on the lower surfaces of the settlement plates. The absence of recruitment on the upper surfaces of the plates is attributed to the observed high levels of sediment on these surfaces. All hermatypic coral spat were found near the edge of the settlement plates, whereas ahermatypic corals were located towards the center. Growth and survivorship of hermatypic corals were dependent on the position of attachment, decreasing with distance from the edges of the plates. Survivorship of ahermatypic corals was uniformly high. Light levels on the lower surfaces of the plates within the stacks were shown to decay asymptotically as a function of distance from the plate edge. There was a highly significant non-linear relationship between relative light intensity on the settlement plates and the positions of coral spat. In the absence of evidence for selective hydrodynamic deposition of spat, these results suggest that light intensity is the most important factor in determining the position of attachment of coral spat on the underside of these plates.     

Twinned Raphides of Calcium Oxalate in Grape (Vitis): Implications for Crystal Stability and Function

Among the higher plants that accumulate crystalline calcium oxalate, many taxa characteristically produce raphides, or needle-shaped crystals. Substantial evidence has accumulated indicating that raphides function in plant defenses against herbivory and that their acicular shape is a critical component in proposed mechanisms for these defenses. Previous observations have shown that raphides in members of the Vitaceae are twinned crystals. In this study, the fine structure of raphides in Vitis was examined in order to determine the nature of twinning. Rotation of isolated raphides under cross-polarized light revealed extinction patterns that indicated that raphides are twinned along their length. In cross sections of raphides, the twin plane extends across the raphides, parallel to their surfaces. The dissolution patterns observed in etched crystals indicate that the type of twinning is rotational. Parallels in other biomineralization systems indicate that the rotational nature of the twinning may increase mechanical strength. In addition, because twinning may affect crystal growth or enhance stability and persistence of crystals, it could be an important factor in allowing plant cells to produce the raphide morphology.     

Diurnal variations in myeloid bodies of the newt retinal pigment epithelium

Summary Myeloid bodies (MBs) occur in the newt (Notophthalmus viridescens) retinal pigment epithelium (RPE) and are similar to areas of specialized endoplasmic reticulum found in a variety of other cell types. The function of these structures is unknown, although a role in lipid metabolism has been strongly suggested. Random samples from conventionally-fixed and sectioned newt RPE, obtained over a 24-hr cycle (LD 1212), were examined by electron microscopy. Myeloid bodies appear as stacks of flattened endoplasmic reticulum-associated saccules which increase in length and number as the RPE accumulates shed outer segment material, prior to increase in the amount of stored lipid. Associations of MBs with the nuclear envelope can be related to this increased length. Myeloid bodies decrease numerically in the cell as phagosomes are removed from the cytoplasm, but a decrease in mean sectional MB area, seen in the light phase, is counteracted in darkness where individual MBs are larger than those found in the light. The total sectional area of MBs within a cell and their mean length varied depending on the lighting condition; differences were also found between eyes after extended periods of continuous light and dark. Ribosomes were found in association with the surfaces of both flattened and circular MBs, but they were consistently more densely associated with the shorter concave surfaces of curved regions. A new hypothesis for MB function is presented, which is concerned with their role in isolating toxic lipids such as retinoids, which are accumulated during phagocytosis of shed outer segment tips, and which are capable of disrupting membrane-bound systems necessary for their eventual metabolism and safe storage.     

Structural and morphological characterization of ultralente insulin crystals by atomic force microscopy: evidence of hydrophobically driven assembly.

Although x-ray crystal structures exist for many forms of insulin, the hormone involved in glucose metabolism and used in the treatment of diabetes, x-ray structural characterization of therapeutically important long-acting crystalline ultralente insulin forms has been elusive because of small crystal size and poor diffraction characteristics. We describe tapping-mode atomic force microscopy (TMAFM) studies, performed directly in crystallization liquor, of ultralente crystals prepared from bovine, human, and porcine insulins. Lattice images obtained from direct imaging of crystal planes are consistent with R3 space group symmetry for each insulin type, but the morphology of the human and porcine crystals observed by AFM differs substantially from that of the bovine insulin crystals. Human and porcine ultralente crystals exhibited large, molecularly flat (001) faces consisting of hexagonal arrays of close packed hexamers. In contrast, bovine ultralente crystals predominantly exhibited faces with cylindrical features assignable to close-packed stacks of insulin hexamers laying in-plane, consistent with the packing motif of the (010) and (011) planes. This behavior is attributed to a twofold increase in the hydrophobic character of the upper and lower surfaces of the donut-shaped insulin hexamer in bovine insulin compared to its human and porcine counterparts that results from minor sequence differences between these insulins. The increased hydrophobicity of these surfaces can promote hexamer-hexamer stacking in precrystalline aggregates or enhance attachment of single hexamers along the c axis at the crystal surface during crystal growth. Both events lead to enhanced growth of ¿hk0¿ planes instead of (001). The insulin hexamers on the (010) and (110) faces are exposed "edge-on" to the aqueous medium, such that solvent access to the center of the hexamer and to solvent channels is reduced compared to the (001) surface, consistent with the slower dissolution and reputed unique basal activity of bovine ultralente insulin. These observations demonstrate that subtle variations in amino acid sequence can dramatically affect the interfacial structure of crystalline proteins.     

Self-assembled monolayers of rigid thiols

The preparation, structure, properties and applications of self-assembled monolayers (SAMs) of rigid 4-mercapto-biphenyls are briefly reviewed. The rigid character of the biphenyl moiety results in a molecular dipole moment that affects both the adsorption kinetics on gold surfaces, as well as the equilibrium structure of mixed SAMs. Due to repulsive intermolecular interaction, the Langmuir isotherm model does not fit the adsorption kinetics of these biphenyl thiols, and a new Ising model was developed to fit the kinetics data. The equilibrium structures of SAMs and mixed SAMs depend on the polarity of the solution from which they were assembled. Infrared spectroscopy suggests that biphenyl moieties in SAMs on gold have small tilt angles with respect to the surfaces normal. Wetting studies shows that surfaces of these SAMs are stable for months, thus providing stable model surfaces that can be engineered at the molecular level. Such molecular engineering is important for nucleation and growth studies. The morphology of glycine crystals grown on SAM surfaces depends on the structure of the nucleating glycine layer, which, in turn, depends on the H-bonding of these molecules with the SAM surface. Finally, the adhesion of PDMS cross-linked networks to SAM surfaces depends on the concentration of interfacial H-bonding. This non-linear relationship suggests that the polymeric nature of the elastomer results in a collective H-bonding effect.     

The tubular network of the Golgi apparatus

 Golgi apparatus of both plant and animal cells are characterized by an extensive system of approximately 30 nm diameter peripheral tubules. The total surface area of the tubules and associated fenestrae is thought to be approximately equivalent to that of the flattened portions of cisternae. The tubules may extend for considerable distances from the stacks. The tubules are continuous with the peripheral edges of the stacked cisternae, but the way they interconnect differs across the stack. In plant cells, for example, tubules associated with the near-cis and mid cisternae often begin to anastomose close to the peripheral edges of the stacked cisternae, whereas the tubules of the trans cisternae are less likely to anastomose and are more likely to be directly continuous with the peripheral edges of the stacked cisternae. Additionally, the tubules may blend gradually into fenestrae that surround some of the stack cisternae. Because of the large surface area occupied by tubules and fenestrae, it is reasonable to suppose that these components of the Golgi apparatus play a significant role in Golgi apparatus function. Tubules clearly interconnect closely adjacent stacks of the Golgi apparatus and may represent a communication channel to synchronize stack function within the cell. A feasible hypothesis is that tubules may be a potentially static component of the Golgi apparatus in contrast to the stacked cisternal plates which may turn over continuously. The coated buds associated with tubules may represent the means whereby adjacent Golgi apparatus stacks exchange carbohydrate-processing enzymes or where resident Golgi apparatus proteins are introduced into and out of the stack during membrane flow differentiation. The limited gradation of tubules from cis to medial to trans offers additional possibilities for functional specialization of Golgi apparatus in keeping with the hypothesis that tubules are repositories of resident Golgi apparatus proteins protected from turnover during the flow differentiation of the flattened saccules of the Golgi apparatus stack. Accepted: 3 November 1997     

Atomic force microscopy of the morphology of the matrix and mineral components of the otolith of Hyperoglyphe antarctica

The sagittal otolith of Hyperoglyphe antarctica (Centrolophidae: Teleostei) has a prismatic structure in which the anti-sulcal growth axes of each prism consist of a series of nested cones each composed of a mineral layer followed by an organic matrix layer. Broken sections show the mineral layers to be composed of stacks of crystals. Otolith matrix that has been decalcified and air-dried, or critical-pont-dried, retains a periodic structure of repeating high and low matrix density. At high magnifications, both broken whole crystal surfaces and decalcified matrix surfaces have a granular structure. Chloroxbleached whole otoliths also show a granular crystalline structure. At higher magnifications, the air-dried matrix showed a parallel fiber structure with similar dimensions to keratin fibers. © 1995 Wiley-Liss, Inc.     

STUDIES ON THE ENDOPLASMIC RETICULUM : V. Its Form and Differentiation in Pigment Epithelial Cells of the Frog Retina

Pigment epithelial cells of the frog's retina have been examined by methods of electron microscopy with special attention focused on the fine structure of the endoplasmic reticulum and the myeloid bodies. These cells, as reported previously, send apical prolongations into the spaces between the rod outer segments, and within these extensions, pigment migrates in response to light stimulation. The cytoplasm of these cells is filled with a compact lattice of membrane-limited tubules, the surfaces of which are smooth or particle-free. In this respect, the endoplasmic reticulum here resembles that encountered in cells which produce lipid-rich secretions. The myeloid bodies comprise paired membranes arranged in stacks shaped like biconvex lenses. At their margins the membranes are continuous with elements of the ER and in consequence of this the myeloid body is referred to as a differentiation of the reticulum. The paired membranes resemble in their thickness and spacings those which make up the outer segments; they are therefore regarded as intracellular photoreceptors of possible significance in the activation of pigment migration and other physiologic functions of these cells. The fuscin granules are enclosed in membranes which are also continuous with those of the ER. The granules seem to move independently of the prolongations in which they are contained. The report also describes the fine structure of the terminal bar apparatus, the fibrous layer intervening between the epithelium and the choroid blood vessels, and comments on the functions of the organelles depicted.     

The formation of intracellular crystals in midgut glands of Limnoria lignorum

Certain morphological features of intracellular crystal formation within the midgut glands of Limnoria lignorum (Rathke) have been studied with the electron microscope and cytochemical methods. A correlation has been established between Golgi membranes and formation of the crystals. The Prussian blue reaction reveals quantities of iron localized in the intracellular crystals and in small granular structures seen in the apical region of the cells. These granules can be identified as accumulations of Golgi membranes, with which iron-containing particles are associated. When these membrane configurations are studied with the electron microscope, they can be classified and arranged in an assumed sequence which is thought to represent successive stages in the development of crystals. As the membrane systems become progressively specialized, increasing accumulations of dense granular material appear within their interstices. This material is rich in iron and probably represents the component responsible for the positive Prussian blue reaction. This material also appears to be a precursor substance for iron-containing protein molecules which are synthesized and arranged to make up the crystals. These iron-containing molecules are first deposited in orderly array as double rows of dense particles on certain internal membranes of the specialized Golgi complexes. The membranes later disappear and the particles form definitive crystals by rearrangement into a hexagonal close-packed pattern.     

An ultrastructural study of the development of the dermal iridophores and structural pigmentation in Poecilia reticulata (peters)

Three general stages of iridophore development were found in Poecilia reticulata that correspond to the development of structural pigmentation. The first stage was prevalent in fish embryos about to hatch to young fish 4 months old. Dermal cells containing elements of endoplasmic reticulum and a Golgi apparatus developed into iridophores. The endoplasmic reticulum early in iridophore development became a few sparse cisternae, and the Golgi apparatus elaborated long rectangular vacuoles with two membranes. From 5 to 15 vacuoles were arranged in parallel stacks in each developing iridophore. Crystals of guanine were deposited within the inner compartment of each vacuole. At this stage of development, the young fish had only a few dermal iridophores next to the lateral muscle. Fish 4 to 6 months old had a more advanced type of iridophore development including several layers of iridophore cells in the dermis. The innermost iridophores near the muscle had many mature crystal-containing vacuoles (iridosomes). Each cell had upt to three stacks of 10–20 iridosomes with their long axis oriented at a slight oblique angle to the surface of the fish. The outer layers of iridophores resembled the immature developing cells found in very young fish. The third developmental stage was found in sexually functional adults. All dermal iridophores contained 2–3 groups of 10–20 mature iridosomes. In mature iridophores, the Golgi apparatus was not found in the cytoplasm. The thickness of the guanine crystals (70 nm) and cytoplasmic intervals (90 nm) results in a constructive interference reflection of 496 nm (blue-green). This iridescence increased concomitantly with the increase in iridophore cells in the dermis and the maturation of their iridosomes.     

Chloride cells and pavement cells in gill epithelia of Acipenser naccarii: ultrastructural modifications in seawater‐acclimated specimens

Modifications in the chloride (mitochondria‐rich) and pavement cells of the gill epithelia of the Adriatic sturgeon Acipenser naccarii after their transfer under hypertonic environmental conditions (salinity 35) were examined by light and electron microscopy. In contrast to freshwater specimens, seawater‐acclimated fish showed a marked increase in the number and size of chloride cells. Ultrastructural modifications included: presence of a slightly invaginated apical crypt, a darker cytoplasm, a more compact tubular system, a major increase in cisternae from Golgi apparatus stacks and flattened‐out sacs with dilated ends that produced an increase in lateral and basal cell surfaces. All these changes indicated enhanced cellular activity. Pavement cells, which largely covered the chloride cells on the gill filament and lamella, exhibited a complex system of microridges on their apical surface. Typical features included numerous desmosomes that characterized the intercellular junction, and the presence in the apical cytoplasm of bundles of filaments and of electro‐dense vesicles in freshwater fish or clear vesicles in seawater‐acclimated animals.     

Magnetite biomineralization and geomagnetic sensitivity in higher animals: an update and recommendations for future study

Magnetite, the only known biogenic material with ferromagnetic properties, has been identified as a biochemical precipitate in three of the five kingdoms of living organisms, with a fossil record that now extends back nearly 2 billion years. In the magnetotactic bacteria, protoctists, and fish, single-domain crystals of magnetite are arranged in membrane-bound linear structures called magnetosomes, which function as biological bar magnets. Magnetosomes in all three of these groups bear an overall structural similarity to each other, which includes alignment of the individual crystallographic [111] directions parallel to the long axis. Although the magnetosomes represent only a small volume fraction in higher organisms, enough of these highly energetic structures are present to provide sensitivity to extremely small fluctuations and gradients in the background geomagnetic field. Previous experiments with elasmobranch fish are reexamined to test the hypothesis that gradients played a role in their successful geomagnetic conditioning, and a variety of four-turn coil designs are considered that could be used to test the various hypotheses proposed for them.     

The Formation of Intracellular Crystals in Midgut Glands of Limnoria lignorum

Certain morphological features of intracellular crystal formation within the midgut glands of Limnoria lignorum (Rathke) have been studied with the electron microscope and cytochemical methods. A correlation has been established between Golgi membranes and formation of the crystals. The Prussian blue reaction reveals quantities of iron localized in the intracellular crystals and in small granular structures seen in the apical region of the cells. These granules can be identified as accumulations of Golgi membranes, with which iron-containing particles are associated. When these membrane configurations are studied with the electron microscope, they can be classified and arranged in an assumed sequence which is thought to represent successive stages in the development of crystals. As the membrane systems become progressively specialized, increasing accumulations of dense granular material appear within their interstices. This material is rich in iron and probably represents the component responsible for the positive Prussian blue reaction. This material also appears to be a precursor substance for iron-containing protein molecules which are synthesized and arranged to make up the crystals. These iron-containing molecules are first deposited in orderly array as double rows of dense particles on certain internal membranes of the specialized Golgi complexes. The membranes later disappear and the particles form definitive crystals by rearrangement into a hexagonal close-packed pattern.     

Enamel ultrastructure and masticatory function in molars of the American opossum, Didelphis virginiana

Maxillary and mandibular molars of the American opossum, Didelphis virginiana L., were viewed in the scanning electron microscope (SEM) after acid-etching or after cutting and acid-etching. Observations were made on enamel prism patterns as they relate to functional properties of the tooth at a particular site. Molars at different stages of wear were also observed under a dissecting microscope; worn surfaces were correlated with function and enamel ultrastructure. Pounding surfaces of molar cusps wear more rapidly than near-vertical shearing surfaces or crushing basins (i.e. the trigon and talonid basin). Pounding surfaces are subjected to abrasion by food and arc not normally involved in tooth-tooth contact. Near-vertical shearing surfaces and basins used for crushing do experience tooth-tooth contact, but are surprisingly more resistant to wear. Prisms at pounding sites approach the occlusal surface at a near 90° angle and are surrounded with very thick interprismatic (IP) enamel parallel to the occlusal surface of the tooth. The pounding pattern is present at tips of cusps and at occlusal surfaces of ridges of the tooth. At near-vertical shearing surfaces, the prisms approach the outer surface obliquely and are surrounded with IP crystals which are perpendicular to the vertical surface. The angle between prismatic and IP enamel in these patterns is 60–90° in a cervical to occlusal direction. In basins of the tooth used principally for crushing and some shearing, IP enamel is perpendicular to the changing slope of the basin and the prisms are usually at a 55–65° angle to the IP enamel. When the pounding and shearing-crushing patterns meet at a ridge, a distinct seam is observed. Pounding forces occur parallel to the long axis of the prisms and perpendicular to the thick IP enamel (i.e. perpendicular to the long axis of the IP crystals) lying on either side of the prisms. Shearing and crushing forces occur at an oblique angle to the prism, and interprismatic enamel is more evenly distributed about the prism. A spiral pattern is found at the bottoms of the trigon and talonid basins, but not at the bottom of the trigonid which is a non-occluding basin. It is concluded that the differential rates of wear of the enamel surfaces are necessary in maintaining the sharp cutting edges and effective crushing basins of the tribosphenic molar, and the ultrastructural arrangements of the enamel prisms are of functional significance.     

Self-repair of biological fibers catalyzed by the surface of a virus crystal.

Helical fibers, presumably proteinaceous and of microbial origin, have been visualized by atomic force microscopy on the surfaces of crystals of satellite tobacco mosaic virus. If the crystals are growing, then the fibers are incorporated intact into the crystal lattice. If broken on the crystal surface, then within a few minutes, the fibers self-reassemble to reestablish continuity. This, we believe, is the first observation of such a crystal surface-catalyzed repair of a biological structure. The surfaces of virus crystals provide ideal workbenches for the visualization and manipulation of nanoscale objects, particularly extended structures such as these fibers.     

Possible involvement of the ampullary electroreceptor system in detection of frequency-modulated electrocommunication signals in Eigenmannia

Behavioral and electrophysiological experiments were conducted to examine whether frequency-modulated electrocommunication signals are detected by the ampullary electroreceptor system in Eigenmannia. First, frequency-modulated electric organ discharges were found to contain a low-frequency component that could be detected by the ampullary system. Second, fish were successfully trained to distinguish a frequency-modulated signal, which contained a low-frequency component as in natural signals, from an artificial signal in which the low-frequency component was eliminated but still modulated in frequency. Subsequently, the trained fish responded without reinforcement to a low-frequency sinusoidal signal which mimicked the low-frequency component in the frequency-modulated signal, suggesting that the fish used the ampullary system to detect frequency modulation. Finally, physiological recording from ampullary afferent fibers demonstrated that they respond to frequency-modulated signals as predicted from the signal's low-frequency component. Electrophysiological study also showed that detection of frequency modulation by the ampullary system is immune to the presence of other constant electric organ discharges. Accepted: 28 June 1998     

Enzymatic depolymerization of lamellar single crystals of nigeran

Lamellar single crystals of the α-glucan: nigeran have been subjected to controlled enzymic degradation as an approach to understanding polysaccharide organization in these crystals. Analysis of both reactant and products by various methods argues that a situation exists where the crystals are inaccessible at 20°C but become increasingly accessible as the temperature approaches that of solution for the crystals in water. One has to conclude that chain folds are inaccessible to enzymes at 20°C and become increasingly accessible as one approaches the “melting temperature.” This could be due to increased mobility of the surface chains as temperature is raised, which produces large dynamic loops and makes enzyme degradation possible. The general conclusion is that nigeran single-crystal surfaces are disordered and increasingly mobile close to their dissolution temperature in water.     

Bands against stripes on the backs of mackerel,Scomber scombrus L.

A thin band of reflecting platelets overlies the central parts of the light and dark stripes found on each side of the dorsal surfaces of the body of the mackerel (Scomber scombrus L.). When this fish has its antero-posterior axis horizontal and its mid-dorsal and mid-ventral lines in the same vertical plane, V, the surfaces of the reflecting platelets in these bands are within a few degrees of being vertical. These surfaces are, however, tipped about 17 degrees from plane V towards the tail. In the angular distributions of radiance commonly found in the sea, the reflections from these bands can mask parts of the pattern of light and dark stripes seen by neighbours in ways that depend on the orientation of the fish in the external light field and the position of the fish relative to its neighbours. With this arrangement, when the fish changes its orientation and/or its velocity with respect to neighbouring fish, this is signalled to the neighbours as changes in the patterns of brightness of its dorsal surfaces. Relatively small changes in roll, pitch and yaw can produce large changes in appearance and, as vision is a most important sense in the mackerel, it seems likely that these changes are important for signalling.