Some evolutionary trends in caligid copepods

The genera Caligus and Lepeophtheirus can be used to illustrate some evolutionary trends. The most striking example of these trends is a gradual reduction of the fourth thoracopod, now largely functionless. All stages of this reduction can be found in Caligidae. Other, apparently correlated, changes are also present. For example, reduction in the armature of the first thoracopod occurs mainly among species in which the fourth exopod has become two-segmented, though still retaining the seta associated with the original three-segmented structure.     

Social recognition in wild fish populations

The ability of animals to gather information about their social and physical environment is essential for their ecological function. Odour cues are an important component of this information gathering across taxa. Recent laboratory studies have revealed the importance of flexible chemical cues in facilitating social recognition of fishes. These cues are known to be mediated by recent habitat experience and fishes are attracted to individuals that smell like themselves. However, to be relevant to wild populations, where animals may move and forage freely, these cues would have to be temporally flexible and allow spatial resolution. Here, we present data from a study of social recognition in wild populations of three-spined sticklebacks (Gasterosteus aculeatus). Focal fish preferentially associated with conspecifics from the same habitat as themselves. These preferences were changed and updated following translocation of the focal fish to a different site. Further investigation revealed that association preferences changed after 3 h of exposure to different habitat cues. In addition to temporal flexibility, the cues also allowed a high degree of spatial resolution: fish taken from sites 200 m apart produced cues that were sufficiently different to enable the focal fish to discriminate and associate with fish captured near their own home site. The adaptive benefits of this social recognition mechanism remain unclear, though they may allow fish to orient within their social environment and gain current local information.     

Pedigree reconstruction in wild cichlid fish populations

It is common practice to use microsatellites to detect parents and their offspring in wild and captive populations, in order to reconstruct a pedigree. However, correct inference is often constrained by a number of factors, including the absence of demographic data and ignorance regarding the completeness of parental sampling. Here we present a new Bayesian estimator that simultaneously estimates the pedigree and the size of the unsampled population. The method is robust to genotyping error, and can estimate pedigrees in the absence of demographic data. Using a large-scale microsatellite assay in four wild cichlid fish populations of Lake Tanganyika (1000 individuals in total), we assess the performance of the Bayesian estimator against the most popular assignment program, Cervus. We found small but significant pedigrees in each of the tested populations using the Bayesian procedure, but Cervus had very high type I error rates when the size of the unsampled population was assumed to be lower than what it was. The need of pedigree relationships to infer adaptive processes in natural populations places strong constraints on sampling design and identification of multigenerational pedigrees in natural populations.     

Evidence of melanoma in wild marine fish populations

The increase in reports of novel diseases in a wide range of ecosystems, both terrestrial and marine, has been linked to many factors including exposure to novel pathogens and changes in the global climate. Prevalence of skin cancer in particular has been found to be increasing in humans, but has not been reported in wild fish before. Here we report extensive melanosis and melanoma (skin cancer) in wild populations of an iconic, commercially-important marine fish, the coral trout Plectropomus leopardus. The syndrome reported here has strong similarities to previous studies associated with UV induced melanomas in the well-established laboratory fish model Xiphophorus. Relatively high prevalence rates of this syndrome (15%) were recorded at two offshore sites in the Great Barrier Reef Marine Park (GBRMP). In the absence of microbial pathogens and given the strong similarities to the UV-induced melanomas, we conclude that the likely cause was environmental exposure to UV radiation. Further studies are needed to establish the large scale distribution of the syndrome and confirm that the lesions reported here are the same as the melanoma in Xiphophorus, by assessing mutation of the EGFR gene, Xmrk. Furthermore, research on the potential links of this syndrome to increases in UV radiation from stratospheric ozone depletion needs to be completed.     

Reproductive ecology of cultured fish in the wild

Domestication has been shown to have an effect on morphology and behaviour of Atlantic salmon ( Salmo salar ). We compared swimming costs of three groups of juvenile Atlantic salmon subject to different levels of domestication: (1) wild fish; (2) first generation farmed fish origination from wild genitors; and (2) seventh generation farmed fish originating from Norwegian aquaculture stocks. We assessed swimming costs under two types of turbulent flow (one mean flow velocity of 23 cm s⁻¹ and two standard deviations of flow velocity of 5 and 8 cm s⁻¹). Respirometry experiments were conducted with fish in a mass range of 5–15 g wet at a water temperature of 15° C. Our results confirm (1) that net swimming costs are affected by different levels of turbulence such that, for a given mean flow velocity, fish spent 1·5‐times more energy as turbulence increased, (2) that domesticated fish differed in their morphology (having deeper bodies and smaller fins) and in their net swimming costs (being up to 30·3% higher than for wild fish) and (3) that swimming cost models developed for farmed fish may be also be applied to wild fish in turbulent environments.     

Disease interaction between farmed and wild fish populations

This paper reviews the literature on disease interaction between wild and farmed fish and recommends strategies to reduce the disease risks to both populations. Most, if not all, diseases of farmed fish originate in wild populations. The close contact between farmed and wild fish readily leads to pathogens exchange. Aquaculture creates conditions ( e.g. high stocking levels) conducive to pathogen transmission and disease; hence pathogens can overspill back, resulting in high levels of challenge to wild populations. This is exemplified by sea lice infections in farmed Atlantic salmon. Stocking with hatchery reared fish or aquaculture escapees can affect disease dynamics in wild populations. Whirling disease has been spread to many wild rainbow trout populations in the US with the release of hatchery reared stock. The greatest impact of aquaculture on disease in wild populations has resulted from the movement of fish for cultivation. Examples of exotic disease introduction following movement of live fish for aquaculture with serious consequences for wild populations are reviewed. The salmon parasite, Gyrodactylus salaris, has destroyed wild salmon populations in 44 Norwegian rivers. Crayfish plague has wiped out European crayfish over much of Europe. Eels numbers have declined in Europe and infection with the swimbladder nematode Anguillicola crassus has in part been blamed. The impact of disease in farmed fish on wild populations can mitigated. Risk analysis methods need to be refined and applied to live fish movement and new aquacultural developments. Appropriate biosecurity strategies, based on risk assessments, should be developed to reduce pathogen exchange and mitigate the consequences.     

Reproductive and dietary parameters in wild greater galago populations

Information concerning habitat, body size, reproductive status, and diet was recorded from 348 greater galagos, captured at six different localities in Tanzania and southern Africa between 1953 and 1955. The localities extended from Pemba Island in the north to Chikwawa, Malawi, in the south and varied broadly in the same order in degree of climatic aridity— from well-watered clove and coconut plantations to seasonally very dry woodland. Animals from the three northern localities fell within the geographic range of Galago garnettii,while the rest were assumed to be G. crassicaudatus.Statistical analysis of body size parameters confirmed this allocation. Data on fetal occurrence, vaginal and labial condition, and lactation indicate a restricted breeding season for both species, with peak proportions in estrus in August in G. garnettiiand in May-July in G. crassicaudatus.Gut content data indicate a variety of foods, with a preponderance in the northern localities of soft fruit such as mango, pawpaw, and coconut pulp; gum was a major carbohydrate source in the southernmost localities. Contrary to expectations, tooth damage, in the form of both loss and breakage, was much more prevalent in G. garnettiithan in G. crassicaudatus.The teeth most commonly lost were the upper incisors— perhaps because of the high acid and sugar content of a frugivorous diet. The high incidence of breakage of the lower incisors and upper canines indicates the inclusion of hard-shelled food sources in the diet of G. garnettii.     

Reproductive and demographic parameters in two Iberian wild boarSus scrofa populations

From 1990 to 2006, we studied the demographic, reproductive, and biometric characteristics of two Iberian wild boarSus scrofa (Linnaeus, 1758) populations in contrasting environments. In the Pyrenees (studied in 1990–1993), forest cover is high, hunting pressure is low, and the density of wild boar is high. In the Ebro Valley (studied in 1994–2006), there are few shelter areas for boars, hunting pressure is high, and density is very low. In the second semester of life and after two years of age, the sows in Ebro Valley were heavier than were those in the Pyrenees. Pregnancy during the first year of life was frequent in the Ebro Valley and rare in the Pyrenees. Litter sizes, ovulation rates, and intrauterine mortalities did not differ significantly between the two populations, but the foetal sex ratio in the Ebro Valley was skewed significantly towards males. Life expectancy was lower in the Ebro Valley (6 yr) than it was in the Pyrenees (10 yr). In the Ebro Valley 75% of the wild boar were >24 months old, whereas in the Pyrenees, the proportion was 59%. We suggest that shelter availability influenced the growth, productivity, hunting pressure, and life expectancy in the two Iberian populations of wild boar.     

Modeling possible cooling-water intake system impacts on Ohio River fish populations

To assess the possible impacts caused by cooling-water intake system entrainment and impingement losses, populations of six target fish species near power plants on the Ohio River were modeled. A Leslie matrix model was constructed to allow an evaluation of bluegill, freshwater drum, emerald shiner, gizzard shad, sauger, and white bass populations within five river pools. Site-specific information on fish abundance and length-frequency distribution was obtained from long-term Ohio River Ecological Research Program and Ohio River Sanitation Commission (ORSANCO) electrofishing monitoring programs. Entrainment and impingement data were obtained from 316(b) demonstrations previously completed at eight Ohio River power plants. The model was first run under a scenario representative of current conditions, which included fish losses due to entrainment and impingement. The model was then rerun with these losses added back into the populations, representative of what would happen if all entrainment and impingement losses were eliminated. The model was run to represent a 50-year time period, which is a typical life span for an Ohio River coal-fired power plant. Percent changes between populations modeled with and without entrainment and impingement losses in each pool were compared to the mean interannual coefficient of variation (CV), a measure of normal fish population variability. In 6 of the 22 scenarios of fish species and river pools that were evaluated (6 species x 5 river pools, minus 8 species/river pool combinations that could not be evaluated due to insufficient fish data), the projected fish population change was greater than the expected variability of the existing fish population, indicating a possible adverse environmental impact. Given the number of other variables affecting fish populations and the conservative modeling approach, which assumed 100% mortality for all entrained fish and eggs, it was concluded that the likelihood of impact was by no means assured, even in these six cases. It was concluded that in most cases, current entrainment and impingement losses at six Ohio River power plants have little or no effect at the population level.     

Predicting the impacts of climate change on the evolutionary adaptations of polar fish

The recognition of the important role of the polar habitats in global climate changes has awakened great interest in the evolutionary biology of the organisms that live there, as well as the increasing threat of loss of biological diversity and depletion of marine fisheries. These organisms are exposed to strong environmental constraints, and it is important to understand how they have adapted to cope with these challenges and to what extent adaptations may be upset by current climate changes. Adaptations of the dominant group of Antarctic fish, the suborder Notothenioidei, have been thoroughly investigated by several teams. Considering the amount of information available on cold adaptation, the study of fish adapted to the extreme conditions of the polar seas will allow us to gain invaluable clues on the development, impact and consequences of climate and anthropogenic challenges, with powerful implications for the future of the Earth.     

The use of tumors in wild populations of fish to assess ecosystem health

Evidence has linked toxicants in aquatic systems with cancer in fish and population level effects on species. Thus some types of tumors may be useful monitors of ecosystem health, at least as affected by genotoxins and promoters. However, tumors caused by purely genetic mechanisms or by virus would not be good indicators. Only neoplasms which have chemicals as a portion of their etiology (either as initiators or promoters) would be useful in assessing ecosystem health. Lesions which may fit these criteria include liver neoplasms (both biliary and hepatic) and skin lesions in a variety of primarily benthic fishes, and neural lesions in various drum species and in butterfly fish species. Two studies purporting to demonstrate a lack of tumors in fish from polluted areas have been reexamined and found either to have insufficient data on vulnerable species or to actually support a tumor-pollution linkage. Thus certain lesions in vulnerable species or species groups may serve as a mechanism to assess one facet of ecosystem health.     

Domestication, comparative biology and interactions of wild and cultured fish: convenor's synthesis

Aquaculture is expanding rapidly and many fish species are brought into cultivation, entering a process of domestication with consequences for their morphology, physiology, ecology and evolution. In some species the abundance of cultured populations matches or exceeds that of wild stocks, and interactions between cultured and wild fish can pose significant conservation challenges. At the same time, captive breeding and re‐introduction play an important role in the conservation of some of the world's most endangered fishes. Drawing on contributions from the FSBI Symposium and the wider literature, we synthesize current knowledge of the process and extend of fish domestication, interactions between cultured and wild fish, and the use of cultured fish in fisheries enhancement and restoration. We provide a perspective on the role of biological issues within the wider context of aquaculture development and aquatic conservation biology, and conclude with a discussion of promising avenues for further research.     

A review of methods for estimating mortality due to parasites in wild fish populations

Six methods are described for detecting mortality due to parasitic infections in natural fish populations. They are: (a) through autopsies; (b) by determining the frequency of infections known to be eventually lethal; (c) by observing a decrease in the prevalence of a long-lived parasite (or permanent scar from a parasite) with host age; (d) by observing a decrease in the variance/mean ratio for the parasites with host age; (e) by comparing the observed frequency of a combination of two independent events with the calculated probability of their occurrence; and finally (f) by comparing the observed frequency distribution of the parasite, with a projected frequency based on data from lightly infected fish. In this technique, negative binomials are fitted to the data and truncated at various points. Some advantages and disadvantages of the different methods are given, together with examples. The methods do not necessarily provide definitive answers, but they are indicative of whether or not significant parasite-related mortality may be occurring, and in some cases provide an estimate of its probable magnitude in terms of the total host mortality rate.     

Diagnostic methodology is critical for accurately determining the prevalence of Ichthyophonus infections in wild fish populations

Several different techniques have been employed to detect and identify Ichthyophonus spp. in infected fish hosts; these include macroscopic observation, microscopic examination of tissue squashes, histological evaluation, in vitro culture, and molecular techniques. Examination of the peer-reviewed literature revealed that when more than 1 diagnostic method is used, they often result in significantly different results; for example, when in vitro culture was used to identify infected trout in an experimentally exposed population, 98.7% of infected trout were detected, but when standard histology was used to confirm known infected tissues from wild salmon, it detected ~50% of low-intensity infections and ~85% of high-intensity infections. Other studies on different species reported similar differences. When we examined a possible mechanism to explain the disparity between different diagnostic techniques, we observed non-random distribution of the parasite in 3-dimensionally visualized tissue sections from infected hosts, thus providing a possible explanation for the different sensitivities of commonly used diagnostic techniques. Based on experimental evidence and a review of the peer-reviewed literature, we have concluded that in vitro culture is currently the most accurate diagnostic technique for determining infection prevalence of Ichthyophonus , particularly when the exposure history of the population is not known.     

Dispersal of Udonella australis (Monogenea: Udonellidae) between caligid copepods Caligus rogercresseyi and Lepeophtheirus mugiloidis on Chilean rock cod

Udonella australis is a platyhelminth that lives on the surface of the ectoparasite copepods Caligus rogercresseyi and Lepeophtheirus mugiloidis, which coexist on the Chilean rock cod Eleginops maclovinus. The absence of a planktonic oncomiracidium stage in the life cycle of udonellids may limit their dispersal ability. However, the high prevalence and intensity of U. australis on C. rogercresseyi suggest they have developed dispersal strategies to compensate for the lack of a free-living larval stage. The goals of this study were to determine the main dispersal mechanisms of U. australis in 1 copepod species and to compare the dispersal ability of U. australis between 2 different copepod species. Chilean rock cods were infected with female (without udonellids) and male (with and without udonellids) C. rogercresseyi. Other fishes were also infected with this copepod (with U. australis) and with L. mugiloidis (without U. australis). The dispersal of udonellids among copepods occurs through both intraspecific and interspecific processes. The main dispersal mechanism appears to be copepod mating; contact between same-sex individuals is less important. Intraspecific dispersal seems to be more dependent on the number of udonellids per fish than on copepod abundance, as observed for interspecific dispersal.     

A review of the use of copepods in marine fish larviculture

In spite of the growing interest and success obtained using cultured-copepods, their use in marine aquaculture remains sporadic. Besides, mass culture of several marine copepods has been well established by several authors. However, the upscale of copepod cultures to commercial levels is still a challenge. The practice of using wild copepods from natural ponds which thus increases the risk of parasitic infections of most species has limited their application in aquaculture. The present paper thus emphasizes on recent research efforts focused on the use of chemical treatments and freeze-thawing methods to eradicate procercoids from copepods. Research efforts focused on copepod culture systems which subsequently improved and refined their culture in marine fish larviculture are also well discussed. Advances in the use of copepod eggs as potential source of nauplii for marine fish larvae with special emphasis on the viability, storage conditions and biochemical compositions of the copepod eggs are underscored. Additionally, recent advances in the biochemical compositions (protein, amino acids, pigments, and vitamins) of copepods, which has received relatively little attention compared to researches on the lipid and fatty acid compositions are well emphasized. Specific recommended areas for further research are also proffered.