Bacterial diversity and community structure in polygonal tundra soils from Samoylov Island, Lena Delta, Siberia

During the Arctic summer, bacteria are active above the permafrost in an environment with sharp temperature and oxygen gradients. The present study addressed the diversity and abundance of bacteria in soil layers near the surface and above the permafrost of the rim and center of a low-centered polygon in the Lena Delta, Siberia. 16S rRNA gene clone libraries revealed the presence of all major soil bacterial groups and of the candidate divisions OD1, OP5, and OP11, and indicated a small-scale heterogeneity of these polygonal tundra soils. The diversity at the top of the elevated polygon rim was significantly different from that of the bottom and from both water-saturated sites of the polygon's center. The overall species-level diversity was very high (Shannon index of 5.3) but varied within the sites and decreased towards the permafrost table, coinciding with decreasing dissolved organic carbon (DOC) and phosphate concentrations. According to the number of operational taxonomical units (OTUs) and cells visualized by fluorescence in-situ hybridization, Bacteroidetes and Actinobacteria were the dominant members of the bacterial community in all sites. Bacteroidetes contributed almost 50% to all Bacteria cells while sequences affiliated with Bacteroidetes/Chlorobi represented on average 23% of all OTUs. Our results provide evidence of the extremely diverse bacterial communities present in permafrost soils and of the influence of nutrient concentrations, oxygen, and DOC on diversity.     

Body mass changes in waders (Charadrii) in a high arctic area at northern Taimyr, Siberia

Body mass data were collected for 5 species of tundra waders during 6 breeding seasons to study variation in nutrient reserves relative to high arctic climatic conditions and the stage of reproduction. Structural size was accounted for by the 1st Principal Component of external linear measurements: wing length, bill length and tarsus length. SandpipersCalidris spp. were on average lighter in phenologically late seasons, while mass of Turnstones (Arenaria interpres) was similar in all years. Mass of waders was lower during brood-rearing than during incubation. Body mass during pre-nesting was most variable between years, reflecting the unpredictable weather conditions in this period. Monogamous species (KnotsCalidris canutus and Turnstones) began to breed earlier, and were on average, as heavy during the pre-nesting period as during incubation. In contrast, species with a proven or suspected rapid double-clutch breeding system (Little StintsC. minuta and SanderlingsC. alba) began to breed later and had during the laying period masses close to those of adults attending broods, and lower than during incubation. Body mass of the two latter species and Curlew Sandpipers (Calidris ferruginea) varied during incubation, reaching peak at 7 to 13 days after clutch completion.

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Zusammenfassung Von fünf Tundra-Watvogelarten wurden in sechs Brutperioden Daten zur Körpermasse gewonnen, um die Dynamik der Energiereserven in Abhängigkeit von den klimatischen Bedingungen der Hocharktis und vom Fortpflanzungsstadium zu analysieren. Der Einfluß der Körpermaße auf die Masse wurde bei der statistischen Auswertung durch die Einbeziehung der 1. Hauptkomponente von Flügel-, Schnabel- und Tarsuslänge berücksichtigt. StrandläuferCalidris spec. erwiesen sich in späten Jahren als leichter, während in der Körpermasse von Steinwälzern (Arenaria interpres) keine Unterschiede festgestellt werden konnten. Die Körpermasse aller untersuchter Arten war während der Betreuung der Jungvögel geringer als während Brütezeit. Die Masse in der Zeit vor der Brut variierte in Übereinstimmung mit den wechselnden Wetterbedingungen in den einzelnen Jahren am stärksten. Monogame Arten (KnutCalidris canutus und Steinwälzer) begannen früher mit der Fortpflanzung; ihre Körpermasse in der Phase von der Brut und während der Brütezeit war im Mittel etwa gleich. Im Gegensatz dazu begannen Arten, bei denen ein Doppelbrutsystem nachgewiesen wurde oder vermutet wird (ZwergstrandläuferC. minuta und SanderlingC. alba), später mit dem Nestbau, wobei die Körpermasse auf ein Niveau absinkt, das dem während der Betreuung der Jungvögel nahekommt und geringer ist, als das während der Brütezeit. Bei den beiden letzten Arten sowie beim Sichelstrandläufer (Calidris ferrugunea) veränderte sich die Körpermasse während des Brütens und erreichte ein Maximum zwischen dem 7. und dem 13. Tag nach Beendigung der Eiablage.

     

Soil carbon and nitrogen dynamics along a latitudinal transect in Western Siberia, Russia

An 1800-km South to North transect (N 53°43′ to 69°43′) through Western Siberia was established to study the interaction of nitrogen and carbon cycles. The transect comprised all major vegetation zones from steppe, through taiga to tundra and corresponded to a natural temperature gradient of 9.5°C mean annual temperature (MAT). In order to elucidate changes in the control of C and N cycling along this transect, we analyzed physical and chemical properties of soils and microbial structure and activity in the organic and in the mineral horizons, respectively. The impact of vegetation and climate exerted major controls on soil C and N pools (e.g., soil organic matter, total C and dissolved inorganic nitrogen) and process rates (gross N mineralization and heterotrophic respiration) in the organic horizons. In the mineral horizons, however, the impact of climate and vegetation was less pronounced. Gross N mineralization rates decreased in the organic horizons from south to north, while remaining nearly constant in the mineral horizons. Especially, in the northern taiga and southern tundra gross nitrogen mineralization rates were higher in the mineral compared to organic horizons, pointing to strong N limitation in these biomes. Heterotrophic respiration rates did not exhibit a clear trend along the transect, but were generally higher in the organic horizon compared to mineral horizons. Therefore, C and N mineralization were spatially decoupled at the northern taiga and tundra. The climate change implications of these findings (specifically for the Arctic) are discussed.     

Aboveground biomass allocation,leaf growth,and photosynthesis patterns in tundra plant forms in arctic Alaska

Summary Tundra plant growth forms can generally be characterized as consisting predominantly of low-growing perennial grasses and sedges, perennial herbaceous forbs, dwarf deciduous shrubs, and dwarf evergreen shrubs. Gross aboveground carbon allocation, leaf growth, and photosynthesis pattern studies were initiated to develop a quantitative understanding of the functional importance of these particular tundra growth forms. Photosynthetic capacities of 13 species were determined under standardized exposure conditions using a¹⁴CO₂ field system and ranged between 5 and 47 mg CO₂·g dry wt^-1·h^-1. These results, in conjunction with detailed leaf growth determinations, support the generalization that species with an evergreen growth form have lower photosynthetic capacities than species with a perennial graminoid, forb, or deciduous shrub growth form. However, these low photosynthetic capacities in evergreen shrubs are associated with relatively extended leaf longevities. Conversely, deciduous shrub forms exhibited high photosynthetic capacities, but were offset by relatively short leaf longevity periods. The perennial grasses, sedges, and forbs showed patterns intermediate to these. As a result, it appears that among tundra species of different growth form, photosynthetic capacity is inversely related to leaf longevity.     

The breeding productivity of dark-bellied brent geese and curlew sandpipers in relation to changes in the numbers of arctic foxes and lemmings on the Taimyr Peninsula, Siberia —

There were about three-year cycles in the populations of arctic foxes, and the breeding productivities of brent geese and curlew sandpipers on the Taimyr Peninsula, Russia, The populations of arctic foxes and lemmings changed in synchrony. The breeding productivities of the birds tended to be good when the arctic foxes were increasing in numbers and poor when the arctic foxes were decreasing. There was a negative relationship between arctic fox numbers (or occupied lairs) and the breeding productivity of brent geese in the following year. Although there was evidence of wide-spread synchrony In the lemming cycle across the Taimyr Peninsula, some localities showed differences, However, such sites would still have been influenced by the general pattern of fox abundance in the typical tundra zone of the Taimyr Peninsula, where most of the arctic foxes breed and from which extensive movements of foxes occur after a decline in lemming numbers. The results support a prey-switching hypothesis (also known as the alternative prey hypothesis) whereby arctic foxes, and other predators, feed largely on lemmings when these are abundant or increasing, but switch to birds when the lemming population is small or declining. The relationships between arctic foxes, lemmings and brent geese may be further influenced by snowny owls which create fox-exclusion zones around their nests, thus providing safe nesting areas for the geese.     

Responses of moist non-acidic arctic tundra to altered environment: productivity, biomass, and species richness

In arctic Alaska, researchers have manipulated air temperature, light availability, and soil nutrient availability in several tundra communities over the past two decades. These communities responded quite differently to the same manipulations, and species responded individualistically within communities and among sites. For example, moist acidic tundra is primarily nitrogen (N)‐limited, whereas wet sedge tundra is primarily phosphorus (P)‐limited, and the magnitude of growth responses varies across sites within communities. Here we report results of four years of manipulated nutrients (N and/or P) and/or air temperature in an understudied, diverse plant community, moist non‐acidic tussock tundra, in northern Alaska. Our goals were to determine which factors limit above‐ground net primary productivity (ANPP) and biomass, how community composition changes may affect ecosystem attributes, and to compare these results with those from other communities to determine their generality. Although relative abundance of functional groups shifted in several treatments, the only significant change in community‐level ANPP and biomass occurred in plots that received both N and P, driven by an increase in graminoid biomass and production resulting from a positive effect of adding N. There was no difference in community biomass among any other treatments; however, some growth forms and individual species did respond. After four years no one species has come to dominate the treatment plots and species richness has not changed. These results are similar to studies in dry heath, wet sedge, and moist acidic tundra where community biomass had the greatest response to both N and P and warming results were more subtle. Unlike in moist acidic tundra where shrub biomass increased markedly with fertilization, our results suggest that in non‐acidic tundra carbon sequestration in plant biomass will not increase substantially under increased soil nutrient conditions because of the lack of overstory shrub species.     

Soil microbial biomass, nutrient availability and nitrogen mineralization potential among vegetation-types in a low arctic tundra landscape

Copper uptake, localisation and biochemical and physiological traits were studied in hydroponically-grown Erica andevalensis plants at different increasing concentrations of Cu (1 µM, 50 µM, 100 µM, 250 µM, and 500 µM). Increasing Cu concentration in the nutrient medium led to a significative reduction in plant growth rate, an increase in root Cu concentration, leaf photosynthetic pigments and root peroxidase activity. Copper accumulation followed the pattern roots>stems>leaves, a typical behaviour of metal-excluders. Copper treatments led to significant changes in the free amino acid composition in shoots and roots and the concentration of polyamines in shoots. Analysis by scanning electron microscopy coupled with elemental X-ray analysis (SEM–EDX) showed a partial restriction of upward Cu transport by root vascular tissues. In leaf tissues, Cu mostly accumulated in the abaxial epidermis, suggesting a mechanism of compartmentalization to restrict mesophyll accumulation. The toxic effects of excess Cu were avoided to a certain extent by root immobilization, tissue compartmentalization, synthesis of complexing amino acids and induction of enzymes to prevent oxidative damage are among mechanisms adopted by Erica andevalensis to thrive in acidic-metalliferous soils.     

The processes of methane formation and oxidation in the soils of the Russian arctic tundra

Methane emission from the following types of tundra soils was studied: coarse humic gleyey loamy cryo soil, peaty gley soil, and peaty gleyey midloamy cryo soil of the arctic tundra. All the soils studied were found to be potential sources of atmospheric methane. The highest values of methane emission were recorded in August at a soil temperature of 8-10 degrees C. Flooded parcels were the sources of atmospheric methane throughout the observation period. The rates of methane production and oxidation in tundra soils of various types at 5 and 15 degrees C were studied by the radioisotope method. Methane oxidation was found to occur in bog water, in the green part of peat moss, and in all the soil horizons studied. Methane formation was recorded in the horizons of peat, in clay with plant roots, and in peaty moss dust of the bogey parcels. At both temperatures, the methane oxidation rate exceeded the rate of methane formation in all the horizons of the mossy-lichen tundra and of the bumpy sinkhole complex. Methanogenesis prevailed only in a sedge-peat moss bog at 15 degrees C. Enrichment bacterial cultures oxidizing methane at 5 and 15 degrees C were obtained. Different types of methanotrophic bacteria were shown to be responsible for methane oxidation under these conditions. A representative of type I methylotrophs oxidized methane at 5 degrees C, and Methylocella tundrae, a psychroactive representative of an acidophilic methanotrophic genus Methylocella, at 15 degrees C.     

Nitrogen dynamics in arctic tundra soils of varying age: differential responses to fertilization and warming

In the foothills of the Brooks Range, Alaska, different glaciation histories have created landscapes with varying soil age. Productivity of most of these landscapes is generally N limited, but varies widely, as do plant species composition and soil properties (e.g., pH). We hypothesized that the projected changes in productivity and vegetation composition under a warmer climate might be mediated through differential changes in N availability across soil age. We compared readily available [water-soluble NH₄ ⁺, NO₃ ^?, and amino acids (AA)], moderately available (soluble proteins), hydrolyzable, and total N pools across three tussock-tundra landscapes with soil ages ranging from 11.5k to 300k years. The effects of fertilization and warming on these N pools were also compared for the two younger sites. Readily available N was highest at the oldest site, and AA accounted for 80–89 % of this N. At the youngest site, inorganic N constituted the majority (80–97 %) of total readily available N. This variation reflected the large differences in plant functional group composition and soil chemical properties. Long-term (8–16 years) fertilization increased the soluble inorganic N by 20- to 100-fold at the intermediate-age site, but only by twofold to threefold at the youngest site. Warming caused small and inconsistent changes in the soil C:N ratio and AA, but only in soils beneath Eriophorum vaginatum, the dominant tussock-forming sedge. These differential responses suggest that the ecological consequences of warmer climates on these tundra ecosystems are more complex than simply elevated N-mineralization rates, and that the responses of landscapes might be impacted by soil age, or time since deglaciation.     

The dispersion of arctic breeding birds according to snow-free patch dimensions during the spring thaw in the north-eastern Taimyr Peninsula,Russia

 The dispersion of passerines, ptarmigan Lagopus mutus and waders in relation to available snow-free patches is described after spring arrival but prior to the main thaw at Pronchishcheva Lake, north-eastern Taimyr, in June 1991. The numbers of ptarmigan and passerines were proportional to patch perimeter but disproportionately more birds occurred on smaller patches. In contrast, wader numbers were proportional to patch area but disproportionately more occurred along the perimeters of large patches. These patterns are discussed in relation to risk of predation and food availability. We speculate that the predation risk is higher in small patches for uniformly coloured birds but may be lower for white and pied species. The availability of overwintering plants, fresh plant growth and insects is thought to be highest at the perimeters of snow-free patches. Received: 19 November 1993/Accepted: 4 September 1995     

Storage and mobility of black carbon in permafrost soils of the forest tundra ecotone in Northern Siberia

Boreal permafrost soils store large amounts of organic carbon (OC). Parts of this carbon (C) might be black carbon (BC) generated during vegetation fires. Rising temperature and permafrost degradation is expected to have different consequences for OC and BC, because BC is considered to be a refractory subfraction of soil organic matter. To get some insight into stocks, variability, and characteristics of BC in permafrost soils, we estimated the benzene polycarboxylic acid (BPCA) method‐specific composition and storage of BC, i.e. BPCA‐BC, in a 0.44 km²‐sized catchment at the forest tundra ecotone in northern Siberia. Furthermore, we assessed the BPCA‐BC export with the stream draining the catchment. The catchment is composed of various landscape units with south‐southwest (SSW) exposed mineral soils characterized by thick active layer or lacking permafrost, north‐northeast (NNE) faced mineral soils with thin active layer, and permafrost‐affected raised bogs in plateau positions showing in part thermokarst formation. There were indications of vegetation fires at all landscape units. BC was ubiquitous in the catchment soils and BPCA‐BC amounted to 0.6–3.0% of OC. This corresponded to a BC storage of 22–3440 g m^?2. The relative contribution of BPCA‐BC to OC, as well as the absolute stocks of BPCA‐BC were largest in the intact bogs with a shallow active layer followed by mineral soils of the NNE aspects. In both landscape units, a large proportion of BPCA‐BC was stored within the permafrost. In contrast, mineral soils with thick active layer or lacking permafrost and organic soils subjected to thermokarst formation stored less BPCA‐BC. Permafrost is, hence, not only a crucial factor in the storage of OC but also of BC. In the stream water BPCA‐BC amounted on an average to 3.9% of OC, and a yearly export of 0.10 g BPCA‐BC m^?2 was calculated, most of it occurring during the period of snow melt with dominance of surface flow. This suggests that BC mobility in dissolved and colloidal phase is an important pathway of BC export from the catchment. Such a transport mechanism may explain the high BC concentrations found in sediments of the Arctic Ocean.     

Growth and energetics of a small shorebird species in a cold environment: the little stint Calidris minuta on the Taimyr Peninsula, Siberia

The little stint Calidris minuta is one of the smallest shorebird species breeding in the Arctic (weighing 4.3  g on hatching). Their chicks are small and have a high surface area-to-volume ratio. We determined prefledging growth, energy expenditure and time budgets for little stint chicks in northwestern Taimyr, Siberia. A modified power curve was introduced to model the relationship between daily energy expenditure and body mass. Total metabolisable energy, TME, over the 15-d prefledging period was 107% greater than the allometric prediction for a bird the size of a little stint. Their growth rate coefficient was 14% greater than the prediction for a bird their size. The growth of young chicks was reduced in cool weather, possibly due to a reduction in foraging time in order to be brooded and reduced food availability which impact foraging efficiency. We did not detect weather effects on energy expenditure of chicks, but lack of temperature variation during energy expenditure measurements may have prevented this. In sum, both growth rate coefficient and energy expenditure of little stint chicks were greater than predicted and this is similar to that observed in other arctic shorebird species.     

Red fox takeover of arctic fox breeding den: an observation from Yamal Peninsula, Russia

Here, we report from the first direct observation of a red fox (Vulpes vulpes) intrusion on an arctic fox (Vulpes lagopus) breeding den from the southern Arctic tundra of Yamal Peninsula, Russia in 2007. At the same time, as a current range retraction of the original inhabitant of the circumpolar tundra zone the arctic fox is going on, the red fox is expanding their range from the south into arctic habitats. Thus, within large parts of the northern tundra areas the two species are sympatric which gives opportunities for direct interactions including interference competition. However, direct first-hand observations of such interactions are rare, especially in the Russian Arctic. In the present study, we observed one red fox taking over an arctic fox breeding den which resulted in den abandonment by the arctic fox. On July 19, eight arctic fox pups were observed on the den before the red fox was observed on the same den July 22. The pups were never seen at the den or elsewhere after the red fox was observed on the den for as long as we stayed in the area (until August 10). Our observation supports the view that direct interference with red fox on breeding dens may contribute to the range retraction of arctic foxes from the southern limits of the Arctic tundra in Russia.     

Shifts in ecological behaviour of herbaceous forest species along a transect from northern central to North Europe

We investigated the ecological behaviour (the response to environmental factors in the field, synonymous to the term realized niche) of four closely related species pairs (Melica nutans, M. uniflora; Primula veris, P. elatior; Veronica chamaedrys, V. montana; Viola riviniana, V. reichenbachiana) across a transect from northern Central to North Europe. The second-mentioned species of each pair is confined in its geographical distribution to the southern parts of the studied transect. Sample plot data of deciduous forests were compiled from (1) Germany, S Niedersachsen, (2) Germany, northern Schleswig-Holstein, (3) Denmark, and (4) Boreo-nemoral Sweden. We compared the ecological optima and amplitudes of the response curves of species along the gradients for moisture, pH and nitrogen by means of phytosociological data, detrended correspondence analysis (DCA) and Ellenberg indicator values. pH measurements from Sweden were significantly correlated with the corresponding DCA sample plot scores and the plot averages of the Ellenberg values for reaction (pH). In accordance with our main hypothesis, the wide range species appeared to have broader ecological amplitudes on the northern margins of their distributional ranges, especially in Boreo-nemoral Sweden, than in the southern parts of the study area. Our findings are in contrast to theories claiming a reduced niche breadth of range-margin populations of species compared to range-centre populations. The shifts in ecological behaviour were particularly obvious with respect to soil acidity. We believe that these shifts are caused by changes in the competitive relationships between the species: in the north, the total pool of species in deciduous forests is comparatively small. The low species richness is likely to lead to reduced competition and to an expansion of the ecological amplitude, known as competitive release.     

A comparison of bacterial and fungal biomass in several cultivated soils

Bacterial and fungal biomass was estimated in incubated samples of three cultivated soils, the influence of glucose, ammonium nitrate and cattle slurry on its formation being studied. The microbial biomass was determined in stained microscopic preparations of soil suspension. Bacterial biomass in the control samples was from 0.17 to 0.66 mg dry wt per 1 g dry soil and independently of the applied supplements was on the average two times larger in muck soils than in sand. Fungal biomass in the control soils ranged from 0.013 to 0.161 mg dry wt per 1 g dry soil, no relationship being found between its size and the soil type. As a result, the ratio of the size of fungal to bacterial biomass was dependent on the soil type; in sand the fungal biomass corresponded to 1/3 of the bacterial biomass, and in muck soils--only to 1/7.     

Biogeochemical pools and fluxes of carbon and nitrogen in a maritime tundra near penguin colonies along the Antarctic Peninsula

There is limited information regarding biogeochemical pools and fluxes in maritime tundra ecosystems along the Antarctic Peninsula. To collect baseline information on biogeochemical processes in a tundra ecosystem dominated by two vascular plant species (Colobanthus quitensis and Deschampsia antarctica) at Biscoe Point off the coast of Anvers Island, we measured pools and fluxes of C and N in transplanted tundra microcosm cores, complemented with sampling of precipitation and surface runoff. Snow and snowmelt from the tundra collection site and soil leachates from the cores were enriched with N and dissolved organic carbon compared to precipitation and snowmelt samples collected at Palmer Station, indicating high loading of N and organic matter from the penguin colonies adjacent to the tundra site. Relatively high values of δ¹⁵N in the live and dead biomass of D. antarctica and C. quitensis (5.6–25.1‰) indicated an enrichment of N in this tundra ecosystem, possibly through N inputs from adjacent penguin colonies. Stepwise multiple linear regressions found that ecosystem respiration and gross primary production were best predicted by live biomass of D. antarctica, suggesting a disproportionately high contribution of D. antarctica to CO₂ fluxes. The cores with higher δ¹⁵N and lower δ¹³C in the soil organic horizon exhibited higher CO₂ fluxes. The results suggest that abundant N inputs from penguin colonies and the competitive balance between plant species might play a critical role in the response of tundra ecosystems along the Antarctic Peninsula to projected climate change.