Inverting character of family GH115 α-glucuronidases

α-Glucuronidases of glycoside hydrolase family 115 of the xylose-fermenting yeast Pichia stipitis and wood-destroying fungus Schizophyllum commune liberate 4-O-methyl-d-glucuronic acid residues from aldouronic acids and glucuronoxylan. The specific activities of both enzymes depended on polymerization degree of the acidic xylooligosaccharides and were inhibited by linear β-1,4-xylooligosaccharides. These results suggest interaction of the enzyme with several xylopyranosyl residues of the xylan main chain. Using ¹H NMR spectroscopy and reduced aldopentaouronic acid (MeGlcA³Xyl₄-ol) as a substrate, it was found that both enzymes are inverting glycoside hydrolases releasing 4-O-methyl-d-glucuronic acid (MeGlcA) as its β-anomer.     

Isolation and structure of d-xylans from pericarp seeds of Opuntia ficus-indica prickly pear fruits

Xylans were isolated from the pericarp of prickly pear seeds of Opuntia ficus-indica (OFI) by alkaline extraction, fractionated by precipitation and purified. Six fractions were obtained and characterized by sugar analysis and NMR spectroscopy. They were assumed to be (4-O-methyl-d-glucurono)-d-xylans, with 4-O-α-d-glucopyranosyluronic acid groups linked at C-2 of a (1→4)-β-d-xylan. The sugar composition and the ¹H and ¹³C NMR spectra showed that their chemical structures were very similar, but with different proportions of d-Xyl and 4-O-Me-d-GlcA. Our results showed that, on average, the water soluble xylans have one nonreducing terminal residue of 4-O-methyl-d-glucuronic acid for every 11 to 14 xylose units, whereas in the water non-soluble xylans, xylose units can varied from 18 to 65 residues for one nonreducing terminal residue of 4-O-methyl-d-glucuronic acid.     

Polysaccharide components of the seed-coat mucilage from hyptis suaveolens

The mucilage isolated from the seed coat of Hyptis suaveolens contains l-fucose, d-xylose, d-mannose, d-galactose, d-glucose and 4-O-methyl-d-glucuronic acid in the mol ratios 1.0:2.5:1.5:7.0:12.5:1.1. Fractionation of the mucilage with Fehling's solution gave a neutral and an acidic polysaccharide. The neutral polysaccharide appears to be homogeneous and is composed of d-mannose, d-galactose and d-glucose in the mol ratios 1.0:4.5:7.5. The acidic polysaccharide is composed of l-fucose, d-xylose and 4-O-methyl-d-glucuronic acid in the mol ratios 1.0:2.5:1.1. It is homogeneous on gel filtration, DEAE-cellulose chromatography, sedimentation analysis and electrophoresis.     

Thermal decomposition of model compounds related to branched 4-O-methylglucuronoxylans

Methyl glycosides of xylo-oligosaccharides (linear and branched) and 4-O-methyl-d-glucuronic acid-containing oligomers closely reflecting the main structural features of native xylans were studied by thermal analysis and pyrolysis—gas chromatography. The number of monomeric residues in the oligosaccharides was found to affect markedly the course of active thermal decomposition. The thermal stability increases with increasing number of monomeric residues, but the ratio of the 2-furaldehyde formed to 3-hydroxy-2-penteno-1,5-lactone remains almost constant, the latter compound being formed from both xylopyranosyl and 4-O-methyl-d-glucuronic acid non-reducing residues in the molecule. A considerable difference in the course of thermal decomposition was observed on comparing reducing sugars to their glycosides, and when an ionic dehydrating catalyst was added to the pyrolyzed sample. The results suggest that the 4-O-methyl-α-d-glucopyranosyluronic acid linkage is the most thermally stable linkage in native (4-O-methylglucurono)xylans, and that the acetyl groups do not significantly accelerate the thermal decomposition of the polysaccharide.     

Quantitative estimation of sugar residues in acidic gums

The neutral and acidic sugar residue compositions of acidic gums from Prunus have been determined by a combination of methods including a simple but effective titrimetric procedure. The molar ratio Of d-glucuronic acid to 4-O-methyl-d-glucuronic acid residues has been determined.     

Structure of l-arabino-d-galactan-containing glycoproteins from radish leaves

Two l-arabino-d-galactan-containing glycoproteins having a potent inhibitory activity against eel anti-H agglutinin were isolated from the hot saline extracts of mature radish leaves and characterized to have a similar monosaccharide composition that consists of l-arabinose, d-galactose, l-fucose, 4-O-methyl-d-glucuronic acid, and d-glucuronic acid residues. The chemical structure features of the carbohydrate components were investigated by carboxyl group reduction, methylation, periodate oxidation, partial acid hydrolysis, and digestion with exo- and endo-glycosidases, which indicated a backbone chain of (1→3)-linked β-d-galactosyl residues, to which side chains consisting of α-(1→6)-linked d-galactosyl residues were attached. The α-l-arabinofuranosyl residues were attached as single nonreducing groups and as O-2- or O-3-linked residues to O-3 of the β-d-galactosyl residues of the side chains. Single α-l-fucopyranosyl end groups were linked to O-2 of the l-arabinofuranosyl residues, and the 4-O-methyl-β-d-glucopyranosyluronic acid end groups were linked to d-galactosyl residues. The O-α-l-fucopyranosyl-(1→2)-α-l-arabinofuranosyl end-groups were shown to be responsible for the serological, H-like activity of the l-arabino-d-galactan glycoproteins. Reductive alkaline degradation of the glycoconjugates showed that a large proportion of the polysaccharide chains is conjugated with the polypeptide backbone through a 3-O-d-galactosylserine linkage.     

Isolation from a softwood xylan of oligosaccharides containing two 4-O-methyl-d-glucuronic acid residues

Partial hydrolysis of a larch arabino(4-O-methylglucurono)xylan afforded two series of oligouronides composed of 4-O-methyl- d-glucuronic acid and d-xylose residues. The first series included aldouronic acids up to the aldopentaouronic acid. Methylation analysis indicated that the aldopentao- and aldotetrao-uronic acids were mixtures of isomers. One aldotetraouronic acid was isolated and identified as O-β-d-Xylp-(1 → 4)-O-β-d-Xylp-(1 → 4)-O-(4-O-Me-α-d-GlcAp)-(1 → 2)-d-Xyl. The two isomeric aldotriouronic acids were separated from each other. The acids of the second series, which were composed of two uronic acids and 2-4 d-xylose residues, were identified as follows: O-β-d-Xylp-(1 → 4)-O-(4-O-Me-α-d-GlcAp)-(1 → 2)-O-β-d-Xylp-(1 → 4)-O(4-O-Me-α-d-GlcAp)-(1 → 2)-O-β-d-Xylp-(1 → 4)-d-Xyl, O-(4-O-Me-α-d-GlcAp)-(1 → 2)-O-β-d-Xylp-(1 → 4)-O-(4-O-Me-α-d-GlcAp)-(1 → 2)-O-β-d-Xylp-(1 → 4)-O-β-d -Xylp-(1 → 4)-D-Xyl, O-(4-O-Me-α-d-GlcAp)-(1 → 2)-O-β-d-Xylp-(1 → 4)-O-(4-O-Mec-α-d-GlcAp)-(1 → 2)-O-β-d-Xylp-(1 → 4)-D-Xyl, and O-(4-O-Me-α-d-GlcAp)-(1 → 2)-O-β-d-Xylp-(1 → 4)-O-(4-O-Me-α-d-GlcAp)-(1 → 2)-D-Xyl. The first three compounds were new acidic oligosaccharides. The 4-O-methyl-d-glucuronic acid in the second series was present in a larger proportion than in the first series, indicating that a large proportion of the uronic acid side-chains were located on two contiguous D-xylose residues in the backbone of the softwood xylan.     

Structural and thermal characterization of hemicelluloses isolated by organic solvents and alkaline solutions from Tamarix austromongolica

Three organosolv and three alkaline hemicellulosic fractions were prepared from lignocellulosic biomass of the fast-growing shrub Tamarix austromongolica (Tamarix Linn.). Sugar analysis revealed that the organosolv-soluble fractions contained a higher content of glucose (33.7-6.5%) and arabinose (14.8-5.6%), and a lower content of xylose (62.2-54.8%) than the hemicellulosic fractions isolated with aqueous alkali solutions. A relatively high concentration of alkali resulted in a decreasing trend of the xylose/4-O-methyl-d-glucuronic acid ratio in the alkali-soluble fractions. The results of NMR analysis supported a major substituted structure based on a linear polymer of β-(1 → 4)-linked d-xylopyranosyl residues, having ramifications of α-l-arabinofuranose and 4-O-methyl-d-glucuronic acid residues monosubstituted at O-3 and O-2, respectively. Thermogravimetric analysis revealed that one step of major mass loss occurred between 200-400 °C, as hemicelluloses devolatilized with total volatile yield of about 55%. It was found that organosolv-soluble fractions are more highly ramified, and showed a higher thermal stability than the alkali-soluble fractions.     

Structural studies of plant gum from sap of the lac tree, Rhus vernicifera

The plant gum isolated from sap of the lac tree, Rhus vernicifera (China), was separated into two fractions having mol. wt. 84,000 and 27,700 by aqueous-phase gel-permeation chromatography. The fractions contain d-galactose (65 mol%), 4-O-methyl-d-glucuronic acid (24 mol%), d-glucuronic acid (3 mol%), l-arabinose (4 mol%), and l-rhamnose (3 mol%). Smith degradation of the carboxyl-reduced polysaccharides gives products of halved molecular weight, and these consist of a β-(1→3)-linked galactopyranan main chain and side chains made up of galactopyranose residues. Peripheral groups, such as α-d-Galp-, α-d-Galp-(1→6)-β-d-Galp-, 4-O-methyl-β-d-GlcpA-, and 4-O-methyl-β-d-GlcpA-(1→6)-β-d-Galp-, are attached to this interior core through β-(1→3)- or β-(1→6)-linkages.     

Studies on a novel polysaccharide gel from the fruit of Thaumatococcus daniellii (Benth)

T. daniellii gel contains residues of L-arabinose, D-xylose, D-glucuronic acid, and 4-O-methyl-D-glucuronic acid in the ratios 1.00:7.20:1.91:0.66, together with nitrogen (1?%) and ash (3.1 %). The ash-free gel contains 76% of pentose and 24% of uronic acid; 25% of the uronic acid occurs as the 4-O-methyl derivative. All of the uronic acid residues in the polysaccharide are susceptible to periodate oxidation. Methylation studies suggest that the uronic acids occur as terminal side-substituents to a xylan back-bone and that the polysaccharide is highly branched. Enzymolysis with β-D-glucuronidase liberates a substantial part of the uronic acid, but does not completely depolymerise the gel.     

Xylans from the tropical grass Panicum maximum

Two xylans have been isolated from the mature tissues of the tropical grass Panicum maximum—an arabino(4-O-methylglucurono)xylan and an acidic galactoarabinoxylan. Both consist of a main chain of β(1 → 4) linked d-xylopyranosyl residues. The former has average of ca 46 such residues to which are attached ca 7 l-arabinofuranosyl and (ca 2 4-O-methyl-d-glucopyranuronosyl residues at C3 and C2 positions respectively. The acidic galactoarabinoxylan has a $\text{DP}$_n of ca 90 and contains arabinose, galactose, xylose and uronic acid residues in the molar ratio 10:5:22:4. Methylation analysis and periodate oxidation indicated the highly branched nature of this polysaccharide.     

Structural data for the carbohydrate of ispaghula husk ex Plantago ovata forsk

The husk from the seeds of Plantago ovata Forsk yielded two fractions when exposed to mild aikali, namely, the mucilage polysaccharide (85%, apparently a single species) and the non-polysaccharide component (15%). Methylation analysis and partial hydrolysis with acid showed the mucilage polysaccharide to be a highly branched, acidic arabinoxylan, the xylan backbone having both (1→4) and (1→3) linkages. The majority of the residues in the xylan backbone are variously substituted at O-2 and O-3 with arabinose, xylose, and an aldobiouronic acid identified as 2-O-(galactopyranosyluronic acid)-rhamnose. A structure incorporating these features for the husk polysaccharide is proposed.     

Mutations of Arabidopsis TBL32 and TBL33 Affect Xylan Acetylation and Secondary Wall Deposition

Xylan is a major acetylated polymer in plant lignocellulosic biomass and it can be mono- and di-acetylated at O-2 and O-3 as well as mono-acetylated at O-3 of xylosyl residues that is substituted with glucuronic acid (GlcA) at O-2. Based on the finding that ESK1, an Arabidopsis thaliana DUF231 protein, specifically mediates xylan 2-O- and 3-O-monoacetylation, we previously proposed that different acetyltransferase activities are required for regiospecific acetyl substitutions of xylan. Here, we demonstrate the functional roles of TBL32 and TBL33, two ESK1 close homologs, in acetyl substitutions of xylan. Simultaneous mutations of TBL32 and TBL33 resulted in a significant reduction in xylan acetyl content and endoxylanase digestion of the mutant xylan released GlcA-substituted xylooligomers without acetyl groups. Structural analysis of xylan revealed that the tbl32 tbl33 mutant had a nearly complete loss of 3-O-acetylated, 2-O-GlcA-substituted xylosyl residues. A reduction in 3-O-monoacetylated and 2,3-di-O-acetylated xylosyl residues was also observed. Simultaneous mutations of TBL32, TBL33 and ESK1 resulted in a severe reduction in xylan acetyl level down to 15% of that of the wild type, and concomitantly, severely collapsed vessels and stunted plant growth. In particular, the S2 layer of secondary walls in xylem vessels of tbl33 esk1 and tbl32 tbl33 esk1 exhibited an altered structure, indicating abnormal assembly of secondary wall polymers. These results demonstrate that TBL32 and TBL33 play an important role in xylan acetylation and normal deposition of secondary walls.     

The structure of lannea coromandelica gum

Lannea coromandelica trees exude a water-soluble gum polysaccharide containing galactose (70%), arabinose (11%), rhamnose (2%), and uronic acids (17%). Three aldobiouronic acids are present (chromatographic analysis), namely 4-O-(α-d-galactopyranosyluronic acid)-d-galactose, 6-O-(β-d-glucopyranosyluronic acid)-d-galactose, and 6-O-(4-O-methyl-d-glucopyranosyluronic acid)-d-galactose. Linkage analysis of degraded gum A, obtained by controlled, acid hydrolysis, gave (chromatographic analysis) 3-O-β-l-arabinofuranosyl-l-arabinose, 3-O-β-l-arabinopyranosyl-l-arabinose, 3-O-α-d-galactopyranosyl-l-arabinose, 3-O-β-d-galactopyranosyl-d-galactose, and 6-O-β-D-galactopyranosyl-d-galactose. Degraded gum A was examined by methylation analysis, and was subjected to a Smith-degradation, giving degraded gum B, which was studied by linkage and methylation analysis. The O-methyl derivative of the whole gum was prepared by the Haworth and Purdie procedures and examined, after methanolysis, by g.l.c.: 2,3,4-tri-O-methyl-l-rhamnose, 2,3,5- and 2,3,4-tri- and 2,5-di-O-methyl-l-arabinose; 2,3,4,6-tetra-, 2,3,6-, 2,4,6-, and 2,3,4-tri-, and 2,6- and 2,4-di-O-methyl-d-galactose; 2,3,4-tri-O-methyl-d-glucuronic acid and 2,3,4-tri-O-methyl-d-galacturonic acid were identified. The whole gum was subjected to three successive Smith-degradations, giving Polysaccharides I–III which were examined by linkage and methylation analysis. The structural evidence obtained indicates that the gum molecules are very highly branched, based on a galactan framework consisting of short chains of β-(1→3)-linked d-galactose residues, branched and interspersed with β-(1→6) linkages. To positions 3 and 6 of this framework are attached either single d-galactose end-groups or short side-chains of d-galactose or of l-arabinose residues, and three aldobiouronic acids. The structure therefore appears to be very similar to that established recently for Lannea humilis gum.     

Rapeseed hull pectin

A pectin isolated from rapeseed, hulls by extraction with aqueous ammonium oxalate, had a degree of esterification of 83% and contained residues of hexuronic (mainly D-galacturonic) acid (76%), D-galactose (2–3%), L-arabinose (8–9%), D-xylose (2%), L-rhamnose (2–3%), and L-fucose (1%). Partial acid hydrolysis of the derived pectic acid furnished 2-O-(α-D-galactopyranosyluronic acid)-L-rhamnose, 4-O-(α-D-galactopyranosyluronic acid)-D-galacturonic acid and the polymer-homologous tri- and tetrasaccharides, and 4-O-(glucopyranosyluronic acid)-L-fucose. The cleavage products from the methylated pectin were examined by g.l.c. and the partially methylated alditol acetates from the methylated carboxyl-reduced polysaccharide by g.l.c.-mass spectrometry. Parallel methylation studies on lemon-peel pectin have established a close similarity between the two pectins.     

Characterization of structurally similar neutral and acidic tetrasaccharides obtained from the enzymic hydrolyzate of a 4-O-methyl-D-glucurono-D-xylan

Two similar tetrasaccharides, one neutral and one acidic, were isolated from the products released by the attack of a xylanase on the in situ reduced 4-O-methyl-D-glucurono-D-xylan from aspen (Populus tremuloides). Paper chromatography, gel filtration behavior, methylation followed by reduction, and mass spectrometry showed that the oligosaccharides were O-(4-O-methyl-α-D-glucopyranosyluronic acid)-(1→2)-D-xylotriose and-O-(4-O-methyl-α-D-glucopyranosyluronic acid)-(1→2)-D-xylotriose. Independent of the acidic or neutral substituent on the present xylan chain, the enzymic cleavage led preferentially to oligosaccharides substituted at the nonreducing end. The existence, in wood, of a few uronic acid substituents of the D-xylan in the esterified form was confirmed, and their linkage to lignin postulated.     

Methylation analysis of carrageenans from the seaweed Iridaea undulosa

Two carrageenans from Iridaea undulosa, isolated by precipitation of the crude polysaccharide at O.70–1.05 M and 1.55–1.65 M KCl concentrations, were studied by methylation analysis. Acid hydrolysis of the methylated derivative of the less soluble carrageenan (molar ratio galactose: 3,6-anhydrogalactose: sulphate 1.00: 0.50: 1.20) yielded major amounts of 2,6-di-O-methylgalactose (51.3 mol %), 4,6-di-O-methylgalactose (25.6%) and 4-O-methylgalactose (51.3mol%), 4,6-di-O-methylgalactose (25.6%) and 4-O-methylgalactose (13.4%). Minor quantities of 3-O-methylgalactose (4.6%) and 6-O-methylgalactose (3.2%) were found together with traces of 2,3,6- and/or 2,4,6-tri-O-methylgalactose, 2-O-methylgalactose and galactose. Oxidative acid hydrolysis produced 3,6-anhydro-2-O-methylgalactonic acid and 3,6-anhydrogalactonic acid in a molar ratio 3.5-4.0:1.0. The methylated derivative of the more soluble carrageenan (molar ratio galactose:3,6-anhydrogalactose:sulphate 1.00:0.04:1.43) gave on acid hydrolysis, 2,3,4,6-tetra-O-methylgalactose (4.6%), 2,3,6-tri-O-methylgalactose (4.2%), 2,4,6-tri-O-methylgalactose (10.7%), 4,6-di-O-methylgalactose (24.1%), 3,6-di-0-methylgalactose (8.0%), 2,3-di-O- methylgalactose (3.4%), 2,4-di-O-methylgalactose (4.6%), 2,6-di-O-methylgalactose (4.2%), 3-O-methylgalactose (19.5%),4-O-methylgalactose (9.6%),6-O-methylgalactose(3.1%),galactose (3.4%)and traces of 2-O-methylgalactose.     

An arabinogalacto(4-O-methylglucurono)xylan from the leaves of Hordeum vulgare

An arabinogalacto(4-O-methylglucurono)xylan with a $\text{DP}$_n of ca. 96 has been isolated from the leaves of barley. Based on structural studies it is proposed that the hemicellulose consists of a main chain of β (1→4)-linked d-xylopyranosyl residues to which are attached an average of 8·1 l-arabinofuranosyl residues, 3·8 galactopyranosyl-(1→4)-d-xylopyranosyl-(1→2)-l-arabinofuranosyl residues and 4·4 4-O-methyl-d-glucopyranuronosyl residues.     

Isolation of two pure polysaccharides from the hemicellulose of slash pine (Pinus elliottii)

Two pure, acidic polysaccharides have been isolated from the hemicellulose of slash pine in yields of 1–2% and 4–5%. Their properties are compared, and the structure of one of them has been investigated by methylation analysis. The results indicate that the glycan is a β-D-(1→4)-linked xylan chain with many branch points. 4-O-Methyl-D-glucopyranosyluronic acid, L-arabinofuranose, and D-xylopyranose residues occur as non-reducing end groups. The uronic acid occurs as single-unit attachments to the main chain. Some of the D-xylose residues in the polysaccharide are doubly branched. The total hemicellulose components of the wood probably represent a complex mixture of chemical types, from which the two pure fractions described above may be separated fortuitously by careful, fractional precipitation.     

Structural studies of sapote (Sapota achras) gum

Sapote gum contains residues of L-arabinose (pyranose and furanose), D-xylose, D-glucuronic acid, and 4-O-methyl-D-glucuronic acid in the ratio 1.0:2.8:0.48:0.52. The two uronic acids were conveniently determined by reducing the carboxyl functions with lithium borohydride and measuring the ratio of D-glucose to 4-O-methyl-D-glucose. Periodate oxidation of the carboxyl-reduced gum gave inter alia 2-O-methyl-D-erythritol and 4-O-methyl-D-glucose in amounts suggesting that 37% of the 4-O-methyl-D-glucuronic acid residues are unsubstituted in the polysaccharide. Acetolysis of the carboxyl-reduced gum gave O-α-D-glucopyranosyl-(1→2)-(4-O-β-D-xylopyranosyl)_0,1,2,-D-xylose, a hitherto undescribed series of oligosaccharides, together with 2-O-(4-O-methyl-α-D-glucopyranosyl)-D-xylose. Methylation confirmed that sapote gum has a highly branched structure, and commercial xylanases did not depolymerize the gum. An α-L-arabinofuranosidase liberated a substantial part of the arabinose residues. Sapote gum is a member of the uncommon class of plant gums having a D-xylose backbone and structurally resembles brea gum.