Quantitative trait locus analysis of growth-related traits in a new Arabidopsis recombinant inbred population

Arabidopsis natural variation was used to analyze the genetics of plant growth rate. Screening of 22 accessions revealed a large variation for seed weight, plant dry weight and relative growth rate but not for water content. A positive correlation was observed between seed weight and plant area 10 d after planting, suggesting that seed weight affects plant growth during early phases of development. During later stages of plant growth this correlation was not significant, indicating that other factors determine growth rate during this phase. Quantitative trait locus (QTL) analysis, using 114 (F9 generation) recombinant inbred lines derived from the cross between Landsberg erecta (Ler, from Poland) and Shakdara (Sha, from Tadjikistan), revealed QTLs for seed weight, plant area, dry weight, relative growth rate, chlorophyll fluorescence, flowering time, and flowering-related traits. Growth traits (plant area, dry weight, and relative growth rate) colocated at five genomic regions. At the bottom of chromosome 5, colocation was found of QTLs for leaf area, leaf initiation speed, specific leaf area, and chlorophyll fluorescence but not for dry weight, indicating that this locus might be involved in leaf development. No consistent relation between growth traits and flowering time was observed despite some colocations. Some of the QTLs detected for flowering time overlapped with loci detected in other recombinant inbred line populations, but also new loci were identified. This study shows that Arabidopsis can successfully be used to study the genetic basis of complex traits like plant growth rate.     

根尖分生组织细胞核大小:一个可能用于植物入侵性评估的新指标(英文)

植物的入侵性与DNA C-值之间存在统计学上的负相关关系。在这种关系中,细胞和细胞核大小可能起关键作用,因此我们推测分生组织细胞核大小在评估植物或至少某些分类群的入侵性方面有潜在的应用价值。本研究以豌豆属(Vicia)5种入侵能力不同的植物为材料,观察了它们的分生组织染色体、细胞核和细胞大小以及有丝分裂速率,同时测定了种子产量、单位种子干重产生的幼苗生物量(近似于幼苗相对生长速率)和生活史的长短。结果显示根尖分生区细胞核较小的植物细胞较小,细胞分裂速率快,单位种子干重产生的幼苗生物量高,种子小而数量多,生活史短。这些结果表明5种豌豆属植物中分生组织细胞核较小的倾向于具有较高的入侵性,其原因主要是:(1)能够产生小而多的种子;(2)具有较高的有丝分裂速率、相对较快的幼苗生长速率和短的生活史。分生组织细胞核大小影响植物入侵性与DNA C-值的作用是一致的,在植物入侵性评估模型中,分生组织细胞核大小在评估植物入侵性方面可能具有潜在的应用价值,而且其测定方便、费用低廉。但是,这一指标的应用范围和条件需要进一步筛选。     

Ecological and evolutionary consequences of spatial and temporal variation in pre-dispersal seed predation

Pre-dispersal seed predation may have important effects on population dynamics and trait evolution in plants. In this review, we first present a conceptual framework of the strength of pre-dispersal seed predation and its variation in space and time. We consider the interaction between plants and their seed predators to be “strong” when it affects plant population dynamics or causes changes in plant trait–fitness relationships, and “weak” when it has no such effects, and propose ways of how to adequately assess these effects. Second, we review the ecological literature between 1991 and 2005 to evaluate documented effects of pre-dispersal seed predation on plants and draw five major conclusions. (1) Pre-dispersal seed predation rates are usually low but sometimes high, and show a considerable variation in space and time. (2) Direct evidence suggests that pre-dispersal seed predation can have a significant effect on recruitment and plant population growth rate. Accumulating evidence of seed-limited recruitment suggests that such effects are common. (3) Pre-dispersal seed predation affects selection on several plant traits, such as flowering phenology and flower number, which are usually interpreted mainly in the context of plant–pollinator interactions. (4) The patterns of variation in the interactions between plants and pre-dispersal seed predators suggest that geographic selection mosaics may be common. (5) Although there are numerous studies estimating seed predation, there are still rather few studies that have aimed at examining the interaction explicitly in terms of effects on plant population dynamics and trait selection. From these we know that seed predators can have important, and often variable, effects on plant population dynamics and trait evolution. However, it still remains to assess how important they are across study systems and relative to other aspects of the plant's biotic and abiotic environment.     

水稻开花期调控的分子机理研究进展

水稻准确地感知外部环境信号,通过内部复杂的基因网络做出反应,在一年中最适合的时候开花繁殖。与长日促进长日模式植物拟南芥开花相反,短日促进短日模式植物水稻开花。通过对水稻和拟南芥的开花期调控机理的对比分析,发现水稻和拟南芥有着一些相对保守的开花期控制基因,其调控机理也是相似的。另外,水稻也有一些独特的开花期控制基因和开花途径。本文着重从光周期对水稻开花期的调控途径和作用机理角度进行了阐述,并对水稻开花期的自然变异与其育种应用、生物钟关联基因、光中断现象和临界日长现象以及开花期与产量的关系进行了总结。     

可变剪接调控植物开花的作用机制进展

开花是植物生长发育的关键转折,与种子生产和作物产量密切相关。开花转变受到复杂的基因网络调控,许多开花相关基因通过可变剪接产生多种转录本,调控开花时间。文中从多个角度系统地综述了可变剪接调控植物开花的分子机制,并对将来的研究进行了展望。     

Assessment of ICCV 2?×?JG 62 chickpea progenies shows sensitivity of reproduction to salt stress and reveals QTL for seed yield and yield components

Salinity is a complex abiotic stress and understanding the physiological and genetic basis of salinity tolerance is a prerequisite for improving existing crop cultivars. Experiments were undertaken using 126 recombinant inbred lines from a cross between JG 62 (tolerant) and ICCV 2 (sensitive) to characterize traits related to seed yield differences under saline conditions and to map quantitative trait loci (QTL). The population segregated for flowering time and entries were separated into ??early?? and ??late?? phenology groups to undertake the analysis. In both groups seed yield varied under salinity, with seed number being the most closely related trait to yield. In contrast, seed yield was not related to 100-seed weight or flowering time. Shoot dry weight was positively correlated with seed yield in the early entries only, but had no significant relationship with seed number. The higher sensitivity to salinity of the early entries was related both to a smaller biomass and lesser seed number under saline conditions. A QTL for seed yield under saline conditions was found in linkage group 3 in the late group, and a cluster of QTL for seed yield components in linkage group 6, including a QTL for seed number which explained 37% of the variation. In contrast, no QTL for seed yield was found in the early group, but a QTL for seed number under saline conditions was found. These data indicate that salinity tolerance traits are linked to the degree of earliness in chickpea. Tolerance is determined by the success of reproductive sites in both early and late entries, which relates in part to constitutive traits, and by the capacity of maintaining growth in early-flowering lines only. This is the first report of QTL for seed yield and seed number in chickpea exposed to salinity.     

Flowering phenology and reproduction of a forest understorey plant species in response to the local environment

Temperate forest understorey plants are subjected to a strong seasonality in their optimal growing conditions. In winter and early spring, low temperatures are suboptimal for plant growth while light becomes limited later in spring season. We can thus expect that differences in plant phenology in relation to spatiotemporal environmental variation will lead to differences in reproductive output, and hence selection. We specifically studied whether early flowering, a paradoxical pattern that is observed in many plant species, is an adaptive strategy, and whether selection for early flowering was confounded with selection for flower duration or was attributable to environmental variables. We used Geum urbanum as a study species to investigate the effect of relevant environmental factors on the species’ flowering phenology and the consequences for plant reproductive output. We monitored the phenology of four to six plants in each of ten locations in a temperate deciduous forest (Belgium). We first quantified variation in flowering time within individuals and related this temporal variation to individual flower reproductive output. Then, we studied inter-individual variation here-in and linked this to reproduction at the plant level, hence studying the selection differential. We found that flowering within individual plants of Geum urbanum was spread over a long period from June to October. Reproductive output of individual flowers, measured as total seed mass per flower, declined during the season. We found no indication for selection for early flowering but rather for longer flower duration. Larger plants had an earlier flowering onset and a higher seed mass, which suggests that these factors covary and are condition dependent. None of the studied environmental variables could explain plant size, although soil pH and to a lesser extent light availability had a positive direct effect on seed mass per plant. Finally, we suggest that the high intra-individual variation in flowering time, which might be a risk spreading strategy of the plant in the presence of seed predation, limits the potential for selection on flowering phenology.

     

When resources don't rescue: flowering phenology and species interactions affect compensation to herbivory in Ipomopsis aggregata

The ability of plants to tolerate, or compensate for, herbivore damage is highly variable and has been the subject of much research. Although many plants can compensate for herbivore damage, and some even overcompensate, we cannot yet generalize about the conditions that promote a positive response to damage. Here, we asked how abiotic resources (i.e. plant nutrient status) coupled with biotic interactions – i.e. subsequent interactions with pollinators, seed predators and nectar robbing bumble bees – affect the compensatory ability of Ipomopsis aggregata, a monocarpic herb that has been the subject of much previous debate. We hypothesized that compensation to herbivore damage in I. aggregata (Polemoniaceae) would depend first on plants having an ample supply of resources and, second, on the outcome of subsequent interactions with mutualist pollinators and enemy pre‐dispersal seed predators and nectar robbing bumble bees. We used a fully‐factorial experiment in which plants were watered, fertilized or left as unmanipulated controls, crossed with clipping to simulate herbivore damage to the apical meristem. Resource addition enhanced both male and female components of fitness, but resource enhancement did not provide the means for plants to fully compensate for simulated herbivory. Clipped plants produced significantly more inflorescences, but at the expense of a delay in flowering and fewer total flowers. Clipping significantly reduced losses to dipteran pre‐dispersal seed predators by delaying flowering time, but early flowering plants produced higher numbers of seeds despite incurring higher rates of predation. Clipped plants incurred a higher risk to nectar robbers in one of two years. Overall, clipped plants suffered severe reductions (a nearly 50% reduction in total seed set) in female success, but clipping combined with nutrient addition enhanced male function through increases in per‐flower pollen production. However, because clipped plants produced significantly fewer flowers than unclipped plants, whole‐plant pollen production was significantly reduced by clipping. Pollinator visitation and nectar robbing were variable between clipping treatments and between years and (nectar robbing) among sites. Our results demonstrate that the variability in plant response to herbivory can, at least in part, be driven by plant interactions with mutualists and enemies. Thus, accounting for such interactions and their variability is important to fully understanding plant compensation for herbivore damage and will likely go far to explain variation in plant response that appears to be independent of resources.     

Effects of Waterlogging on Nitrogen Accumulation and Alleviation of Waterlogging Damage by Application of Nitrogen Fertilizer and Mixtalol in Winter Rape (Brassica napus L.)

A study on the physiological and yield effects of waterlogging and the alleviation of waterlogging damage by the application of nitrogen fertilizers and mixtalol in winter rape was conducted in experimental tanks especially designed for controlling soil moisture content. The results showed that waterlogging at the seedling and stem elongation stages causes a significant decrease in nitrogen content and rate of nitrogen accumulation. Leaf chlorophyll content, superoxide dismutase and catalase activities, and root oxidizability (capacity for root oxidation) and root exudate were also reduced by waterlogging. The experiments confirmed that the physiological function of rape plants was retarded during the time of waterlogging at the seedling stage, and its adverse effects remained. Plant height, stem width, and the number of primary branches per plant were decreased significantly by waterlogging at the seedling and stem elongation stages. Pods per plant and seeds per pod were also reduced significantly, giving a 21.3 and 12.5% decrease of seed yield from the control for treatments at the seedling and stem elongation stages, respectively. Foliar sprays of nitrogen fertilizers at the seedling stage or mixtalol at the flowering stage alleviated plant damage caused by waterlogging by retarding chlorophyll and nitrogen degradation, increasing superoxide dismutase and catalase activities and root oxidizability, and improving yield components and seed yield of waterlogged plants. Therefore, besides draining off water, alleviation of waterlogging damage may be controlled by applying nitrogen fertilizer and a suitable plant growth regulator at appropriate growth stages. Received July 3, 1996; accepted December 26, 1996     

水稻籽粒激素对产量和品质的调控效应研究进展

水稻籽粒激素含量甚微,却能有效调控产量与品质的形成。该文主要对近年来国内外有关水稻籽粒中激素(IAA、GA1+4、Z、ZR、iPA、ABA、ETH)含量在不同环境下的变化规律、各激素及其互作对水稻籽粒产量和品质性状的调控效应和调控机理进行综述,并讨论了该领域未来的研究重点和方向,为今后相关研究提供信息参考。     

The biotron breeding system: a rapid and reliable procedure for genetic studies and breeding in rice

Oryza sativa is widely used as a model organism for many aspects of research in monocots and cereals. However, it has certain disadvantages as a model species compared with Arabidopsis thaliana, the eudicot species most widely used in plant sciences: first, it has a long cultivation time; and second, it requires considerably more space for growth. Here, we introduce a biotron breeding system, which allows rapid and reliable rice cultivation using a well-equipped artificial environmental chamber. This system involves use of regulation of CO? levels, removal of tillers and embryo rescue to overcome the disadvantages of rice cultivation. The rice cultivars Nipponbare, Koshihikari, Taichung 65 and Kasalath all showed vigorous growth and sufficient seed production in the biotron breeding system with accelerated flowering time. Nipponbare, which was the earliest among these cultivars, flowered at about 50 d after sowing. The life cycle of these plants could be further shortened using an embryo rescue technique on immature seeds at 7 d after pollination, thereby avoiding the lengthy process of seed maturation. Overall, it was possible to shorten the life cycle of Nipponbare to about 2 months under the controlled conditions. Furthermore, controlled crosses, which can be difficult with conventional cultivation methods, were easy to perform as we could control the exact timing of anther dehiscence. Thus, our biotron breeding system offers a valuable new approach to genetic and breeding studies in rice.     

Priming of field-sown rice seed enhances germination, seedling establishment, allometry and yield

Poor seedling establishment is a major deterrent in adopting direct seeding of rice. Seed priming to obtain better crop stand could be an attractive approach. The objective of this study was to determine the effectiveness of seed priming strategies on the improved agronomic characters of direct-sown rice. Seed priming strategies were: hydropriming for 48 h, osmohardening with KCl or CaCl₂ for 24 h, ascorbate priming for 48 h and seed hardening for 24 h, pre-germination (traditional soaking for nursery raising) and untreated control. Seed priming improved germination and emergence, allometry, kernel yield, and its quality, whilst pre-germination displayed poor and erratic emergence of seedling followed by poor plant performance. Faster and uniform emergence was due to improved α-amylase activity, which increased the level of soluble sugars in the primed kernels. Osmohardening with KCl gave greater kernel and straw yield and harvest index, followed by that of CaCl₂, hardening and ascorbate priming. Improved yield was attributed principally to number of fertile tillers and 1000 kernel weight. A positive correlation between mean emergence time and days to heading, while a negative one between kernel yield and harvest index suggested long-term effects of seed priming on plant growth and development. The results suggest that physiological changes produced by osmohardening enhanced the starch hydrolysis and made more sugars available for embryo growth, vigorous seedling production and, later on, improved allometric, kernel yield and quality attributes.     

Genetic analysis for drought resistance of rice at reproductive stage in field with different types of soil

Drought resistance of rice is a complex trait and is mainly determined by mechanisms of drought avoidance and drought tolerance. The present study was conducted to characterize the genetic basis of drought resistance at reproductive stage in field by analyzing the QTLs for drought response index (DRI, normalized by potential yield and flowering time), relative yield, relative spikelet fertility, and four traits of plant water status and their relationships with root traits using a recombinant inbred population derived from a cross between an indica rice and upland rice. A total of 39 QTLs for these traits were detected with individual QTL explained 5.1–32.1% of phenotypic variation. Only two QTLs for plant water status were commonly detected in two environments, suggesting different mechanisms might exist in two types of soil conditions. DRI has no correlation with potential yield and flowering time under control, suggesting that it can be used as a good drought resistance index in field conditions. The co-location of QTLs for canopy temperature and delaying in flowering time suggested a usefulness of these two traits as indexes in drought resistance screening. Correlation and QTL congruence between root traits and putative drought tolerance traits revealed that drought avoidance (via thick and deep root traits) was the main genetic basis of drought resistance in sandy soil condition, while drought tolerance may play more role in the genetic basis of drought resistance in paddy soil condition. Therefore, both drought mechanisms and soil textures must be considered in the improvement of drought resistance at reproductive stage in rice.     

Plant responses to carbon dioxide

The average atmospheric concentration of CO₂ will probably double before the end of next century. Many of the consequences for plant growth can and should be determined now. In this review the effects of [CO₂] on a variety of plant processes are summarized: stomatal opening and closing; stomatal density; respiration; root morphogenesis; and flowering. The effects of growth under elevated [CO₂] on crop yield and seed composition are also discussed. Adverse effects on the composition of C₃ cereal grains are clearly indicated.     

Effects of simulated acid rain on oilseed rape (Brassica napus) physiological characteristics at flowering stage and yield

A pot experiment was conducted to study the effects of different acidity simulated acid rain on the physiological characteristics at flowering stage and yield of oilseed rape (B. napus cv. Qinyou 9). Comparing with the control (pH 6.0), weak acidity (pH = 4.0-5.0) simulated acid rain stimulated the rape growth to some extent, but had less effects on the plant biomass, leaf chlorophyll content, photosynthetic characteristics, and yield. With the further increase of acid rain acidity, the plant biomass, leaf chlorophyll content, photosynthetic rate, antioxidative enzyme activities, and non-enzyme antioxidant contents all decreased gradually, while the leaf malonyldialdehyde (MDA) content and relative conductivity increased significantly. As the results, the pod number per plant, seed number per pod, seed weight, and actual yield decreased. However, different yield components showed different sensitivity to simulated acid rain. With the increasing acidity of simulated acid rain, the pod number per plant and the seed number per pod decreased significantly, while the seed weight was less affected.     

Ozone affects gas exchange, growth and reproductive development in Brassica campestris (Wisconsin fast plants)

Exposure to ozone (O(3)) may affect vegetative and reproductive development, although the consequences for yield depend on the effectiveness of the compensatory processes induced. This study examined the impact on reproductive development of exposing Brassica campestris (Wisconsin Fast Plants) to ozone during vegetative growth. Plants were exposed to 70 ppb ozone for 2 d during late vegetative growth or 10 d spanning most of the vegetative phase. Effects on gas exchange, vegetative growth, reproductive development and seed yield were determined. Impacts on gas exchange and foliar injury were related to pre-exposure stomatal conductance. Exposure for 2 d had no effect on growth or reproductive characteristics, whereas 10-d exposure reduced vegetative growth and reproductive site number on the terminal raceme. Mature seed number and weight per pod and per plant were unaffected because seed abortion was reduced. The observation that mature seed yield per plant was unaffected by exposure during the vegetative phase, despite adverse effects on physiological, vegetative and reproductive processes, shows that indeterminate species such as B. campestris possess sufficient compensatory flexibility to avoid reductions in seed production.     

Snow tussocks, chaos, and the evolution of mast seeding

One hitherto intractable problem in studying mast seeding (synchronous intermittent heavy flowering by a population of perennial plants) is determining the relative roles of weather, plant reserves, and evolutionary selective pressures such as predator satiation. We parameterize a mechanistic resource-based model for mast seeding in Chionochloa pallens (Poaceae) using a long-term individually structured data set. Each plant's energy reserves were reconstructed using annual inputs (growing degree days), outputs (flowering), and a novel regression technique. This allowed the estimation of the parameters that control internal plant resource dynamics, and thereby allowed different models for masting to be tested against each other. Models based only on plant size, season degree days, and/or climatic cues (warm January temperatures) fail to reproduce the pattern of autocovariation in individual flowering and the high levels of flowering synchrony seen in the field. This shows that resource-matching or simple cue-based models cannot account for this example of mast seeding. In contrast, the resource-based model pulsed by a simple climate cue accurately describes both individual-level and population-level aspects of the data. The fitted resource-based model, in the absence of environmental forcing, has chaotic (but often statistically periodic) dynamics. Environmental forcing synchronizes individual reproduction, and the models predict highly variable seed production in close agreement with the data. An evolutionary model shows that the chaotic internal resource dynamics, as predicted by the fitted model, is selectively advantageous provided that adult mortality is low and seeds survive for more than 1 yr, both of which are true for C. pallens. Highly variable masting and chaotic dynamics appear to be advantageous in this case because they reduce seed losses to specialist seed predators, while balancing the costs of missed reproductive events.     

Genesis of cells of apical meristems and realization of gametophytic apomixis in flowering plants

Based on our own and literature data on peculiarities of caryotypical variability, we concluded that gametophytic apomixis is naturally accompanied with phenomena of poly-, aneu-, and mixoploidy and that apomicts have genome instability manifesting at the level of meristematic somatic cells. In this connection, a hypothesis is substantiated that realization of this mode of seed reproduction in flowering plants is caused by modification of systems of cell cycle control, following after acts of hybridogenesis and/or polyploidization. It is concluded that instability of the seed reproduction system by gametophytic apomixis manifests not only at the stage of choice of a seed reproduction pathway (apomeiosis-euspory; apozygosis-zygosis) but also in all the cycles of reproduction of the cells of a germ line in plant ontogenesis.     

Effect of Asahi SL on China aster ‘Aleksandra’ seed yield, germination and some metabolic events

The effects of Asahi SL (sodium ortho and para-nitro phenolate, sodium 5 nitro guaiacolate) sprays on China aster plant height, seed yield and some metabolic events were investigated. The plants were sprayed with Asahi SL, in concentration of 0, 0.1, 0.2 or 0.4 %, three times before or during flowering, and six times before and during this stage. It was found that Asahi SL applied three times during flowering brought about an increase in the seed yield, germination and metabolic activity and did not modify vegetative growth of plants. The chemical used earlier, before flowering, had detrimental effect on seed yield and quality, although it stimulated vegetative growth. The positive effect of Asahi SL was more prominent in weather conditions unfavourable for seed production.     

Estimates of broad-sense heritability for seed yield and yield criteria in faba bean (Vicia faba L.)

Eight faba bean (Vicia faba L.) genotypes were grown at lowlands of the west-Mediterranean region of Turkey in order to estimate the broad-sense heritability for plant height, number of stems and pods per plant, seed yield, biological yield, 100-seed weight, days to flowering and maturity. The heritability for plant height, number of stems and pods per plant, seed yield, biological yield, 100-seed weight, days to flowering and maturity were estimated as 83%, 63%, 43%, 62%, 52%, 99%, 97% and 97%, respectively. It was found that seed weight was the least affected trait across changing environmental conditions and followed by days to flowering and maturity. On the other hand, number of pods per plant, biological and seed yields and number of stems per plant were the most affected traits versus environmental conditions.