From evergreen to deciduous tropical forests: how energy–water balance,temperature, and space influence the tree species composition in a high diversity region

Background: Understanding floristic and geographic patterns in one of the most biodiverse regions in the world – the Atlantic forest of eastern Bahia, Brazil – can identify the drivers of diversity in tropical forests and provide useful information for biological conservation.

Aims: To understand the role of both climate and geographical location on variation in tree species composition in a region characterised by an abrupt transition from wet forests to semi-arid thorn-woodlands. To test whether a regional classification of forests according to elevation belts and leaf flush pattern is consistent with floristic composition.

Methods: We submitted 14,094 tree species occurrence records and 31 geo-climatic variables prepared for 57 sites in eastern Bahia, Brazil, to multivariate and regression analyses and variance partitioning.

Results: Climate and space were both significantly (P ≤ 0.05) contributing to explaining floristic variations. Actual evapotranspiration, duration of water deficit, and minimum temperature of coldest month were the main predictors. Floristic differences were significant except when comparing evergreen lower plains and upper plains forests.

Conclusions: Although distance among sites may play an important role, species composition is chiefly influenced by environmental gradients. This highlights environmental heterogeneity as a key factor in the planning of biodiversity conservation in tropical forests.     

Invasive plant species thresholds in the forests of Robinson Crusoe Island,Chile

Background: Invasion by exotic plants worldwide can lead to the loss of native species, particularly on islands with a high proportion of endemic plants, such as Robinson Crusoe Island (RCI).

Aims: We studied the two most invasive exotic plant species occurring in the forest of RCI: Aristotelia chilensis and Rubus ulmifolius. We aimed at establishing thresholds for environmental and microsite variables related to invasion.

Methods: Environmental and forest understorey variables, including canopy gaps and invasive species cover were measured in non-invaded and invaded forest sites. We expected more invasion in plots located close to invasive shrublands, and in large gaps with high solar radiation.

Results: We found no relationship between the distance to invasive shrublands and invasion probability. Solar radiation tended to be slightly related with a higher cover of R. ulmifolius, the most abundant invasive exotic plant in RCI forests. Overall, the cover of native ferns appeared to inhibit invasion.

Conclusions: The identification of variable thresholds related to invasion can be useful for guiding management decisions. Our results suggest that management should consider monitoring forest canopy gap formation and promote the establishment of ferns to reduce the probability of invasive species establishing.     

Fruit production along roads and footpaths in an Atlantic rain forest area

Background: Pathways (footpaths and roads) in forests are associated with edge effects, affecting forest structure and composition and associated wildlife. However, little is known about how edge effects along pathways may impact the dynamics of fruit production and their availability for frugivores.

Aim: We related pathway width as a proxy for edge effects to fruit production. Our underlying hypothesis was that pathway width would be positively related to fruit production.

Methods: We observed fruit production along three pathways of different widths – 2, 10 and 20 m wide – and in a control area of undisturbed forest in an Atlantic rain forest stand monthly over a 2-year period.

Results: The number of species and individuals-bearing fruit was higher along the wider pathways than along the narrowest pathway and in the control area. The amount of zoochorous fruits was higher in the control area than along pathways, and the widest pathway had higher non-zoochorous fruits production. Fruiting peaks occurred along pathways, while fruiting in the control area was aseasonal.

Conclusions: Pathway width is related to fruit type and its quantity and temporal availability. These effects extend towards the forest interior beyond 35 m. The presence of paths affects food resources for frugivores and thus can contribute to reconfiguring the spatio-temporal distribution of the fauna.     

Habitat selection by adult Golden Eagles Aquila chrysaetos during the breeding season and implications for wind farm establishment

Capsule: Global Positioning System (GPS)-tagged adult Golden Eagles Aquila chrysaetos breeding in forests in northern Sweden selected clear-cuts, coniferous forests with lichens and steep slopes during the breeding season but avoided wetlands and mixed forest.

Aims: To investigate the habitat selection patterns of tree-nesting Golden Eagles, and identify how potential conflicts with wind farm development could be minimized.

Methods: The study is based on GPS tracking data from 22 adult eagles. We estimated home range sizes using a biased random bridge approach and habitat selection patterns using resource selection functions following a use-availability design.

Results: Core home range size among adults was variable during the breeding season (5–30?km²). Individual movement extents were variable, but sexes did not significantly differ in their scale of movement. At the landscape scale, individuals selected for clear-cuts and coniferous forest with ground lichens, whereas wetland, water bodies and mixed forest were avoided. Steeper and south facing slopes were selected for, whereas, north facing slopes were avoided.

Conclusions: Potential conflicts between eagles and wind energy establishment can be reduced if wind farms are placed away from steep slopes, minimizing areas that are clear-cut during construction, and locating turbines within dense, young and other less favoured forest habitats.     

Habitat use of the Wood Warbler Phylloscopus sibilatrix during spring migration versus breeding season based on citizen science data

Capsule: Citizen science data on Wood Warblers Phylloscopus sibilatrix showed that the species non-selectively used a wide variety of habitats during migration but had a tendency for settling to breed in forest and natural areas.

Aims: We tested the hypothesis that habitat used during spring stopovers in Spain differed from habitat use during the breeding period in Switzerland in a year of exceptional abundance as a result of persistent easterly winds in the Mediterranean.

Methods: Habitat use during spring migration 2015 was compared by using bootstrapping resampling techniques on citizen science data from Spain and Switzerland, comparing the land-cover categories between locations of observations with random pseudo-absences.

Results: Wood Warblers showed no preference for habitat features during migration and covered practically all available habitat types from urbanized areas to wetlands and forests, whereas in the breeding range birds showed an increasing tendency to be present in forest habitats.

Conclusions: Habitat use during spring migration covered most available habitat types from urbanized areas to wetlands and forests. Breeding habitat use was restricted to forested areas. Citizen science allowed a quick collection of biological data over a wide area to potentially identify large-scale biological patterns. This is essential to potentially manage international conservation efforts for declining species.     

Seasonal dynamics of avian guilds inside and outside core protected areas in an Andean Biosphere Reserve of southern Chile

Capsule: Many protected forests at high elevations show higher endemic biodiversity than unprotected habitats at low elevations. In seasonal ecosystems, however, harsh environmental conditions during winter may force individuals to move from protected forests to unprotected degraded forests in lowlands.

Aims: To examine how forest types and seasons affect avian diversity and habitat-use guilds in protected and unprotected forests.

Methods: Habitat and seasonal avian surveys were conducted to test forest type and seasonal differences on avian species richness, relative abundances and relative abundance of habitat-use guilds.

Results: Twenty-three avian species (～40% endemics) were recorded. Highland old growth forests showed the highest richness (4.1–4.9 species/point count). The lowest richness was recorded in mid-elevation secondary forests (3.1 species/point count). The highest relative abundances for habitat-specialist understorey users and large tree users were recorded in highland old growth forests. However, the abundance of large tree users was higher in secondary forests at low elevations during colder seasons.

Conclusions: Some species and guilds may move to lower elevations outside protected areas during winter. Increasing degradation of unprotected areas will likely affect the suitability of ‘winter habitat’ for specialist guilds, and thus the ecological processes and source/sink dynamics occurring across boundaries of protected and unprotected areas.     

Mutation in the beta3 subunit of Guanine nucleotide-binding protein (GNB3) gene is not associated with Type II diabetes mellitus risk: a case–control study of a North Indian population

Context: Genetics play a major role in development and pathophysiology of Type 2 diabetes mellitus (T2DM).

Objective: To asses the association of Guanine nucleotide-binding protein (GNB3) (C825T) gene's polymorphism with T2DM.

Materials and methods: A case–control study including 400 North Indians was performed using Polymerase Chain Reaction–Restriction Fragment Length Polymorphism (PCR-RFLP) approach to analyze genetic polymorphism.

Results: No significant difference was observed in genotype and allele frequencies of GNB3 gene on comparing cases with controls.

Discussion: Our study is in agreement with studies on Polish, Japanese, Hispanic-American and Danish populations who observed no significant association between GNB3 (C825T) polymorphism and T2DM.

Conclusion: GNB3 (C825T) polymorphism is not associated with T2DM.     

Edge effects on epiphytic lichen diversity in the forest-steppe of the Kazakh Altai

Background: Forests in forest-steppe ecotones are usually highly fragmented and much of the forested area is exposed to climate and land-use-related edge effects.

Aim: To test the hypothesis that the epiphytic lichen diversity at the forest edges was reduced compared with that in the forest interior, and to analyse lichen diversity in comparison with the more highly elevated and more continental Mongolian Altai.

Methods: Six plots each in the interior and the edge with a total of 240 Larix sibirica trees were studied in the Katon-Karagai National Park, East Kazakhstan.

Results: Species richness and evenness at the tree level were higher in the interior than at the edge. The epiphytic lichen diversity in the forest interior was similar in the Kazakh and Mongolian Altai, whereas that at the forest edge was lower in the Mongolian Altai.

Conclusions: Strong degradation of the forest edges in the Kazakh Altai is the probable cause of the reduced epiphytic lichen diversity compared with the interior. The similar species richness in the forest interiors of the Kazakh and Mongolian Altai suggests that the differences at the forest edge are probably, at least partly, due to different land-use regimes and not to differences in macroclimate.     

Sleep-disordered breathing is associated with higher carboxymethyllysine level in elderly women but not elderly men in the cardiovascular health study

Context: Carboxymethyl-lysine (CML) results from oxidative stress and has been linked to cardiovascular disease.

Objective: The objective of this study is to investigate the association between sleep-disordered breathing (SDB) – a source of oxidative stress – and CML.

Materials and methods: About 1002 participants in the Cardiovascular Health Study (CHS) were studied.

Results: Women with SDB had significantly higher CML concentration compared with those without SDB (OR?=?1.63, 95%CI?=?1.03–2.58, p?=?0.04). The association was not significant among men.

Discussion: SDB was associated with CML concentration among elderly women but not men in the Cardiovascular Health Study.

Conclusion: Accumulation of CML may be an adverse health consequence of SDB     

Pre-fledging survival in a Yellow-legged Gull Larus michahellis population in northern Iberia is mostly determined by hatching date

Capsule: Pre-fledging survival in a Yellow-legged Gull Larus michahellis population in northern Iberia is negatively correlated to hatching date.

Aims: To explore which factors have more importance in determining the pre-fledging daily survival rates in a Yellow-legged Gull population from northern Iberia. Specifically, we tested for the effect of hatching date and order, body size and condition and meteorological conditions on pre-fledging survival.

Methods: Cormack–Jolly–Seber models with mixtures were used to model daily survival rates.

Results: Daily survival rates were mostly negatively affected by hatching date.

Conclusions: Hatching date was the most important factor affecting survival of chicks during the pre-fledging period in a Yellow-legged Gull colony from northern Iberia.     

Resilience,vulnerability and conservation strategies in high-mountain pine forests in the Gredos Range,central Spain

Background: High-mountain pine forests and broom communities in central Spain today have led to contrasting interpretations of their natural or human-induced origin.

Aims: We evaluated the vulnerability and resilience of high-mountain Pinus sylvestris/P. nigra forests and derived Cytisus broom scrub communities to climate and anthropogenic disturbances.

Methods: We assessed historical transitions from forest to scrub and their relation to climate and human influences, using a multi-proxy paleoenvironmental study (pollen, non-pollen palynomorphs, charcoal, magnetic susceptibility) in three mires in the Gredos Range, western Iberian Central System.

Results: High percentages of Pinus sylvestris/nigra pollen and the identification of their macro remains demonstrated that high-mountain pine forests have been present in the oromediterranean bioclimatic belt of the Gredos Range since the mid-Holocene. After that, a major human-induced decline, enhanced by climate conditions, has led to their gradual replacement by broom communities.

Conclusions: Broom communities are derived from ancient pine forests that were intensively transformed by human activities after 700 cal year BP, and largely disappeared by ca. 500 cal yr BP. Today’s landscape, dominated by broom scrub and grasslands with scattered stands of pines, shows high resilience and provides suitable refugia for a rich mountain biodiversity which deserves a further protection.     

Differential expression of circulating vascular cell adhesion molecule-1 in subjects with coronary artery disease and cardiac syndrome X without known diabetes mellitus

Context: Inflammation is one of the mechanisms underlying cardiac syndrome X (CSX).

Objectives: Few studies have compared the expression of inflammatory or adhesion molecules between coronary artery disease (CAD) versus CSX.

Materials and methods: Ninety-two CSX and 145 CAD subjects without known diabetes mellitus underwent coronary angiogram for angina.

Results: Vascular cell adhesion molecule (VCAM)-1 (median, 507 versus 431?ng/ml, p?=?0.001) was significantly higher in the CAD group. In the binary regression, VCAM-1 was a significant differential factor for CAD versus CSX.

Discussion and conclusion: Adhesion molecules might be implicated in the differential expression of macro versus microvascular coronary disease.

Trial registration number: NCT01198730 at https://clinicaltrials.gov     

Release kinetics of high-sensitivity cardiac troponins I and T and troponin T upstream open reading frame peptide (TnTuORF) in clinically induced acute myocardial infarction

Context: Troponin T upstream open reading frame peptide (TnTuORF) may be useful as a novel biomarker in acute cardiac syndromes.

Objective: The study examined the early release kinetics of TnTuORF.

Materials and methods: We analyzed the time course of the release of cardiac troponins I and T and TnTuORF in patients (n?=?31) with hypertrophic obstructive cardiomyopathy undergoing transcoronary ablation of septal hypertrophy (TASH).

Results: Fifteen minutes after TASH, the levels of both troponins increased significantly (cTnT median: 18?ng/L versus 27?ng/L; cTnI median: 15?ng/L versus 25?ng/L). TnTuORF showed no variation.

Discussion: We observed a significantly greater increase in cTnI compared with cTnT.

Conclusion: Our results demonstrate that troponin assays allow early detection of myocardial injury, whereas TnTuORF levels remain unchanged in this setting.     

Plant functional group responses in an African tropical forest recovering from disturbance

Background: Newly protected, tropical forests recovering from logging and clearance are increasingly important targets for conservation. Recovery is typically evaluated or monitored by using a few easily identified species groups, but this may not be sufficient as unmonitored groups of equivalent ecological importance are unlikely to respond in a similar manner due to physiological or dispersal differences.

Aims: We compared four groups of plants: large trees, shrubs and saplings, herbs and ferns in a forest recovering from disturbance. We quantified the relative importance of disturbance history and local environmental conditions in determining species richness and community composition of these groups and assessed whether the groups could act as surrogate indicators for one another.

Methods: Vegetation was surveyed on a gradient of disturbance intensity and recovery time (20–60 years) in Mabira Forest, Uganda. We looked for correlations between species groups in richness or composition across sites and used constrained ordinations to identify important environmental variables.

Results: Neither species richness nor composition patterns were correlated between groups. All groups were weakly related to disturbance history; trees and shrubs were related to soil, herbs to microhabitat and ferns to microclimate.

Conclusions: No group acted as an indicator for another. The relative influence of disturbance and local environmental effects varied in the manner predicted, with disturbance stronger for trees and environment stronger for ferns.     

The role of recruitment and dispersal limitation in tree community assembly in Amazonian forests

Background: Species composition of plant communities is shaped by the interplay between dispersal limitation, environmental filters and stochastic events.

Aims: The aim of this work was to investigate the effects of dispersal limitation and environmental filtering on tree recruitment. To accomplish this, we employed the unified neutral theory of biodiversity and biogeography to examine migration within the metacommunity, defined as a set of interacting local communities linked by the dispersal of multiple potentially interacting species.

Methods: We sampled 12,975 individuals with dbh ≥ 1 cm in 26 1-ha permanent plots, including habitats of terra firme, transitional forests, várzea and campinarana, on the upper Madeira River, Brazilian Amazon.

Results: Campinarana drew individuals from outside the metacommunity species pool at a mean probability of recruitment of 0.06, a much lower probability than terra firme (0.31), transitional (0.21) and várzea forests (0.22). Environmental variables, such as water table depth, soil texture and fertility, were related to differences in community assembly.

Conclusions: Species abundance distribution and diversity patterns of plant assemblages in a large river landscape in the Amazon highlight the importance of environmental heterogeneity that conditions beta-diversity. The high variation in recruitment probabilities from the metacommunity species pool to local communities suggests high habitat variability in the process of maintaining patterns of local diversity.     

Circulating levels of apoptotic markers and oxidative stress parameters in women with polycystic ovary syndrome: a case-controlled descriptive study

Context: Apoptotic dysregulation plays a role in the pathogenesis of polycystic ovary syndrome (PCOS).

Objective: To evaluate circulatory apoptotic markers and oxidative stress in patients with PCOS.

Materials and methods: Forty-four women with PCOS, and 44 healthy women as controls were enrolled in the study. Oxidative stress parameters and caspases levels were measured in serum.

Results: The caspase 9 level was significantly lower and related with oxidant status in patients with PCOS, while the circulating levels of caspases 3 and 7 were statistically similar in both groups.

Discussion: This study is the first report demonstrating the circulating levels of apoptotic markers and their relationship with oxidant status in PCOS.

Conclusion: The circulating caspase 9 and oxidant status might contribute to apoptotic dysregulation in PCOS.     

Predictors of leptin concentration and association with cardiovascular risk in patients with coronary artery disease: results from the AtheroGene study

Context: Leptin is produced in white adipose tissue, but also in human coronary atherosclerotic lesions.

Objective: The aim of this study is to assess the prognostic value of leptin in patients with proven coronary artery disease (CAD) (N?=?1907).

Methods: AtheroGene is a contemporary CAD cohort study (N?=?3229). Median follow-up time was 3.8 (Quartile 1/3 with 2.8/4.9) years.

Results: Leptin concentration was associated with a hazard ratio (HR) for the fully adjusted model of HR?=?1.32 in women but was not significant in men. The endpoint cardiovascular death and non-fatal myocardial infarction was observed in 167 patients.

Conclusion: In women with known CAD, increased leptin concentration is useful for predicting cardiovascular death and non-fatal myocardial infarction.     

Riboflavin as an independent and accurate biomarker for adherence in a randomized double-blind and placebo-controlled clinical trial

Background: Medication adherence is critical for success of clinical trials.

Objective: To assess oral riboflavin is an adherence marker.

Methods: Riboflavin was incorporated into active treatment and placebo pills for a clinical trial lasting for 2 years.

Results: The accuracy (area under the receiver operating curve) of urinary riboflavin was 0.91 as a binary classifier of adherence, and was similar or better than for two active study ingredients daidzein (0.92) and genistein (0.87) (all p?<?0.0001). Decreased adherence over time was similar in the two study groups.

Conclusion: Riboflavin is an accurate and useful biomarker for study pill ingestion.     

Bacterial pili,with emphasis on Mycobacterium tuberculosis curli pili: potential biomarkers for point-of care tests and therapeutics

Context: Novel biomarkers are essential for developing rapid diagnostics and therapeutic interventions

Objective: This review aimed to highlight biomarker characterisation and assessment of unique bacterial pili.

Methods: A PubMed search for bacterial pili, diagnostics, vaccine and therapeutics was performed, with emphasis on the well characterised pili.

Results: In total, 46 papers were identified and reviewed.

Conclusion: Extensive analyses of pili enabled by advanced nanotechnology and whole genome sequencing provide evidence that they are strong biomarker candidates. Mycobacterium tuberculosis curli pili are emphasised as important epitopes for the development of much needed point-of-care diagnostics and therapeutics.     

Association between polymorphisms in IL21 gene and risk for sepsis

Context: Sepsis is now the leading cause of death in the noncardiovascular intensive care unit (ICU).

Objective: To investigate whether polymorphisms in IL21 gene contribute to sepsis susceptibility.

Materials and methods: Three single-nucleotide polymorphisms of IL21 (rs907715, rs2055979, rs12508721) were genotyped by TaqMan assay in patients with sepsis and control subjects.

Results: Polymorphisms rs2055979 and rs12508721 in IL21 were more frequent in sepsis patients compared to general population. But allele frequency of rs907715 was not significantly different between sepsis patients and control subjects.

Conclusion: Polymorphisms in IL21 may be associated with sepsis risk.