Neck rot (Botrytis allii) of bulb onions

Experiments on neck rot of onions, caused by Botrytis allii showed that, although the disease only became evident in store, a major source of the pathogen was samples of infected seeds. In 1972 and 1973, 39·5 and 71·4% respectively of commercial onion seed samples tested at Wellesbourne were infected. The pathogen was internal in seed and persisted for 3 ½ yr in infected seeds kept in a seed store at 10°C and 50% r.h. Seedlings raised from diseased seeds became infected by mycelial invasion of the cotyledon leaf tips from seed-coats many of which remained attached to the cotyledons when seedlings emerged from the soil. The fungus attacked the living tissues of these leaves symptomlessly, producing conidiophores only after the leaf tissue senesced and became necrotic. Because the fungus was symptomless, the rate of spread of the pathogen in onion crops was assessed by incubating successive samples of plants from the field in humid conditions when infected tissues developed conidiophores of the fungus. This method showed that the disease was progressive in onion crops spreading more rapidly in wet humid conditions (e.g. 1972) than in dry ones (e.g. 1973). The principal means of spread were probably fungal spores; conidiophores bearing spores being produced abundantly on plants in the field under high humidity. The fungus invaded the leaves of plants successively, first infecting each leaf at the tip and then growing downwards in the tissues and eventually invading the neck of the onion bulb via the leaves which emerged directly from the top of the neck. By harvest, the fungus was situated deep within the neck tissues of infected maturing onion bulbs.     

Effect of Bacillus subtilis on Growth and Protection of Onion against White Rot

The effect of isolates of Bacillus subtilis applied as seed treatments on plant growth and white rot on three onion cultivars was studied for two seasons on muck soil of Fraser valley of British Columbia. The isolates of B. subtilis provided significant season-long protection against onion white rot on all three cultivars. The most effective isolate (BACT 2) protected the onion cultivar Autumn spice against onion white rot in both years. plant height, number of leaves per plant, and bulb weight were not affected by treating seeds with the Bacillus isolates. Bulb neck diameter of the cultivar Autumn Spice was significantly reduced by two isolates in both seasons.     

Identification of Fusarium species causing basal rot of onion in East Azarbaijan province,Iran and evaluation of their virulence on onion bulbs and seedlings

One of the economically important diseases of onion is the basal rot caused by various Fusarium species. Identification of the pathogenic species prevalent in a region is indispensable for designing management strategies, especially to develop resistant cultivars. Eighty Fusarium isolates are obtained from red onion bulbs on infected fields of East Azarbaijan province. Inoculating the onion bulbs with 38 selective isolates indicated that 17 isolates were pathogenic on onion. According to the morphological and molecular characteristics, these isolates were identified as F. oxysporum, F. solani, F. proliferatum and F. redolens. This is the first report of F. redolens on onion in Iran. On the other hand, the virulence of each pathogenic isolate was evaluated on onion bulbs and seedlings. F. oxysporum which causes severe rot and damping-off was considered as a highly virulent species in both conditions. While, F. proliferatum was considered as the most destructive on onion bulbs. Rot ability of F. solani was not considerable, and only the 4S isolate caused pre- and post-emergence damping-off more than 50%. Finally, F. redolens with less pathogenicity on onion bulbs was identified as the most virulent isolate on onion seedlings, which was explanatory of its importance on farm.     

Mechanism of action of the plant resistance inducer β-aminobutyric acid in <Emphasis Type="Italic">Allium cepa</Emphasis>

The mechanism of action of β-aminobutyric acid (BABA) as an inducer of resistance to the necrotrophic fungi Botrytis spp. in three different varieties of onion (Allium cepa) is investigated. It is shown that low concentrations of BABA are capable of inducing resistance in onion to neck rot induced by Botrytis allii and that induced by B. cinerea. By means of fluorescence microscopy it is established that treatment of the bulb of onion with BABA leads to priming defensive callose deposition, the principal mechanical barrier against penetration of the pathogen. However, the priming response was not discovered in the Sterling onion variety, which does not exhibit BABA-induced resistance to Botrytis fungi.     

Studies on the biology of Botrytis species on overwintered salad onions

In the years 1973/4–1974/5, Botrytis cinerea was responsible for losses of 26% and 37% respectively in overwintered salad (green) onion crops grown at Wellesbourne. The fungus invaded the tips of cotyledonary and young true leaves and then grew downwards and inwards through the leaf axils to colonise the internal tissues and produce a collar rot which caused plants to collapse and die. More direct infection of the junction between an older and younger leaf produced a similar effect. Symptoms were rarely noticeable (except occasionally in the later stages of the disease) and affected plants disappeared unobtrusively. The incidence of collar rot increased as the rate of leaf production fell with the drop in temperatures in winter months but decreased as leaf growth resumed with increases in temperature in the spring. The fungus grew and sporulated well at low temperatures (5°C) and more inoculated seedlings developed collar rot when maintained at simulated winter temperatures (7°C) than when kept at simulated spring temperatures (15°C). B. squamosa occurred spasmodically producing white leaf lesions but caused no loss of plants. B. allii although present at a low incidence did not increase in the crops but in common with B. cinerea caused some damage to the bases of plants at harvest.     

Nuclear changes in allium cepa in response to infection by fusarium moniliforme

Fusarium moniliforme was isolated [into culture] from white onion and inoculated into holes bored in onion bulbs. After 48 hrs, the nuclear dry mass of onion cells 0–5 mm ahead of the mycelium had decreased by 19% as determined by quantitative interference microscopy as compared to nuclear dry mass decreases of 11 % caused by avirulent Aspergillus niger, 26 % by an unidentified onion pathogen, 41 % by virulent Botrytis allii, and 42 % by virulent Aspergillus niger. In the present study, the nucleolar dry mass declined by 34 % in response to F. moniliforme under the same conditions. Degradation or exit of nuclear and nucleolar macromolecules in response to fungal products secreted in advance of mycelium may be responsible for lower nuclear and nucleolar dry mass.     

Biological control of onion neck rot (Botrytis aclada): Protection of wounds made by leaf topping

The efficacy of fungal antagonists in protecting onions from neck rot caused by Botrytis aclada was investigated. Leaf wounds made by topping of onions during harvest, which are considered as important entrance sites for B. aclada, were treated with conidial suspensions (5 × 10⁷ conidia ml^‐1) of antagonists. In field experiments with artificial inoculation with conidia of B. aclada, applications of Trichoderma viride during harvest reduced the incidence of neck rot, assessed after three months’ storage of the onions at 9° C, from 35% to 24% in 1989 and from 28% to 18% in 1990, when onions initially had been stored under favourable conditions for fungal development. Comparable results were obtained with T. hamatum and Gliocladium roseum. A bioassay based on wound treatment of detached onion leaves was developed to select further antagonists. From 40 candidate antagonists tested, 20 strains gave similar or better control than the strain of T. viride applied in the field experiments. Effective antagonists could be found amongst strains of Trichoderma spp. Gliocladium spp. and Penicillium spp. as well as amongst fungi such as Aureobasidium pullulans and yeasts isolated from green leaves of onion or rye.     

Fungicidal control of damping-off and seedling root rot in Brassica species caused by Rhizoctonia solani in the growth chamber*

Eight fungicides (benodanil, carboxin, cyproconazole, fenpropimorph, fur-mecyclox, iprodione, pencycuron and tolclofos-methyl) were evaluated, under growth chamber conditions, as seed treatments against pre-emergence damping-off and post-emergence seedling root rot in six Brassica species. Five cultivars of B. rapa, four cultivars of B. juncea, four cultivars of B. napus and one cultivar/ strain from each of B. carinata, B. nigra and B. oleracea were grown in soilless mix infested with an isolate of Rhizoctonia solani AG-2-1. B. nigra and B. juncea were considerably less susceptible to R. solani than the four other species. Cyproconazole at 0.05-0.1 g a.i./kg seed and the other fungicides at 2–4 g a.i./ kg seed provided almost complete control of pre-emergence damping-off in most Brassica species and their cultivars. Their efficacy varied against the post-emergence seedling root rot. Furmecyclox, iprodione, tolclofos-methyl and pencycuron consistently gave good control of seedling root rot in all Brassica species and their cultivars. Benodanil and fenpropimorph provided moderate control, and carboxin and cyproconazole gave poor control against root rot. Efficacy of carboxin, cyproconazole, benodanil and fenopropimorph against seedling root rot varied significantly (P ≤ 0.05) among cultivars within a Brassica species.     

Epidemiology of Cladosporium allii and Cladosporium allii-cepae, leaf blotch pathogens of leek and onion.

Conidia of Cladosporium allii and C. allii-cepae germinated over the temperature range 2–30°C on agar with optimal responses at 15–20°C (C. allii) and 20°C (C. allii-cepae). Conidia of both fungi germinated in water and at c. 100% relative humidity (r.h.) but not at lower humidities on leaf and glass slide surfaces. Germination was more rapid when spores were applied dry to agar or leaves than when applied in water or nutrient solution. More lesions developed when conidia of C. allii-cepae were deposited dry on onion leaf discs or leaf surfaces than when they were applied suspended in water. Conidia of both fungi required 18–20 h at c. 100% r.h. to germinate and infect when applied dry to leaves. Damaging the leaves or the addition of nutrients to the leaf surface increased the incidence of infection by C. allii-cepae compared to controls. Inoculated onion bait plants placed out-of-doors developed infection after at least 17 h at c. 100% r.h. or with leaf wetness. Similar conditions were necessary for infection of bait plants exposed in onion and leek crops infected by C. allii-cepae and C. allii respectively. Disease development and spread of infection occurred at different rates over the same period in two different cultivars of leeks, with spore concentrations increasing in proportion to disease. Spore numbers in the air fell considerably when infected leeks were ploughed under.     

Determination of Onion yellow dwarf virus concentration levels on onion bulb and leaf by double-antibody sandwich enzyme-linked immunosorbent assay (DAS-ELISA)

With the aim of understanding virus movement and fluctuations in the virus concentration in bulb and leaves of onion (Allium cepa L.) plants after infection, Onion yellow dwarf virus (OYDV) was analysed by double-antibody sandwich enzyme-linked immunosorbent assay (DAS-ELISA). OYDV concentrations were higher in onion leaves of plants grown from tested bulbs compared with bulbs, although the virus was successfully detected in bulb of onion.     

The effect of treating seed potato tubers with benzimidazole, imidazole and phenylpyrrole fungicides on the control of rot and skin blemish diseases

Over 6 yr the effectiveness of imazalil, prochloraz and fenpiclonil, applied either alone or in a mixture, in controlling gangrene, dry rot, skin spot and silver scurf on potato tubers in store was compared with that of 2-aminobutane and thiabendazole. An assessment was also made of their efficiency in controlling the development of these diseases on the daughter tubers of seed tubers treated at harvest or before planting. Overall, 2-aminobutane was more effective in controlling gangrene (Phoma foveata) in store than the spray-applied fungicides. Deposits of imazalil, thiabendazole and fenpiclonil were greater when sprays were applied with an electrostatic sprayer than with a hydraulic sprayer. The opposite was found with the mixture of prochloraz Mn and tolclofos-methyl. More effective gangrene control was associated with the highest deposits. Fenpiclonil and the mixture of thiabendazole and imazalil were more effective in controlling dry rot (Fusarium solani var. coeruleum) than imazalil alone. The development of dry rot was, however, increased by 2-aminobutane treatment on eight out of 14 stocks. 2-aminobutane gave the greatest reduction (83%) in the severity of skin spot during storage whereas thiabendazole alone, and the mixture of thiabendazole and imazalil, gave mean reductions of 70% and 65% respectively. This mixture and fenpiclonil gave the greatest reduction in the severity of silver scurf although, in general, reductions in silver scurf with fungicide treatment were less than with skin spot. The type of sprayer used to apply a fungicide did not affect the effectiveness of the fungicides in controlling either skin spot or silver scurf on tubers in store, or on the daughter tubers. The incidence of gangrene and dry rot on daughter tubers was not reduced consistently by fungicide treatment of seed tubers of the six stocks tested. However, the severity of skin spot and silver scurf was reduced by fungicide treatments of all eight stocks but the reduction in disease was greater for skin spot than for silver scurf. All fungicides gave reductions in the severity of skin spot, and fenpiclonil and the mixture of thiabendazole and imazalil were the most effective for silver scurf. The effectiveness of the fungicides in controlling these diseases was similar for seed treated at harvest and that treated before planting.     

A new record of the tobacco thrips <Emphasis Type="Italic">Frankliniella fusca</Emphasis> (Hinds) (Thysanoptera: Thripidae) from Japan

The tobacco thrips, Frankliniella fusca, which is known as a vector of TSWV and Pantoea ananatis causing center rot of onion, and a serious pest of tobacco, cotton and groundnuts in North America, is newly recorded from the bulbs of Narcissus pseudonarcissus in Honshu, mainland Japan. Two strains were found in Shimane Prefecture. One strain was collected from a bulb produced in Niigata Prefecture in the winter of 2002, and the other was collected from bulbs produced in Fukushima Prefecture in the autumn of 2002. F. fusca can be easily distinguished from other members of this genus in Japan.     

Development and evaluation of an enzyme-linked immunosorbent assay (ELISA) and dot immunobinding assay (DIBA) for the detection of Ganoderma infecting palms

The genus Ganoderma has a worldwide distribution causing root and stem rot of many plantation crops. A limiting factor in controlling the BSR disease is the lack of reliable diagnostic method(s) for early diagnosis. In this study, we developed polyclonal antiserum for Ganoderma mycelial and extracellular protein, and evaluated its efficacy with different plant samples collected from artificially inoculated coconut seedlings and Ganoderma infected field palms. We also tested the cross-reactivity with the soil-borne and saprophytic fungus collected from different parts of coconut palm. The antisera developed against the crude mycelial protein (CMP) and extracellular protein (ECP) showed a 1:1000 titre value for the detection of Ganoderma. The CMP antisera developed showed more cross-reaction when compared to ECP antisera of Ganoderma. In the DIBA test, at a 1:10 dilution of antigen, 1:1000 dilution of CMP and ECP antisera, 1:5000 dilution of secondary antibody gave clear distinctions in colour development between healthy and diseased samples. In the DIBA test, ECP antisera detected positive control (ECP of Ganoderma MTP and CRS-1 isolate), artificially inoculated roots, infected field roots, infected basal trunk and additionally lesions gave positive reactions which were not found in the CMP antisera tested. Therefore, both ELISA and DIBA tests may be useful for screening a large number of samples and help in the detection of infection at the earliest stage of disease development and this will certainly help to adopt suitable management strategies against Ganoderma disease in palm crops in advance.     

Control of stem nematode, Ditylenchus dipsaci, in onions, by granular nematicides applied to the soil

Aldicarb at 1.4–5.6 kg a.i. ha^-l or oxamyl at 1.3–5.2 kg a.i. ha^-1 applied over the seed furrows during sowing prevented much of the damage resulting from stem nematode attack in spring-sown onions. Rotting of bulbs in store due to stem nematode infestation was sometimes lessened by these treatments. Neither sowing onion seeds on soil ridges, nor applying aldicarb in two equal doses, one over the seed furrows during sowing, the other over the plants mid-season, controlled the nematode better or increased onion yields more than a single equivalent dose over the seed furrows. Applied as two doses in this way, aldicarb was sometimes more effective against the nematode in summer-sown onions than was an equivalent amount applied over the seed furrows during sowing. Only 2.5 kg or less aldicarb ha^-1 can be applied to onions without leaving unacceptable residues (>0.15 μg g^-1) in the harvested bulbs.     

Induction of defence-related enzymes in onion by combined application of fungal and bacterial biocontrol agents against Fusarium oxysporum f. sp. cepae

Basal rot disease of onion is a major problem in different onion growing regions of Tamil Nadu, India. Fungal and bacterial cultures were isolated and tested their efficiency against Fusarium oxysporum f. sp. cepae under in vitro conditions. Effective bacterial and fungal antagonists were tested alone and in combinations for the control of F. oxysporum f. sp. cepae in glasshouse experiments. Defence-related enzymes such as peroxidase, polyphenol oxidase and phenylalanine ammonia-lyase were induced and accumulated in onion treated with fungal and bacterial antagonists. Defence-related enzymes were significantly higher in onion pretreated with consortial formulation of Pf12 + Pf27 + TH3 at 5 days after the challenge inoculation with F. oxysporum f. sp. cepae and gave resistance to onion against basal rot disease.     

Induced tolerance of Sclerotium cepivorum to antibiotics in the presence of onion exudates

The onion white rot pathogen Sclerotium cepivorum was cultured on agar media containing 2% malt extract and one of the antifungal antibiotics, endomycin, griseofulvin, venturicidin and cycloheximide at concentrations that reduced but did not prevent growth of mycelium. When onion seeds or agar discs impregnated with diffusates from onion bulbs were placed on the antibiotic media, radial growth of the fungus was greatly increased, and there was a profuse development of aerial mycelium. Gaseous diffusates from onion tissue and from impregnated agar discs were also effective. On the antibiotic media, tomato, cabbage and radish seeds did not stimulate the growth of S. cepivorum and the onion exudates did not stimulate the growth of four other fungi. This and other evidence is considered to show that the stimulation of growth of S. cepivorum was not caused by any direct effect on the antibiotics but by a tolerance of the fungus to them, which was specifically induced by an exudate from its host plant. The phenomenon may be related to the reported reversal by onion extracts of the inhibitory effects of soil mycostasis on germination of sclerotia of the fungus.     

Bean seed fly (Delia platura, Delia florilega) and onion fly (Delia antiqua) incidence in England and an evaluation of chemical and biological control options

Bean seed fly and onion fly are significant pests of alliaceous crops in the UK. Their activity was monitored using yellow water traps at three field sites in England in 2002 and 2003. Bean seed fly were not split between Delia platura or Delia florilega because from the growers point of view control measures are independent of species. The traps were effective at catching bean seed fly, which was present from April until September. A total of 1729 bean seed fly were trapped in 2002 and 4501 in 2003, with peak activity in May in both years. In 2003, there appeared to be three to four peaks in abundance of the pest. Only 113 onion flies were trapped in 2002 and 23 in 2003. More male onion fly were trapped than females. Pot experiments were carried out to evaluate efficacy of a range of insecticides, garlic and two parasitic nematode species (Steinernemafeltiae and Steinernema kraussei) against bean seed fly and onion fly. Pots of salad onions were exposed to natural oviposition by bean seed fly, but the onion fly experiment was carried out in a glasshouse with eggs of the pest being inoculated into the pots. Tefluthrin seed treatment appeared to be especially effective at preventing bean seed fly damage and produced the most robust seedlings but did not appear to kill the larvae. A drench of chlorpyrifos at the ‘crook’ stage gave 100% control of bean seed fly larvae. A chlorpyrifos drench was the only treatment to give effective control of onion fly. There was some evidence that the parasitic nematode S. feltiae reduced numbers of bean seed fly larvae by about 50%. Guidelines for control of both bean seed fly and onion fly are discussed.     

Effect of some antibiotics on Sclerotium cepivorum Berk., the cause of white rot of onion

The effect of some antibiotics onSclerotium cepivorum, the cause of white rot of onion was studied in agar culture and soil. The growth ofS. cepivorum was inhibited in Czapek Dox yeast agar containing 50µg of gliotoxin, viridin, actidione and 100µg of patulin per ml of the medium. Lower concentrations of the antibiotics retarded the growth of the fungus. In soil, patulin had no effect in the control ofS. cepivorum infection of onion seedlings. Concentration of actidione of 5µg/g of soil completely controlled white rot infection but severely stunted the growth of onion seedlings; 40µg/g of actidione killed the seedlings. Despite the importance of actidione as a fungistatic agent its use on onion is limited by its phytotoxicity.     

Fusarium avenaceum and Fusarium crookwellens cause onion basal rot in Iran

Abstract

Basal rot is the main and economically soil-borne disease of onion that caused by various Fusarium species worldwide. To identify the prevailing Fusarium species, 140 Fusarium isolates were obtained from red onion bulbs farms in 10 regions of East and West Azarbaijan provinces in 2015. By inoculating 80 selected isolates, 40 of them were pathogenic on onion. These 40 isolates were identified as F. oxysporum with 43.62%, F. subglutinans with 44%, F. culmorum with 50.66%, F. avenaceum with 51%, F. solani with 42.41%, F. crookwellens with 55%, F. proliferatum with 47.16% and F. redolens with 55.5% virulence. Their frequency were 20%, 2.5%, 7.5%, 5%, 42.5%, 2.5%, 15% and 5%, respectively. Forty studied isolates demonstrating that, 14.2% were highly virulent, 26.1% virulent, 40.3% moderately virulent and 19.4% weakly virulent. This is the first report of F. avenaceum and F. crookwellens as the causal agents of red onion basal rot in Iran.     

Application of actinomycetes as biocontrol agents in the management of onion bacterial rot diseases

This study was conducted to achieve biological control for the post-harvest onion bacterial rot diseases with the aid of Egyptian isolates of actinomycetes. In this respect, 45 actinomycetes strains were isolated from Egyptian soils and screened for their antagonistic effect against onion bacterial rot pathogens; Erwinia carotovora subsp. carotovora and Burkholderia cepacia. The most two active strains were identified based on their cultural, morphological and molecular properties as Streptomyces lavendulae HHFA1 and Streptomyces coelicolor HHFA2, the latter was most potent and so was used in vivo (pots and field) for controlling onion bacterial rot. S. coelicolor HHFA2 application resulted in enhancement in the photosynthetic pigments and some foliar growth parameters of onion plants confirming its growth promoting effect. The results of the post-harvest estimation of the disease incidence (DI) of the onion bacterial rot throughout storage revealed that, the application of S. coelicolor HHFA2 reduced the DI pronouncedly comparing with the untreated control and confirm its successful role in the biological control of onion bacterial rot diseases.