Allelochemicals released by rice roots and residues in soil

A few rice (Oryza sativa L.) varieties or rice straw produce and release allelochemicals into soil in which interfere with the growth of neighboring or successive plants. Allelopathic rice PI312777 and Huagan-1 at their early growth stages released momilactone B, 3-isopropyl-5-acetoxycyclohexene-2-one-1, and 5,7,4′-trihydroxy-3′,5′-dimethoxyflavone into soil at phytotoxic levels, but non-allelopathic rice Huajingxian did not. Both allelopathic and non-allelopathic rice residues released momilactone B and lignin-related phenolic acids (p-hydroxybenzoic, p-coumaric, ferulic, syringic and vanillic acids) into the soil during residue decomposition to inhibit successive plants. The results indicated that allelochemicals involved in rice allelopathy from living and dead plants are substantially different. Interestingly, the concentrations of the allelochemicals released from the allelopathic rice seedlings in soil increased dramatically when they were surrounded with Echinochloa crus-galli. The concentrations of the allelochemicals were over 3-fold higher in the presence of E. crus-galli than in the absence of E. crus-galli. However, the same case did not occur in non-allelopathic Huajingxian seedlings surrounded with E. crus-galli. In addition to allelochemical exudation being promoted by the presence of E. crus-galli, allelopathic rice seedlings also increased allelochemical exudation in response to exudates of germinated E. crus-galli seeds or lepidimoide, an uronic acid derivative exuded from E. crus-galli seeds. These results imply that allelopathic rice seedlings can sense certain allelochemicals released by E. crus-galli into the soil, and respond by increased production of allelochemicals inhibitory to E. crus-galli. This study suggests that rice residues of both allelopathic and non-allelopathic varieties release similar concentrations and types of allelochemicals to inhibit successive plants. In contrast, living rice plants of certain allelopathic varieties appear to be able to detect the presence of interspecific neighbors and respond by increased allelochemicals.     

Anaerobic Metabolism in Germinating Seeds of Echinochloa crus-galli (Barnyard Grass) : METABOLITE AND ENZYME STUDIES

Echinochloa crus-galli, a problem weed in rice fields, has the rare ability to germinate and to grow in a totally oxygen-free environment. After 7 days growth in the light or dark under N₂, E. crus-galli var. oryzicola produces a 2- to 3-centimeter nonpigmented shoot.     

Crop mimicry in weeds

The selective forces imposed by agricultural practices have resulted in the evolution of agricultural races of weeds or agroecotypes. Some agroecotypes are intimately associated with a specific crop. Such associations can involve a system of mimicry, whereby the weed resembles the crop at specific stages during its life history and, as a result of mistaken identity, evades eradication. Mimetic forms of weeds are most likely to be selected by handweeding of seedlings or by harvesting and seed cleaning procedures. A striking example of morphological and phenological resemblance is found in the cultivated rice mimic,Echinochloa crus-galli var.oryzicola, a native of Asian rice fields but now widely distributed in rice-growing areas of the world. Comparative studies of the growth, devel-opment and patterns of phenotypic variation of cultivated rice,E. crus-galli var.oryzicola andE. crus-galli var.crus-galli demonstrate that the crop mimic is more similar to rice in many attributes than it is to its close relative. It is proposed that intense handweeding practices in Asia constitute the main selective force favoring the evolution of rice mimicry inE. crus-galli var.oryzicola.     

Effects of anoxia on root ultrastructure of four neotropical trees

Summary. The root ultrastructure of seedlings grown in anaerobic conditions was investigated in four neotropical species: Sesbania virgata, Erythrina speciosa, Sebastiania commersoniana (all present in waterlogged or flooded areas), and Schizolobium parahyba (that occupies mainly dry areas). Anaerobiosis induced an increase in the size of mitochondria, dilatation of cristae and of the endoplasmic reticulum, and fragmentation or concentric arrangement of reticulum saccules. The ultrastructural alterations were reversible only for S. virgata and E. speciosa. The seedlings of S. parahyba and S. commersoniana were more sensitive to oxygen deprivation and presented extensive cell disruption. The results are discussed in terms of energy supply.Correspondence and reprints (present address): Departamento de Biologia Animal e Vegetal, Centro de Ciências Biológicas, Universidade Estadual de Londrina, P.O. Box 6001, 86051-970, Londriná, Paraná, Brazil.     

Activities of isolated mitochondria and mitochondrial enzymes from aerobically and anaerobically germinated barnyard grass (echinochloa) seedlings

Activity of mitochondria isolated from whole seedlings of Echinochloa crus-galli (L.) Beauv. var oryzicola germinated under aerobic and anaerobic conditions for 5 to 7 days was investigated. Mitochondria from both treatments exhibited good respiratory control and ADP/O ratios. Although O₂ uptake was low in anaerobic mitochondria, activity rapidly increased when the seedlings were transferred to air. Mitochondria from both aerobically and anaerobically grown seedlings of E. crus-galli var oryzicola maintained up to 66% of their initial respiration rate in the presence of both cyanide and salicylhydroxamic acid, and the inhibitory effects of cyanide and azide were additive. In addition, antimycin A was not an effective inhibitor of respiration. Reduced-minus-oxidized absorption spectra revealed that cytochromes a, a₃, and b were reduced to a greater extent and cytochrome c was reduced to a lesser extent in anaerobically germinated seedlings relative to that in aerobically germinated seedlings. An absorption maximum in the cytochrome d region of the spectrum was reduced to the same extent under both germination conditions and an absorption maximum at 577 nm was present only in anaerobically germinated seedlings. Anaerobically germinated seedlings contained 70% of the cytochrome c oxidase activity found in air grown seedlings. Upon exposure to air, the developmental pattern of this enzyme in anaerobically germinated seedlings was similar to air controls. Succinate dehydrogenase activity in anaerobic seedlings was only 45% of the activity found in aerobically germinated seeds, but within 1 hour of exposure to air, the activity had increased to control levels. The results suggest that mitochondria isolated from E. crus-galli var oryzicola differ from other plants studied and that the potential for mitochondrial function during anaerobiosis exists.     

Isolation and identification of a potent allelopathic substance in Bangladesh rice

Aqueous methanol extracts of Bangladesh rice (Oryza sativa L. cv. BR17) inhibited the growth of roots and shoots of cress (Lepidium sativum), lettuce (Lactuca sativa), alfalfa (Medicago sativa), timothy (Phleum pratense), Digitaria sanguinalis, Echinochloa crus-galli and Echinochloa colonum. Increasing the extract concentration increased the inhibition, suggesting that the BR17 may have growth inhibitory substances and possess allelopathic potential. The aqueous methanol extract of the BR17 was purified and a main inhibitory substance was isolated and determined by spectral data as 2,9-dihydroxy-4-megastigmen-3-one. This substance inhibited root and shoot growth of cress and E. crus-galli seedlings at concentrations greater than 0.03 and 3 μM, respectively. The concentrations required for 50% growth inhibition on cress roots and shoots were 0.22 and 0.47 μM, respectively, and on E. crus-galli roots and shoots were 36 and 133 μM, respectively. These results suggest that 2,9-dihydroxy-4-megastigmen-3-one may contribute to the growth inhibitory effect of BR17 and may play an important role in the allelopathy of BR17. Thus, Bangladesh rice BR17 may be potentially useful for weed management in a field setting. An erratum to this article can be found at     

Fine-scale spatial heterogeneity and seed size determine early seedling survival in a desert perennial shrub (<Emphasis Type="Italic">Ericameria nauseosa:</Emphasis> Asteraceae)

In heterogenous landscapes, seeds settle in some microsites more readily than others, independently of whether those microsites are suitable for germination and subsequent growth, and survival of seedlings. Wild seeds and seedlings of Ericameria nauseosa var. oreophila in the sand-dune ecosystem near Mono Lake, California show both concordance and conflict in where seeds are retained and where seedlings flourish. Using a field experiment, we followed performance of seeds and seedlings (i.e., the rate of germination and successful emergence, initial seedling size, seedling growth and survival over first growing season), by planting seeds of known sizes in pre-identified microsites (windward and lee aspects of interspaces between shrubs, under shrub canopies, and under snag canopies, respectively). Heavier seeds were more likely to germinate and emerge successfully and resulted in initially larger seedlings than lighter seeds. These initially larger seedlings subsequently remained larger over the growing season and lived longer than initially smaller seedlings. Independent of seed and initial seedling size, seedlings that germinated under the canopy of adult shrubs grew larger and survived longer than seedlings that germinated in interspaces (open space with little or no vegetation) or under snags (dead adult shrubs). Seedlings grown under the canopy of adult shrubs experienced significantly less solar radiation and wind-deposited sand than seedlings grown in interspace or snag microsites. Sand burial more than 1 cm was lethal for seedlings. The two variables of seed size and microsite type had by far greater impact on eventual growth and survival of seedlings than did aspect, and the effects of the former two variables were independent of each other. This study amplifies the body of work on E. nauseosa at this site demonstrating that the earliest events in the life history of this long-lived perennial shrub appear to persist through time despite the harsh and variable environment.     

ABA and IAA in rice seedlings under anaerobic conditions

The rice is important in plant science for its ability to germinate and grow with restricted or without oxygen availability. In this work we have investigated the variation of growth substances when anoxia was imposed to rice seedlings previously grown in air. An increase, in all the organs of a seedling and in particular in the fraction released in the medium, was observed for ABA (abscisic acid), PA (phaseic acid) and DPA (dihydrophaseic acid) quantities.Vice versa a reduction of total IAA (indol-3-ylacetic acid) was observed in seedlings. This was accompanied by its accumulation in roots. IAA was poorly released in aerobic conditions and anoxia has not changed this pattern.     

Growth and allocation of the arctic sedges Eriohorum angustifolium and E. vaginatum: effects of variable soil oxygen and nutrient availability

In arctic tundra soil, oxygen depletion associated with soil flooding may control plant growth either directly through anoxia or indirectly through effects on nutrient availability. This study was designed to evaluate whether plant growth and physiology of two arctic sedge species are more strongly controlled by the direct or indirect effects of decreased soil aeration. Eriophorum angustifolium and E. vaginatum, which originate from flooded and well-drained habitats, respectively, were grown in an in situ transplant garden at two levels of soil oxygen, nitrogen, and phosphorus availability over two growing seasons. In both species, N addition had a stronger effect on growth and biomass allocation than P addition or soil oxygen depletion. Net photosynthesis and carbohydrate concentrations were relatively insensitive to changes in these factors. Biomass reallocated from shoots to below-ground parts in response to limited N supply was equally divided between roots (nutrient acquisition) and perennating rhizomes (storage tissue formation) in E. angustifolium. E. Vaginatum only increased its allocation to rhizomes. In the flood-tolerant E. angustifolium, growth was improved by soil anoxia and biomass allocation among plant parts was not significantly affected. Contrary to our initial hypothesis, whole-plant growth in E. vaginatum improved in flooded soils; however, it only did so when N availability was high. Under low N availability growth in flooded soils was reduced by 20% compared to growth in the aerobic environment. Reduced biomass allocation to rhizomes and thus to storage potential under anaerobic conditions may reduce long-term survival of E. vaginatum in flooded habitats.     

ENDOMYCORRHIZAE INFLUENCE GROWTH OF BLACKGUM SEEDLINGS IN FLOODED SOILS

Nyssa sylvatica seedlings grown for a year under flooded conditions established endomycorrhizal associations with Glomus mosseae. Lowland ecotypes with endomycorrhizae showed a significant increase in biomass over non-mycorrhizal controls; the greatest difference was in aboveground biomass. Upland ecotypes survived flooding poorly and established fewer endomycorrhizae than lowland ecotypes and did not show any enhanced growth over controls. In general, most endomycorrhizae were formed near main roots and significantly decreased in abundance with distance from the main axes of the root system. It is suggested that under flooded conditions internal oxygen transport may be limiting to mycorrhizae in the more distal roots.     

Effects of Capsaicin on Plant Growth

Rice (Oryza sativa L.) seedlings inhibited the growth of hypocotyls and roots of cress (Lepidium sativum L.) seedlings when both seedlings were grown together. Two growth inhibiting substances were found in the culture solution in which rice seedlings were hydroponically grown for 14 d. One growth inhibitor was further purified. This suggests that the rice seedlings may produce growth inhibiting substances, acting as allelochemicals to other plants, and release them from their roots into the environment.     

Effects of o(2) concentration on rice seedlings

The ability of rice, wheat, and oat seedlings to germinate and grow as the O₂ concentration was lowered to zero was compared. The germination of rice was completely unaffected by O₂ supply, whereas that of oats and wheat was strongly retarded at levels below 5% O₂. In contrast to the coleoptiles of oats and wheat and to roots of all three species where growth was progressively diminished as the O₂ concentration was lowered, that of the rice coleoptile was progressively increased. However, the dry weight and content of protein, sugars, and cellulose were all depressed in the rice coleoptile in anoxia, and the levels of several respiratory enzymes, particularly those of mitochondria, were also much lower than those of the coleoptiles grown in air. In 1% O₂, the growth of the rice coleoptile was similar to that in air. The effect of ethanol concentration on germination and growth of rice was measured. Coleoptile growth was reduced when the ethanol concentration exceeded 40 millimolarity, and root growth was somewhat more sensitive. Coleoptiles of all three species grown in air were transferred to N₂, and ethanol accumulation was measured over 24 hours. The rate of ethanol accumulation in oats was close to that in rice, and in all three species the amounts of ethanol lost to the surrounding medium were those expected from simple diffusion from the tissue. The ability of the rice coleoptile to grow in anoxia is apparently not due to a particularly low rate of ethanol formation or to unusual ethanol tolerance. Any explanation of the success of rice in anoxia must encompass the much lower rate of ATP synthesis than that in air and account for the biochemical deficiencies of the coleoptile.     

GERMINATION AND SEEDLING GROWTH IN ECHINOCHLOA CRUS-GALLI VAR. ORYZICOLA UNDER ANOXIC CONDITIONS: STRUCTURAL ASPECTS

The morphological and cellular basis of anoxic germination in Echinochloa crus-galli var. oryzicola is reported. The embryo of E. crus-galli var. oryzicola is typically panicoid in its overall morphology, and is relatively large with a prominent coleoptile and mesocotyl. The response to anoxia is essentially the same in light and dark. Shoot growth occurs in both mesocotyl and coleoptile by cell elongation with no cell division. There is no emergence of the radicle without oxygen. Under anoxia the growth response is not the same as etiolation; there is no plumule elongation within the coleoptile, no protochlorophyll(ide) is found, and limited mesocotyl elongation occurs without oxygen. Air-dark treatment after anoxic germination results in a typical etiolated morphological response, including a resumption of mesocotyl growth, elongation of the plumule within the coleoptile, and initiation of pigment synthesis. These results indicate the effects of anoxia are not permanent but rather limiting and reversible.     

Microalgae Improve the Photosynthetic Performance of Rice Seedlings (<i>Oryza sativa</i> L.) under Physiological Conditions and Cadmium Stress

The aim of this study was to assess the impact of the microalgae Chlorella vulgaris on the rice seedlings at physiological conditions and under cadmium (Cd) stress. We examined the effects of C. vulgaris in the nutrient solution on rice seedlings grown hydroponically in the presence and the absence of 150 μM CdCl₂, using the low (77 K) temperature and pulse amplitude modulated (PAM) chlorophyll fluorescence, P700 photooxidation measurements, photochemical activities of both photosystems, kinetic parameters of oxygen evolution, oxidative stress markers (MDA, H₂O₂ and proline), pigment content, growth parameters and Cd accumulation. Data revealed that the application C. vulgaris not only stimulates growth and improves the functions of photosynthetic apparatus under physiological conditions, but also reduces the toxic effect of Cd on rice seedlings. Furthermore, the presence of the green microalgae in the nutrient solution of the rice seedlings during Cd exposure, significantly improved the growth, photochemical activities of both photosystems, the kinetic parameters of the oxygen-evolving reactions, pigment content and decreased lipid peroxidation, H₂O₂ and proline content. Data showed that the alleviation of Cd-induced effects in rice seedlings is a result of the Cd sorption by microalgae, as well as the reduced Cd accumulation in the roots and its translocation from the roots to the shoots.     

Salinity and waterlogging tolerance of some populations of Melaleuca ericifolia Smith

Seed germination of Melaleuca ericifolia (swamp paperbark) is delayed by submergence in water but the final percentage germination after removing seeds from water is unaffected; some seeds will germinate and the cotyledons emerge whilst submerged. Germination is totally inhibited at salinities of 14% and a population which naturally occurs adjacent to coastal saltmarsh was inhibited more by salinities of 6–12% than two other populations from freshwater habitats. Seedling growth may be increased by water-logging conditions and the degree of response differs for different seed sources. Inundation stimulates root growth and new roots are thick and aerenchymatous. Root systems in the field run horizontally and are shallow, apparently being restricted by clay at depth. All populations studied showed a similar seedling growth-response to salinity treatments; growth declined at salinities ≤ 13% and was severely restricted at 21%, although no seedlings died after 48 days’exposure to the latter treatment.     

Calcium peroxide as a seed coating material for padi rice

Summary Measurement of oxygen uptake by germinating rice seed (Oryza sativa L) suggests that oxygen requirement is independent of temperature of incubation. However, the rate of oxygen consumption is dependent upon incubation temperature and, after an initial lag phase, is exponential with time. Although rice seed can germinate and grow at low oxygen concentrations, germination is poor and seedlings exhibit low vigour. An oxidized zone may be observed around the seed when sown in an anoxic environment but coated with a layer of calcium peroxide. The seed germinates readily and develops normally when a sufficient level of calcium peroxide is used.     

Abscisic acid promotes lectin biosynthesis in developing and germinating rice embryos

Immature rice (Oryza sativa, L) embryos isolated about 12 days post anthesis are fully able to develop into young seedlings when cultured in vitro. Concomitantly, they rapidly loose their lectin synthesis activity. Abscisic acid added to the nutrient medium prevents precocious germination of the immature embryos and simultaneously strongly promotes lectin biosynthesis activity. Similarly, abscisic acid keeps mature embryos grown in a nutrient medium in a dormant state and maintains their lectin synthesis activity, whereas control embryos rapidly germinate but also quickly loose their lectin synthesis activity. It appears, therefore, that rice lectin is typically synthesized in embryos which are kept in a dornant state.Abbreviations ABA abscisic acid - GA₃ gibberellic acid - WGA wheat germ agglutinin - DPA days post anthesis     

Flavonoids and Growth Hormones Influence Endophytic Colonization and in Planta Nitrogen Fixation by a Diazotrophic Serratia sp. in Rice

Summary Several endophytic diazotrophs were isolated from cultivars of rice and screened for their diazotrophy by nitrogenase assay and amplification of partial nifH gene. Ability of one of the diazotrophic endophytes, Serratia sp. (isolate EDA2 from cultivar ADT36) to colonize the rice seedlings grown in the presence of flavonoids and growth hormones, under gnotobiotic condition was assessed in cultivar ADT36 using a strain marked with transposon-based egfp and Km ^r . The endophytic colonization was monitored through re-isolation from different parts of rice seedlings in LB+Km plates. Addition of the flavonoids quercetin and diadzein to the growth medium increased the extent of endophytic colonization of the conjugant in rice seedlings by colonizing throughout the plant. Population and in planta nitrogenase activity of Serratia in rice seedlings were significantly increased by addition of flavonoids, quercetin and diadzein, whereas growth hormones, IAA and NAA reduced the efficiency of Serratia. The inoculation of Serratia sp. with flavonoids increased the plant biomass and biochemical constituents of rice seedlings under controlled condition.     

Mitochondrial enzymes in aerobically and anaerobically germinated seedlings of Echinochloa and rice

Activities of tricarboxylic acid (TCA) cycle enzymes in seedlings of barnyard grass (Echinochloa phyllopogon (Stapf.) Koss) and rice (Oryza sativa L.) germinated under aerobic and anaerobic conditions were investigated. In E. phyllopogon, development of TCA-cycle enzyme activities during 10 d of anoxia generally paralleled those in air, although at lower rates. After 5 d, E. phyllopogon seedlings germinating under N₂ exhibited 50–80% of the activity of seedlings grown in air, except for 2-oxoglutarate dehydrogenase (EC 1.2.4.2) and fumarate reductase (EC 1.3.1.6) which exhibited only 25–35% of aerobic activity. In anaerobically germinated rice, development of TCA-cycle enzyme activities also paralleled those in air except for aconitase (EC 4.2.1.3), isocitrate dehydrogenase (EC 1.1.1.41), and 2-oxoglutarate dehydrogenase. Those enzymes did not increase in activity under anoxia. Development of maximum enzyme activities generally occurred more rapidly and persisted longer in E. phyllopogon compared to rice. The data indicate that mitochondria of E. phyllopogon function better during anaerobiosis than those of rice and this factor may contribute to the successful biochemical strategy of this weed in rice paddies throughout the world.Abbreviation TCA tricarboxylic acid This work was supported by U.S. Department of Agriculture Competitive Research grant No. 87-CRCR1-2595 and a Herman Frasch Foundation grant in Agricultural Chemistry to R.A.K.     

Anaerobiosis in Echinochloa crus-galli (Barnyard Grass) Seedlings : Intermediary Metabolism and Ethanol Tolerance

Tolerance to ethanol and the ability to metabolize key intermediary substrates under anaerobiosis were studied in Echinochloa crus-galli (L.) Beauv. var oryzicola seeds to further characterize the mechanisms which enable it to germinate and grow without O₂.

Our results indicate that E. crus-galli var oryzicola possesses an inherently high tolerance to ethanol and is able to metabolize low levels of ethanol in the absence of O₂. Concentrations of ethanol 45-fold greater than endogenous levels did not prove toxic to germinating seeds.

Five-day anaerobically grown seedlings of E. crus-galli var oryzicola metabolized added [¹⁴C]sucrose primarily to CO₂ and ethanol. Of the soluble compounds labeled, the phosphorylated intermediates of glycolysis and the oxidative pentose phosphate pathway predominated more under anaerobiosis than in air. In addition, organic acids and lipids were labeled from [¹⁴C]sucrose, the latter indicating that metabolism of carbohydrate via acetyl-CoA occurred in the absence of O₂. Lipids were also labeled when seeds were supplied with [¹⁴C]ethanol or [¹⁴C]acetate. Labeling experiments using the above compounds plus [¹⁴C]NaHCO₃, showed further labeling of organic acids; succinate and citrate being labeled under nitrogen, while fumarate was formed in air.

The above metabolic characteristics would allow for the maintenance of an active alcoholic fermentation system which, along with high alcohol dehydrogenase activity, would continue to recycle NAD and result in continued energy production without O₂. In addition, Echinochloa's ability to metabolize carbohydrate intermediates and to synthesize lipids indicates that mechanisms exist for providing the carbon intermediates for biosynthesis, particularly membrane synthesis for growth, even in the absence of O₂.