Ovule and gametophyte development in Nicotiana glauca Graham (Solanaceae)

Abstract

The development of ovule and megagametophyte is examined in Nicotiana glauca, using light microscopy. The ovules proved unitegmic, tenuinucellate and endothelial as in all the Solanaceae so far studied. The ovule primordia are of the three-zonate type. The integument, which is of dermal origin, is at first two-layered but later produces additional intermediate cells whose origin is not constant. The nucellus, whose initial curvature bears no relation to the origin of the integument, has, like other Solanaceae, a one or two-celled archesporium from which a single meiocyte develops. The gametophyte is confirmed to be bisporic in origin and its development follows the Allium type. Furthermore, the hypostase, which is rare in the family, is observed below the antipodal cells.     

Notes on the ontogeny and structure of the seed-coat of Sclerocarya birrea (Richard) Hochst. subsp. caffra (Sonder) Kokwaro (Anacardiaceae)

The pendulous, bitegmic, anatropous ovulr with dorsal raphe is suspended at the tip of a massive funicle. A group of nurellar cells with intensively staining cell walls, the hypostase sensu stricto , is present. The initially plate-like tanniniferous chalazal-nucellar tissue, with suberin and lignin impregnated cell walls represents a hypostase sensu lato . The mature seed-coat is formed by the raphe, extensive chalaza, adjacent, well-developed, cup-like hypostase sensu lato , remnants of the two integuments and a cuticular layer. The exalbuminous seed of Sclerocarya birrea suhsp. caffra (the Marula), is regarded to he a derived and phylogenetically advanced type. The undifferentiated seed-roat is very similar to that found in Lannea discolor which, like the marula, belongs to the tribe Spondieae. The similarities in the structure of the seed-coat and seed of the marula and L. discolor confirm their proposed close phylogenetir relationship.     

Nuclear DNA content of monocotyledons and related taxa

Nuclear DNA content of 62 species of angiosperms including 52 monocotyledons and ten dicotyledons has been estimated by flow cytometry using Nicotiana tabacum var. Xanthi as the internal standard. These data, considered together with previous data on diploid species, suggest the following: 1) Most families and orders of monocotyledons have small genomes. Contrary to the general impression that monocotyledons are a group characterized by large genomes, genomes of over 20 pg/2C nucleus occur only in the Liliiflorae, Commelinales, Alismatales, and Araceae. 2) Variation within families ranges from two- to 56-fold, but is two- to fivefold in most families. Thus extraordinary variation in genome size appears to be limited to particular lineages, perhaps owing to some shared feature that facilitates such variation. 3) Endopolyploidy is not observed in the leaves of the species studied, although it has been reported to occur in the roots of several monocotyledons. This suggests that an examination of the basis for this difference between the roots and leaves of monocotyledons may provide clues to the mechanisms that regulate endopolyploidization in these organs.     

Embryology and taxonomical position of Retzia capensis (Retziaceae)

The ovules of Retzia capensis are anatropous, unitegmic and tenuinucellate. A well-developed hypostase of concentric layers of cells is present. Embryo sac formation follows Polygonum type. The central part of the mature embryo sac contains rich amounts of starch grains, which disappear at the beginning of the endosperm development. The endosperm formation results in a chalazal haustorium of a great number of long, narrow, densely plasmatic cells, a micropylar haustorium of loosely plasmatic cells, and a middle region which in the beginning is only partly cellular, but later the whole endosperm consists of long, narrow cells. The hypostase prevents the chalazal endosperm haustorium from penetrating to the lower part of the ovule, while the micropylar haustorium is able to grow upwards into the long micropyle. The cellular endosperm formation, the formation of endosperm haustoria, of which the micropylar is most distinctive, and formation of a well-developed hypostase all indicate a close relationship to Buddleiaceae and part of Scrophulariaceae. Therefore, both Retziaceae and Buddleiaceae should be placed in the order Scrophulariales.     

Trends in the evolution of dicotyledonous seeds based on character associations, with special reference to pachychalazy and recalcitrance

VON TEICHMAN, I. & VAN WYK, A. E., 1991. Trends in the evolution of dicotyledonous seeds based on character associations, with special reference to pachychalazy and recalcitrance. The possible evolutionary status of the endothelium, hypostase, pachychalaza and the recalcitrant viability behaviour of seeds is considered in relation to bitegmy/unitegmy, crassinucellate/tenuinucellate ovules, nuclear/cellular endosperm development, large/small seed size, woody/herbaceous habit and tropical/temperate habitat. The presence of the endothelium, hypostase, pachychalaza and recalcitrance in dicotyledonous families is plotted against Dahlgren's system of classification. Results are compared with Sporne's advancement index for the various families. An endothelium is considered derived since it occurs more often in highly evolved superorders and is significantly associated with derived ovule and endosperm character states as well as with smaller seed size. A hypostase appears to be relatively ancestral and is significantly associated with pachychalazy and recalcitrance. The endothelium and hypostase have developed independently in many taxa and could be interpreted as being structurally and functionally analogous. Pachychalazy and recalcitrance are significantly associated with ancestral ovule character states and, at the species level, with large seed size (overgrown seed), woody habit and tropical habitat. The presence of pachychalazy, recalcitrance and associated large seed size are therefore regarded as ancestral character states of the dicotyledons. Consideration of currently accepted dicta on seed character state polarity, suggests a reversal in the evolutionary status of pachychalazy and large seed size.     

Diversity in organization and the origin of gene orders in the mitochondrial DNA molecules of the genus Saccharomyces

Sequencing of the Saccharomyces cerevisiae nuclear and mitochondrial genomes provided a new background for studies on the evolution of the genomes. In this study, mitochondrial genomes of a number of Saccharomyces yeasts were mapped by restriction enzyme analysis, the orders of the genes were determined, and two of the genes were sequenced. The genome organization, i.e., the size, presence of intergenic sequences, and gene order, as well as polymorphism within the coding regions, indicate that Saccharomyces mtDNA molecules are dynamic structures and have undergone numerous changes during their evolution. Since the separation and sexual isolation of different yeast lineages, the coding parts have been accumulating point mutations, presumably in a linear manner with the passage of time. However, the accumulation of other changes may not have been a simple function of time. Larger mtDNA molecules belonging to Saccharomyces sensu stricto yeasts have acquired extensive intergenic sequences, including guanosine-cytosine-rich clusters, and apparently have rearranged the gene order at higher rates than smaller mtDNAs belonging to the Saccharomyces sensu lato yeasts. While within the sensu stricto group transposition has been a predominant mechanism for the creation of novel gene orders, the sensu lato yeasts could have used both transposition- and inversion-based mechanisms.     

Molecular Evidence for Multiple Origins of the European Spined Loaches (Teleostei,Cobitidae)

We present a phylogenetic investigation of the Northern Clade, the major monophyletic clade within the freshwater fish family Cobitidae, one of the most prominent families of freshwater fishes found in Asian and European waters. Phylogenetic reconstructions based on the cytochrome b and RAG-1 genes show the genera Microcobitis, Sabanejewia, Koreocobitis and Kichulchoia as monophyletic groups. These reconstructions also show a Cobitis sensu lato and a Misgurnus sensu lato group. The Cobitis sensu lato group includes all species of Cobitis, Iksookimia, Niwaella and Kichulchoia, while the Misgurnus sensu lato group includes Misgurnus, Paramisgurnus and Koreocobitis. Although the monophyly of both the Cobitis sensu lato and Misgurnus sensu lato groups is supported, relationships within the groups are incongruent with current generic definitions. The absence of monophyly of most genera included in the Cobitis sensu lato group (Cobitis, Iksookimia and Niwaella) or their low genetic differentiation (Kichuchoia) supports their consideration as synonyms of Cobitis. Molecular phylogenies indicate that the Asian species of Misgurnus experienced a mitochondrial introgression from a lineage of Cobitis. We also find two nuclear haplotypes in the same Cobitis species from the Adriatic area that, in the absence of morphological differentiation, may indicate molecular introgression. Most lineages within the Northern Clade consist of species found in East Asia. However, some lineages also contain species from Europe and Asia Minor. The phylogenetic relationships presented here are consistent with previous studies suggesting an East Asian origin of the Northern Clade. According to the current distributions and phylogenetic relationships of the Misgurnus sensu lato and Cobitis clade lineages, particularly of M. fossilis and C. melanoleuca, the range expansion of East Asian species into Europe was most likely via Siberia into Northern and Central Europe. Phylogenetic analyses also show that the Cobitis sensu lato group consists of two clear subgroups (I and II), each presenting geographical differences. Subgroup I is distributed exclusively in East Asian drainages with an Eastern European offshoot (C. melanoleuca), whereas Subgroup II includes species widespread throughout Europe (including the Mediterranean), Asia Minor, the Black Sea and the Caucasus, with some lineages related to species restricted to East Asia.     

Intra- and Intergenomic variation of Ploidy and Clonality characterize <Emphasis Type="Italic">Phytophthora capsici</Emphasis> on <Emphasis Type="Italic">Capsicum</Emphasis> sp. in Taiwan

Phytophthora capsici is a devastating disease of pepper (Capsicum sp.) in Taiwan causing complete loss of commercial fields. The objective of this study was to characterize genetic diversity for 38 newly collected isolates and three historical isolates. Analysis of data includes whole genome sequence for two new isolates and for two isolates collected previously in 1987 and 1995. In addition, 63 single nucleotide polymorphism loci were genotyped using targeted-sequencing, revealing 27 unique genotypes. Genotypes fell into three genetic groups: two of the groups contain 90% (n = 33) of the 2016 isolates, are triploid (or higher), are exclusively the A2 mating type and appear to be two distinct clonal lineages. The isolates from 2016 that grouped with the historical isolates are diploid and the A1 mating type. Whole genome sequence revealed that ploidy varies by linkage group, and it appears the A2 clonal lineages may have switched mating type due to increased ploidy. Most of the isolates were recently race-typed on a set of differential C. annuum, and although there was no direct correlation between virulence and ploidy, many of the triploid isolates were less virulent as compared to the historical diploid isolates. The implications for breeding resistant pepper and conducting population analyses are discussed.     

Ovule,fruit and seed development in Abolboda (Xyridaceae,Poales): implications for taxonomy and phylogeny

Xyridaceae belongs to the xyrid clade of Poales, but the phylogenetic position of the xyrid families is only weakly supported. Xyridaceae is divided into two subfamilies and five genera, the relationships of which remain unclear. The development of the ovule, fruit and seed of Abolboda spp. was studied to identify characteristics of taxonomic and phylogenetic value. All of the studied species share anatropous, tenuinucellate and bitegmic ovules with a micropyle formed by the inner and outer integuments, megagametophyte development of the Polygonum type, seeds with a tanniferous hypostase, a helobial and starchy endosperm and an undifferentiated embryo, seed coat derived from both integuments with a tanniferous tegmen and a micropylar operculum, and fruits with a parenchymatous endocarp and mesocarp and a sclerenchymatous exocarp. Most of the ovule and seed characteristics described for Abolboda are also present in Xyris and may represent a pattern for the family. Abolboda is distinguished by the ovule type, endosperm formation and the number of layers in the seed coat, in agreement with its classification in Abolbodoideae. The following characteristics link Xyridaceae to Eriocaulaceae and Mayacaceae, supporting the xyrid clade: tenuinucellate, bitegmic ovules; seeds with a tanniferous hypostase, a starchy endosperm and an undifferentiated embryo; and a seed coat with a tanniferous tegmen. A micropylar operculum in the seeds of Abolboda is described for the first time here and may represent a synapomorphy for the xyrids. © 2014 The Linnean Society of London, Botanical Journal of the Linnean Society, 2014, 175 , 144–154.     

Development and structure of the seed-coat of Lannea discolor (Sonder) Engl. (Anacardiaceae)

VON TEICHMAN, I., 1988. The development and structure of the seed-coat of Lannea discolor (Sonder) Engl. (Anacardiaceae). The bitegmic, anatropous ovule contains a group of nucellar cells with slightly thickened and intensively staining cell walls. Besides this hypostase sensu stricto, the nucellus cells in the chalaza become tanniniferous. This tanniniferous chalazal-nucellar tissue is intially plate-like. It is referred to as the hypostase sensu lato. The latter and the chalaza enlarge significantly. The raphe, extensive chalaza and well-developed cup-like hypostase sensu lato play an important role in the development of the seed-coat. The inner, tanniniferous epidermis of the inner integument persists in parts of the mature seed-coat. The outer, distinctly tanniniferous epidermis of the outer integument shows in the mature seed-coat a degree of secondary wall thickening. This undifferentiated type of seed-coat of L. discolor (tribe Spondieae) is remarkably similar to that of Camnosperma minor (tribe Rhoideae), both also showing tendency towards the exotestal type. In the Rhoideae the endotestal, i.e. differentiated type, of seed-coat is also present. The exalbuminous seed of L. discolor represents a derived and advanced type.     

Development and structure of the seed of Ozoroa paniculosa (Anacardiaceae) and taxonomic notes

The anatropous, bitegmic and crassinucellar ovule has a nuclear endosperm development. It is further characterized by a hypostase sensu lato. This hypostase being an integral part of the chalaza undergoes a secondary extension with it. At maturity the exalbuminous seed is partially pachychalazal and therefore two anatomically distinct larger parts can be distinguished in the mature seed coat. An endotegmen typifies the integumentary seed coat, while a saddle-shaped hypostase characterizes the chalazal seed coat. This seed coat shows several characteristics of the typical anacardiaceous pachychalazal seed. The cotyledons store lipids and protein as nutrient reserveS. A well-developed cuticle, cuticular layer, cutin and callose in the hypostase cell walls, as well as tannin-like deposits in the seed coat, protect the physiologically ripe seed against dehydration.     

Morphological characterization and molecular phylogeny of Portunoidea Rafinesque, 1815 (Crustacea Brachyura): Implications for understanding evolution of swimming capacity and revision of the family-level classification

Cheliped construction, in particular the teeth pattern on chelae fingers is considered as most important character suit (along with burrowing/swimming apparatus) for the diagnosis of Portunoidea. Heterochelic and heterodontic chelipeds with the molariform tooth in the larger chela and multi-lobed serial teeth are presumably ancestral and most common pattern for the group. New material (mostly species of Thalamitinae Paulson, 1875, Lupocyclus Adamd and White, 1848 and Portunus Weber, 1795 sensu lato) have been combined with the existing sequences from the GenBank to produce molecular phylogenetic reconstructions based on the histone H3 gene fragment and a multi-gene tree (for smaller set of species) based on partial sequences of H3, D1 region of 28S gene and mitochondrial COI gene. These reconstructions have not provided necessary support to the monophyly of Portunoidea sensu lato but indicated the presence of several monophyletic lineages, i.e. Portunidae sensu stricto, Polybiidae + Thiidae + Carcinidae + Pirimelidae, Benthochascon + Geryonidae (to lesser extent), and Ovalipes. Monophyly of the Portunidae sensu stricto is supported by both the H3 and multigene trees and morphological evidence. Swimming capacity probably evolves as a result of parallel evolution in at least three different lineages of portunoids. A new version of the family level classification of Portunoidea and a key to their families are provided with the following taxa: Geryonidae (Geryoninae + Benthochasconinae subfam. nov.), Ovalipidae fam. nov., Brusiniidae Štev?i?, 1991, Thiidae, Pirimelidae, Carcinidae McLeay, 1838 (Carcininae + Portumninae Ortmann, 1893), Polybiidae Ortmann, 1893, and Portunidae Rafinesque, 1815 sensu stricto. The most radical change in the systematics of Portunidae sensu stricto is the final recognition of the polyphyly of Portunus sensu lato and the need for revalidization and re-diagnozing of several taxa that were synonymized by Stephenson and Campbell (1959) and Stephenson (1972) under Portunus. While some subfamilies of the Portunidae (Podophthalminae Dana, 1851, Thalamitinae, and Lupocyclinae Alcock, 1895) are well supported by molecular phylogenies and the presence of morphological synapomorphies, the others need re-assessment.     

山茶科核果茶属和石笔木属的胚胎学研究

观察了短叶核果茶,石笔木,粗毛石笔木和屏石笔木的大小孢子和雌雄配子体的发生和发育过程,４个种的胚胎学特征高度相似,均为基本型药壁发育,腺质线毡层,同时型小孢子母细胞胞质分裂,四面体形小孢子四分体,二细胞成熟花粉,倒生胚珠,双珠被,薄珠心,单孢原,蓼胚囊,卵细胞与助细胞区分明显,均具有珠被绒毡层和承珠盘,以蓼型胚囊区别于邻近的山茶属。     

Investigation of the Presence of Phenolic Compounds in Monocotyledonous Cell Walls, using UV Fluorescence Microscopy

Harris and Hartley (1976, 1980) demonstrated the presence offerulic acid in cell walls of certain monocotyledons using UVfluorescence microscopy (fluorescing green after treatment withammonium hydroxide solution). The presence or absence of thistype of fluorescence is apparently critical in higher levelsystematics of monocotyledons. In order to evaluate the significanceof this character, cell wall fluorescence was investigated ina range of monocotyledon species, particularly the AustralianXanthorrhoeaceae sensu lato (Bedford et al., 1986), which werenot investigated in earlier studies. This family is widely regardedas polyphyletic and was divided into several families by Dahlgren,Clifford and Yeo (1985). Some of its constituent genera, suchas Dasypogon, Kingia and Calectasia, have been linked with bothcommelinoid and non-commelinoid monocotyledons, and are of obscureaffinity. Some genera of Xanthorrhoeaceae sensu lato (Baxteria,Calectasia, Dasypogon and Kingia) show this type of green cellwall fluorescence and may therefore be more closely linked withthe commelinoid monocotyledons, rather than the Lilianae-Asparagales,as previously placed (Dahlgren et al., 1985).Copyright 1994,1999 Academic Press Asparagales, Dasypogonaceae, fluorescence, Hanguana, monocotyledons, systematics, Xanthorrhoeaceae     

The generic delimitation of Rhodella (Porphyridiales,Rhodophyta) with emphasis on ultrastructure and molecular phylogeny

We investigated the cellular features and molecular phylogeny of Rhodella species and related unicellular red algae including undescribed species that we isolated. Results provide a new taxonomic interpretation at both generic and specific levels. The genus Rhodella is defined by its pyrenoid that is free from any internal structures. Based on phylogenetic analysis using 18SrDNA, there are two possibilities for the generic delimitation of Rhodella: Rhodella sensu stricto and Rhodella sensu lato. The generic autonomy of Dixoniella and the taxonomic position of R. cyanea were also discussed.     

Plasmidome Interchange between Clostridium botulinum,Clostridium novyi and Clostridium haemolyticum Converts Strains of Independent Lineages into Distinctly Different Pathogens

Clostridium botulinum (group III), Clostridium novyi and Clostridium haemolyticum are well-known pathogens causing animal botulism, gas gangrene/black disease, and bacillary hemoglobinuria, respectively. A close genetic relationship exists between the species, which has resulted in the collective term C. novyi sensu lato. The pathogenic traits in these species, e.g., the botulinum neurotoxin and the novyi alpha toxin, are mainly linked to a large plasmidome consisting of plasmids and circular prophages. The plasmidome of C. novyi sensu lato has so far been poorly characterized. In this study we explored the genomic relationship of a wide range of strains of C. novyi sensu lato with a special focus on the dynamics of the plasmidome. Twenty-four genomes were sequenced from strains selected to represent as much as possible the genetic diversity in C. novyi sensu lato. Sixty-one plasmids were identified in these genomes and 28 of them were completed. The genomic comparisons revealed four separate lineages, which did not strictly correlate with the species designations. The plasmids were categorized into 13 different plasmid groups on the basis of their similarity and conservation of plasmid replication or partitioning genes. The plasmid groups, lineages and species were to a large extent entwined because plasmids and toxin genes had moved across the lineage boundaries. This dynamic process appears to be primarily driven by phages. We here present a comprehensive characterization of the complex species group C. novyi sensu lato, explaining the intermixed genetic properties. This study also provides examples how the reorganization of the botulinum toxin and the novyi alpha toxin genes within the plasmidome has affected the pathogenesis of the strains.     

藏药椭圆叶花锚的胚胎学

本文首次报道了藏药椭圆叶花锚的胚胎学特征。花药四室,药壁发育为双子叶型;绒毡层异型起源,腺质型绒毡层。小孢子母细胞减数分裂为同时型,四分体的排列方式为四面体型;成熟花粉为３－细胞。子房２心皮,而二心皮连接处强烈膨大、内凸,４列胚珠。薄珠心,单珠被,直生胚珠。胚囊发育为蓼型。胚乳发育为核型。胚胎发育为茄型酸浆Ｉ变型。反足细胞在胚囊成熟时期宿存。承珠盘发达。果实成熟时,种子只发育至球型胚阶段。比较了该种与龙胆族其它属、种的胚胎学特征,发现它们大部分特征是相似的,但在如下３个特征上存在区别：子房二心皮连接处强烈膨大、内凸;直生胚珠;具有发达的承珠盘。其胚胎学特征的系统学和分类学意义有待进一步比较与评价     

Systematic vegetative anatomy and ensiform leaf development in Xyris (Xyridaceae)

Ensiform leaf development in monocotyledons follows a broadly similar sequence in a wide range of relatively unrelated taxa, indicating a plastic developmental pattern, possibly associated with stressed environmental conditions, since Xyris species tend to grow in relatively damp but nutrient-poor environments. The bifacial leaf sheath surrounds the apex and the subadjacent primordium. A conical unifacial leaf tip 'Vorläuferspitze' is established at an early stage, followed by extension growth in the region behind it, generating a unifacial ensiform blade. Root and rhizome structure are also described in a systematic context, particularly in comparison with related taxa in Xyridaceae and other commelinoid monocotyledons, although information on these structures is relatively sparse.     

The Complete Sequence of the Mitochondrial Genome of Butomus umbellatus – A Member of an Early Branching Lineage of Monocotyledons

In order to study the evolution of mitochondrial genomes in the early branching lineages of the monocotyledons, i.e., the Acorales and Alismatales, we are sequencing complete genomes from a suite of key taxa. As a starting point the present paper describes the mitochondrial genome of Butomus umbellatus (Butomaceae) based on next-generation sequencing data. The genome was assembled into a circular molecule, 450,826 bp in length. Coding sequences cover only 8.2% of the genome and include 28 protein coding genes, four rRNA genes, and 12 tRNA genes. Some of the tRNA genes and a 16S rRNA gene are transferred from the plastid genome. However, the total amount of recognized plastid sequences in the mitochondrial genome is only 1.5% and the amount of DNA transferred from the nucleus is also low. RNA editing is abundant and a total of 557 edited sites are predicted in the protein coding genes. Compared to the 40 angiosperm mitochondrial genomes sequenced to date, the GC content of the Butomus genome is uniquely high (49.1%). The overall similarity between the mitochondrial genomes of Butomus and Spirodela (Araceae), the closest relative yet sequenced, is low (less than 20%), and the two genomes differ in size by a factor 2. Gene order is also largely unconserved. However, based on its phylogenetic position within the core alismatids Butomus will serve as a good reference point for subsequent studies in the early branching lineages of the monocotyledons.     

Calcium Oxalate Crystals in Monocotyledons: A Review of their Structure and Systematics

Three main types of calcium oxalate crystal occur in monocotyledons:raphides, styloids and druses, although intermediates are sometimesrecorded. The presence or absence of the different crystal typesmay represent ‘useful’ taxonomic characters. Forinstance, styloids are characteristic of some families of Asparagales,notably Iridaceae, where raphides are entirely absent. The presenceof styloids is therefore a synapomorphy for some families (e.g.Iridaceae) or groups of families (e.g. Philydraceae, Pontederiaceaeand Haemodoraceae). This paper reviews and presents new dataon the occurrence of these crystal types, with respect to currentsystematic investigations on the monocotyledons. Copyright 1999Annals of Botany Company Calcium oxalate, crystals, raphides, styloids, druses, monocotyledons, systematics, development.