The formation and isolation of benzisothiazole rings from the reactions of oxime-thiophenolate ligands

The reaction of [Ni(eftp)] [eftp = N,N-ethylene(6-formyl-4-methyliminatothiophenolato)] with hydroxylamine hydrochloride in the presence of potassium acetate in MeOH resulted in the formation of [Ni(L)₂], L = 2-mercapto-5-methyl-3-({2-[(5-methyl-benzo[d]isothiazol-7-ylmethylene)-amino]-ethylimino}-methyl)-benzonitrile. A single-crystal X-ray diffraction structural determination showed that the oxime groups of the proposed new binucleating ligand had reacted to produce a nitrile and an isothiazole ring, while two ligand molecules combined with one Ni(II) ion to form a new complex with a cis-S₂N₂ square-planar geometry. Also, the reaction of 2,6-diformyl-4-methylphenyl disulfide with hydroxylamine in MeCN resulted in the synthesis of 5-methyl-2-oxy-benzo[d]isothiazole-7-carbaldehyde oxime, where an isothiazole ring had formed via the cleavage of the disulfide bond. Again, a single-crystal X-ray diffraction study confirmed the presence of a benzisothiazole product.     

Experimental and computational studies of two new mono- and dinuclear iridium complexes containing a Buchwald biphenyl phosphine ligand

The reaction of [(η⁴-1,5-C₈H₁₂)₂Ir₂(μ-Cl)₂] with 2-di-t-butylphosphino-2′-methylbiphenyl (t-Bu₂Pbiph^Me) in the presence of AgBF₄ afforded the dichlorido-bridged Ir–Ag complex [(η⁴-1,5-C₈H₁₂)Ir(μ-Cl)₂Ag(t-Bu₂Pbiph^Me)] (1) which was fully characterized by a single crystal X-ray diffraction study. Sequential treatment of the diiridium precursor first with the silver salt and then with the phosphine yielded cyclometalated [(η⁴-1,5-C₈H₁₂)Ir(t-Bu₂Pbiph^Me–H⁺)] (2). Detailed DFT calculations gave evidence that the phosphine ligand of 2 forms a strained four-membered iridaheterocycle through orthometalation rather than a sterically congested six-membered chelate structure through C–H activation on the remote phenyl ring. The phosphonium salt [t-Bu₂P(H)biph^Me]BF₄ was isolated as a by-product of the preparations of 1 and 2; its crystal structure was determined.     

A model study of alternative approach toward a class of palladium(II) based self-assembly

A different approach developed for the preparation of palladium(II) based complexes [(Pd(bpy))_x(L)_y](NO₃)_2x is modelled by using 4-phenylpyridine as ligand (L = 1). Various solvent systems are inspected to optimize the reaction condition for the preparation of the model complex [Pd(bpy)(4-phenylpyridine)₂](NO₃)₂. The model complex is obtained quantitatively as a single product from a 1:1:2 mixture of Pd(NO₃)₂, 2,2′-bipyridine and 4-phenylpyridine when stirred at room temperature in CH₃CN:H₂O (1:1). The same reaction is performed in CD₃CN:D₂O (1:1) to monitor the progress of the reaction by recording ¹H NMR. The kinetic products that formed initially got self-healed to give the desired product with in 6 h. However, in DMSO-d₆ spontaneous arrangement leading to the targeted complex was observed and no kinetic product could be detected. When a similar reaction is performed with ethylenediamine instead of 2,2′-bipyridine a mixture of compounds are observed. Theoretical calculation throws some light on the principle behind the success of this method for the bpy based systems. The assembly, [Pd(bpy)(4-phenylpyridine)₂](NO₃)₂ has been characterised by NMR, ESI-MS and single-crystal X-ray diffraction methods.     

Synthesis and in vitro evaluation of palladium(II) salicylaldiminato thiosemicarbazone complexes against Trichomonas vaginalis

Eight mononuclear Pd(II) complexes containing salicylaldiminato thiosemicarbazones (saltsc-R; where R = H (1), 3-OMe (2), 3-^tBu (3) and 5-Cl (4)) as dinegative tridentate ligands were prepared by the reaction of the corresponding thiosemicarbazone with the precursor Pd(L)₂Cl₂ (L = phosphatriazaadamantane or 4-picoline) in the presence of a weak base. These complexes (9-16) were characterised by a range of spectroscopic and analytical techniques including NMR spectroscopy and X-ray diffraction. These complexes along with four other Pd(II) analogues (5-8) were screened for activity in vitro against the Trichomonas vaginalis parasite. Preliminary results show that the type of ancillary ligand as well as the substituents on the aromatic ring of the salicylaldiminato thiosemicarbazone ligand influences the antiparasitic activity of these complexes.     

Palladium(II) amido complexes with an unsymmetrical PNP′ pincer-type coordination and a new (E,E)-tetradentate diphosphinoazine coordination mode

Cationic palladium(II) complexes [PdCl{PR₂CH₂C(Bu^t)NNC(Bu^t)CH₂PR₂}]Cl, where R = isopropyl, cyclohexyl or tert-butyl, were synthesized by the reactions of the corresponding diphosphinoazines with bis(acetonitrile)palladium(II) dichloride. When bis(benzonitrile)palladium(II) dichloride was used instead, in the molar ratio of 2:1 to the diphosphinoazine, a new complex was isolated with the isopropyl ligand showing a previously unknown (E,E) tetradentate coordination mode. Crystal and molecular structure was determined by X-ray diffraction. The solid complex was a racemate of two axially chiral enantiomers and the chirality was preserved in solution. Reactions of the cationic complexes with triethylamine gave complexes [PdCl{PR₂CHC(Bu^t)NNC(Bu^t)CH₂PR₂}], containing deprotonated diphosphinoazines in ene-hydrazone unsymmetrical pincer-like configuration. The complexes represent several of the still rare examples of Pd(II) amido bis(phosphine) complexes with a chlorine atom covalently bonded trans to the amide nitrogen.     

Hyponitrite complexes: Crystal and molecular structure of [Ru2(CO)4(μ-PBu2)(μ-Ph2PCH2PPh2)(μ-η-ONNOMe)]

The new trans-hyponitrite derivative complex [Ru₂(CO)₄(μ-P^tBu₂)(μ-dppm)(μ-η²-ONNOMe)] (2, dppm = Ph₂PCH₂PPh₂) was prepared by deprotonation of [Ru₂(CO)₄(μ-H)(μ-P^tBu₂)(μ-dppm)(μ-η²-ONNOMe)][BF₄] (1) with the base DBU (1.8-diazabicyclo[5.4.0]undec-7-ene). The latter complex salt has been obtained in an improved synthesis starting from the trans-hyponitrite complex [Ru₂(CO)₄(μ-H)(μ-P^tBu₂)(μ-dppm)(μ-η²-ONNO)]. Compound 2 has been characterized by spectroscopic methods as well as by X-ray diffraction and represents the first neutral complex bearing a deprotonated monoester of the hyponitrous acid as the bridging ligand.     

Reactions and structures in the gallium(III)/indium(III)-N,N-dimethylthioformamide systems

The structure of the N,N-dimethylthioformamide (DMTF) solvated gallium(III) ion has been determined in solution by means of extended X-ray absorption fine structure (EXAFS) spectroscopy. The gallium(III) ion is four-coordinate in tetrahedral fashion with a mean Ga-S bond distance of 2.233(2) Å in DMTF solution. At the dissolution of indium(III) perchlorate or trifluoromethanesulfonate in DMTF coordinated solvent molecules are partly reduced to sulfide ions, and a tetrameric complex with the composition [In₄S₄(SHN(CH₃)₂)₁₂]⁴⁺ is formed. The structure of the solid tetrameric complex in the perchlorate salt was solved with single crystal X-ray diffraction. Four indium(III) ions and four sulfide ions form a highly symmetric heterocubane structure where each indium binds three bridging sulfide ions and each sulfide ion binds three indium(III) ions with a mean In-S bond distance of 2.584(1) Å, and S-In-S angles of 90.3(1)°. Each indium(III) additionally binds three DMTF molecules at significantly longer mean In-S bond distance, 2.703(1) Å; the S-In-S angles are in the range 80.3-90.4°. Large angle X-ray scattering data on a DMTF solution of indium(III) trifluoromethanesulfonate show that the same tetrameric species characterized in the solid state is also present in solution, whereas the EXAFS measurements only give information about the In-S bond distances due to the short core hole lifetime.     

A pyridine bridged dicarbene ligand and its silver(I) and palladium(II) complexes: synthesis, structures, and catalytic applications

The potentially tridentate ligand 2,6-bis[(3-methylimidazolium-1-yl)methyl]pyridine dibromide reacts readily with silver(I) oxide in dichloromethane or dimethylsulfoxide to give a dinuclear silver(I)-carbene complex that was isolated as the tetrafluoroborate salt. Single crystal X-ray crystallography shows that each silver(I) ion is bridged by two ligands bonding through the carbene donors. Treatment of the silver(I) complex with suitable palladium(II) precursors gave the complexes PdCl[(CNC)]BF₄ and [PdMe(CNC)]BF₄ (CNC=2,6-bis[(3-methylimidazolin-2-yliden-1-yl)methyl]pyridine), in which the pyridyl and both carbene moieties are coordinated to a single palladium(II). The palladium(II) complexes have been fully characterised, including X-ray crystallography, and exhibit good activities in the Heck coupling reaction of 4-bromoacetophenone and n-butyl acrylate.     

Gold(I) alkynyl complexes containing a flexible, biphenyl-derived bis(alkyne)

2,2′-Diethynylbiphenyl was prepared in a three step sequence from commercially available 2,2′-bis(bromomethyl)biphenyl and subsequently reacted with the phosphinegold(I) complexes [AuCl(P)] (P = PEt₃, PCy₃, P^tBu₃, PPh₃, PTA) in the presence of base to give the bis(alkynyl) gold(I) complexes [(P)Au(deb)Au(P)] in good yields as air-stable solids. The compounds were fully characterized spectroscopically and the solid state structures of 2,2′-diethynylbiphenyl as well as the PEt₃ complex were determined by X-ray diffraction. Both solution and solid-state luminescence spectra of the gold complexes were recorded.     

Crystal structure and chemical oxidation of the palladium(II) cyclam complex within the cavity of cucurbit[8]uril

Inclusion compound of a macrocyclic cavitand cucurbit[8]uril (C₄₈H₄₈N₃₂O₁₆, CB[8]) with a square-planar palladium(II) complex of a polyamine ligand cyclam, {[Pd(cyclam)]@CB[8]}Cl₂·16?H₂O (1), was synthesized and characterized by X-ray crystallography, elemental analysis, IR, and electrospray ionization (ESI) mass spectrometry. The complex [Pd(cyclam)]²⁺ undergoes chemical oxidation within the CB[8] cavity leading to the formation of the palladium(IV) inclusion compound {trans-[Pd(cyclam)Cl₂]@CB[8]}Cl₂·14H₂O (2). The Pd(II) and Pd(IV) complexes are completely encapsulated within the CB[8] cavity. The cyclam ring in 1 and 2 adopts the most stable configuration (trans-III (S,S,R,R)).     

Oligonuclear nickel(II) complexes sustained by intermolecular hydrogen-bonding

Reaction of Ni(OAc)₂ with the symmetric `end-off' compartmental proligand 2,6-[N,N^′-bis(2-hydroxy-phenylmethyl)-N,N^′-bis(2-pyridylmethyl)aminomethyl]-4-methylphenol (H₃L) in the presence of NaPF₆ has been found to generate a homotetranuclear nickel(II) complex [(Ni₄HL)(L)(OAc)₂(H₂O)₂(HOAc)₂]PF₆. The crystal structure of the complex reveals that the complex is donor asymmetric and that the extended supra-ligand periphery is maintained by a tight hydrogen-bond between two pendant phenol/phenoxy groups of adjacent ligands and by further tight hydrogen-bonds between coordinated acetic acid molecules and the remaining pendant phenols of the ligand, generating a double acid salt of the type [CH₃COO?H?LH?L?H?OOCCH₃]⁵⁻. Reaction of H₃L with Ni(OAc)₂ and NaClO₄ in methanol gave the complex [Ni₂(HL)(OAc)₂(OH₂)₂][ClO₄]. The structure was determined by X-ray diffraction and showed that the complex exists as a dimer promoted by intermolecular hydrogen-bonding.     

Enlarging the family of ferrocenylphosphine dinuclear rhodium complexes: synthesis and X-ray structure of a novel “A-frame”-type trimetallic Rh/Fe/Rh complex

The symmetrically substituted ligand 1,1^′-bis[di(5-methyl-2-furyl)phosphino]ferrocene (1) has been obtained from the bromophosphine BrP(Fu^Me)₂ and the dilithioferrocene/TMEDA adduct. The quantitative addition of this ferrocene derivative to the tetracarbonyl dimer [(CO)₄Rh₂{μ-(S^tBu)₂}] leads, through decarbonylation, to the dinuclear rhodium complex [(CO)₂Rh₂{μ-(S^tBu)₂}{μ-P,P-Fc[P(Fu^Me)₂]₂}] (2) in high yield. A X-ray structure [orthorhombic, space group P2₁2₁2₁; a=11.2982(2) Å, b=13.3165(3) Å, c=27.2687(7) Å] and the solution multinuclear NMR characterization are reported, which show that the rare “quasi-closed bridging” A-frame structure of the complex is rather similar to the one reported for [(CO)₂Rh₂{μ-(S^tBu)₂}{μ-P,P-dppf}] in solid state. However, in solution the furyl-containing ferrocenylphosphine complex presents a greater fluxionality, together with an electronic environment at phosphorus very different from the dppf analogue (δ_P=−10 and 27 ppm, respectively).     

Synthesis and structural characterization of Pd(II) complexes containing 2,6-bis[(dimethylamino)methyl]-4-methylphenolate ligand

Treatment of 2,6-bis[(dimethylamino)methyl]-4-methylphenol (1) with [Pd(PhCN)₂Cl₂] in a 1:1 molar ratio gives the mononuclear Pd(II) complex [PdCl₂(OC₆H₂(CH₂NMe₂)-2-Me-4-(CH₂NHMe₂)-6)] (2) containing one ligand with an ammonium hydrogen atom, which forms a bifurcated hydrogen bonding to the phenoxy oxygen and the chlorine atoms, as shown by the single crystal X-ray diffraction study. The reaction between the lithium salt of 1 and [Pd(COD)Cl₂] gives the mononuclear Pd(II) complex [Pd(OC₆H₂(CH₂NMe₂)₂-2,6-Me-4)₂] (3). The X-ray structure of 3 showed the presence of two ligands coordinated to one palladium metal center in a trans fashion with two dangling dimethylamine groups. The yield of the complex 3 was improved by carrying out the reaction between [Pd(OAc)₂] and 1 in acetone. The solid state structures of the complexes 2 and 3 were confirmed by ¹H, ¹³C, HETCOR NMR, IR and elemental analysis methods. The ¹H NMR spectra of 2 and 3 showed two different chemical shifts corresponding to the coordinated and uncoordinated amine groups of the ligand. No decoalescence of signals for the chelate ring puckering process was observed in variable-temperature NMR spectra.     

Fabacyl acetate, a germination stimulant for root parasitic plants from Pisum sativum

A germination stimulant, fabacyl acetate, was purified from root exudates of pea (Pisum sativum L.) and its structure was determined as ent-2′-epi-4a,8a-epoxyorobanchyl acetate [(3aR,4R,4aR,8bS,E)-4a,8a-epoxy-8,8-dimethyl-3-(((R)-4-methyl-5-oxo-2,5-dihydrofuran-2-yloxy)methylene)-2-oxo-3,3a,4,5,6,7,8,8b-decahydro-2H-indeno[1,2-b]furan-4-yl acetate], by 1D and 2D NMR spectroscopic, ESI- and EI-MS spectrometric, X-ray crystallographic analyses, and by comparing the ¹H NMR spectroscopic data and relative retention times (RR_t) in LC-MS and GC-MS with those of synthetic standards prepared from (+)-orobanchol and (+)-2′-epiorobanchol. The ¹H NMR spectroscopic data and RR_t of fabacyl acetate were identical with those of an isomer prepared from (+)-2′-epiorobanchol except for the opposite sign in CD spectra. This is the first natural ent-strigolactone containing an epoxide group. Fabacyl acetate was previously detected in root exudates of other Fabaceae plants including faba bean (Vicia faba L.) and alfalfa (Medicago sativa L.).     

Preparation of cobalt sandwich diphosphine ligand [(η-C5H4Pr)Co(η-C4(PPh2)2Ph2)] and its chelated palladium complex: Application of diphosphine ligand in the preparation of mono-substituted ferrocenylarenes

The reaction of (η⁵-C₅H₄ⁱPr)Co(PPh₃)₂ with PhCCPPh₂ furnished two isomeric cyclobutadiene-substituted Cp′CoCb diphosphines, [(η⁵-C₅H₄ⁱPr)Co(η⁴-1,2-(PPh₂)₂C₄Ph₂)] (5-cis) and [(η⁵-C₅H₄ⁱPr)Co(η⁴-1,3-(PPh₂)₂C₄Ph₂)] (5-trans). Further reaction of 5-cis with one molar equivalent of Pd(COD)Cl₂ gave palladium complex [(η⁵-C₅H₄ⁱPr)Co(η⁴-1,2-(PPh₂)₂C₄Ph₂)-PdCl₂] (6) in good yield. Both of the molecular structures of 5-cis and 6 were determined by single-crystal X-ray diffraction methods. Unexpectedly, the palladium complex 6 was found to be more efficient than the combination of the commonly used Buchwald’s ligand, biphenyl-2-yl-di-tert-butyl-phosphane, with Pd(OAc)₂ as the catalytic precursor in the Suzuki-Miyaura reaction between ferroceneboronic acid and 4-bromoaldehyde. The X-ray structural analysis and DFT study of several palladium complexes containing sandwich-type diphosphine chelating ligands revealed that the variations in bite angles are much larger than those in bite distances. The more energetically favorable conformation in the Pd(II) complexes is the one with bite angle close to 90°.     

Binuclear cyclopalladated pincer compounds bridged by ditopic nitrogenated ligands

The binuclear cyclopalladated compounds [(SCS)Pd-pz-Pd(SCS)][BF₄]₂ (pz = pyrazine) 2a, [(SCS)Pd-bipy-Pd(SCS)][BF₄]₂ (bipy = 4,4′-bipyridine) 2b, [(SCS)Pd-dcb-Pd(SCS)][BF₄]₂ (dcb = 1,4-dicyanobenzene) 2c and [(SCS)Pd-tmeda-Pd(SCS)][BF₄]₂ (tmeda = N,N,N′,N′-tetramethylethylenediamine) 2d (SCS = {C₆H₃-2,6-(CH₂SC₆H₄F-4)₂}) were synthesized by a substitution reaction between the pincer unit [Pd(C₆H₃-2,6-(CH₂SC₆H₄F-4)₂)Cl] 1 and the corresponding bidentate nitrogenated ligands. The topology of the bridging ligand between both pincer units induces the aggregation of the organometallic cations in the solid state. The X-ray diffraction molecular structures of complexes 2a and 2d are also reported.     

Synthesis of palladium(II) 3d-metal(II) paddlewheel acetate-bridged heterodimetallic complexes: Unexpected catalysis by water molecules

A study of the reaction kinetics between the trinuclear palladium(II) acetate Pd₃(μ-OOCMe)₆ (1) and the mononuclear 3d-metal (Ni^II, Co^II, Cu^II) acetates in acetic acid under water-specified conditions revealed a fairly complicated reaction mechanism triggered by the primary hydrolytic cleavage of an acetate bridge in molecule 1. The isolated reaction products, as established by X-ray diffraction study, are 1D polymeric complexes {Pd(μ-OOCMe)₄M(OH₂)(HOOCMe)₂}_n (M = Ni^II, Co^II, Cu^II, Mn^II, Zn^II) built of the Pd^II-based paddlewheel units [Pd(μ-OOCMe)₄M] and linked trough the H-bonded H₂O and MeCOOH molecules.     

On the complex formation of iron(III) bromide in the space-demanding solvent N,N′-dimethylpropyleneurea and the structure of the trisbromoiron(III) complex in solution and crystalline state

The complex formation between iron(III) and bromide has been studied calorimetrically in N,N′-dimethylpropyleneurea (DMPU), and the structure of the DMPU solvated tribromoiron(III) complex has been studied in solution by extended X-ray absorption fine structure (EXAFS) and large angle X-ray scattering (LAXS), and in solid state by EXAFS and single crystal X-ray diffraction. The calorimetric study showed that iron(III) forms three medium strong bromide complexes in DMPU, and the thermodynamic pattern strongly indicates that all complexes are formed in entropy driven substitution reactions. In DMPU solution, the tribromoiron(III) complex has a regular trigonal planar configuration with a mean Fe-Br bond distance of 2.36 Å, and without any solvent molecules strongly bound to iron(III). In the solid state, however, the structure is a slightly distorted trigonal bipyramid, with one short and two slightly longer Fe-Br bonds, 2.37 and 2.44 Å, respectively, in a somewhat distorted trigonal plane, and two DMPU solvent molecules (mean Fe-O bond distance 1.98 Å) in the apical positions. The DMPU solution of iron(III) bromide and the [FeBr₃(dmpu)₂] crystals are both blackish red.     

Structural isomerism involving an ambidentate ligand: the synthesis and characterization of diselenocyanato [bis(diphenylphosphino)methane] palladium(II) and cyano(selenocyanato) [diphenyl(diphenylphosphinomethyl)phosphine selenide] palladium(II)

The reaction, at 25 °C in methanol, between [Pd(SeCN)₄]²⁻ and bis(diphenylphosphino)methane (dpm) has been found to produce cyano(selenocyanato) [diphenyl(diphenylphosphinomethyl) phosphine selenide]palladium(II), [Pd(dpmSe)(CN)(SeCN)], wherein the cyanide group is trans to an Se atom which has been inserted into one PdP bond, and the selenocyanate group is trans to the unchanged diphenylphosphino group. The structure has been confirmed by the results of a single crystal X-ray diffraction study. The structural isomer, [Pd(dpm)- (SeCN)₂], of the foregoing complex has also been prepared by the reaction of Pd(C₂H₃O₂)₂ with dpm, followed by reaction with KSeCN. Heating the [Pd(dpm)(SeCN)₂] isomer converts it into [Pd- (dpmSe)(CN)(SeCN)]. A mechanism is proposed for the isomerization which involves an intramolecular selenium atom insertion.     

Crystal structure and DNA-binding studies of a new Cu(II) complex involving benzimidazole

A new Cu(II) complex of CuL(ClO₄)₂ (here, L = N,N,N′,N′-tetrakis[(2-benzimidazolyl)methyl]-1,3-diaminopropane) has been synthesized and characterized by elemental analyses, UV–Vis, FT-IR, cyclic voltammogram and X-ray single crystal diffraction. The Cu(II) environmental in complex is distorted octahedral. π–π stacking interactions stabilize the crystal packing together with the hydrogen-bonding interactions. The interaction of the complex with DNA has been investigated using equilibrium dialysis, UV spectra, fluorescent spectra, and gel electrophoresis. The results show that the Cu(II) complex can electrostatically bind to the phosphate group of DNA backbone, and partially intercalate into the double helix of DNA because of the bulky structure of the complex and the planarity of the benzimidazole rings.