Severe plant invasions can increase mycorrhizal fungal abundance and diversity

Invasions by non-native plants can alter ecosystem functions and reduce native plant diversity, but relatively little is known about their effect on belowground microbial communities. We show that invasions by knapweed (Centaurea stoebe) and leafy spurge (Euphorbia esula, hereafter spurge)—but not cheatgrass (Bromus tectorum)—support a higher abundance and diversity of symbiotic arbuscular mycorrhizal fungi (AMF) than multi-species native plant communities. The higher AMF richness associated with knapweed and spurge is unlikely due to a co-invasion by AMF, because a separate sampling showed that individual native forbs hosted a similar AMF abundance and richness as exotic forbs. Native grasses associated with fewer AMF taxa, which could explain the reduced AMF richness in native, grass-dominated communities. The three invasive plant species harbored distinct AMF communities, and analyses of co-occurring native and invasive plants indicate that differences were partly driven by the invasive plants and were not the result of pre-invasion conditions. Our results suggest that invasions by mycotrophic plants that replace poorer hosts can increase AMF abundance and richness. The high AMF richness in monodominant plant invasions also indicates that the proposed positive relationship between above and belowground diversity is not always strong. Finally, the disparate responses among exotic plants and consistent results between grasses and forbs suggest that AMF respond more to plant functional group than plant provenance.     

Systematic variation in the logarithmic ranges in abundance of freshwater phytoplankton populations

相似文献   

Isometric size-scaling of metabolic rate and the size abundance distribution of phytoplankton

The relationship between phytoplankton cell size and abundance has long been known to follow regular, predictable patterns in near steady-state ecosystems, but its origin has remained elusive. To explore the linkage between the size-scaling of metabolic rate and the size abundance distribution of natural phytoplankton communities, we determined simultaneously phytoplankton carbon fixation rates and cell abundance across a cell volume range of over six orders of magnitude in tropical and subtropical waters of the Atlantic Ocean. We found an approximately isometric relationship between carbon fixation rate and cell size (mean slope value: 1.16; range: 1.03-1.32), negating the idea that Kleiber's law is applicable to unicellular autotrophic protists. On the basis of the scaling of individual resource use with cell size, we predicted a reciprocal relationship between the size-scalings of phytoplankton metabolic rate and abundance. This prediction was confirmed by the observed slopes of the relationship between phytoplankton abundance and cell size, which have a mean value of -1.15 (range: -1.29 to -0.97), indicating that the size abundance distribution largely results from the size-scaling of metabolic rate. Our results imply that the total energy processed by carbon fixation is constant along the phytoplankton size spectrum in near steady-state marine ecosystems.     

Relative impacts of Daphnia grazing and direct stimulation by fish on phytoplankton abundance in mesocosm communities

• 1 Planktivorous fish were hypothesised to influence the abundance of algal biomass in lakes by changing zooplankton grazing, affecting zooplankton nutrient recycling and by direct recycling of nutrients to phytoplankton. The relative roles of direct fish effects vs. zooplankton grazing were tested in mesocosm experiments by adding to natural communities large grazing zooplankton (Daphnia carinata) and small planktivorous fish (mosquitofish or juveniles of Australian golden perch).
• 2 The addition of Daphnia to natural communities reduced the numbers of all phytoplankton less than 30 µm in size, but did not affect total biomass of phytoplankton as large Volvox colonies predominated.
• 3 The addition of Daphnia also reduced the abundance of some small (Moina, Bosmina, Keratella) and large (adult Boeckella) zooplankton, suggesting competitive interactions within zooplankton.
• 4 The addition of mosquitofish to communities containing Daphnia further reduced the abundance of some small zooplankton (Moina, Keratella), but increased the numbers of Daphnia and adult Boeckella. In spite of the likely increase in grazing due to Daphnia, the abundance of total phytoplankton and dominant alga Volvox did not decline in the presence of mosquitofish but was maintained at a significantly higher level than in control.
• 5 The addition of juveniles of golden perch to communities containing Daphnia reduced the abundance of small zooplankton (Moina), increased the abundance of large zooplankton (adult Boeckella) but had no significant effect on Daphnia and total phytoplankton abundance.
• 6 The results of the present study suggest that some planktivorous fish can promote the growth of phytoplankton in a direct way, probably by recycling nutrients, and even in the presence of large grazers. However, the manifestation of the direct effect of fish can vary with fish species.

     

Effects of pH,phosphate and ammonia on the rate of uptake of nitrate and ammonia by freshwater phytoplankton

The effect of phosphate (PO₄ ⁺³) and pH in regulating nitrate (NO₃) and ammonia (NH₃ ⁺) uptake by phytoplankton was investigated in two Oklahoma lakes using ¹⁵N tracers. Addition of PO₄ ⁺³ above ambient concentrations had a negligible effect on the rate of uptake of NO₃ ^– or NH₃ ⁺. Manipulation of pH of lake water had little effect on uptake of either NO₃ ^– or NH₃ ⁺. A correlation analysis suggested that NO₃ ^– is not used by phytoplankton when NH₃ ⁺ concentrations exceed about 210 µg NH₃ ⁺-N(1)^–1.     

Flow cytometry sorting of freshwater phytoplankton

We used the flow sorting capacities of a benchtop FACSCalibur flow cytometer to analyze the phytoplankton community of four different aquatic ecosystems. We show that despite the high optical, mechanistic, and hydrodynamic stress for the cells while sorted, most of the targeted populations could be isolated and grew in mixed culture media subsequent to sorting. Forty-five phytoplankton taxa were isolated, including green algae (29 species), cyanobacteria (eight), diatoms (seven), and cryptomonads (one). The isolation success average was high since 80% of the total sorted populations grew successfully and 47% constituted monocultures. It is noteworthy, however, that some groups could not be isolated, as for example colonial cyanobacteria, chrysophytes, euglenophytes, desmids, or dinoflagellates, and some species such as Cryptomonas sp. were very sensitive to the sorting process. It is proposed that flow cytometric analysis of freshwater phytoplankton might be a relevant tool for water managers and could be applied in some specific cases, such as early monitoring of blooming taxa or basic bio-monitorings of key species. The higher isolation average obtained from the flow sorting can also be powerful for the physiological or molecular study of some taxa after their cultivation.     

Photophysiology and primary production of phytoplankton in freshwater

In the last 10 years enormous progress has been made in developing new instruments to collect physiological data from natural phytoplankton. In this review we summarize the motivation which has powered this engagement and focus on new technologies used to measure fluorescence, absorption and biochemical compositions of natural phytoplankton cells from nature. Combining the knowledge of phytoplankton structure along with taxon-specific measurements of photosynthetic activity and biochemical cell composition, can lead to new models which increase the reliability of water quality prediction. Furthermore, recent progress in the analysis of photophysiological fitness of phytoplankton cells has revealed new knowledge about the phylogenetic diversity of metabolic strategies to cope with light and nutrient stress. Future progress in single cell analysing systems will be discussed.     

The composition and abundance of phytoplankton in Lake Bukoni,western Uganda

Lake Bukoni is one of the crater lakes in western Uganda. Investigations into this lake is limited compared to other African lakes. Data on phytoplankton ecology in the lake are lacking. Phytoplankton consists of a community of photosynthetic, microscopic plants adapted to suspension in water. They constitute ‘hidden flora’ which make an important contribution to the primary productivity of a water mass. Some phytoplankton taxa, among them species belonging to Cyanophyta, are known to influence ecological transformations and to cause health hazards in water bodies that are used by humans. From July 2004 to December 2005, phytoplankton was collected from two sites (inshore and offshore) in Lake Bukoni. An inverted microscope, Sedgwick counting chamber and multiple tally denominator were used to quantify the phytoplankton. Phytoplankton was dominated by nonheterocystous cyanoprokaryotes especially Lyllgbya limnetica followed by the diatoms Synedra ulna and Fragillaria mutabilis. The inshore site had more phytoplankton species. Differences in phytoplankton diversity and density were mainly attributed to mixing and presence of macrophytes. The occurrence of large numbers of cyanoprokaryotes poses a potential health hazard to the local people who utilize the water from Lake Bukoni. The dominance of cyanoprokaryotes might result in ecological transformations like loss of biodiversity.     

飞来峡水库蓄水初期浮游植物组成与数量的变化

于2000~2002年的丰水期和枯水期对飞来峡水新建后库的营养状态和浮游植物进行监测。结果表明,水库中氮盐的浓度无显著变化,总磷浓度下降显著。浮游植物优势种类和丰度有较大差异。2000年浮游植物种类为29种,2001和2002年增加到99种;其中以绿藻和硅藻增加的种类数最多,分别增加34和27种。浮游植物丰度为13.4×104~41.6×104cells.L-1,2000年最高,2001年最低。2000年丰水期优势种较为单一,主要以假鱼腥藻(Pseudoanbeanaspp.)为主,枯水期主要是硅藻中的颗粒直链藻(Melosira granulata)丰度较高;2001和2002年丰水期蓝藻、绿藻和硅藻共同占优势,浮游植物无绝对的优势种,蓝藻的相对丰度较高的为假鱼腥藻、蓝纤维藻(Dactylococcopsis acicularis)和粘球藻(Gloeocapsa magma),绿藻的优势种为衣藻(Chlamydomonassp.)和美丽胶网藻(Dictyospharium pul-chellum);硅藻的优势种为梅尼小环藻(Cyclotella menighiniana)和针杆藻(Synedraspp.),枯水期主要是硅藻占优势,优势种为颗粒直链藻、变异直链藻(Melosira varians)等。     

Distribution, abundance, and roles of freshwater clams (Bivalvia, Unionidae) in the freshwater tidal Hudson River

1. An extensive series of PONAR grabs was used to determine the distribution and abundance of unionid clams in the freshwater tidal Hudson River. 2. The five species of unionids collected were distributed very unevenly within the river. Mean river-wide density and biomass of unionids were 8.0m^?2 and 6.2 g DM m^?2 (shell-free)., respectively. 3. The environmental variables that we measured (water depth, distance from shore, sediment granulometry and organic content, presence or absence of macrophytes, and the chlorophyll a and particulate organic matter content of the water) explained little of the variation in abundance of unionids. 4. The distributions of the various species of clams did not differ significantly with respect to the environmental variables measured. 5. We estimate that unionids filter a significant amount of water (0.14m³ m^?2 day^?1, on average) in the Hudson River estuary, roughly equivalent in magnitude to downstream flushing. 6. We project that unionids will serve as a major substratum for the settlement of the zebra mussel (Dreissena polymorpha), which is now invading the estuary. We emphasize that unionids may play important non-trophic roles in large river ecosystems.     

Parasites and phytoplankton, with special emphasis on dinoflagellate infections

Planktonic members of most algal groups are known to harbor intracellular symbionts, including viruses, bacteria, fungi, and protozoa. Among the dinoflagellates, viral and bacterial associations were recognized a quarter century ago, yet their impact on host populations remains largely unresolved. By contrast, fungal and protozoan infections of dinoflagellates are well documented and generally viewed as playing major roles in host population dynamics. Our understanding of fungal parasites is largely based on studies for freshwater diatoms and dinoflagellates, although fungal infections are known for some marine phytoplankton. In freshwater systems, fungal chytrids have been linked to mass mortalities of host organisms, suppression or retardation of phytoplankton blooms, and selective effects on species composition leading to successional changes in plankton communities. Parasitic dinoflagellates of the genus Amoebophrya and the newly described Perkinsozoa, Parvilucifera infectans, are widely distributed in coastal waters of the world where they commonly infect photosynthetic and heterotrophic dinoflagellates. Recent work indicates that these parasites can have significant impacts on host physiology, behavior, and bloom dynamics. Thus, parasitism needs to be carefully considered in developing concepts about plankton dynamics and the flow of material in marine food webs.     

Micronutrient and phosphorus limitation of phytoplankton abundance in Gem Lake,Sierra Nevada,California

Nutrient addition experiments conducted during the ice-free seasons of 1983 and 1984 in Gem Lake, an alpine lake in the Sierra Nevada mountains of California, indicate that algal biomass is limited by phosphorus, in combination with iron or copper. Phosphorus additions were always required to stimulate growth, but did not do so when phosphorus was the only nutrient added. Simultaneous additions of phosphorus and iron resulted in increased levels of chlorophyll, particulate carbon, particulate nitrogen and particulate phosphorus. Simultaneous additions of phosphorus and copper resulted in increases in chlorophyll, particulate nitrogen and particulate phosphorus, not in particulate carbon. Neither iron nor copper by itself stimulated growth.Particulate N : P ratios from all seasons in Gem Lake suggest that simultaneous micronutrient and phosphorus limitation exists throughout the summer, when nutrient and biomass levels remain low; limitation by phosphorus alone may appear in the fall and spring, when biomass and major ion concentrations increase dramatically.     

Counterimmunoelectrophoresis and opportunistic fungal infections

Sera from 35 apparently normal humans, 37 compromised human patients, 30 hedgehogs and 30 sheep, were examined for precipitating antibodies to four opportunistic fungi — Absidia corymbifera, Aspergillus fumigatus, Candida albicans and Rhizopus arrhizus — using Counterimmunoelectrophoresis (CIE).Precipitins to A. fumigatus were almost exclusively confined to specimens obtained from the compromised human group (51% of those examined) while Candida precipitating antibodies were detected in the sera of both normal (26%) and compromised (49%) humans and in 10% of the hedgehog specimens. Serum precipitins against the two phycomycetes included in the investigations were rare.Because of the complexity of most fungal antigen extracts, it appears essential that sera be tested against a number of different antigen concentrations if CIE is to be used with confidence in fungal serology.     

Protein protein interactions, evolutionary rate, abundance and age

Background

Does a relationship exist between a protein's evolutionary rate and its number of interactions? This relationship has been put forward many times, based on a biological premise that a highly interacting protein will be more restricted in its sequence changes. However, to date several studies have voiced conflicting views on the presence or absence of such a relationship.

Results

Here we perform a large scale study over multiple data sets in order to demonstrate that the major reason for conflict between previous studies is the use of different but overlapping datasets. We show that lack of correlation, between evolutionary rate and number of interactions in a data set is related to the error rate. We also demonstrate that the correlation is not an artifact of the underlying distributions of evolutionary distance and interactions and is therefore likely to be biologically relevant. Further to this, we consider the claim that the dependence is due to gene expression levels and find some supporting evidence. A strong and positive correlation between the number of interactions and the age of a protein is also observed and we show this relationship is independent of expression levels.

Conclusion

A correlation between number of interactions and evolutionary rate is observed but is dependent on the accuracy of the dataset being used. However it appears that the number of interactions a protein participates in depends more on the age of the protein than the rate at which it changes.     

Warming and oligotrophication cause shifts in freshwater phytoplankton communities

While there is a lot of data on interactive effects of eutrophication and warming, to date, we lack data to generate reliable predictions concerning possible effects of nutrient decrease and temperature increase on community composition and functional responses. In recent years, a wide‐ranging trend of nutrient decrease (re‐oligotrophication) was reported for freshwater systems. Small lakes and ponds, in particular, show rapid responses to anthropogenic pressures and became model systems to investigate single as well as synergistic effects of warming and fertilization in situ and in experiments. Therefore, we set up an experiment to investigate the single as well as the interactive effects of nutrient reduction and gradual temperature increase on a natural freshwater phytoplankton community, using an experimental indoor mesocosm setup. Biomass production initially increased with warming but decreased with nutrient depletion. If nutrient supply was constant, biomass increased further, especially under warming conditions. Under low nutrient supply, we found a sharp transition from initially positive effects of warming to negative effects when resources became scarce. Warming reduced phytoplankton richness and evenness, whereas nutrient reduction at ambient temperature had positive effects on diversity. Our results indicate that temperature effects on freshwater systems will be altered by nutrient availability. These interactive effects of energy increase and resource decrease have major impacts on biodiversity and ecosystem function and thus need to be considered in environmental management plans.     

The diversity,abundance and fate of ice algae and phytoplankton in the Bering Sea

Despite being an essential part of the marine food web during periods of ice cover, sea ice algae have not been studied in any detail in the Bering Sea. In this study, we investigated the diversity, abundance and ultimate fate of ice algae in the Bering Sea using sea ice, water and sub-ice sediment trap samples collected during two spring periods in 2008 and 2009: ice growth (March–mid-April) and ice melt (mid-April–May). The total ice algal species inventory included 68 species, dominated by typical Arctic ice algal diatom taxa. Only three species were determined from the water samples; we interpret the strong overlap in species as seeding of algal cells from the sea ice. Algal abundances in the ice exceeded 10⁷ cells l^?1 in the bottom 2-cm layer and were on average three orders of magnitude higher than in the water column. The vertical flux of algal cells beneath the ice during the period of ice melt (>10⁸ cells m^?2 day^?1) exceeded export during the ice growth period by one order of magnitude; the vertical flux during both periods can only be sustained by the release of algae from the ice. Differences in the relative species proportions of algae among sample types indicated that the fate of the released ice algae was species specific, with some taxa contributing to seeding in the water column, while other taxa were preferentially exported.     

Hypothesis: the rate and scale of dispersal of freshwater diatom species is a function of their global abundance

We have analysed the geographical records of a representative selection of extant diatom species from a freshwater pond. The more often a species is recorded in the ecological literature, the greater is its apparent global distribution. One explanation is that the frequently recorded species are globally abundant, whereas species that are infrequently recorded are globally rare. We suggest a model in which random dispersal is the dominant force driving large-scale distribution of species, with the rate and scale of dispersal largely determined by global population size. Thus species that are locally rare or abundant are likewise rare or abundant worldwide. It is predicted that many of the rarer diatom species will, with additional sampling effort, be shown to have wide geographical distribution, but this requires intensive studies focused on revealing species that are normally cryptic. The argument in favour of endemic diatom species is untenable, because it is not possible to disprove their existence elsewhere in the biosphere.     

Response of cyanobacteria and phytoplankton abundance to warming,extreme rainfall events and nutrient enrichment

Cyanobacterial blooms are an increasing threat to water quality and global water security caused by the nutrient enrichment of freshwaters. There is also a broad consensus that blooms are increasing with global warming, but the impacts of other concomitant environmental changes, such as an increase in extreme rainfall events, may affect this response. One of the potential effects of high rainfall events on phytoplankton communities is greater loss of biomass through hydraulic flushing. Here we used a shallow lake mesocosm experiment to test the combined effects of: warming (ambient vs. +4°C increase), high rainfall (flushing) events (no events vs. seasonal events) and nutrient loading (eutrophic vs. hypertrophic) on total phytoplankton chlorophyll‐a and cyanobacterial abundance and composition. Our hypotheses were that: (a) total phytoplankton and cyanobacterial abundance would be higher in heated mesocosms; (b) the stimulatory effects of warming on cyanobacterial abundance would be enhanced in higher nutrient mesocosms, resulting in a synergistic interaction; (c) the recovery of biomass from flushing induced losses would be quicker in heated and nutrient‐enriched treatments, and during the growing season. The results supported the first and, in part, the third hypotheses: total phytoplankton and cyanobacterial abundance increased in heated mesocosms with an increase in common bloom‐forming taxa—Microcystis spp. and Dolichospermum spp. Recovery from flushing was slowest in the winter, but unaffected by warming or higher nutrient loading. Contrary to the second hypothesis, an antagonistic interaction between warming and nutrient enrichment was detected for both cyanobacteria and chlorophyll‐a demonstrating that ecological surprises can occur, dependent on the environmental context. While this study highlights the clear need to mitigate against global warming, oversimplification of global change effects on cyanobacteria should be avoided; stressor gradients and seasonal effects should be considered as important factors shaping the response.     

Exogenous and endogenous increase in fungal GGPP increased fungal Taxol production

Applied Microbiology and Biotechnology - Taxol is an anticancer identified in both endophytic fungus and its host plant. Plant Taxol is a diterpenoid with geranylgeranyl diphosphate (GGPP) mediates...     

海洋浮游植物丰度的空间插值优化

在探索性空间数据分析(Exploratory spatial data analysis)和数据转化的基础上,利用反距离加权(Inverse distance weighting,IDW)、径向基函数(Radial basis functions,RBF)、普通克里格(Ordinary Kriging,OK),3种插值方法,对2003年8月获得的珠江口浮游植物丰度数据进行插值运算,并对插值准确度进行交叉验证。结果显示,珠江口浮游植物丰度数据具有离散性大、存在极大和极小值、呈正偏分布等特点。而对数转化能大大减小数据的离散性和不对称性,有效消除插值结果图中各类插值噪音。交叉验证显示,插值精确度OK最高,RBF次之,IDW最低。观察插值结果等值面图,发现3种方法均能较客观地模拟出浮游植物丰度的总体分布趋势,在对局部趋势的模拟上,OK的表现最好。综合评定,OK为最适合珠江口浮游植物丰度数据的插值方法。半变异模型的选择对OK的插值结果影响不明显。在四种半变异模型中,圆形模型的拟合效果最好。