A test of normalization methods for marine sediment,including a new post-extraction normalization (PEN) technique

Chemical analyses of sediment are used for assessing the ability of sediment to support a healthy benthos (sediment quality) and for determining contaminant source and dispersion in aquatic systems. Total sediment analysis is used for sediment quality assessment, whereas source identification and dispersion requires normalised contaminant data. Normalized contaminant data are obtained by physical fractionation (size-normalization) of the sediment and analyses of a constant size fraction (usually the 62.5 m fraction), whereas elemental normalization uses the total sediment analysis normalized to a conservative element. Elemental normalization is preferable, as it is cheaper and less time consuming than size-normalization techniques. In addition, some contaminants associated with oxides and oxyhydroxides in the coarse fraction are excluded in fine fraction analyses. Five techniques used to normalize sedimentary contaminant data were tested in the current study, including a new post-extraction normalization method where total sediment data are normalized to the residue after digestion, on the assumption that this fraction acts as a diluent only. Results of the tests indicated that simple normalization to the mud fraction provides useful dispersion information, but that the post-extraction normalization method produced a superior indication of source. Limited source and dispersion information was gleamed from the elemental-normalization (Al, Fe) approach, whereas the size-normalization technique provided the clearest indication of source and dispersion. Simple mud normalization and post-extraction normaliaation methods should be considered because only one analysis provides sediment quality, as well as source and dispersion information. However, for detailed information on source and dispersion, size normalization is recommended.     

Nutrient transfer between parafluvial interstitial water and river water: influence of gravel bar heterogeneity

1. Nutrient concentrations in interstitial water springs at the downstream ends of two gravel bars in the River Rhône were measured in order to estimate the importance of nutrient inputs [nitrate, dissolved organic carbon (DOC), biodegradable and refractory fractions of DOC] from the parafluvial zone (saturated sediments adjacent to the wetted channel, i.e. interstitial habitats of gravel bars) to the river as well as seasonal variations in these inputs.
2. Compared with surface water, parafluvial water had lower concentrations of DOC (especially the refractory fraction) and generally higher concentrations of nitrate. These differences were at their lowest during winter.
3. The influence of gravel bar geomorphological heterogeneity (grain size and spatial distribution of fine sediments) on parafluvial inputs was studied in terms of nutrient content and biofilm characteristics along transects across the gravel bars.
4. A gravel bar located in a stable area of the river had low transversal heterogeneity and acted as a sink for DOC and as a source of nitrate. The low fine sediment content and the high oxygenation of interstitial water must have enabled aerobic processes such as mineralization of organic matter and nitrification to occur.
5. In contrast, gravel bars located in a degradation zone of the river had a spatially variable structure, acting as a sink for DOC and nitrate because localized accumulation of fine sediment and ensuing hypoxic conditions induced anaerobic processes such as denitrification.
6. This study highlights the important influence of geomorphological heterogeneity in gravel bars for nutrient transformations as well as nutrient exchanges between parafluvial interstitial systems and the adjacent river over a seasonal cycle.     

Appraisal of contaminants in sediments of the Inner Bristol Channel and Severn Estuary

In the inner Bristol Channel and Severn Estuary, most contaminated stations were in muddy, depositional areas of the estuary, particularly along the Welsh coast between the Rivers Taff and Usk, and also on the English coast between Avonmouth and Severn Beach. Some deeper areas, dominated by sand and mixed sediments, also showed contaminant concentrations in excess of those predicted from sediment texture, organic matter, and aluminium or iron concentrations.
Concentrations of lead, copper, chromium, nickel and zinc have decreased in the muddy sediments since the 1970s, but only lead has decreased in sand. With the exception of zinc, which is high in the Severn, trace element concentrations were comparable to those from other British estuaries.
Landward of the proposed barrage, contaminants are associated with the sub-estuaries and muddy areas at their confluence with the main estuary. Post-barrage effects on contaminants will be focused in these muddy areas. However, fine sediment deposition on what are now sandy areas would increase their contaminant burden unless calcium build-up from the resulting molluscan fauna has the antagonistic effect of contaminant dilution in the sediment.     

Effects of a sewage treatment plant outlet pipe extension on the distribution of contaminants in the sediments of the Bay of Vidy, Lake Geneva, Switzerland

In 2001, the municipality of Lausanne extended the outlet pipe of the sewage treatment plant into the Bay of Vidy (Lake Geneva, Switzerland) as a measure to reduce bacterial water pollution and sediment contamination close to the lake beaches. The aim of the present study was to assess the impact of this measure. Lake bottom sediments were collected and analyzed for grain size, organic matter, organic carbon, nitrogen, phosphorus, heavy metals and hydrophobic organic compounds to evaluate their concentration and spatial distribution. Our results demonstrate that, compared to results obtained before the outlet pipe prolongation, the surface area of highly contaminated sediments was reduced by one third after the pipe extension. However, contaminant concentrations are still high and the accumulation of pollutants may represent a significant source of toxicity for benthic organisms. One concludes that contaminant reduction at the source will be necessary for a further improvement.     

街尘与城市降雨径流污染的关系综述

街尘是引起城市面源污染分布最为广泛、最重要的污染物载体,街尘及其负载的污染物与降雨冲刷相关过程的全面认识,对有效控制城市地表径流污染有着重要的意义.针对全球快速城市化背景下街尘及其降雨冲刷污染的研究现状,阐明了街尘及其降雨冲刷污染的不足与难点,并对未来研究方向的突破性给予展望.     

Seagrass–Sediment Feedback: An Exploration Using a Non-recursive Structural Equation Model

The reciprocal effects between sediment texture and seagrass density are assumed to play an important role in the dynamics and stability of intertidal?Ccoastal ecosystems. However, this feedback relationship has been difficult to study empirically on an ecosystem scale, so that knowledge is mainly based on theoretical models and small-scale (experimental) studies. In this paper we apply a non-recursive structural equation model (SEM) to empirically investigate, at large spatial scale, the mutual dependence between seagrass (Zostera noltii) density and sediment texture, on the pristine, seagrass-dominated, intertidal mudflats of the Banc d??Arguin, Mauritania. The non-recursive SEM allows consistent estimation and testing of a direct feedback between sediment and seagrass whilst statistically controlling for the effects of nutrients and abiotic stress. The resulting model is consistent with the hypothesized negative feedback: grain size decreases with seagrass density, whereas fine grain size has a negative impact on seagrass density because it decreases pore water exchange which leads to hypoxic sediment conditions. Another finding is that seagrass density increases with sediment organic material content up to a threshold level beyond which it levels off. In combination with decreasing grain size, accumulation of organic matter creates hypoxic sediment conditions which lead to the production of toxic hydrogen sulfide which slows down seagrass growth. The negative feedback loop implies that intertidal Z. noltii modifies its own environment, thus controlling its growing conditions. To the best of our knowledge, this study is the first to demonstrate a direct negative feedback relationship in ecosystems by means of a non-recursive SEM.     

Linking nutrient limitation and water chemistry in upland lakes to catchment characteristics

Overbank sedimentation on river floodplains can result in significant reduction of the suspended sediment load transported by a river and can thus represent an important component of the catchment sediment budget. Such conveyance losses will also exert an important influence on sediment-associated contaminant fluxes and budgets. This contribution reports the results of a study of sediment-associated contaminants (i.e. total-P, Cr, Cu, Pb and Zn) fluxes in the River Swale (1346 km²) and River Aire (1002 km²) in Yorkshire, U.K., aimed at quantifying the role of overbank floodplain sedimentation in the sediment-associated contaminant budgets. The catchment of the River Aire is dominated by urban and industrial land use in its middle and lower reaches, whereas the River Swale drains a largely rural catchment, although there is a legacy of metal mining in its headwaters which impacts on heavy metal transport by the river. The results for the River Swale indicate that the conveyance losses associated with the deposition of sediment-associated contaminants on the floodplains bordering the main river can be as high as 47% of the total flux through the main channel system. Equivalent values for the River Aire range up to 26%. Contrasts between the two rivers reflect both the location of the contaminant sources within the catchments and the relative magnitude of the fine sediment deposition fluxes associated with their floodplains.     

Land reclamation as a cause of fine-grained sediment depletion in backbarrier tidal flats (Southern North Sea)

Grain size distribution patterns along the East Frisian coast (German Wadden Sea) were evafuated with the aim of identifying potential effects of man-made structures (e.g. dikes) on the textural composition and sediment budget of the area. It was found that the distribution of various grain size fractions and settling velocities revealed a well-defined cross-shore energy gradient. Adjacent to the mainland dike the sediment is dominated by the 3.0–3.5 phi sand fraction (>70% by weight). In comparison to the sedimentary sequences normally observed in unobstructed backbarrier depositional environments, the sediments along the land-ward margin are in this case conspicuously depleted in grain sizes <3.5 phi, the corresponding size fractions contributing <20% by weight. This suggests that the dike interrupts the normal energy gradient, thereby inhibiting the deposition of sediments with settling velocities <0.5 cm s⁻¹. This interpretation is confirmed when comparing individual cross-shore transects. The shorter the transect between the barrier island shore and the dike, the greater the fine sediment depletion. Since many faunal assemblages are grain-size specific, it is further suggested that the backbarrier ecosystem must have undergone significant modifications as a result of the substantial reduction in mud flats since the onset of dike construction some 1000 years BP. It is predicted that in the wake of the persisting and possibly accelerating sealevel rise this process of fine sediment depletion will continue and also affect progressively coarser sediments.     

A reconnaissance survey of the source of interstitial fine sediment recovered from salmonid spawning gravels in England and Wales

The declining salmonid populations reported for many rivers in England and Wales have frequently been attributed to spawning gravel siltation and the need to address this problem through sediment control strategies has been widely recognised. The planning of such sediment control strategies is, however, severely hampered by the lack of reliable information on the source of the fine sediment deposited within spawning gravels. Given the need for information on the source of the fine sediment accumulating in salmonid spawning gravels, a reconnaissance survey, based on the source fingerprinting approach, has been undertaken to establish the source of fine interstitial sediment recovered from spawning gravels in 18 important salmonid rivers in England and Wales. The findings confirm the potential of the fingerprinting approach for establishing the provenance of interstitial fines. More specifically, the results provide useful information on the relative importance of surface and channel/subsurface sources as the source of the interstitial fines collected from the individual study rivers. Significant regional contrasts in the source of this sediment are reported. The findings have important implications for the design and implementation of effective sediment management strategies aimed at protecting salmonid spawning gravels, in terms of both the sources to be targeted and the associated need to adopt different approaches in different rivers.     

Consistent production of cost-effective longSAGE libraries

Serial analysis of gene expression (SAGE) and related techniques are gaining popularity as tools for exploring expression of plant genes but remain suboptimal because of smaller-than-expected average concatemer sizes. The presence of low-molecular-weight contaminants in high-molecular-weight concatemer fractions reduces the average size of cloned fragments, thereby limiting the viability of high-throughput sequencing methods. Implementation of an additional digestion step to promote formation of linear concatemer fragments appears to reduce the proportion of contaminants indirectly, but with variable results. We explored the effect of initial ditag polymerase chain reaction (PCR) quantity on the average size of cloned concatemers from the greater than 1000-bp fraction. The quantity of PCR material used was found to have a strong influence on the frequency of low-molecular-weight contaminants within this fraction, which has important implications for reducing costs associated with high-throughput sequencing of concatemer clones.     

Development of a Distributed Watershed Contaminant Transport,Transformation, and Fate (CTT&F) Sub-model

CTT&F is a physically based, spatially distributed watershed contaminant transport, transformation, and fate sub-model designed for use within existing hydrological modeling systems. To describe the fate of contaminants through landscape media as well as spatial variations of contaminant distributions, physical transport and transformation processes in CTT&F are simulated for each cell in the model and routed to the watershed outlet. CTT&F simulates contaminant erosion from soil and transport across the land surface by overland flow. The model also simulates contaminant erosion from stream bed sediment and transport through channels in addition to transport of contaminants inputs by overland flow. CTT&F can simulate solid (granular) contaminant transport and transformation, including partitioning between freely dissolved, dissolved organic carbon (DOC) bound, and particle-sorbed phases. To demonstrate model capabilities, CTT&F was coupled with an existing distributed hydrologic model and was tested and validated to simulate RDX and TNT transport using two experimental plots. These experiments examined dissolution of solid contaminants into the dissolved phase and their subsequent transport to the plot outlet. Model results were in close agreement with measured data. Such a model provides information for decision makers to make rational decisions relevant to the fate of toxic compounds.     

Influence of currents and waves on the whirling up of benthic diatoms living on intertidal flats

Summary Experimental observations showed that the presence of relatively dense populations of benthic diatoms in the water can be caused by water currents of relatively low velocity. However, field observations showed that wave action can strongly increase the whirling up of these populations. Observations done in the laboratory and in the field showed that benthic diatoms reached the water column together with resuspended sediment. The field observations indicated that, in contrast with the fine sediment fraction, bare parts of sand grain particles are relatively insignificant as a substrate for benthic diatoms. It is suggested that in turbid areas with extensive flats the benthic diatom populations are an important additional food source for the pelagic fauna.Publication no. 47 of Biological Research Ems-Dollard Estuary.     

Effects of fine sediment accumulation on the redd environment and the survival rate of masu salmon (Oncorhynchus masou) embryos

In recent years, fine sediment, produced by run-off associated with forestry activity and agricultural development that accumulates on riverbeds, has exerted a deleterious influence on lotic ecosystems. This study examined the Oroennukibetsu River, a tributary of the Nukibetsu River, which has been affected by high loads of suspended sediments. Effects of accumulation of fine sediment on the survival rate of masu salmon embryo and also on the redd environment (permeability and intragravel dissolved oxygen concentration) were quantified through a field experiment. Results show that the interchange of DO between intragravel and surface water was not affected directly by permeability or the accumulated fine sediment and that intragravel flow rates can be an important factor controlling embryo survival. A decrease in permeability associated with accumulation of fine sediment lowered the survival rate of embryos by suffocation because the flux of DO that should be supplied to the embryo was severely limited. This situation might be created by the combined effects of an accumulation of fine sediment on the redd and a low DO concentration in the surface water because the DO concentration almost coincided with the intragravel DO.     

Ecological Effects of Metals in Streams on a Defense Materials Processing Site in South Carolina,USA

The Savannah River Site (SRS) is a 780 km² U.S. Department of Energy facility near Aiken, South Carolina, established in 1950 to produce nuclear materials. SRS streams are “integrators” that potentially receive water transportable contaminants from all sources within their drainage basins, necessitating a watershed approach to organize contaminant distribution data and characterize the effects of multiple contaminants on aquatic organisms. This study used several lines-of-evidence to assess the ecological effects of metals in SRS streams, including contaminant exposure models for apex predators and bioassessments of fish and macroinvertebrate assemblages. Concentrations of metals in sediments, fish, and water were elevated in streams affected by SRS operations, but contaminant exposure models for the river otter Lontra Canadensis and belted kingfisher Ceryle alcyon indicated that toxicological reference values were exceeded only by Hg and Al. Macroinvertebrate assemblage structure was unrelated to sediment metal concentrations. Fish assemblage data were inconclusive. This study indicated that (1) modeling studies and field bioassessments provide a complementary basis for addressing the individual and cumulative effects of contaminants, (2) habitat effects must be controlled when assessing contaminant impacts, (3) sensitivity analyses of contaminant exposure models can help to apportion sampling effort, and (4) most individual metals in SRS streams are unlikely to have significant ecological effects.     

From Demographic Strategies to Mathematical Models: Trends in Population Dynamics Studies of Aquatic Oligochaeta

The existence of a negative relationship between fine sediment infiltration during the incubation period and salmonid embryo survival has often been discussed in the literature. However, few studies have specifically addressed this relationship in the field. We conducted a field experiment to examine the relationship between survival of Atlantic salmon (Salmo salar) embryos contained in incubation baskets and the patterns of fine sediment infiltration into the baskets during the incubation period. The results indicate that survival to pre-eyed (STPE), eyed (STE) and hatched (STH) stages of development were all negatively correlated with the percentage of fine sediment entering the baskets. STPE and STE were most strongly affected by silts and clays (<0.063 mm) although this size class represented only a small fraction of the grain size distribution inside the incubation baskets (0.03–0.41%). STH was most strongly correlated with the infiltration of medium sand (0.25–0.50 mm) material. On average, 66% of the implanted embryos survived to the pre-eyed stage of development compared to 63% for the eyed and 48% for the hatched stages of development.     

A sensitive screening bioassay technique for the toxicological assessment of small quantities of contaminated bottom or suspended sediments

Biological impact assessment of sediment-bound contaminants is currently considered essential in addition to routine chemical characterization. Conventional methods of sediment bioassessment require relatively large quantities of the sample. When sample sizes are limited however, these methods become ineffective. To overcome this problem, the Limited Sample Bioassay (LSB) technique was developed. Bioassays conducted with bottom sediments and suspended particulates from western, central and Arctic regions of Canada indicated that the newly developed LSB technique successfully evaluated the contaminant/nutrient impact on laboratory-grown cultures of algae. The LSB method produced results which were comparable to those from standard elutriate bioassays conducted with natural phytoplankton size assemblages. The data suggest that the LSB can play an important role in providing a quick, simple, sensitive, and inexpensive screening technique for assessing the bioavailability of contaminants (or nutrients) from sediment of limited quantity.     

Specific organic components as tracers of contaminated fine sediment dispersal in Lake Ontario near Toronto

Bottom sediments around the outfall of the Humber Sewage Treatment Plant (STP), which, with the Humber River, comprises the major contaminant point source emptying into Humber Bay, Lake Ontario, were analyzed for a number of cultural and industrial organic contaminants, including sewage-related compounds such as the faecal sterol coprostanol, -tocopheryl acetate (-TA), linear-chain n-alkane hydrocarbons, and carbon and nitrogen isotope ratios of refractory sediment organic matter. The goal was to test these chemical markers as tracers of contaminated fine sediment transport. Although these chemical species are not all conservative (some decompose at fairly rapid rates), they are believed to be good natural tags for fine sediment and should nonetheless exhibit clear dispersal plumes from a presumed source. Their plumes can thus provide an effective way to obtain qualitative, intermediate- and long-term transport pathway indicators for contaminated sediments discharged on a continuing basis. The contoured plots for coprostanol, alpha-tocopheryl acetate, and n-alkane distribution were characterized by high values near the STP outfall, and these tracers were detectable at distances of 1 km or more. Interpretation of the net transport patterns indicates a primary transport toward the south and southwest, with a secondary trend northward, curving eastward. The carbon and nitrogen ratios, while showing a slightly different pattern, served to differentiate STP-source materials from those coming from the river and the open lake. Thus, transport from these sources, sometimes in the opposite direction to that from the main source, were resolved. Systematic variations in the interpreted transport patterns are explained by the presence of different pathways taken by the sediments, i.e. whether bedload or suspended load in a stratified water column.     

Habitat-Specific Effects of Fishing Disturbance on Benthic Species Richness in Marine Soft Sediments

Around the globe, marine soft sediments on continental shelves are affected by bottom trawl fisheries. In this study, we explore the effect of this widespread anthropogenic disturbance on the species richness of a benthic ecosystem, along a gradient of bottom trawling intensities. We use data from 80 annually sampled benthic stations in the Dutch part of the North Sea, over a period of 6 years. Trawl disturbance intensity at each sampled location was reconstructed from satellite tracking of fishing vessels. Using a structural equation model, we studied how trawl disturbance intensity relates to benthic species richness, and how the relationship is mediated by total benthic biomass, primary productivity, water depth, and median sediment grain size. Our results show a negative relationship between trawling intensity and species richness. Richness is also negatively related to sediment grain size and primary productivity, and positively related to biomass. Further analysis of our data shows that the negative effects of trawling on richness are limited to relatively species-rich, deep areas with fine sediments. We find no effect of bottom trawling on species richness in shallow areas with coarse bottoms. These condition-dependent effects of trawling suggest that protection of benthic richness might best be achieved by reducing trawling intensity in a strategically chosen fraction of space.     

Grain size and depth constraints on microbial variability in coastal plain subsurface sediments

We have examined the effects of sediment grain size and depth on the abundance and activity of aerobic bacteria at two coastal plain sites in Virginia. Samples were collected at centimeter intervals as well as meter intervals because fine‐scale sampling can be essential to assess microbial variability. At the Oyster site, grain size varied from 0.12 to 0.25 mm below 1.5 m depth and did not correlate with either bacterial abundance or activity. Perhaps due to the fairly uniform grain size at this site, variations in bacterial numbers were less than fivefold between replicate samples of 0,1 to 100 g and generally less than 15‐fold among closely spaced intervals (～5 cm). At the Abbott Pit site, grain size was about threefold greater (0.50 ± 0.17mm) in an interval of 4.35 to 5.0m below land surface than grain size in the surrounding sediments. In the same interval, bacterial abundance increased by 11‐fold and activity increased by 217‐fold relative to the surrounding sediments. Overall, grain size correlated significantly with bacterial abundance and activity below the soil zone at the Abbott Pit site. This suggests that changes in grain size, even at the centimeter scale, could have a predominant effect on microbial variability in sandy aquifers of the coastal plain. Besides grain size, depth correlated significantly with total organic carbon and bacterial abundance and activity at both sites, suggesting that depth is also an important factor controlling microbial variability in the subsurface environments.     

Phytoremediation in Wetland Ecosystems: Progress,Problems, and Potential

Assessing the phytoremediation potential of wetlands is complex due to variable conditions of hydrology, soil/sediment types, plant species diversity, growing season, and water chemistry. Conclusions about long-term phytoremediation potential are further complicated by the process of ecological succession in wetlands. This review of wetlands phytoremediation addresses the role of wetland plants in reducing contaminant loads in water and sediments, including metals; volatile organic compounds (VOC), pesticides, and other organohalogens; TNT and other explosives; and petroleum hydrocarbons and additives. The review focuses on natural wetland conditions and does not attempt to review constructed wetland technologies. Physico-chemical properties of wetlands provide many positive attributes for remediating contaminants. The expansive rhizosphere of wetland herbaceous shrub and tree species provides an enriched culture zone for microbes involved in degradation. Redox conditions in most wetland soil/sediment zones enhance degradation pathways requiring reducing conditions. However, heterogeneity complicates generalizations within and between systems. Wetland phytoremediation studies have mainly involved laboratory microcosm and mesocosm technologies, with the exception of planted poplar communities. Fewer large-scale field studies have addressed remediation actions by natural wetland communities. Laboratory findings are encouraging with regards to phytoextraction and degradation by rhizosphere and plant tissue enzymes. However, the next phase in advancing the acceptance of phytoremediation as a regulatory alternative must demonstrate sustained contaminant removal by intact natural wetland ecosystems.