Synthesis and derivatization of halflanthanidocene aryl(alk)oxide complexes

The reaction of halflanthanidocene aryloxides Cp^R′Ln(OAr^tBu,R)₂ (Ln = Y, La, Lu; Cp^R′ = C₅Me₅, C₄Me₄H; R = H, Me) and halflanthanidocene alkoxides [(C₅Me₅)Ln(OCH₂CMe₃)₂]₂ (Ln = Y, Lu) with trimethylaluminum (TMA) was investigated. Monomeric Cp^R′Ln(OAr^tBu,R)₂, derived from the ortho-tBu-substituted OC₆H₂tBu₂-2,6-R-4 (R = H, Me) ligands, form mono(tetramethylaluminate) complexes Cp^R′Ln(OAr^tBu,R)(AlMe₄) for the smaller lanthanide metal centers yttrium and lutetium. Such an [aryloxide] → [aluminate] ligand exchange was not observed at the larger lanthanum metal center. The mobility of the tetramethylaluminate ligands of complexes Cp^R′Ln(OAr^tBu,R)(AlMe₄) (Ln = Y, Lu) was examined by variable-temperature (VT) ¹H NMR spectroscopy, revealing two signals for bridging and terminal methyl groups at lower temperatures. The treatment of complexes Cp^R′Ln(OAr^tBu,R)(AlMe₄) with donor solvent d₈-THF gave Cp^R′Ln(OAr^tBu,R)(Me)(d₈-THF)₂ (Ln = Y, Lu) with terminal methyl groups, according to a donor-induced aluminate cleavage reaction. Dimeric [(C₅Me₅)Ln(OCH₂CMe₃)₂]₂ (Ln = Y, Lu) was synthesized from (C₅Me₅)Ln(NiPr₂)₂(THF) and reacted with two equivalents of TMA per Ln center to yield monomeric bis(TMA) adduct complexes (C₅Me₅)Ln(OCH₂CMe₃)₂(AlMe₃)₂(Ln = Y, Lu). VT NMR spectroscopic studies confirmed a high mobility of the Ln(μ-OCH₂CMe₃)(μ-Me)AlMe₂ moieties at an ambient temperature. Both bis(TMA) adduct complexes were characterized by X-ray structure analysis.     

Experimental and DFT studies on the DNA-binding trend and spectral properties of complexes [Ru(bpy)2L] (L = dmdpq, dpq, and dcdpq)

The trend in DNA-binding affinities and the spectral properties of a series of Ru(II) polypyridyl complexes, [Ru(bpy)₂(dmdpq)]²⁺ (1), [Ru(bpy)₂(dpq)]²⁺ (2), [Ru(bpy)₂(cndpq)]²⁺ (3) (bpy = 2,2′-bipyridine; dpq = dipyrido[3,2-d:2′,3′-f]quinoxaline; dmdpq = di-methyl-dpq; dcdpq = di-cyano-dpq), have been experimentally and theoretically investigated. The DNA-binding constants K_b of the complexes were determined systematically with spectrophotometric titration. The density functional theory (DFT) and time-dependent DFT (TDDFT) calculations were carried out for these complexes. The experimental results show that these complexes bind to DNA in intercalation mode, and the order of their intrinsic DNA-binding constants K_b is K_b(1) < K_b(2) ? K_b(3). The substituents on the intercalative ligands of the complexes play a very important role in the control of DNA-binding affinities of the complexes, in particular, the stronger electron-withdrawing substituent (-CN) on the intercalative ligand can greatly improve the DNA-binding property of the derivative complex. The trend in DNA-binding affinities as well as the spectral properties of metal-ligand charge-transition (¹MLCT) of this series of complexes can be reasonably explained by applying the DFT and TDDFT calculations and the frontier molecular orbital theory.     

Titanocene complexes with nonlinear pseudohalide ligands: Synthesis, spectroscopic characterization and crystal structure

Binuclear titanocene complexes [Cp₂Ti(tcm)]₂O (4), [Cp₂Ti(dca)]₂O (5) and [Cp₂Ti(dcnm)]₂O (6) (tcm⁻ = tricyanomethanide, dca⁻ = dicyanamide and dcnm⁻ = dicyanonitrosomethanide) were synthesized in moderate yields by the reaction of Cp₂TiCl₂ (1) with respective alkali metal pseudohalide salts in the aqueous solution. When the reaction was carried out in dry organic solvents, mononuclear compounds Cp₂Ti(tcm)₂ (2) and Cp₂Ti(dca)₂ (3) were isolated. Preparation of dipseudohalide complex Cp₂Ti(dcnm)₂ by this manner was unsuccessful due to decomposition of dcnm ligand resulting in formation of oxygen-bridged compound 6. All prepared compounds were characterized by elemental analysis, NMR, Raman, infrared and UV-Vis spectroscopy. Molecular structures of 2, 4 and 6 (two polymorphs) have been determined by single-crystal X-ray diffraction analysis.     

Structures and excitation energies of ozone-water clusters O3(H2O)n (n = 1-4)

Hybrid density functional theory (DFT) and time-dependent DFT (TD-DFT) calculations have been carried out for ozone-water clusters O₃(H₂O)_n (n = 1-4) in order to obtain hydration effects on the absorption spectrum of ozone. The first water molecule in n = 1 is bound to the ozone molecule by an oxygen orientation form in which the oxygen atom of H₂O orients the central oxygen atom of O₃. In n = 2, the water dimer is bound to O₃ and then the cyclic structure is formed as the most stable structure. For n = 3 (or n = 4), the cyclic water trimer (or tetramer) is bound by a hydrogen bond to the ozone molecule. The TD-DFT calculations of O₃(H₂O)_n (n = 0-4) show that the first and second excitation energies of O₃ are blue-shifted by the interaction with the water clusters. The magnitude of the spectral shift is largest in n = 2, and the shifts of the excitation energies are +0.07 eV for S₁ and +0.13 eV for S₂ states. In addition to the spectral shifts (S₁ and S₂ states), it is suggested that a charge-transfer band is appeared as a low-lying excited state above the S₁ and S₂ states. The origin of the spectrum shifts was discussed on the basis of theoretical results.     

Theoretical study on the interaction of titanocene dichloride with deoxyguanosine monophosphate

The completely hydrolyzed titanocene dichloride, [Cp₂Ti(H₂O)₂]²⁺ binding to guanine (G) and phosphate group sites of DNA were investigated by DFT method, with using deoxyguanosine monophosphate (dGMP) as incoming ligand. In the first substitutions, the calculations reveal that the diaquated titanocene binding to O6 shows the lowest activation free energy with 17.9 kcal/mol, closely followed by N7 is 20.5 kcal/mol and the O of phosphate group is 26.3 kcal/mol, respectively. It was also found that all the titanation processes are mildly endothermic. In addition, for the Ti-B(dGMP) in all separated products, the bond dissociation free energies (BDFE) of Ti-O(P, P = phosphate) is higher than those of Ti-N7/O6. In the second substitutions, the reactions leading to the didentate adducts are considered. For bidentate-bridging N7, O6 binding mode, the path of the metal Ti binding to O6 has the lower activation free energy (11.3 kcal/mol) than that of the metal Ti binding to N7 (15.3 kcal/mol). For the bidentate-bridging N7, O(P) binding mode, the path of the metal Ti binding to O(P) has the lower activation free energies (25.3 kcal/mol) than that of the metal Ti binding to N7 (26.2 kcal/mol).     

Octahedral (cyclopentadienyl)rhodium clusters [Rh6Cp6(μ6-C)] and [Rh6Cp6(μ3-CO)2]: Synthesis, structures and electrochemistry

The 86-electron dicationic octahedral rhodium clusters containing Cp (Cp = C₅H₅) ligands and either an interstitial carbon atom, [Rh₆Cp₆(μ₆-C)]²⁺ ([1]²⁺), or two carbonyl groups, [Rh₆Cp₆(μ₃-CO)₂]²⁺ ([2]²⁺), were synthesized in low yields by reactions of Rh₃Cp₃(μ-CO)₃ with RhCp(C₂H₄)₂ or [RuCp^∗(MeCN)₃]⁺ (Cp^∗ = C₅Me₅), respectively. The structures of [1]²⁺ and [2]²⁺ were determined by X-ray diffraction. Their electrochemical behavior proved that they possess a rather extended electron transfer activity. In accordance with DFT calculations, the nearly octahedral structure of [1]²⁺ and [2]²⁺ is retained both upon oxidation (2+/3+) and the first reduction (2+/+); however, the second reduction (+/0) results in the breaking of one (for [1]⁰) or two (for [2]⁰) Rh-Rh bonds. In the case of the related Dahl’s nickel cluster Ni₆Cp₆ the nearly octahedral structure is retained upon all redox steps (3+/2+/+/0/−/2−).     

Synthesis, characterization, and C-H/C-C cleavage reactions of two rhodium-trispyrazolylborate dihydrides

Treatment of Tp′Rh(PMe₃)Cl₂ and Tp′Rh(CNCH₂CMe₃)Cl₂ with Cp₂ZrH₂ produces Tp′Rh(PMe₃)H₂ and Tp′Rh(CNCH₂CMe₃)H₂, respectively, in excellent yield. Photolysis of benzene solutions of each dihydride complex generates hydrogen and the fragment [Tp′Rh(L)] which inserts into the solvent C-H bond. The phosphine dihydride has also been shown to be a catalyst for the hydrogenation of biphenylene, showing a capability to cleave C-C bonds. Reductive elimination of benzene from Tp′Rh(PMe₃)PhH is nearly 250 times slower than from Cp*Rh(PMe₃)PhH.     

Effects of local protein environment on the binding of diatomic molecules to heme in myoglobins. DFT and dispersion-corrected DFT studies

The heme-AB binding energies (AB = CO, O₂) in a wild-type myoglobin (Mb) and two mutants (H64L, V68N) of Mb have been investigated in detail with both DFT and dispersion-corrected DFT methods, where H64L and V68N represent two different, opposite situations. Several dispersion correction approaches were tested in the calculations. The effects of the local protein environment were accounted for by including the five nearest surrounding residues in the calculated systems. The specific role of histidine-64 in the distal pocket was examined in more detail in this study than in other studies in the literature. Although the present calculated results do not change the previous conclusion that the hydrogen bonding by the distal histidine-64 residue plays a major role in the O₂/CO discrimination by Mb, more details about the interaction between the protein environment and the bound ligand have been revealed in this study by comparing the binding energies of AB to a porphyrin and the various myoglobins. The changes in the experimental binding energies from one system to another are well reproduced by the calculations. Without constraints on the residues in geometry optimization, the dispersion correction is necessary, since it improves the calculated structures and energetic results significantly.     

Water-controlled reactions selectivity of the ReOCl3(OPPh3)(SMe2) synthon with a hydrophosphorane ligand

The reaction of the hydrospirophosphorane HP(OCMe₂CMe₂O)₂ ligand or the five-membered cyclic hydrogen phosphonate HP(O)(OCMe₂CMe₂O) ligand with the ReOCl₃(OPPh₃)(SMe₂) precursor under controlled reaction conditions led to the isolation of dimeric oxo-rhenium(V) complexes containing P(O)(OCMe₂CMe₂O)⁻ moieties, represented by [ReOCl₂{μ-OP(OCMe₂CMe₂O)}₃ReOCl(OPPh₃)] (1) and [ReOCl₂(SMe₂){μ-OP(OCMe₂CMe₂O)}]₂ (2). The chemical composition of these complexes was established by means of NMR, IR spectroscopic methods, and based on analytical data. The relative stereochemistry of 1 and 2 was unambiguously determined by single X-ray diffraction studies. The crystal structure of 1 comprises two crystallographically independent molecules in an asymmetric unit and co-crystallised molecules of both dichloromethane and acetonitrile. Two different six-coordinated monomeric subunits, ReOCl₂ and ReOCl(OPPh₃), connected by three phosphonate bridges, build up the dinuclear complex 1. It exhibits an uncommon feature, a cis disposition of the triphenylphosphine oxide molecule relative to the terminal ReO bond. The crystal structure of 2 includes four molecules, in which two equivalent rhenium subunits ReOCl₂(SMe₂) are linked by two P(O)(OCMe₂CMe₂O)⁻ bridges.     

Electronic circular dichroism of monomethyl [O, O, O]-phosphate and [O, O, O]-thiophosphate revisited

Phosphoryl-transfer reactions have long been of interest due to their importance in maintaining numerous cellular functions. A phosphoryl-transfer reaction results in two possible stereochemical outcomes: either retention or inversion of configuration at the transferred phosphorus atom. When the product is phosphate, isotopically-labeled [¹⁶O, ¹⁷O, ¹⁸O]-phosphate derivatives can be used to distinguish these outcomes; one oxygen must be replaced by sulfur or esterified to achieve isotopic chirality. Conventionally, stereochemical analysis of isotopically chiral phosphate has been based on ³¹P NMR spectroscopy and involves complex chemical or enzymatic transformations. An attractive alternative would be direct determination of the enantiomeric excess using chiroptical spectroscopy. (S)-Methyl-[¹⁶O, ¹⁷O, ¹⁸O]-phosphate (MePi^∗), 7 and enantiomeric [¹⁶O, ¹⁷O, ¹⁸O]-thiophosphate (TPi^∗), 10, were previously reported to exhibit weak electronic circular dichroism (ECD), although with 10 the result was considered to be uncertain. We have now re-examined the possibility that excesses of 7 and 10 enantiomers can be detected by ECD spectrometry, using both experimental and theoretical approaches. 7 and both the (R) and (S) enantiomers of 10 (10a, 10b) were synthesized by the ‘Oxford route’ and characterized by ¹H, ³¹P and ¹⁷O NMR, and by MS analysis. Weak ECD could be found for 7, with suboptimal S/N. No significant ECD could be detected for the 10 enantiomers.Time-dependent DFT (TDDFT) calculations of the electronic excitation energies and rotational strengths of the same three enantiomers were carried out using the functional B3LYP and the basis set 6-311G^∗∗. The isotopically-perturbed geometries were predicted using the anharmonic vibrational frequency calculational code in GAUSSIAN 03. In the case of 10, calculations were also carried out for the hexahydrated complex to investigate the influence of the aqueous solvent. The predicted excitation wavelengths are greater than the observed wavelengths, a not unusual result of TDDFT calculations. The predicted anisotropy ratios are 2.9 × 10⁻⁵ for 7, −5.3 × 10⁻⁶ for 10a/b, and 1.7 × 10⁻⁶ for 10a/b⋅(H₂O)₆. For 7 the predicted anisotropy ratio approximates that observed in this work, 4.5 × 10⁻⁵ at 208 nm. For 10a/b, the upper limits of the experimental anisotropy ratios (<5 × 10⁻⁶ at 225 nm, pH 9; <5 × 10⁻⁶ at 236 nm, pH 12) are comparable to the predicted magnitude of the value for 10a/b. The lower predicted value for 10a/b · (H₂O)₆ suggests that the aqueous environment affects the ECD significantly. Altogether, the TDDFT calculations together with a stereochemical analysis based on NMR and the MS data support the conclusion that the experimental ECD results for MePi^∗ and TPi^∗ may be reliable in order of magnitude.     

Palladium complexes with hydrophosphorane ligands (HP∼O and HP∼N), catalysts for Heck cross-coupling reactions

The synthesis and structural characterization of palladium complexes 1-3 incorporating H-spirophosphorane HP(OCMe₂CMe₂O)₂ and H-phosphonate congener HP(O)(OCMe₂CMe₂O) ligands are reported. The chemical composition of the complexes [PdCl(μ-Cl){P(OCMe₂CMe₂O)OCMe₂CMe₂OH}]₂ (1), [Pd{P(O)(OCMe₂CMe₂O)}₂]_n (2), and [Pd(μ-Cl){P(OCMe₂CMe₂O)OH}{P(OCMe₂CMe₂O)O}]₂ (3) was established by means of NMR, IR, ESI-MS spectroscopic methods. The relative stereochemistry of 1 and 3 was unambiguously determined by single X-ray diffraction studies. It was proved that complexes 1-3, and complex [PdCl₂P(OCH₂CMe₂NH)OCH₂CMe₂NH₂] (4) previously described in the literature, are very efficient catalysts for the Heck cross-coupling of bromobenzene with n-butyl acrylate. Moreover, they were also found to be effective catalysts in the stereoselective synthesis of trans-stilbenes.     

A new precursor for organo-osmium complexes

The use of potassium osmate, K₂[OsO₂(OH)₄], as a precursor for some cyclopentadienyl-osmium complexes is described. The X-ray structures of OsBr(PPh₃)₂Cp, OsCl(dppe)Cp and OsX(dppe)Cp^∗ (X = Cl, Br) are reported.     

Calculations of the C<Subscript>2</Subscript> fragmentation energies of higher fullerenes C<Subscript>80</Subscript> and C<Subscript>82</Subscript>

The C₂ fragmentation energies of the most stable isolated-pentagon-rule (IPR) isomers of the C₈₀ and C₈₂ fullerenes were evaluated with second-order Møller-Plesset (MP2) theory, density-functional theory (DFT) and the semiempirical self-consistent charge density-functional tight-binding (SCC-DFTB) method. Zero-point energy, ionization energy and empirical C₂ corrections were included in the calculation of fragmentation energies for comparison with experimental C₂ fragmentation energies of the fullerene cations. In the case of the most probable Stone-Wales pathway of C₂ fragmentation of C₈₀, the calculated \(D_{0} {\left( {{\text{C}}_{{{\text{80}}}} ^{ + } } \right)}\) agree well with experimental data, whereas in the case of C₈₂ fragmentation, the calculated \(D_{0} {\left( {{\text{C}}_{{{\text{82}}}} ^{ + } } \right)}\) exceed by up to 1.2 eV the experimental ones, which suggests that other IPR isomers may be present in sufficient amounts in experimental samples. Computer-intensive MP2 calculations and DFT calculations with larger basis sets do not yield much improved C₂ fragmentation energies, compared to those reported earlier with B3LYP/3-21G. On the other hand, semiempirical approaches such as SCC-DFTB, which are orders of magnitude less intensive, yield satisfactory fragmentation energies for higher fullerenes and may become a method of choice for routine calculations of fullerenes and carbon nanotubes.

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Figure C₂ fragmentation energies of C₈₀ and C₈₂ fullerenes have been calculated with B3LYP/6-31G* model chemistry, with semiempirical self-consistent-charge density-functional tight-binding (SCC-DFTB) method and with the more rigorous MP2 method. The influence of basis set extension and level of theory on the resulting fragmentation energies is discussed

     

Linkage isomerism of pentaammine(dimethylsulfoxide)ruthenium(II/III) complexes: A theoretical study

Density functional theory (DFT) calculations have been performed for understanding the linkage isomerism of [Ru^II/III(NH₃)₅(dmso)]^2+/3+ (dmso = dimethylsulfoxide) from a theoretical point of view. In particular, we focus on the interchange between O-bonded and S-bonded structures of the dmso ligand by oxidation/reduction. We have examined five different exchange-correlation functionals (SVWN, BP86, mPWPW91, B3PW91, and B3LYP) in our DFT calculations and found that the relative stabilities of the O-bonded and S-bonded structures are largely dependent on the functional employed. From detailed analyses of atomic charge distributions, it has been found that the calculated atomic charges on the central metal ions are strongly correlated with the relative energies. We also studied the effect of solvation on the linkage isomerism using continuum solvation models.     

{Ru-NO} and {Ru-NO} configurations in [Ru(trpy)(tmp)(NO)] (trpy = 2,2:6′,2′′-terpyridine, tmp = 3,4,7,8-tetramethyl-1,10-phenanthroline): An experimental and theoretical investigation

The ruthenium-nitrosyl complexes [Ru^II(trpy)(tmp)(NO⁺)](ClO₄)₃ ([4](ClO₄)₃) and [Ru^II(trpy)(tmp)(NO)](ClO₄)₂ ([5](ClO₄)₂) with {Ru-NO}⁶ and {Ru-NO}⁷ configurations, respectively (trpy = 2,2′:6′,2′′-terpyridine, tmp = 3,4,7,8-tetramethyl-1,10-phenanthroline) have been isotaled. The nitrosyl complexes [4]³⁺ and [5]²⁺ have been generated by following a stepwise synthetic procedure: [Ru^II(trpy)(tmp)(X)]ⁿ, X/n = Cl/+ (1⁺) → CH₃CN/2+ (2²⁺) → NO₂/+ (3⁺) → NO⁺/3+ (4³⁺) → NO/2+ (5²⁺). The single-crystal X-ray structures of two precursor complexes [1]ClO₄ and [3]ClO₄ have been determined. The DFT optimized structures of 4³⁺ and 5²⁺ suggest that the Ru-N-O geometries in the complexes are linear (177.9°) and bent (141.4°), respectively. The nitrosyl complexes with linear (4³⁺) and bent (5²⁺) geometries exhibit ν(NO) frequencies at 1935 cm⁻¹ (DFT: 1993 cm⁻¹) and 1635 cm⁻¹ (DFT: 1684 cm⁻¹), respectively. Complex 4³⁺ undergoes two successive reductions at 0.25 V (reversible) and −0.48 V (irreversible) versus SCE involving the redox active NO function, Ru^II-NO⁺ ? Ru^II-NO and Ru^II-NO → Ru^II-NO⁻, respectively, besides the reductions of trpy and tmp at more negative potentials. The DFT calculations on the optimized 4³⁺ suggest that LUMO and LUMO+1 are dominated by NO⁺ based orbitals of around 65% contribution along with partial metal contribution of ∼25% due to (dπ)Ru^II → π∗(NO⁺) back-bonding. The lowest energy transitions in 4³⁺ and 5²⁺ at 360 nm and 467 nm in CH₃CN (TD-DFT: 364 and 459 nm) have been attributed to mixed MLLCT transitions of tmp(π) → NO⁺(π∗), Ru(dπ)/tmp(π) → NO⁺(π^∗) and Ru(dπ)/NO(π) → trpy(π^∗), respectively. The paramagnetic reduced species 5²⁺ exhibits an anisotropic EPR spectrum with g₁ = 2.018, g₂ = 1.994, g₃ = 1.880 (〈g〉 = 1.965 and Δg = 0.138) in CH₃CN, along with ¹⁴N (I = 1) hyperfine coupling constant, A2 = 35 G at 110 K due to partial metal contribution in the singly occupied molecular orbital (DFT:SOMO:Ru (34%) and NO (53%)). Consequently, Mulliken spin distributions in 5²⁺ are calculated as 0.115 for Ru and 0.855 for NO (N, 0.527; O, 0.328). The reaction of moderately electrophilic nitrosyl center in 4³⁺ with the nucleophile, OH⁻ yields the nitro precursor, 3⁺ with the second-order rate constant value of 1.7 × 10⁻¹ M⁻¹ s⁻¹ at 298 K in CH₃CN-H₂O (10:1). On exposure to light (Xenon 350 W lamp) both the nitrosyl species, 4³⁺ ({Ru^II-NO⁺}) and 5²⁺ ({Ru^II-NO}) undergo photolytic Ru-NO bond cleavage process but with a widely varying k_NO, s⁻¹ (t_1/2, s) of 1.56 × 10⁻¹(4.4) and 0.011 × 10⁻¹(630), respectively.     

Synthesis, characterization, structures and DNA-binding properties of complexes [Ru(bpy)2(L)] (L = ptdb, ptda and ptdp) with asymmetric intercalative ligands

A series of Ru(II) polypyridyl complexes [Ru(bpy)₂(ptdb)](ClO₄)₂ (1), [Ru(bpy)₂(ptda)](ClO₄)₂ (2) and [Ru(bpy)₂(ptdp)](ClO₄)₂ (3) with asymmetric intercalative ligands have been synthesized and characterized by EA, mass spectra, ¹H NMR and cyclic voltammetry. The crystal structure of complex 1 has been determined. The DNA-binding properties of the complexes were investigated by absorption titration, luminescence spectroscopy and viscosity measurements. The experimental results suggest that all these complexes bind to DNA in an intercalation mode. The results also show that the order of DNA-binding affinities (A) of this series of complexes is A(1) < A(2) < A(3). It is further confirmed that a ligand planarity of the complexes is a very important factor in affecting the DNA-binding behaviors of such complexes. Theoretical studies for these complexes were also carried out with the density functional theory (DFT) method. The trend in the DNA-binding affinities of this series of complexes can be reasonably explained by the synthetical considerations of the calculated planarity of intercalative ligands, some frontier molecular orbital energies of the complexes and the planarity area (S) of the intercalative ligands.     

Antitumor activity of bent metallocenes: electronic structure analysis using DFT computations

The antitumor activities of bent metallocenes [Cp–M–Cp]²⁺ (M = Ti, V, Nb, Mo) and complexes of them with guanine, adenine, thymine and cytosine nucleotides have been probed using electronic structure calculations. DFT/BP86 calculations have revealed that the bent metallocene–nucleotide interaction strongly depends on the stability of the hydrolyzed form of the bent metallocene dichloride [Cp₂M]²⁺ species, and in turn the stability of the [Cp₂M]²⁺ species strongly depends on the electronic structure of [Cp₂M]²⁺. Detailed electronic structure and Walsh energy analyses have been carried out for the hydrolyzed forms of four [Cp–M–Cp]²⁺ (M = Ti, V, Nb, Mo) species to find out why the bent structure is unusually stable. Energy changes that occur during the bending process in frontier molecular orbitals as well as the p(π)–d(π) overlap have been invoked to account for the anticipated antitumor activities of these species. The bonding situation and the interactions in bent metallocene–nucleotide adducts were elucidated by fragment analysis. Of the four nucleotides complexed with the four bent metallocenes, adenine and guanine show better binding abilities than the other two nucleotides. Metallocenes of second-row transition metals exhibit better binding with pyrimidine-base nucleotides. In particular, the Lewis acidic bent metallocenes interact strongly with nucleotides. The antitumor activity is directly related to the binding strength of the bent metallocene with nucleotide adducts, and the computed interaction energy values correlate very well with the experimentally observed antitumor activities.     

QM/MM theoretical study of the pentacoordinate Mn(III) and resting states of manganese-reconstituted cytochrome P450<Subscript>cam</Subscript>

Quantum mechanical/molecular mechanical (QM/MM) theoretical calculations were performed for the pentacoordinate Mn(III) and water-bound resting states of the Mn-reconstituted mutant of cytochrome P450_cam (Mn-P450_cam) in order to obtain insights into their characters, especially, their spin state ordering. The QM/MM study was carried out by use of the B3LYP and BLYP density functional theory (DFT) methods coupled to the CHARMM force field. Although the relative energies of possible spin states for the Mn-P450_cam species varied depending on the functional, this dependence was less significant compared with previous calculations on the corresponding intermediates of wild-type P450_cam. The results suggested that both Mn-P450_cam intermediates have quintet ground states. Additional time-dependent DFT (TDDFT) calculations were carried out for the quintet states of these species using the B3LYP and BP86 functionals with the electrostatic environmental effect included. The TDDFT results enabled us to assign the origins of the peaks observed in optical absorption spectra (Makris et al. in J. Inorg. Biochem. 100:507–518, 2006). Electronic supplementary material The online version of this article (doi:) contains supplementary material, which is available to authorized users.     

Sub‐6 nm Fully Ordered L10‐Pt–Ni–Co Nanoparticles Enhance Oxygen Reduction via Co Doping Induced Ferromagnetism Enhancement and Optimized Surface Strain

Engineering the crystal structure of Pt–M (M = transition metal) nanoalloys to chemically ordered ones has drawn increasing attention in oxygen reduction reaction (ORR) electrocatalysis due to their high resistance against M etching in acid. Although Pt–Ni alloy nanoparticles (NPs) have demonstrated respectable initial ORR activity in acid, their stability remains a big challenge due to the fast etching of Ni. In this work, sub‐6 nm monodisperse chemically ordered L1₀‐Pt–Ni–Co NPs are synthesized for the first time by employing a bifunctional core/shell Pt/NiCoO_x precursor, which could provide abundant O‐vacancies for facilitated Pt/Ni/Co atom diffusion and prevent NP sintering during thermal annealing. Further, Co doping is found to remarkably enhance the ferromagnetism (room temperature coercivity reaching 2.1 kOe) and the consequent chemical ordering of L1₀‐Pt–Ni NPs. As a result, the best‐performing carbon supported L1₀‐PtNi_0.8Co_0.2 catalyst reveals a half‐wave potential (E_1/2) of 0.951 V versus reversible hydrogen electrode in 0.1 m HClO₄ with 23‐times enhancement in mass activity over the commercial Pt/C catalyst along with much improved stability. Density functional theory (DFT) calculations suggest that the L1₀‐PtNi_0.8Co_0.2 core could tune the surface strain of the Pt shell toward optimized Pt–O binding energy and facilitated reaction rate, thereby improving the ORR electrocatalysis.